EP 2752487 A1 20140709 - Intracellular phenotypic screening
Title (en)
Intracellular phenotypic screening
Title (de)
Intrazelluläres Phänotypen-Screening
Title (fr)
Criblage phénotypique intracellulaire
Publication
Application
Priority
EP 13305003 A 20130103
Abstract (en)
The present invention relates to a method for identifying a cellular target involved in a cell phenotype comprising identifying an intrabody which can modify a cell phenotype and identifying a direct or indirect cellular target of the intrabody. The present invention also relates to intrabodies 3H2-1, 3H2-VH and 5H4 which are capable of inhibiting the degranulation reaction in mast cells triggered by an allergic stimulus, and especially to intrabodies 3H2-1 and 5H4 which are capable of directly or indirectly targeting a protein of the ABCF1 family and of the C12ORF4 family respectively. The present invention also relates to ABCF1 and C12ORF4 inhibitors for use in therapy, in particular for treating allergic and/or inflammatory conditions.
IPC 8 full level
C12N 15/10 (2006.01); G01N 33/50 (2006.01); G01N 33/68 (2006.01)
CPC (source: EP US)
C07K 16/00 (2013.01 - EP US); C07K 16/18 (2013.01 - US); G01N 33/5008 (2013.01 - EP US); G01N 33/5023 (2013.01 - US); G01N 33/6845 (2013.01 - EP US); G01N 33/6854 (2013.01 - EP US); C07K 2317/565 (2013.01 - US); C07K 2317/622 (2013.01 - EP US); C07K 2317/80 (2013.01 - EP US); G01N 2500/02 (2013.01 - US); G01N 2500/10 (2013.01 - US)
Citation (applicant)
- EP 1743178 B1 20100616 - CENTRE NAT RECH SCIENT [FR], et al
- JP 2008136455 A 20080619 - NAT INST OF ADV IND & TECHNOL
- WO 2008110914 A2 20080918 - INST NAT SANTE RECH MED [FR], et al
- DAUVILLIER S; MERIDA P; VISINTIN M; CATTANEO A; BONNEROT C; DARIAVACH P: "Intracellular Single-Chain Variable Fragments Directed to the Src Homology 2 Domains of Syk Partially Inhibit Fc?RI Signaling in the RBL-2H3 Cell Line", THE JOURNAL OF IMMUNOLOGY, vol. 169, 2002, pages 2274 - 2283, XP002284889
- DEMO SD; MASUDA E; ROSSI AB; THRONDSET BT; GERARD AL; CHAN EH; ARMSTRONG RJ; FOX BP; LORENS JB; PAYAN DG: "Quantitative measurement of mast cell degranulation using a novel flow cytometric annexin-V binding assay", CYTOMETRY, vol. 36, no. 4, 1999, pages 340 - 8, XP002978667, DOI: doi:10.1002/(SICI)1097-0320(19990801)36:4<340::AID-CYTO9>3.0.CO;2-C
- GENINI S; NGUYEN TT; MALEK M; TALBOT R; GEBERT S; ROHRER G; NONNEMAN D; STRANZINGER G; VÖGELI P: "Radiation hybrid mapping of 18 positional and physiological candidate genes for arthrogryposis multiplex congenita on porcine chromosome 5", ANIM GENET, vol. 37, no. 3, 2006, pages 239 - 44, XP055073411, DOI: doi:10.1111/j.1365-2052.2006.01447.x
- GUGLIELMI L; MARTINEAU P: "Antibody Phage Display", 2009, HUMANA PRESS, article "Expression of Single-Chain Fv Fragments in E. coli Cytoplasm", pages: 215 - 224
- INOUE A; SAWATA SY; TAIRA K; WADHWA R: "Loss-of-function screening by randomized intracellular antibodies : Identification of hnRNP-K as a potential target for metastasis", PNAS, vol. 104, no. 21, 2007, pages 8983 - 8988
- KABAT E.A.; WU,T.T.; PERRY,H.; GOTTESMAN,K.; FOELLER,C.: "Sequences of Proteins of Immunological Interest", 1991, NIH PUBLICATION NO. 91-3242.
