[0001] The present invention relates to antibodies and fragments thereof, especially humanised
antibodies, recognising the Fas antigen, to DNA encoding all or part of such an antibody,
and to agents, comprising such antibodies, for the prophylaxis and/or treatment of
conditions arising from abnormalities in the Fas/Fas ligand system.
[0002] The physiological death of cells in a living organism in the natural course of events
is known as apoptosis, and is distinguished from the pathological death of cells,
i.e. necrosis [
c.f. Kerr
et al., (1972), Br. J. Cancer,
26, 239
et seq.]. Apoptosis is an example of programmed cell death, which is where certain cells are
programmed, in advance, to die in a living organism in the natural course of events,
such as when the cell in question has performed a pre-determined function. Apoptosis
is characterised by such morphological changes as curved cell surface, condensed nuclear
chromatin and fragmented chromosomal DNA, amongst others.
[0003] Apoptosis plays a role in the differentiation of lymphocytes (T cells and B cells)
by eliminating cells that recognise an autoantigen. In this respect, it has been demonstrated
that 95%, or even more, cells, such as those which react with autoantigens, are eliminated
in the thymus during the maturation of T lymphocytes [
c.f. Shigekazu Nagata, Tanpakushitsu Kakusan Koso, (1993), 38, 2208-2218]. When such cells
are not eliminated by apoptosis, then it is believed that this is a cause of autoimmune
disease, due to the presence of mature, auto-reactive lymphocytes in the system [
c.f. Nakayama
et al., (1995), Mebio,
12 (10), 79-86].
[0004] Various molecules have been identified as being involved in apoptosis, including:
Fas [
c.f. Yonehara, S.,
et al., (1989), J. Exp. Med.,
169, 1747-1756]; tumour necrosis factor receptor [
c.f. Loetscher, H.,
et al., (1990), Cell,
61, 351-359]; CD40 [
c.f. Tsubata, T.,
et al., (1993), Nature,
364, 645-648]; and perforin/granzyme A [
c.f. Jenne, D. E.,
et al., (1988), Immunol. Rev. 103, 53-71].
[0005] Fas is a transmembrane protein, present on the cellular surface, and binding of its
extracellular domain to a protein generally known as "Fas ligand", expressed on the
surface of other cells, induces apoptosis in the cell expressing Fas. Abnormalities
in the Fas/Fas ligand system result in various disorders, by failing to delete cells
which could be detrimental to homeostasis, and which should have been eliminated by
apoptosis, or, alternatively, by inducing apoptosis in cells not otherwise scheduled
for elimination and which could be essential for maintaining homeostasis. Such disorders
are those referred to herein as being conditions arising from abnormalities in the
Fas/Fas ligand system.
[0006] In the development, or progression, of diseases arising from abnormalities of the
Fas/Fas ligand, it is often the case that abnormal cells, which express Fas but which,
nevertheless, remain undeleted (abnormal cells), either attack normal tissues or cells,
or else proliferate abnormally, thereby causing disorders in the tissues or cells
which, in turn, lead to the respective disease symptoms. In some cases, these disorders
may arise from, or be exacerbated by, the expression of Fas on the abnormal cells,
thereby stimulating apoptosis in normal tissues or cells. Specific examples of diseases
attributable to abnormalities of the Fas/Fas ligand system are as follows.
Autoimmune diseases.
[0007] Links between various human autoimmune diseases (Hashimoto disease, systemic lupus
erythematosus, Sjögren syndrome, pernicious anaemia, Addison disease, insulin dependent
diabetes mellitus, scleroderma, Goodpasture's syndrome, Crohn's disease, autoimmune
haemolytic anaemia, sterility, myasthenia gravis, multiple sclerosis, Basedow's disease,
thrombopenia purpura, rheumatoid arthritis) and abnormalities in the Fas/Fas ligand
system have been reported many times.
[0008] In the mouse, various genetic abnormalities of the Fas/Fas ligand system are known,
including the lpr (lymphoproliferation), gld (generalised lymphoproliferative disease),
and lpr
cg (where the lpr gene complements the gld gene) mutations. Mice having such genetic
abnormalities all exhibit various autoimmune symptoms, accompanied by characteristic
systemic swelling of the lymph nodes.
[0009] The MRL-
lpr/lpr mouse, a mouse model of spontaneous human systemic lupus erythematosus, shows a marked
increase in the mass of its lymph nodes and produces autoantibodies causing nephritis
owing to the formation of immune complexes. It is speculated that this mouse exhibits
this pathology as a result of a mutation in the Fas gene, resulting in a lack of immunological
tolerance to autoantigen by failure of Fas induced apoptosis in the peripheral system,
as well as by the long-term accumulation of activated autoreactive T cells [
c.f. Strasser, A., Nature,
373, 385 (1995)].
[0010] In the human, several cases have been reported, including two paediatric cases involving
swelling of the lymph nodes, hyper γ-globulinaemia and marked increase in CD4
-CD8
- T cells [
c.f. Sneller, MC.,
et al., (1992), J. Clin. Invest.,
90, 334]. These cases were reported to be based on abnormalities in the Fas gene [
c.f. Fisher, G. H.,
et al., (1995), Cell,
81, 935; and Rieux-Laucat, F., et
al., (1995), Science,
268, 1347], and designated autoimmune lymphoproliferative syndrome (ALPS). Based on these
findings, it is considered that the apoptosis-inducing system, mediated by Fas, is
involved to a large extent in the establishment and maintenance of self-tolerance,
not only in the mouse but also in the human, and disorders of this system induce various
autoimmune diseases.
[0011] It is also known that rheumatoid arthritis has an autoimmune element, based on the
fact that the vast majority of T cells invading affected regions of rheumatoid arthritis
patients and causing tissue destruction express Fas [
c.f. Hoa, T. T. M.,
et al., (1996), J. Rheumatol.,
23, 1332-1337].
[0012] Many cases of insulin dependent diabetes mellitus result from a critical shortage
of insulin secretion, owing to destruction of pancreatic beta cells by autoreactive
T cells. Thus, elimination of autoreactive T cells is important in the radical treatment
of certain forms of insulin dependent diabetes mellitus.
[0013] In graft versus host disease, such as occurs after a bone marrow transplant, expression
of Fas increases in the affected organ, and there is a direct correlation between
the degree of increase in Fas expression and damage to the target organ [
c.f. Chu, J. L.,
et al., (1995), J. Exp. Med.,
181, 393]. Therefore, the aim in preventing or treating this disease, is to block apoptosis
in the cells of the target organ and to decrease the numbers of cells attacking the
target organ.
Allergic diseases
[0014] Inflammatory cells involved in allergic diseases are normally activated and invade
the lesions. The inflammatory cells accumulate locally in the lesion, and are able
to continue to function long term, as their lives are extended by suppression of apoptosis.
In an experimental model in which acidophilic inflammation of the air passage is induced
in mice, it has been demonstrated that administration of an anti-Fas antibody, having
apoptosis-inducing activity,
via the air passage, results in the disappearance of invasion of acidophiles under the
mucosa normally seen after inhalation of the allergen [
c.f. Tsuyuki, S.,
et al., (1995), J. Clin. Invest.,
96, 2924]. Therefore, it is possible to alleviate the symptoms in allergic inflammation
by inducing apoptosis in the inflammatory cells.
Rheumatoid arthritis
[0015] Apart from the autoimmune aspect of rheumatoid arthritis described above, abnormally
proliferating synovial cells in the lesions are known to express Fas [
c.f. Hoa, T. T. M.,
et al., (1996), J. Rheumatol.,
23, 1332]. Apoptosis can be induced by stimulating the synovial cells from such lesions
with anti-Fas antibody having apoptosis-inducing activity [
c.f. Nakajima, T.,
et al., (1995), Arthr. Rheum.,
38, 485]. In other words, the Fas/Fas ligand system is not functioning properly in the
foci of rheumatoid arthritis patients, and neither autoreactive T cells nor abnormally
proliferating synovial cells are eliminated, despite both expressing Fas.
Arteriosclerosis
[0016] Although the final diagnosis of cell deaths at the centre of arteriosclerosis lesions
is necrosis, involvement of apoptosis in the progression and degeneration processes
has been reported [
c.f. Kenji Harada (1997), Gendai Iryou,
29, 109]. Electron microscopy of the lesions of arteriosclerosis shows apoptosis of
smooth muscle cells, characterised by nucleic condensation [
c.f. Isner, J. M.,
et al., (1995), Circulation,
91, 2703]. Further it has been reported that foam cells, which are macrophages gathering
in the inner layer of the artery and incorporating lipids in early arteriosclerotic
lesions, express Fas and are caused to undergo apoptosis with naturally occurring
apoptosis-inducing anti-Fas antibodies [
c.f. Richardson, B. C.,
et al., (1994), Eur. J. Immunol.,
24, 2640]. Arteriosclerotic lesions of are often associated with lymphocyte infiltration,
suggesting a possibility that the Fas ligand of T cells, together with the Fas of
macrophages, is responsible for controlling arteriosclerosis [
c.f. Kenji Harada (1997), Gendai Iryou,
29, 109].
Myocarditis and cardiomyopathy
[0017] The Fas/Fas ligand system is likely to be involved in the pathogeneses of autoimmune
heart diseases, such as ischaemic heart disease, viral heart disease, dilated cardiomyopathy
and chronic cardiomyopathy. Myocarditis is inflammation of the heart muscle considered
to be caused mainly by viruses, such as coxsackie virus, and is typified by chest
pain, arrhythmia, heart failure or shock, after cold-like symptoms.
[0018] Cardiomyopathy is defined as "a disease of the cardiac muscle of unknown cause,"
although its cause is also considered likely to be as a result of viral infection.
