EP 4147242 A2 20230315 - GENOME SEQUENCING AND DETECTION TECHNIQUES
Title (en)
GENOME SEQUENCING AND DETECTION TECHNIQUES
Title (de)
GENOMSEQUENZIERUNGS- UND -DETEKTIONSTECHNIKEN
Title (fr)
TECHNIQUES DE SÉQUENÇAGE ET DE DÉTECTION DE GÉNOME
Publication
Application
Priority
- US 202063022296 P 20200508
- US 2021031390 W 20210507
Abstract (en)
[origin: US2021350873A1] A nucleic acid sequencing technique is described. Sequence data, e.g., generated by a sequencing device, may be analyzed to scan k-mers of a fixed size n in individual reads in the sequence data. Exact matches of the k-mers in the sequence data with reference k-mers are identified. The number of exact matches, their distribution in a reference genome, and/or a number of sequence reads in the sequence data that map to different target regions can be used to determine a characteristic of a sample. In one example, the characteristic is a presence of a pathogen in the sample.
IPC 8 full level
G16B 30/10 (2019.01); G16B 20/20 (2019.01); G16H 50/80 (2018.01)
CPC (source: EP IL KR US)
G16B 20/20 (2019.01 - EP IL KR US); G16B 30/00 (2019.01 - IL US); G16B 30/10 (2019.01 - EP IL KR); G16H 50/80 (2017.12 - EP IL KR)
Citation (search report)
See references of WO 2021226523A2
Designated contracting state (EPC)
AL AT BE BG CH CY CZ DE DK EE ES FI FR GB GR HR HU IE IS IT LI LT LU LV MC MK MT NL NO PL PT RO RS SE SI SK SM TR
Designated extension state (EPC)
BA ME
Designated validation state (EPC)
KH MA MD TN
DOCDB simple family (publication)
US 2021350873 A1 20211111; AU 2021267389 A1 20221020; AU 2021269069 A1 20221020; BR 112022020101 A2 20221129; CA 3174298 A1 20211111; CN 115461817 A 20221209; CN 115552535 A 20221230; EP 4147241 A1 20230315; EP 4147242 A2 20230315; IL 297920 A 20230101; IL 297921 A 20230101; JP 2023524531 A 20230612; JP 2023525470 A 20230616; KR 20230009877 A 20230117; KR 20230009878 A 20230117; MX 2022014017 A 20221130; US 2023207059 A1 20230629; WO 2021226522 A1 20211111; WO 2021226523 A2 20211111; WO 2021226523 A3 20211223
DOCDB simple family (application)
US 202117314513 A 20210507; AU 2021267389 A 20210507; AU 2021269069 A 20210507; BR 112022020101 A 20210507; CA 3174298 A 20210507; CN 202180031749 A 20210507; CN 202180032029 A 20210507; EP 21729138 A 20210507; EP 21729693 A 20210507; IL 29792022 A 20221103; IL 29792122 A 20221103; JP 2022563063 A 20210507; JP 2022567152 A 20210507; KR 20227034954 A 20210507; KR 20227034955 A 20210507; MX 2022014017 A 20210507; US 2021031389 W 20210507; US 2021031390 W 20210507; US 202117997633 A 20210507