- KONTERMANN R.E.; DÜBE! S.: "Antibody Engineering", vol. 2, 2010, SPRINGER PROTOCOLS
- LI J; TIBSHIRANI R: "Finding consistent patterns: A nonparametric approach for identifying differential expression in RNA-Seq data", STAT METHODS MED RES., 2011
- MAZUC E; VILLOUTREIX BO; MALBEC O; ROUMIER T; FLEURY S; LEONETTI JP; DOMBROWICZ D; DAERON M; MARTINEAU P; DARIAVACH P: "A novel druglike spleen tyrosine kinase binder prevents anaphylactic shock when administered orally", THE JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY, vol. 122, 2008, pages 188 - 194
- MOUTEL S; E! MARJOU A; VIELEMEYER O; NIZAK C; BENAROCH P; DUBEL S; PEREZ F: "A multi-Fc-species system for recombinant antibody production", BMC BIOTECHNOL, vol. 9, 2009, pages 14, XP021049459, DOI: doi:10.1186/1472-6750-9-14
- MUYLDERMANS, S.: "Single domain camel antibodies: current status", REVIEWS IN MOLECULAR BIOTECHNOLOGY, vol. 74, 2001, pages 277 - 302, XP008019929
- OTA M; KATSUYAMA Y; HAMANO H; UMEMURA T; KIMURA A; YOSHIZAWA K; KIYOSAWA K; FUKUSHIMA H; BAHRAM S; INOKO H: "Two critical genes (HLA-DRB1 and ABCF1) in the HLA region are associated with the susceptibility to autoimmune pancreatitis", IMMUNOGENETICS, vol. 59, no. 1, 21 November 2006 (2006-11-21), pages 45 - 52, XP019472477, DOI: doi:10.1007/s00251-006-0178-2
- PAYTUBI S; WANG X; LAM YW; IZQUIERDO L; HUNTER J; HUNDAL; PROUD C: "ABC50 Promotes Translation Initiation in Mammalian Cells", JOURNAL OF BIOLOGICAL CHEMISTRY, vol. 284, no. 36, 2009, pages 24061 - 73, XP055075157, DOI: doi:10.1074/jbc.M109.031625
- PAYTUBI S; MORRICE N; BOUDEAU J; PROUD C: "The N-terminal region of ABC50 interacts with eukaryotic initiation factorelF2 and is a target for regulatory phosphorylation by CK2", J.BIOCHEM, vol. 409, 2008, pages 223 - 231
- PAZOS F; VALENCIA A: "Similarity of phylogenetic trees as indicator of protein-protein interaction", PROTEIN ENG, vol. 14, no. 9, 2001, pages 609 - 14
- PERSIC L; RIGHI M; ROBERTS A; HOOGENBOOM HR; CATTANEO A; BRADBURY A: "Gene", vol. 187, 1997, article "Targeting vectors for intracellular immunisation", pages: 1 - 8
- PHILIBERT P; STOESSEL A; WANG W; SIBLER AP; BEC N; LARROQUE C; SAVEN JG; COURTETE J; WEISS E; MARTINEAU P: "A focused antibody library for selecting scFvs expressed at high levels in the cytoplasm", BMC BIOTECHNOLOGY, vol. 7, 2007, pages 81, XP021035664
- SHEVCHENKO A; TOMAS H; HAVLIS J; OLSEN JV; MANN M: "In-gel digestion for mass spectrometric characterization of proteins and proteomes", NAT. PROTOCOLS, vol. 1, 2007, pages 2856 - 2860
- STIJLEMANS B; CONRATH K; CORTEZ-RETAMOZO V; VAN XONG H; WYNS L; SENTER P; REVETS H; DE BAETSELIER P; MUYLDERMANS S; MAGEZ S: "Efficient Targeting of Conserved Cryptic Epitopes of Infectious Agents by Single Domain Antibodies", JOURNAL OF BIOLOGICAL CHEMISTRY, vol. 279, 2004, pages 1256 - 1261, XP002367544, DOI: doi:10.1074/jbc.M307341200
- TYZACK JK; WANG X; BELSHAM GJ; PROUD CG: "ABC50 interacts with eukaryotic initiation factor 2 and associates with the ribosome in an ATP- dependent manner", J. BIOL. CHEM., vol. 275, 2000, pages 34131 - 9, XP055048614, DOI: doi:10.1074/jbc.M002868200
- VILLOUTREIX BO; LACONDE G; LAGORCE D; MARTINEAU P; MITEVA MA; DARIAVACH P: "Tyrosine Kinase Syk Non-Enzymatic Inhibitors and Potential Anti-Allergic Drug-Like Compounds Discovered by Virtual and In Vitro Screening", PLOS ONE, vol. 6, 2011, pages E21117
Citation (search report)
- [XI] JP 2008136455 A 20080619 - NAT INST OF ADV IND & TECHNOL
- [XY] US 2006166284 A1 20060727 - LIGHT DAVID [US], et al
- [Y] WO 2008110914 A2 20080918 - INST NAT SANTE RECH MED [FR], et al
- [Y] US 2008009012 A1 20080110 - BIRMINGHAM AMANDA [US], et al
- [X] US 2011280862 A1 20111117 - CHEUNG SIU TIM [HK], et al
- [X] WO 03040296 A2 20030515 - DEVELOGEN AG [DE], et al
- [YD] PHILIBERT PASCAL ET AL: "A focused antibody library for selecting scFvs expressed at high levels in the cytoplasm", BMC BIOTECHNOLOGY, BIOMED CENTRAL LTD. LONDON, GB, vol. 7, no. 1, 22 November 2007 (2007-11-22), pages 81, XP021035664, ISSN: 1472-6750
- [Y] "C12orf4 siRNA (h): sc-95913", 24 February 2012 (2012-02-24), XP055073304, Retrieved from the Internet <URL:http://datasheets.scbt.com/sc-95913.pdf> [retrieved on 20130729]
Designated contracting state (EPC)
AL AT BE BG CH CY CZ DE DK EE ES FI FR GB GR HR HU IE IS IT LI LT LU LV MC MK MT NL NO PL PT RO RS SE SI SK SM TR
Designated extension state (EPC)
BA ME
DOCDB simple family (publication)
EP 2752487 A1 20140709; AU 2014204299 A1 20150730; CA 2896972 A1 20140710; CN 105358689 A 20160224; EP 2941486 A1 20151111; MX 2015008726 A 20160630; SG 11201505216V A 20150828; US 2015346192 A1 20151203; WO 2014106639 A1 20140710
DOCDB simple family (application)
EP 13305003 A 20130103; AU 2014204299 A 20140102; CA 2896972 A 20140102; CN 201480012115 A 20140102; EP 14700037 A 20140102; EP 2014050032 W 20140102; MX 2015008726 A 20140102; SG 11201505216V A 20140102; US 201414759193 A 20140102