In studies of mouse myocarditis models, with heart failure, apoptotic cells (as evidenced
by condensation and/or fragmentation of the nuclei), are observed in the mouse heart
after viral inoculation. Increase in Fas expression is also observed in the mouse
heart, which has led to speculation that the condition was as a result of apoptosis
induced by Fas ligand derived from infiltrating inflammatory cells, predominantly
lymphocytes [
c.f. Takehiko Yamada,
et al. Gendai Iryou ,(1997),
29, 119]. It is known that apoptosis is induced in cultured rat cardiac muscle cells
by ischaemia, concurrently with an increase in mRNA coding for Fas in the cells [
c.f. Tanaka M.,
et al., (1994), Circ. Res.
75, 426] .
Renal diseases
[0019] In many chronic renal diseases, reconstitution of the tissue within the glomeruli
results in the accumulation of extracellular substrates within the glomeruli, thereby
promoting sclerosis of the glomeruli, leading to the pathological loss of filtering
function and, ultimately, to chronic renal failure. In a model of progressive glomerulosclerosis,
the sclerotic regions exhibited typical apoptotic appearances, at electron microscopic
levels, and an increase in apoptosis in glomeruli is observed, consistent with a decrease
in the number of glomerular cells associated with the progression of sclerosis [
c.f. Sugiyama H.,
et al., (1996), Kidney Int.,
49, 103]. In acute glomerular nephritis, it is known that the disease is alleviated
by the apoptotic reduction in numbers of abnormally proliferated mesangial cells [
c.f. Shimizu A.,
et al., (1995), Kidney Int., 47, 114 and Baker A. J.,
et al., (1994), J. Clin. Invest.,
94, 2105]. In diseases such as purpura nephritis and lupus nephritis, a marked increase
in cells expressing Fas in glomeruli has been reported [
c.f. Takemura T.,
et al., (1995), Kidney Int.,
48, 1886].
Hypoplastic anaemia
[0020] On the surface of haematopoietic precursor cells of patients with hypoplastic anaemia,
Fas expression is remarkably elevated compared with that in normal individuals, suggesting
the involvement of Fas in the decrease of haematopoietic stem cells in these patients
[
c.f. Maciejewski, J. P.,
et al., (1995), Br. J. Haematol.,
91, 245].
Hepatitis
[0021] In fulminant hepatitis, it is known that apoptosis is induced in many hepatocytes.
Extensive hepatocyte death, similar to that observed in fulminant hepatitis, is observed
upon intraperitoneal administration of the anti-Fas antibody Jo2 to mice. Thus, it
is considered likely that the pathogenesis of fulminant hepatitis involves Fas-induced
apoptosis of hepatocytes [
c.f. Kamogawa, Y.,
et al., (1996), Molecular Medicine,
33, 1284; and Ogasawara, J.,
et al., (1993), Nature, 364, 806]. In immunohistochemical studies, enhanced Fas expression
was observed in the cytoplasm of hepatocytes in the regions showing high levels of
hepatocyte necrosis, such as within lesions of chronic hepatitis and on the cell membrane
of hepatocytes of lesions of hepatic diseases, such as fatty liver [
c.f. Hiramatsu, N.,
et al., (1994), Hepatology, 19, 1354 and Takatani, M.,
et al., (1996), International Hepatology Commun.,
4, 334].
[0022] In addition, Fas is expressed in the lesions of chronic persistent hepatitis C and
chronic active hepatitis, both of which show dispersed staining of hepatocytes surrounded
by infiltrating lymphocytes, which are apparently cytotoxic T cells [
c.f. Mita, E.,
et al., (1994), Biochem. Biophys. Res. Commun.,
204, 468]. Cytotoxic T cells have the function of inducing apoptosis in infected cells
via the Fas ligand expressed on their surface. They similarly induce apoptosis in the
normal cells located near-by. This affect on local, normal cells, called the bystander
disorder, results from the fact that many cells in the body express Fas after either
their own infection or after infection of neighbouring cells. In chronic hepatitis
cases, where hepatitis C virus-derived RNA is substantially reduced after the administration
of interferon, Fas expression in the hepatic tissue decreases markedly.
[0023] Hepatocytes of patients with acute hepatic failure have increased amounts of Fas
on the cell surface, and undergo apoptosis when exposed to apoptosis-inducing, anti-Fas
antibodies. Further, in alcoholic hepatitis, Fas ligand is expressed on the hepatocytes
themselves within the pseudoacinus [
c.f. Galle, P. R.,
et al., (1995), J. Exp. Med.,
182, 1223]. In studies involving
in situ hybridisation of Fas ligand gene expression, expression was found, both in hepatic
infiltrating lymphocytes, in cases of acute hepatic failure, and also in the hepatocytes
themselves in the pseudoacinus in cases of alcoholic cirrhosis (as above). Thus, it
is speculated that apoptosis is induced by different mechanisms in viral cirrhosis
and alcoholic cirrhosis, but in both cases the Fas/Fas ligand system is abnormal.
In a mouse model of hepatitis, it is known that hepatic disorder is inhibited by the
administration of a substance capable of inhibiting the binding of Fas ligand to Fas
[
c.f. Kondo, T.,
et al., (1997), Nature Medicine,
3, 409].
Acquired immunodeficiency syndrome
[0024] Immunodeficiency in patients infected with the human immunodeficiency virus (HIV)
results, at least partially, from the apoptotic cell deaths of numerous immune cells
not infected with HIV. Helper T cells die on contact with HIV. Since growth factor
from helper T cells is essential for the suppression of apoptosis in cytotoxic T cells,
depletion of helper T cells results in the apoptosis of cytotoxic T cells. It is also
considered likely that apoptosis of immune cells in HIV-infected patients is due to
abnormalities of the Fas/Fas ligand system, based on observations that expression
of Fas in the peripheral blood lymphocytes of HIV-infected patients correlates well
with the pathological progression of the disease [
c.f. Dhein, J.,
et al., (1995), Behring Inst. Mitt.,
96, 13 and McCloskey, T. W.,
et al., (1995), Cytometry,
22, 111]. Fas-positive peripheral blood lymphocytes from non-infected individuals do
not readily undergo apoptosis by Fas stimulation, whereas peripheral blood lymphocytes
from infected patients undergo Fas-induced apoptosis within a short period [
c.f. Owen-Schaub, L. B.,
et al., (1992), Cell Immunol.,
140, 197].
Rejection after organ transplantation
[0025] Rejection after organ transplantation shares certain similarities with autoimmune
diseases, except that the transplanted organ is being attacked by cytotoxic T cells
from a donor. Thus, alleviation of the symptoms can be expected if the functions of
cytotoxic T cells can be suppressed.
[0026] For the diseases listed above, effective means for their treatment is by the elimination
of abnormal cells (
e.g., autoreactive T cells in autoimmune diseases, foam cells in arteriosclerosis, mesangial
cells in acute glomerular nephritis, infected cells in viral infections, and synovial
cells in rheumatoid arthritis) and/or by the protection of normal tissues or cells.
[0027] The problem lies in the fact that agents which are only capable of inducing Fas-mediated
apoptosis, are highly likely to cause disorders in normal tissues, even though abnormal
cells are eliminated. On the other hand, agents only capable of inhibiting Fas-mediated
apoptosis cannot eliminate abnormal cells, even though they may be able to protect
normal cells. For example, the anti-mouse Fas monoclonal antibody Jo2 has apoptosis-inducing
activity but causes fulminant hepatitis in mice [
c.f. Ogasawara, J.,
et al., (1993), Nature,
364, 806-809].
[0028] To date, an anti-Fas antibody which can be used in the treatment and/or prophylaxis
of any of the above diseases, but which is not associated with any undesirable side
effects, is not known.
[0029] Immunoglobulin G (IgG) is composed of two light polypeptide chains (L chains), each
having a molecular weight of about 23,000 kD, and two heavy polypeptide chains (H
chains), each having a molecular weight of about 50,000 kD. Both H and L chains consist
of a repeated region of conserved amino acids consisting of about 110 residues. This
region is referred to herein as a "domain", and constitutes the basic three-dimensional
structural unit of the of IgG. The H and L chains consist of four and two consecutive
domains, respectively.
[0030] When antibody amino acid sequences are compared, the amino-terminal domain of both
H and L chains is found to be more variable than the other domains. It is, therefore,
referred to as the `variable' domain (V domain). The V domains of H and L chains associate
with each other by their complementary nature to form variable regions in the amino-termini
of IgG molecules. The other domains associate to form constant regions. The constant
region sequences are characteristic for a given species. For example, the constant
regions of mouse IgG differ from those of human IgG, and a mouse IgG molecule is recognised
as a foreign protein by the human immune system. Administration of a mouse IgG molecule
into a human subject results in the production of a human anti-mouse antibody (hereinafter
referred to as "HAMA") response [Schroff
et al., (1985), Cancer Res.,
45, 879-885]. Accordingly, a mouse antibody cannot be repeatedly administered to a human
subject. For effective administration, the antibody must be modified to avoid inducing
the HAMA response, while maintaining the antibody specificity.
[0031] Data from X-ray crystallography analysis indicates that the immunoglobulin fold generally
forms a long cylindrical structure comprising two layers of antiparallel β-sheets,
each consisting of three or four β-chains. In a variable region, three loops from
each of the V domains of H and L chains cluster together to form an antigen-binding
site. Each of these loops is termed a complementarity determining region (CDR). The
CDR's have the highest variability in amino acid sequence. The portions of the variable
region that are not part of a CDR are called "framework regions" ("FR" regions) and
generally play a role in maintaining the structure of CDR's.
[0032] Kabat and co-workers compared the primary sequences of a number of variable regions
of H and L chains and identified putative CDR's or framework regions, based on sequence
conservation (E. A. Kabat
et al., Sequences of immunological interest, 5th edition, NIH Publication, No. 91-3242).
Further, they classified the framework regions into several subgroups which share
common amino acid sequences. They also identified framework regions that correspond
between mouse and human sequences.
[0033] Studies on the structural characteristics of IgG molecules have led to the development
of methods for preparing humanised antibodies, which do not provoke a HAMA response,
as described below.
[0034] Initial suggestions were directed towards the preparation of a chimaeric antibody,
by joining the variable region of a mouse antibody to the constant regions of human
origin [Morrison, S. L.,
et al., (1984), Proc. Natl. Acad. Sci. USA,
81, p6851-6855]. Such a chimaeric antibody, however, still contains many non-human amino
acid residues, and thus can cause a HAMA response, especially when administered for
a prolonged period [Begent
et al., (1990), Br. J. Cancer,
62, p487
et seq.].
[0035] The grafting of CDR segments alone into a human antibody was then proposed, in order
to further reduce the number of non-human amino acid sequences causing the HAMA response
[Jones, P. T.
et al., (1986), Nature,
321, 522-525]. However, the grafting of the CDR portions alone was generally found to
be insufficient to maintain the activity of the immunoglobulin against an antigen.
[0036] Based on data from X-ray crystallography, Chothia and co-workers [Chothia
et al., (1987), J. Mol. Biol.,
196, 901-917] determined that:
1) A CDR has a region involved in antigen binding and a region involved in maintaining
the structure of the CDR itself. Possible three-dimensional structures for CDR's can
be classified into several classes with characteristic patterns (canonical structures);
and
2) The classes of canonical structures are determined not only by the CDR sequences
but also by the nature of amino acids in specific positions in the framework regions.
[0037] As a result, it has been suggested that the CDR-grafting technique should also involve
the grafting of certain amino acid residues from the framework regions into the human
antibody backbone [Queen
et al., International Patent Publication No. WO90/07861].
[0038] In the context of the above, an antibody from a non-human mammal from which the CDR's
are obtained for grafting is hereinafter termed a 'donor' molecule. A human antibody
into which the CDR's are grafted is hereinafter termed an 'acceptor' molecule.
[0039] In performing CDR-grafting, the structures of the CDR region should ideally be conserved
and the activity of the immunoglobulin molecule should be maintained. The following
factors may, therefore, be relevant:
1) the subgroup of the acceptor; and
2) the nature of the amino acid residues that are transferred from the framework regions
of the donor.
[0040] Queen
et. al [International Patent Publication No. WO90/07861] proposed a method for deciding
whether an amino acid residue from the donor FR was to be grafted along with the CDR
sequence. According to this method, an amino acid residue from a FR region is grafted
onto the acceptor, together with the CDR sequence, if the residue meets at least one
of the following criteria:
1) The amino acid in the human framework region of the acceptor is rarely found at
that position in the acceptor, whereas the corresponding amino acid in the donor is
commonly found at that position in the acceptor
2) the amino acid is closely located to one of the CDR's; and
3) the amino acid has a side-chain atom within approximately 3 Å of a CDR, as judged
by a three-dimensional model of the immunoglobulin, and is potentially able to interact
with an antigen or a CDR of a humanised antibody.
[0041] However, no-one has successfully obtained a humanised, anti-Fas, IgG type antibody
which has apoptosis-inducing activity.
[0042] Thus, in a first aspect, the present invention provides a molecule having a binding
region specific for a Fas epitope, the epitope being conserved between a primate and
a non-primate animal.
[0043] In a second aspect, the present invention provides a molecule having a binding region
specific for a common, mammalian, Fas epitope.
[0044] The present invention further provides an antibody as produced by the hybridoma HFE7A
having the accession number FERM BP-5828, as well as a molecule having at least six
antibody CDR's, the antibody being specific for human Fas, wherein the CDR's have
identity with the CDR's of the antibody as produced by the hybridoma HFE7A having
the accession number FERM BP-5828.
[0045] It is an advantage that an anti-Fas antibody, or similar molecule, of the present
invention, can be evaluated in an animal model of a human Fas-related disease condition.
[0046] It is also an advantage that a humanised anti-Fas antibody, or similar molecule,
of the present invention, is useful in the treatment and/or prophylaxis of conditions
arising from abnormalities in the Fas/Fas ligand system.
[0047] It is a surprising advantage of the HFE7A antibody of the present invention that
it is not only able to induce apoptosis in abnormal cells expressing Fas, but that
it is also able to inhibit apoptosis in normal cells. This advantage generally extends
to humanised anti-Fas antibodies of the present invention.
[0048] No known monoclonal antibody which binds human Fas and which has apoptosis-inducing
activity is capable of binding mouse Fas. Monoclonal antibodies that bind mouse Fas
are known, but none of them binds human Fas. Thus, no known anti-Fas antibody can
be evaluated in disease model mice. By contrast, HFE7A antibodies are able to be evaluated
in disease model mice, thereby both providing means for ensuring pharmaceutical efficacy
and also establishing a model for the investigation of the role of Fas, in general.
[0049] It is believed that the advantages of the antibodies of the present invention arise
from their ability to recognise a conserved epitope on the Fas antigen. Fas is a common
molecule, but varies from species to species. Without being bound by theory, it is
believed that there is at least one conserved region of Fas, which is common to all
mammals, and which is necessary for the Fas apoptosis-inducing function. The molecules
of the present invention recognise a conserved Fas epitope. In this respect, when
comparing murine and human Fas, for example, the epitope in question need not necessarily
be absolutely identical in the two molecules, provided that the epitope binding region
of the molecule is able to recognise both. However, in general, the epitope will be
exactly the same.
[0050] Many antibodies directed against Fas are known, including those capable of inducing
apoptosis, but none has previously been obtained which bound any kind of consensus
sequence. The antibodies of the present invention, by way of contrast, do bind a consensus
sequence. Accordingly, as an extension of the theory, instead of merely acting to
incapacitate or interfere by generalised binding to Fas, which can have dangerous
and unpredictable effects, such as with Jo2 and fulminant hepatitis in mice
(supra), the antibodies of the present invention actually act at the Fas active site, thereby
mimicking a natural ligand, rather than merely non-specifically binding the Fas antigen.
[0051] If a normal laboratory mouse, such as a BALB/c mouse, is immunised with human Fas,
cells producing antibodies which bind both human Fas and mouse Fas will be eliminated
in the thymus, in the usual course of eliminating autoreactive antibodies. Thus, in
order to obtain a mouse monoclonal antibody which is directed to an epitope conserved
between human and mouse and which, accordingly, binds both human Fas and mouse Fas,
it is necessary to use a mouse in which such elimination has been partially or completely
disabled.
[0052] It has been speculated that the Fas/Fas ligand system is involved in this elimination
process of auto-reactive T cells in the thymus [
c.f. Shin Yonehara (1994) Nikkei Science Bessatsu,
110, 66-77]. Therefore, by immunising a mouse having a mutation in the Fas/Fas ligand
system (such a mouse is hereinafter referred to as a "Fas knock-out mouse" or "Fas/Fas
ligand deficient mouse"), for example, one that is unable to express the gene coding
for Fas, antibodies which bind mouse Fas as well as human Fas can be obtained.
[0053] Thus, there is further provided a method for obtaining an antibody, or molecule,
of the invention, comprising administering an immunogenically effective amount of
a substance comprising an immunogenic epitope of heterologous Fas to a non-human animal,
which is at least partially deficient in the apoptotic elimination of autoreactive
T cells, and selecting antibodies from the animal thereafter.
[0054] The substance carrying the Fas epitope may be Fas itself, or may be another suitable
substance, such as a fusion protein.
[0055] Selection of appropriate antibodies is within the skill of those in the art, and
is exemplified below. In particular, it is preferred to use the immunised animal of
the method of the invention to obtain at least one monoclonal antibody, which is readily
obtainable using methods well known in the art.
[0056] It will also be appreciated that, for ease of manipulation, it is preferred that
the non-human animal is a mouse, although other rodent species, such as rabbits, and
other mammals, in general, such as goats and macaques, may also be used, although
such systems are not quite so well characterised as the mouse. It will also be appreciated
that it is preferred that the Fas used for administration be human, although, if desired,
antibodies of the invention may be obtained for other mammals. However, it is generally
envisaged that, owing to the sharing of a common epitope, the antibodies of the present
invention have universal application.
[0057] Using the above method, a hybridoma was prepared which produces a novel anti-Fas
monoclonal antibody binding both human and mouse Fas. A Fas knock-out mouse was immunised
with human Fas and then the spleen cells were fused with mouse myeloma cells, and
monoclonal antibodies were then purified from the culture supernatant.
[0058] The novel anti-Fas monoclonal antibody thus recovered has proved to be efficacious
in alleviating the severity of the symptoms of autoimmune disease model mice. Moreover,
it has been demonstrated that this anti-Fas monoclonal antibody does not induce hepatic
disorders, which has previously been a problem.
[0059] The respective genes for both chains of the new antibody were also cloned and sequenced,
in order to obtain the amino acid sequences of the CDR's. Expression vectors, comprising
the respective genes for the heavy and light chains, were constructed in order to
produce a recombinant anti-Fas antibody. This recombinant antibody, obtained in culture
supernatant fluids of animal cells co-transfected with these vectors, was demonstrated
to react with Fas.
[0060] The anti-Fas antibody thus obtained, and its recombinant antibody clones, are able
to protect the liver from Fas-induced fulminant hepatitis, and are also effective
in the prevention and treatment of rheumatoid arthritis.
[0061] Accordingly, it has now been demonstrated that it is readily possible to provide
antibodies which are able both to induce apoptosis
via Fas in abnormal cells and to inhibit Fas-induced apoptosis in normal cells, and are,
therefore, effective in the prevention, treatment and/or prophylaxis of diseases attributable
to abnormalities of the Fas/Fas ligand system.
[0062] The CDR amino acid sequences of the mouse-derived anti-Fas monoclonal antibody were
grafted into a human antibody and a recombinant antibody which was not immunogenic
to human subjects, but which still had Fas-binding activity, was successfully obtained.
[0063] The present invention allows the construction of humanised antibodies which have
a minimal risk of inducing a HAMA response, whilst still having an effective antibody
effector function.
[0064] As used herein, the terms "human" and "humanised", in relation to antibodies, relate
to any antibody which is expected to elicit little, or no, immunogenic response in
a human subject, the subject in question being an individual or a group.
[0065] It will be appreciated that, in general, it is preferred that all of the CDR's from
a given antibody be grafted into an acceptor antibody, in order to preserve the binding
region for the Fas epitope, or epitope binding region, as it is generally referred
to herein. However, there may be occasions when it is appropriate or desirable for
less than the total amount of CDR's to be grafted into the donor, and these are envisaged
by the present invention. It will also be understood that grafting generally entails
the replacement, residue for residue, of one amino acid or region, for another. However,
occasionally, especially with the transfer of a region, one or more residues may be
added or omitted, as desired, and that such deletions and insertions, as well as appropriate
replacements and invertions, are within the skill of those in the art.
[0066] The epitope binding region of the present invention is a region of the molecule which
corresponds to an epitope binding site of an antibody. The epitope binding region
need not be derived directly from any particular antibody, or pair of antibodies,
and may not resemble any particular epitope binding region. The only requirement is
that the epitope binding region resemble the recognition site of an antibody insofar
as it is able to bind an antigen, in this case, a Fas epitope. Even though the epitope
binding region may be designed using the CDR's from a known antibody, if these are
then grafted into a human antibody, the resulting epitope binding region may not necessarily
resemble that from the known antibody, although a large degree of similarity is desirable,
from the point of view of maintaining binding specificity.
[0067] We particularly prefer that all of the CDR's from the non-human antibody be grafted
into the human antibody. Further, we prefer that certain areas of the framework regions
be incorporated into the acceptor antibody (also referred to as the human antibody,
herein) in order to maintain the 3-dimensional structure of the non-human binding
site. Such areas of the framework regions typically comprise individual amino acid
residues selected for their importance (significant residues), in accordance with
the guidelines below. In particular, those residues which are rare in human, but common
in the relevant non-human antibody, and those residues having a high probability of
interacting directly with the epitope or the recognition site, are preferred to be
grafted together with the CDR's.
[0068] When grafting the CDR's into the human antibody, it will normally be the case that
the non-human CDR replaces a relevant human CDR in its entirety, particularly where
both are of the same length. However, it may also be the case that only a part of
a human CDR is replaced, or only a part of the non-human CDR is grafted, the two usually
going hand-in-hand.
[0069] It will also be appreciated that the CDR's from the non-human antibody should generally
be used to replace the corresponding CDR's in the human antibody. In the situation
where a skeleton human light or heavy chain is used, which only has positions for
insertion of CDR's, rather than actually having CDR's, then similar considerations
apply.
[0070] It will also be understood that the human heavy and light chains need not necessarily
come from the same human antibody, nor even from the same class. What is important
is that the sequence of the selected donor matches, as closely as possible, the sequence
of the non-human antibody. The importance of matching the two chains (light/light
or heavy/heavy) is that the resulting antibody should have a epitope binding region
as closely resembling that of the original non-human antibody as possible, to ensure
the best binding. Thus, the present invention also envisages the possibility of using
matches which are not the closest possible, where there is a reasonable expectation
that the resulting recombinant antibody will serve the required purpose.
[0071] The molecules of the present invention are preferably antibodies, although this is
not necessary, provided that the epitope binding region binds a Fas epitope. Thus,
isolated and stabilised binding sites, for example, may be attached to an affinity
purification column support, or an administration method may comprise an adjuvant
carrier molecule, for example, to which are attached epitope binding regions of the
invention. For ease of reference, the molecules of the present invention will generally
be termed antibodies herein, but such reference encompasses all molecules of the invention,
unless otherwise indicated.
[0072] Where the molecule of the invention is an antibody, it will be appreciated that any
appropriate antibody type may be emulated, or employed, such as IgG, IgA, IgE and
IgM, with IgG being generally preferred.
[0073] Where molecules and antibodies are discussed herein, it will also be understood that
similar considerations apply,
mutatis mutandis, to any nucleic acid sequences encoding them, as appropriate.
[0074] Certain preferred embodiments of the present invention are as follows.
[0075] It is preferred that the antibody of the invention binds a peptide comprising the
amino acid sequence of SEQ ID No. 1 of the Sequence Listing.
[0076] The antibody is preferably IgG and, more preferably, comprises a light chain polypeptide
protein selected individually from the amino acid sequence 1 to 218 of SEQ ID No.
50, the amino acid sequence 1 to 218 of SEQ ID No. 52, the amino acid sequence 1 to
218 of SEQ ID No. 54, the amino acid sequence 1 to 218 of SEQ ID No. 107, and the
amino acid sequence 1 to 218 of SEQ ID No. 109 of the Sequence Listing, and wherein
the heavy chain polypeptide protein preferably comprises the amino acid sequence 1
to 451 of SEQ ID No. 89 or the amino acid sequence 1 to 451 of SEQ ID No. 117 of the
Sequence Listing.
[0077] An antibody of the invention, in a preferred embodiment, has a light chain and a
heavy chain, the heavy chain having the following general formula (I):

wherein FRH
1 represents any amino acid sequence consisting of 18 to 30 amino acids, CDRH
1 represents the sequence as defined in SEQ ID No. 2 of the Sequence Listing, FRH
2 represents any amino acid sequence consisting of 14 amino acids, CDRH
2 represents the sequence as defined in SEQ ID No. 3 of the Sequence Listing, FRH
3 represents any amino acid sequence consisting of 32 amino acids, CDRH
3 represents the sequence as defined in SEQ ID No. 4 of the Sequence Listing, FRH
4 represents any amino acid sequence consisting of 11 amino acids, and each amino acid
binds another
via a peptide bond, and the light chain having the following general formula (II) :

wherein FRL
1 represents any amino acid sequence consisting of 23 amino acids, CDRL
1 represents the sequence as defined in SEQ ID No. 5 of the Sequence Listing, FRL
2 represents any amino acid sequence consisting of 15 amino acids, CDRL
2 represents the sequence as defined in SEQ ID No. 6 of the Sequence Listing, FRL
3 represents any amino acid sequence consisting of 32 amino acids, CDRL
3 represents the sequence as defined in SEQ ID No. 7 of the Sequence Listing, FRL
4 represents any amino acid sequence consisting of 10 amino acids, and each amino acid
binds another
via a peptide bond.
[0078] The invention also provides DNA and RNA encoding any one of the light or heavy chain
polypeptide proteins described above. More preferred is DNA comprising the nucleotide
sequence 100 to 753 of SEQ ID No. 49, DNA comprising the nucleotide sequence 100 to
753 of SEQ ID No. 51, DNA comprising the nucleotide sequence 100 to 753 of SEQ ID
No. 53 and/or DNA comprising the nucleotide sequence 84 to 2042 of SEQ ID No. 88 of
the Sequence Listing.
[0079] The invention further provides a recombinant DNA vector comprising DNA as defined
above, as well as a host cell transformed with such a vector. The host is preferably
transformed with a separate vector for each heavy and light chain encoded, so will
usually contain two vectors, although the present invention also envisages a host
transformed with only one expression vector encoding all sequences to be expressed.
Such a host cell is preferably mammalian.
[0080] E. coli pHSGMM6 SANK73697 (FERM BP-6071),
E. coli pHSGHM17 SANK73597 (FERM BP-6072),
E. coli pHSGHH7 SANK73497 (FERM BP-6073) ,
E. coli pHSHM2 SANK 70198 and
E. coli pHSHH5 SANK 70398 (FERM BP-6272),
E. coli pgHSL7A62 (FERM BP-6274) SANK73397 (FERM BP-6074) and
E. coli pgHPDHV3 SANK 70298 (FERM BP-6273) are each preferred embodiments of the invention.
[0081] The present invention also provides a method for producing a humanised anti-Fas antibody
comprising culturing the above host cells, and then recovering the humanised anti-Fas
antibody from the culture.
[0082] Further provided is an agent for the prophylaxis or treatment of diseases attributable
to abnormalities of the Fas/Fas ligand system comprising as an active ingredient the
antibody of the present invention, especially where the diseases are as defined above.
Targeted diseases are autoimmune diseases (systemic lupus erythematosus, Hashimoto
disease, rheumatoid arthritis, graft versus host disease, Sjögren syndrome, pernicious
anaemia, Addison's disease, scleroderma, Goodpasture syndrome, Crohn's disease, autoimmune
haemolytic anaemia, sterility, myasthenia gravis, multiple sclerosis, Basedow disease,
thrombopenia purpura, or insulin dependent diabetes mellitus). Separate preparations
are also envisaged for: allergy; rheumatoid arthritis; arteriosclerosis; myocarditis
or cardiomyopathy; glomerular nephritis; hypoplastic anaemia; hepatitis (fulminant
hepatitis, chronic hepatitis, viral hepatitis (hepatitis C, hepatitis B, hepatitis
D) or alcoholic hepatitis); and rejection after organ transplantation.
[0083] There is further provided use of a molecule, especially an antibody, particularly
a humanised antibody, of the present invention, in the manufacture of a medicament
for the treatment or prophylaxis of a condition as described herein.
[0084] The FR's are present in the variable region of an H or L chain subunit of an immunoglobulin
molecule. For instance, FRH
1 refers to the framework region located at the most N-terminal position in the variable
region of an H chain subunit, and FRL
4 refers to the fourth framework region from the N-terminus of the variable region
of an L chain subunit. Similarly, CDRH
1, for example, refers to the CDR present at the most N-terminal position in the variable
region of an H chain subunit, and CDRL
3 refers to the third CDR from the N-terminus of the variable region of an L chain
subunit. The FRs flank the CDR regions in any light or heavy chain.
[0085] In one embodiment, an anti-Fas monoclonal antibody, suitable to prepare a humanised
anti-Fas antibody according to the present invention, may be obtained by culturing
a suitable hybridoma which, in turn, may be obtained by immunising a Fas knock-out
mouse with human Fas and subsequently fusing the spleen cells from the mouse with
mouse myeloma cells.
[0086] Preparation of a monoclonal antibody typically involves the following steps:
a) purification of a biomacromolecule for use as the immunising antigen;
b) preparation of antibody producing cells, after first immunising an appropriate
animal using injections of the antigen, bleeding the animal and assaying the antibody
titre, in order to determine when to remove the spleen;
c) preparation of myeloma cells;
d) fusing the antibody producing cells and myeloma cells;
e) selecting a hybridoma producing an antibody of interest;
f) preparing a single cell clone (cloning);
g) optionally, culturing the hybridoma cells, or growing animals into which the hybridoma
cells have been transplanted, for large scale preparation of the monoclonal antibody;
and h) testing the biological activities and the specificity, or assaying marker agent
properties, of the monoclonal antibody thus prepared.
[0087] The general procedure followed for the preparation of an anti-Fas monoclonal antibody
is herein below described in more detail, in line with the above described steps.
However, it will be appreciated that the method described below only represents one
way of preparing a suitable antibody, and other procedures may be followed, as desired,
such as for instance, using cells other antibody producing cells than spleen cells
and other cell lines than myeloma.
a) Preparation of antigen
[0088] A recombinant protein (hereinafter referred to as "recombinant human Fas"), effective
as the Fas antigen, can be obtained by transfecting the monkey cell line COS-1 with
the expression vector pME18S-mFas-AIC, which encodes a fusion protein comprising the
extracellular domain of human Fas and the extracellular domain of the mouse interleukin-3
receptor [IL3R-
c.f. Nishimura, Y.,
et al., (1995), J. Immunol.,
154, 4395-4403], and collecting and partially purifying the expression product. The plasmid
phFas-AIC2 was constructed by inserting DNA encoding a human Fas and mouse IL3R fusion
protein into pME18S, which is an expression vector for animal cells. As noted above,
the materials used, such as the DNA encoding Fas, the vector and the host, are not
restricted to those mentioned.
[0089] The resulting human Fas and IL3R fusion protein, referred to herein as recombinant
human Fas, collected from the culture supernatant of the transformed COS-1 cells may
be partially purified by a suitable method, such as ion-exchange chromatography using
a Resource Q column (tradename; Pharmacia).
[0090] As a suitable alternative, purified Fas obtained from the cell membranes of human
cell lines can be used as the antigen. Further, since the primary structure of Fas
is known [
c.f. Itoh, N.,
et al., (1991), Cell,
66, 233-243], a peptide comprising a suitable portion of the amino acid sequence of
human Fas, such as that of SEQ ID No. 1 of the Sequence Listing, may be chemically
synthesised by any suitable method and used as the antigen.
b) Preparation of antibody producing cells
[0091] An experimental animal is immunised with the immunogen produced in step a), suitably
mixed with an adjuvant, such as Freund's complete, or incomplete, adjuvant and alum.
In the present instance, a suitable experimental animal is a Fas knock-out mouse,
which may be produced by the method of Senju
et al. [Senju, S.,
et al., (1996), International Immunology,
8, 423].
[0092] Suitable administration routes to immunise the mouse include the subcutaneous, intraperitoneal,
intravenous, intradermal and intramuscular injection routes, with subcutaneous and
intraperitoneal injections being preferred.
[0093] Immunisation can be by a single dose or, more preferably, by several repeated doses
at appropriate intervals (preferably 1 to 5 weeks). Immunised mice are monitored for
anti-Fas antibody activity in their sera, and an animal with a sufficiently high antibody
titre is selected as the source of antibody producing cells. Selecting an animal with
a high titre makes the subsequent process more efficient. Cells for the subsequent
fusion are generally harvested from the animal 3 to 5 days after the final immunisation.
[0094] Methods for assaying antibody titre include various well known techniques such as
radioimmunoassay (RIA), solid-phase enzyme immunoassay (ELISA), fluorescent antibody
assay and passive hemagglutination assay, with RIA and ELISA preferred for reasons
of detection sensitivity, rapidity, accuracy and potential for automation.
[0095] Determination of antibody titre may be performed, for example, by ELISA, as follows.
First, purified or partially purified Fas is adsorbed onto the surface of a solid
phase, such as a 96-well ELISA plate, followed by blocking any remaining surface,
to which Fas has not bound, with a protein unrelated to the antigen, such as bovine
serum albumin (BSA). After washing, the well surfaces are contacted with serially
diluted samples of the antibody preparations to be tested (for example, mouse serum)
to enable binding of the anti-Fas antibody in the samples to the antigen. An enzyme-labelled,
anti-mouse antibody, as the secondary antibody, is added to bind the mouse antibody.
After washing, the substrate for the enzyme is added, and anti-Fas binding activity
can then be assayed by determining a suitable change, such as absorbance change due
to colour development.
c) Preparation of myeloma cells
[0096] In general, cells from established mouse cell lines serve as the source of myeloma
cells. Suitable cell lines include: 8-azaguanine resistant mouse (derived from BALB/c)
myeloma strains, P3X63Ag8U.1 (P3-U1) [Yelton, D. E.,
et al., Current Topics in Microbiology and Immunology,
81, 1-7, (1978)], P3/NSI/1-Ag4-1(NS-1) [Kohler, G.,
et al., European J. Immunology,
6, 511-519 (1976)], Sp2/O-Ag14(SP-2) [Shulman, M.,
et al., Nature,
276, 269-270 (1978)], P3X63Ag8.653 (653) [Kearney, J. F.,
et al., J. Immunology,
123, 1548-1550 (1979)] and P3X63Ag8 (X63) [Horibata, K. and Harris, A. W., Nature,
256, 495-497 (1975)]. The cell line selected is serially transferred into an appropriate
medium, such as 8-azaguanine medium [RPMI-1640 medium supplemented with glutamine,
2-mercaptoethanol, gentamicin, foetal calf serum (FCS), and 8-azaguanine], Iscove's
Modified Dulbecco's Medium (IMDM) or Dulbecco's Modified Eagle Medium (DMEM). The
cells are then transferred to a normal medium, such as ASF104 medium (Ajinomoto, K.
K.) containing 10% w/v FCS, 3 to 4 days prior to fusion, in order to ensure that at
least 2 x 10
7 cells are available on the day of fusion.
d) Cell fusion
[0097] The antibody producing cells used in fusion are plasma cells and their precursor
cells, lymphocytes, which may be obtained from any suitable part of the animal. Typical
areas are the spleen, lymph nodes, peripheral blood, or any appropriate combination
thereof, spleen cells most commonly being used.
[0098] After the last booster injection, tissue in which antibody producing cells are present,
such as the spleen, is removed from a mouse having the predetermined antibody titre
to prepare antibody producing cells. The currently favoured technique for fusion of
the spleen cells with the myeloma cells prepared in step c), employs polyethylene
glycol, which has relatively low cytotoxicity and the fusion procedure using it is
simple. An example of this technique is as follows.
[0099] The spleen and myeloma cells are washed well with serum-free medium (such as RPMI
1640) or phosphate buffered saline (PBS), and then mixed, so that the number ratio
of spleen cells to myeloma cells is approximately between 5 : 1 and 10 : 1, and then
centrifuged. After the supernatant has been discarded and the pelleted cells sufficiently
loosened, a suitable amount, generally 1 ml, of serum-free medium containing 50%(w/v)
polyethylene glycol (m.w. 1,000 to 4,000) is added dropwise with mixing. Subsequently,
10 ml of serum-free medium is slowly added and then the mixture centrifuged. The supernatant
is discarded again, and the pelleted cells are suspended in an appropriate amount
of HAT medium [a solution of hypoxanthin, aminopterin and thymidine (these three compounds,
together, are also known as "HAT") and mouse interleukin-2 (IL-2)]. The suspension
is then dispensed into the wells of culture plates (also referred herein simply as
"plates") and incubated in the presence of 5% v/v CO
2 at 37°C for about 2 weeks, with the supplementary addition of HAT medium as appropriate.
e) Selection of hybridomas
[0100] When the myeloma strain used is resistant to 8-azaguanine, i.e., it is deficient
in the hypoxanthin guanine phosphoribosyl transferase (HGPRT) enzyme, any unfused
myeloma cells and any myeloma-myeloma fusions are unable to survive in HAT medium.
On the other hand, fusions of antibody producing cells with each other, as well as
hybridomas of antibody producing cells with myeloma cells can survive, the former
only having a limited life. Accordingly, continued incubation in HAT medium results
in selection of only the desired hybridomas.
[0101] The resulting hybridomas are then grown up into colonies in HAT medium lacking aminopterin
(HT medium). Thereafter, aliquots of the culture supernatant are removed to determine
anti-Fas antibody titre by, for example, ELISA. When the above recombinant human Fas
fusion protein is used as the ELISA antigen, it is also necessary to eliminate clones
producing an antibody which specifically binds the extracellular domain of the mouse
IL3 receptor. The presence or absence of such a clone may be verified, for example,
by ELISA using mouse IL3 receptor, or its extracellular domain, as the antigen.
[0102] Although the above selection procedure is exemplified using an 8-azaguanine resistant
cell line is used, it will be appreciated that other cell lines may be used with appropriate
selection markers and with appropriate modifications to the media used.
f) Cloning
[0103] Hybridomas which have been shown to produce anti-Fas specific antibodies, using a
method similar to that described in the step b) to determine antibody titre, are then
transferred to another plate for cloning. Suitable cloning methods include: the limiting
dilution method, in which hybridomas are diluted to contain 1 cell per well of a plate
and then cultured; the soft agar method, in which colonies are recovered after culturing
in soft agar medium; using a micromanipulator to separate a single cell for culture;
and "sort-a-clone", in which single cells are separated by a cell sorter. Limiting
dilution is generally the most simple and is commonly used.
[0104] Whichever cloning procedure is selected is repeated 2 to 4 times for each well demonstrating
an antibody titre, and clones having stable antibody titres are selected as anti-Fas
monoclonal antibody producing hybridomas. Hybridomas producing an anti mouse Fas antibody
are selected by a similar method to obtain an anti-Fas monoclonal antibody producing
cell line. A suitable mouse Fas useful for this purpose, for example, is the fusion
protein expressed by cultured animal cells transfected with the expression vector
pME18S-mFas-AIC. This plasmid has DNA encoding a fusion protein comprising the extracellular
domain of mouse Fas and the extracellular domain of the mouse IL3 receptor [
c.f. Nishimura, Y.,
et al., (1995), J. Immunol.,
154, 4395-4403, incorporated herein by reference]. Other sources of murine Fas include
purified mouse Fas and cells which expressing mouse Fas on their surface.
[0105] The mouse-mouse hybridoma HFE7A was selected by the above methodology. Its specific
preparation is described in the accompanying Examples. HFE7A is a cell line producing
an anti-Fas monoclonal antibody suitable as the base in preparing a humanised anti-Fas
antibody of the present invention, and was deposited with the Kogyo Gijutsuin Seimei-Kogaku
Kogyo Gijutsu Kenkyujo on February 19, 1997, in accordance with the Budapest Treaty
on the Deposition of Microorganisms, and was accorded the accession number FERM BP-5828.
Accordingly, when preparing an antibody using the mouse-mouse hybridoma HFE7A, the
preparation may be performed by following a procedure starting from step g) below,
with steps a) to f), above, omitted.
g) Culture of hybridoma to prepare monoclonal antibody
[0106] The hybridoma obtained by the preceding steps is then cultured in normal medium,
rather than HT medium. Large-scale culture can be performed by roller bottle culture,
using large culture bottles, or by spinner culture. The supernatant from the large-scale
culture is then harvested and purified by a suitable method, such as gel filtration,
which is well known to those skilled in the art, to obtain an anti-Fas monoclonal
antibody. The hybridoma may also be grown intraperitoneally in a syngeneic mouse,
such as a BALB/c mouse or a Nu/Nu mouse, to obtain ascitic fluid containing an anti-Fas
monoclonal antibody in large quantities. Commercially available monoclonal antibody
purification kits (for example, MAbTrap GII Kit; Pharmacia) may conveniently be used
to purify the harvested antibodies.
[0107] Monoclonal antibodies prepared as above, and which have been selected for specificity
for human and mouse Fas, have a high specificity to human and mouse Fas.
h) Assay of monoclonal antibody
[0108] Determination of the isotype and the subclass of the monoclonal antibody thus obtained
may be performed as follows. Suitable identification methods include the Ouchterlony
method, ELISA and RIA. The Ouchterlony method is simple, but requires concentration
of the solutions used when the concentration of the monoclonal antibody is low. By
contrast, when ELISA or RIA is used, the culture supernatant can be reacted directly
with an antigen adsorbed on a solid phase and with secondary antibodies having specificities
for the various immunoglobulin isotypes and subclasses to identify the isotype and
subclass of the monoclonal antibody. However, in general, it is preferred to use a
commercial kit for identification, such as a Mouse Typer Kit (tradename; BioRad).
[0109] Quantification of protein may be performed by the Folin-Lowry method, for example,
or by calculation based on the absorbance at 280 nm [1.4 (OD
280) = Immunoglobulin 1 mg/ml].
[0110] Identification of the Fas epitope that the monoclonal antibody recognises may be
performed as follows. First, various partial Fas structures are prepared. The partial
structures may be prepared synthetically, such as by oligopeptide synthesis, or
in vivo by using a suitable host, such as
E. coli, which has been transformed by a suitable vector incorporating DNA encoding the desired
fragments. Both methods are frequently used in combination for the identification
of the epitope recognised by the epitope binding region. For example, a series of
polypeptides having appropriately reduced lengths, working from the C- or N-terminus
of the antigen protein, can be prepared by genetic engineering techniques well known
to those skilled in the art. By establishing which fragments react with the antibody,
an approximate idea of the epitopic site can be obtained.
[0111] The epitope can be more closely identified by synthesising a variety of smaller oligopeptides
corresponding to portions or mutants of the peptide, or peptides, recognised by the
antibody. Oligopeptide synthesis is generally used for the preparation of these smaller
fragments. Identification of the epitope may then be established by binding studies
or by competitive inhibition studies with the recombinant human Fas fusion protein
in ELISA, for example. Commercially available kits, such as the SPOTs Kit (Genosys
Biotechnologies, Inc.) and a series of multipin peptide synthesis kits based on the
multipin synthesis method (Chiron Corp.) may be conveniently used to obtain a large
variety of oligopeptides.
[0112] DNA encoding the heavy and light chains of the anti-Fas monoclonal antibody prepared
above may be obtained by preparing mRNA from hybridoma cells producing the anti-Fas
monoclonal antibody, converting the mRNA into cDNA by reverse transcription, and then
isolating the DNA encoding the heavy and or light chains of the antibody, respectively.
This DNA may then be used to generate the humanised anti-Fas antibody of the present
invention.
[0113] Extraction of mRNA can be performed by the guanidinium thiocyanate-hot phenol method
or by the guanidinium thiocyanate-guanidinium HCl method, for example, but the guanidinium
thiocyanate-caesium chloride method is preferred. Preparation of mRNA from cells is
generally performed by first preparing total RNA and then purifying mRNA from the
total RNA by using a poly(A)
+ RNA purification matrix, such as oligo(dT) cellulose and oligo(dT) latex beads. Alternatively,
mRNA may be prepared directly from a cell lysate using such a matrix. Methods for
preparing total RNA include: alkaline sucrose density gradient centrifugation [
c.f. Dougherty, W. G. and Hiebert, E., (1980), Virology,
101, 466-474]; the guanidinium thiocyanate-phenol method; the guanidinium thiocyanate-trifluorocaesium
method; and the phenol-SDS method. The currently preferred method uses guanidinium
thiocyanate and caesium chloride [
c.f. Chirgwin, J. M.,
et al., (1979), Biochemistry,
18, 5294-5299].
[0114] The thus obtained poly(A)
+ RNA can be used as the template in a reverse transcriptase reaction to prepare single-strand
cDNA [(ss) cDNA]. The (ss) cDNA obtained by the use of reverse transcriptase, as described
above, can then be converted to double stranded (ds) cDNA. Suitable methods for obtaining
the ds cDNA include the S1 nuclease method [
c.f. Efstratiadis, A.,
et al., (1976), Cell, 7, 279-288], the Gubler-Hoffman method [
c.f. Gubler, U. and Hoffman, B. J., (1983), Gene,
25, 263-269] and the Okayama-Berg method [
c.f. Okayama, H. and Berg, P., (1982), Mol. Cell. Biol.,
2, 161-170]. However, the currently preferred method involves the polymerase chain
reaction [PCR-
c.f. Saiki, R. K.,
et al., (1988), Science,
239, 487-491, incorporated herein by reference] using single-strand cDNA as the template.
Thus the preferred procedure is labelled "RT-PCR", as it involves reverse transcription
and PCR.
[0115] The ds cDNA obtained above may then be integrated into a cloning vector and the resulting
recombinant vector can then be used to transform a suitable micro-organism, such as
E. coli. The transformant can be selected using a standard method, such as by selecting for
tetracycline resistance or ampicillin resistance encoded by the recombinant vector.
If
E. coli is used, then transformation may be effected by the Hanahan method [
c.f. Hanahan, D., (1983), J. Mol. Biol.,
166, 557-580, incorporated herein by reference]. Alternatively, the recombinant vector
may be introduced into competent cells prepared by co-exposure to calcium chloride
and either magnesium chloride or rubidium chloride. If a plasmid is used as a vector,
then it is highly desirable that the plasmid harbours a drug-resistant gene, such
as mentioned above, in order to facilitate selection. Brute force selection is possible,
but not preferred. Although plasmids have been discussed, it will be appreciated that
other cloning vehicles, such as lambda phages, may be used.
[0116] To select transformants for those which carry cDNA encoding a subunit of an anti-human
Fas antibody of interest, various methods, such as those described below, can be used.
When the cDNA of interest is specifically amplified by RT-PCR, these steps may be
omitted.
(1) Screening by polymerase chain reaction
[0117] If all or part of the amino acid sequence of the desired protein has been elucidated,
then sense and antisense oligonucleotide primers corresponding to separate non-contiguous
parts of the amino acid sequence can be synthesised. These primers can then be used
in the polymerase chain reaction technique [
c.f. Saiki, R. K.,
et al. (1988), Science,
239, 487-491] to amplify the desired DNA fragment coding for the mouse anti-human Fas
monoclonal antibody subunit. The template DNA used in the PCR may be, for example,
cDNA synthesised by reverse transcription from mRNA of the hybridoma producing the
anti-human Fas monoclonal antibody HFE7A (FERM BP-5828).
[0118] The DNA fragment thus synthesised may either be directly integrated into a plasmid
vector, such as by using a commercial kit, or may be labelled with, for example,
32P,
35S or biotin, and then used as a probe for colony hybridisation or plaque hybridisation
to obtain the desired clone.
[0119] Harvesting of DNA encoding each subunit of anti-human Fas monoclonal antibody from
the appropriate transformants obtained above may be performed by well known techniques,
such as those described by Maniatis, T.,
et al. [in "Molecular Cloning A Laboratory Manual" Cold Spring Harbor Laboratory, NY, (1982)
, incorporated herein by reference]. For example, the region of DNA coding for the
desired subunit may be excised from plasmid DNA after separating the fraction corresponding
to the vector DNA from a transformant which has been determined to possess the necessary
plasmid.
(2) Screening using a synthetic oligonucleotide probe
[0120] If all or part of the amino acid sequence of the desired protein has been elucidated,
then a short contiguous sequence, which is also representative of the desired protein,
may be used to construct an oligonucleotide probe. The probe encodes the amino acid
sequence but, owing to the degeneracy of the genetic code, there may be a large number
of probes that can be prepared. Thus, an amino acid sequence will normally be selected
which can only be encoded by a limited number of oligonucleotides. The number of oligonucleotides
which it is necessary to produce can be further reduced by the substitution of inosine
where any of the four normal bases can be used. The probe is then suitably labelled,
such as with
32P,
35S or biotin, and is then hybridised with denatured, transformed DNA from the transformant
which has been immobilised on a nitrocellulose filter. Positive strains show up by
detection of the label on the probe.
[0121] Wherever appropriate, DNA sequences may be sequenced by various well known methods
in the art including, for example, the Maxam-Gilbert chemical modification technique
[
c.f. Maxam, A. M. and Gilbert, W. (1980) in "Methods in Enzymology"
65, 499-276] and the dideoxy chain termination method using M13 phage [
c.f. Messing, J. and Vieira, J. (1982), Gene,
19, 269-276]. In recent years, a further method for sequencing DNA has gained wide acceptance,
and involves the use of a fluorogenic dye in place of the conventional radioisotope
in the dideoxy method. The whole process is computerised, including the reading of
the nucleotide sequence after electrophoresis. Suitable machinery for the process
is, for example, the Perkin-Elmer Sequence robot "CATALYST 800" and the Perkin-Elmer
model 373A DNA Sequencer. The use of this technique renders the determination of DNA
nucleotide sequences both efficient and safe.
[0122] By using techniques such as those described above, determination of the DNA sequence
can be performed efficiently and safely. Based on the data of the thus determined
respective nucleotide sequences of the DNA of the present invention and the respective
N-terminal amino acid sequences of the heavy and light chains, the entire amino acid
sequences of the heavy and light chains of a monoclonal antibody of the present invention
can be determined.
[0123] For example, the HFE7A monoclonal antibody of the present invention, which is suitable
to provide CDR's for grafting into a humanised antibody of the present invention,
is an immunoglobulin G1 (IgG1) molecule and is, thus, a complex composed of γ1 heavy
chain and κ light chain subunits. Preferred methods for determining partial amino
acid sequences of these respective subunits include, for example, isolating the respective
subunits by a suitable technique, such as electrophoresis or column chromatography,
and then analysing the N-terminal amino acid sequences of the respective subunits
using, for example, an automated protein sequencer (for example, PPSQ-10, Shimadzu
Seisakusyo, K. K.).
[0124] The heavy and light chains of an immunoglobulin each consist of a variable region
and a constant region, the variable region of each chain further consisting of three
CDR's and four framework regions flanking the CDR's.
[0125] The amino acid sequence of the constant region is constant within any given subclass,
regardless of the antigen recognised. On the other hand, the amino acid sequence of
the variable region, at least for the CDR's, is specific for each antibody. However,
it has been established by comparison studies, using data on amino acid sequences
of numerous antibodies, that that both the locations of CDR's and the lengths of framework
sequences are roughly similar among antibody subunits belonging to the same subgroup
[
c.f. Kabat, E. A.,
et al., (1991), in "Sequences of Proteins of Immunological Interest Vol. II," U.S. Department
of Health and Human Services, incorporated herein by reference]. Therefore, by comparing
the amino acid sequences of the heavy and light chains of the anti-Fas monoclonal
antibody HFE7A with those known amino acid sequence data, for example, the CDR's and
the framework regions, as well as the location of the constant region, in each of
the amino acid sequences determined above, can be established.
[0126] The length of FRH
1,
i.e., the most N-terminal framework region of heavy chains, has been occasionally found
to be shorter than the normal length of 30 amino acids. For example, the shortest
known FRH
1 in mouse IgG1, of the same subtype as HFE7A, is only 18 amino acids [
c.f. Kabat
et al., ibid.). Accordingly, in the antibody of the present invention, it will be appreciated that
the length of that part of the overall molecule corresponding to FRH
1 may be of appropriate length, typically between 18 and 30 amino acids, but preferably
about 30 amino acids, provided that the necessary Fas binding activity is not lost.
[0127] The three-dimensional structure of the Fas binding region is mainly determined by
the sequences in the variable regions, with support being provided by the constant
regions. The framework regions provide structure to the CDR's which are chemically
and structurally configured to interact with the antigen. Accordingly, an existing
antibody, or a portion thereof, which recognises an antigen other than Fas can be
selected and modified to recognise Fas by suitable alteration of the CDR's, in accordance
with the guidelines above (see, for example, U.S. patent publication No. 5,331,573).
In order to conserve as much binding activity as possible, it is generally preferred
to select acceptor chains which have the greatest similarity to the donor chains.
Such modified peptides thus modified are useful in the present invention, such as
in prevention or treatment of diseases attributable to abnormalities of the Fas/Fas
ligand system.
[0128] Construction of a mutant wherein one or more amino acids in an amino acid sequence
is deleted may be performed, for example, by cassette mutagenesis (
c.f. Toshimitsu Kishimoto, "Shin-Seikagaku Jikken Kouza
2: Kakusan III Kumikae DNA Gijutsu," 242-251).
[0129] DNA sequences may be prepared by any appropriate method, and many are known. A suitable
method, especially for shorter sequences, is chemical synthesis using a conventional
method, such as the phosphite triester method [
c.f. Hunkapiller, M.,
et al., (1984), Nature,
310, 105-111]. Selection of codons for any amino acid may be from any of the recognised
codons corresponding to a desired amino acid, and such selection may be arbitrary,
or by taking into account frequency of a given codon in a host, or because it is possible
to create a restriction site by appropriate selection, without changing the amino
acid sequence, for example. Partial modification of the nucleotide sequence can be
accomplished by site specific mutagenesis utilising synthetic oligonucleotide primers
coding for the desired modifications [
c.f. Mark, D. F.,
et al., (1984), Proc. Natl. Acad. Sci. USA,
81, 5662-5666], by conventional techniques.
[0130] Hybridisation of DNA with DNA encoding the heavy or light chain of an anti-Fas monoclonal
antibody of the present invention can be determined, for example, by using an appropriate
fragment of DNA of the invention labelled with (α-
32P)dCTP, for example, as a probe by a method such as the random primer method [
c.f. Feinberg, A. P. and Vogelstein, B. (1983), Anal. Biochem.,
132, 6-13] or by the nick translation method [
c.f. Maniatis, T.,
et al., (1982), in "Molecular Cloning A Laboratory Manual" Cold Spring Harbor Laboratory,
NY]. A suitable technique is as follows.
[0131] First, the potentially hybridising DNA is adsorbed onto a nitrocellulose or nylon
membrane, for example, being subjected to alkaline treatment if necessary, and then
being fixed by heating or UV irradiation. In a preferred method, the membrane is next
immersed in prehybridisation solution containing 6 × SSC (1 × SSC is an aqueous solution
of 0.15 M NaCl and 0.015 M citric acid tri-sodium), 5% v/v Denhardt solution and 0.1%
v/v sodium dodecyl sulphate (SDS), and incubated at 55°C for 4 hours or more. Then,
the probe previously prepared is dissolved in similar prehybridisation solution to
a final specific activity of 1 × 10
6 cpm/ml, followed by incubation at 60°C overnight. Subsequently, the membrane is washed
at room temperature by repeated washing with 6 × SSC for 5 minutes and further with
2 × SSC for 20 minutes, and is then subjected to autoradiography.
[0132] By using such a method, DNA hybridisable with the DNA coding for the heavy or light
chain of an anti-Fas monoclonal antibody which can serve as the basis for a humanised
anti-Fas antibody of the present invention is isolatable from any cDNA library or
genomic library [
c.f. Maniatis, T.,
et al., (1982), in "Molecular Cloning A Laboratory Manual" Cold Spring Harbor Laboratory,
NY]. Such DNA is comprised within the scope of the present invention, the essential
features of the hybridisation being 6x SSC and 55°C, preferably 60°C and more preferably
70°C.
[0133] Integration of DNA of the present invention thus obtained into an expression vector
allows transformation of prokaryotic or eukaryotic host cells. Such expression vectors
will typically contain suitable promoters, replication sites and sequences involved
in gene expression, thereby allowing the DNA to be expressed in the host cell.
[0134] Suitable prokaryotic host cells include, for example,
E. coli (Escherichia coli) and
Bacillus subtilis. In order to express the gene of interest in such host cells, these host cells may
be transformed with a plasmid vector containing a replicon derived from a species
compatible with the host, typically having an origin of replication and a promoter
sequence, such as lac UV5. These vectors preferably have sequences capable of conferring
a selection phenotype on the transformed cell.
[0135] A suitable strain of
E. coli is strain JM109 derived from
E. coli K12. Suitable vectors include pBR322 and the pUC series plasmids. Suitable promoters
include the lactose promoter (lac), the tryptophan lactose promoter (trc) , the tryptophan
(trp) promoter, the lipoprotein (lpp) promoter, the lambda (λ) PL promoter derived
from bacteriophage λ, and the polypeptide chain elongation factor Tu (tufB) promoter.
In general, it will be appreciated that the present invention is not limited to the
use of such hosts, vectors, promoters, etc., as exemplified herein and that any suitable
systems may be used, as desired.
[0136] A suitable preferred strain of
Bacillus subtilis is strain 207-25, and a preferred vector is pTUB228 [
c.f. Ohmura, K.,
et al., (1984), J. Biochem.,
95, 87-93]. A suitable promoter is the regulatory sequence of the
Bacillus subtilis a-amylase gene. If desired, the DNA sequence encoding the signal peptide sequence
of α-amylase may be linked to the DNA of the present invention to enable extracellular
secretion.
[0137] Eukaryotic hosts include cell hosts from vertebrate and yeast species. An example
of vertebrate cells used is the monkey COS-1 cell line [
c.f. Gluzman, Y., (1981), Cell,
23, 175-182]. Suitable yeast cell hosts include baker's yeast
(Saccharomyces cerevisiae), methylotrophic yeast
(Pichia pastoris) and fission yeast
(Schizosaccharomyces pombe). It will be appreciated that other hosts may also be used as desired.
[0138] In general, the requirements for suitable expression vectors for vertebrate cells
are that they comprise: a promoter, usually upstream of the gene to be expressed;
an RNA splicing site; a polyadenylation site; and a transcription termination sequence,
as well as any other functionalities required, such as an origin of replication. A
suitable plasmid is pSV2dhfr containing the SV40 early promoter [
c.f. Subramani, S.,
et. al, (1981), Mol. Cell. Biol.,
1, 854-884], but many others are known to those skilled in the art.
[0139] Suitable eukaryotic micro-organisms are the yeasts, such as
S. cerevisiae, and suitable expression vectors for yeasts include pAH301, pAH82 and YEp51. Suitable
vectors contain, for example, the promoter of the alcohol dehydrogenase gene [
c.f. Bennetzen, J. L. and Hall, B. D., (1982), J. Biol. Chem.,
257, 3018-3025] or of the carboxypeptidase Y GAL10 promoter [
c.f. Ichikawa, K.,
et. al, (1993), Biosci. Biotech. Biochem.,
57, 1686-1690]. If desired, the DNA sequence encoding the signal peptide sequence of
carboxypeptidase Y may be linked, for example, to the DNA to be expressed in order
to enable extracellular secretion.
[0140] When COS cells are used as hosts, vectors suitably comprise the SV40 replication
origin, enabling autonomous replication, a transcription promoter, a transcription
termination signal and an RNA splicing site. The expression vectors can be used to
transform the cells by any suitable method, such as the DEAE-dextran method [
c.f. Luthman, H, and Magnusson, G. (1983), Nucleic Acids Res.,
11, 1295-1308], the phosphate calcium-DNA co-precipitation method [
c.f. Graham, F. L. and Van der Eb, A. J., (1973), Virology,
52, 456-457] and the electric pulse electroporation method [c.f. Neumann, E.,
et. al., (1982), EMBO J.,
1, 841-845].
[0141] In a preferred embodiment, COS cells are co-transfected with two separate expression
vectors - one containing DNA encoding a protein comprising at least the variable region
of the heavy chain of the HFE7A antibody, preferably as part of a whole humanised
heavy chain, and one containing DNA encoding a protein comprising at least the variable
region of the light chain of the HFE7A antibody, preferably as part of a whole humanised
light chain, these vectors being expressed simultaneously to generate a humanised
recombinant anti-human Fas antibody.
[0142] Transformants of the present invention may be cultured using conventional methods,
the desired proteins being expressed either intra- or extra- cellularly. Suitable
culture media include various commonly used media, and will generally be selected
according to the host chosen. For example, suitable media for COS cells include RPMI-1640
and Dulbecco's Modified Eagle Minimum Essential medium (DMEM) which can be supplemented
with, as desired, foetal bovine serum (FBS).
[0143] The culture temperature may be any suitable temperature which does not markedly depress
the protein synthesis capability of the cell, and is preferably in the range of 32
to 42°C, most preferably 37°C, especially for mammalian cells. If desired, culture
may be effected in an atmosphere containing 1 to 10% (v/v) carbon dioxide.
[0144] The transformant strains
E. coli pME-H and
E. coli pME-L, each transformed with a recombinant DNA vector for the expression in animal
cells of DNA encoding the heavy and light chains, respectively, of an anti-Fas monoclonal
antibody useful to prepare humanised anti-Fas antibodies of the present invention,
were deposited with the Kogyo Gijutsuin Seimei-Kogaku Kogyo Gijutsu Kenkyujo on March
12, 1997 in accordance with the Budapest Treaty, and the accession numbers FERM BP-5868
and BP-5867, respectively, were accorded them. Therefore, by transforming cultured
animal cells such as COS-1 with the recombinant vectors isolated from the deposited
strains and culturing the transformant cells, a recombinant anti-Fas antibody can
be produced in culture.
[0145] The protein expressed by the transformants of the present invention may be isolated
and purified by various well known methods of separation according whether the protein
is expressed intra- or extra- cellularly and depending on such considerations as the
physical and chemical properties of the protein. Suitable specific methods of separation
include: treatment with commonly used precipitating agents for protein; various methods
of chromatography such as ultrafiltration, molecular sieve chromatography (gel filtration),
adsorption chromatography, ion exchange chromatography, affinity chromatography and
high performance liquid chromatography (HPLC); dialysis; and combinations thereof.
[0146] By the use of such methods as described above, the desired protein can be readily
obtained in high yields and high purity.
[0147] In order to optimally humanise, in this instance, a mouse anti-Fas monoclonal antibody,
it is preferred to graft the variable regions into a human antibody, at least so that
the whole of each CDR is incorporated into the human antibody, and preferably also
so that significant residues of the FR sequences are grafted into the human antibody
in order to maintain as much of the structure of the binding site as possible. This
may be accomplished by any one of the following three methods:
1) using heavy and light chains from the same known human antibody; or
2) using heavy and light chains derived from different human antibodies, which have
high sequence homology to, or share consensus sequences with, the chains of the donor,
while at the same time maintaining the combination of the subgroups of the acceptor
chains; or
3) selecting the FR's of heavy and light chains that have the highest homologies with
the FR's of the donor from a library of the primary sequences of human antibodies,
regardless of the combination of the subgroups.
[0148] Such a selection method based upon sequence homology alone, with no other constraints,
makes it possible for the donor and the acceptor to share at least 70% amino acid
identity in the FR portions. By adopting this approach, it is possible to reduce the
number of amino acids grafted from the donor, with respect to known methods, and thus
to minimise induction of the HAMA response.
[0149] The term 'amino acid sequence homology', as used herein, refers to the similarity
of amino acid sequence between two different polypeptides or proteins. Amino acid
sequence homology can be assessed by any one of a number of methods, commonly involving
the computerised search of sequence databases. These methods are well known to the
person skilled in the art. We prefer that the homology is assessed over the length
of the framework regions.
[0150] It will be appreciated that the role of amino acid residues that occur rarely in
the donor subgroup cannot be fully defined, since techniques for predicting the three-dimensional
structure of an antibody molecule from its primary sequence (hereinafter referred
to as "molecular modelling") have limited accuracy. Known methods, such as the method
of Queen and co-workers (Queen
et al., supra), do not indicate whether the amino acid residue from the donor or from the acceptor
should be selected in such a position. The selection of an acceptor molecule based
upon sequence homology alone can significantly reduce the need to make this type of
selection.
[0151] In addition, we have discovered a further refinement to this method by the provision
of an additional selection procedure, designed to identify amino acids from the donor
FR's which are important in the maintenance of the structure and function of the donor
CDR regions.
[0152] Once the human acceptor molecule has been selected for a given chain, then selection
of the amino acid residues to be grafted from a FR of a donor is carried out as follows.
[0153] The amino acid sequences of the donor and the acceptor are aligned. If the aligned
amino acid residues of the FRs differ at any position, it is necessary to decide which
residue should be selected. The residue that is chosen should not interfere with,
or only have a minimal effect upon, the three-dimensional structure of the CDRs derived
from the donor.
[0154] Queen
et al. [International Patent Publication No. WO90/07861, incorporated herein by reference]
proposed a method for deciding whether an amino acid residue from the donor FR was
to be grafted along with the CDR sequence. According to this method, an amino acid
residue from a FR region is grafted onto the acceptor, together with the CDR sequence,
if the residue meets at least one of the following criteria:
1) The amino acid in the human framework region of the acceptor is rarely found at
that position in the acceptor, whereas the corresponding amino acid in the donor is
commonly found at that position in the acceptor;
2) the amino acid is closely located to one of the CDRs; and
3) the amino acid has a side-chain atom within approximately 3 Å of a CDR, as judged
by a three-dimensional model of the immunoglobulin, and is potentially able to interact
with an antigen or a CDR of a humanised antibody.
[0155] A residue identified by criterion (2), above, often displays the characteristics
of criterion (3). Thus, in the present invention, criterion (2) is omitted and two
new criteria are introduced. Accordingly, in the present invention, an amino acid
residue is grafted from a donor FR along with the CDR if the residue meets at least
one of the following criteria:
a) the amino acid in the human framework region of the acceptor is rarely found at
that position in the acceptor, whereas the corresponding amino acid in the donor is
commonly found at that position in the acceptor;
b) the amino acid has a side-chain atom within approximately 3 Å of a CDR, as judged
by a three-dimensional model of the immunoglobulin, and is potentially able to interact
with an antigen or a CDR of a humanised antibody;
c) the amino acid is found in a position which is involved in determining the structure
of the canonical class of the CDR;
d) the position of the amino acid is found at the contact surface of the heavy and
light chains.
[0156] With respect to criterion (a), an amino acid is defined as "common" when it is found
at that position in 90 % or more of the antibodies of the same subclass [Kabat
et al., supra]. An amino acid is defined as "rare" when it is found in less than 10 % of antibodies
of the same subclass.
[0157] With respect to criterion (c), the position of a canonical class determinant residues
an be determined unambiguously according to the information provided by Chothia and
co-workers [Chothia
et al., supra].
[0158] With respect to criteria (b) and (d), it is necessary to carry out molecular modelling
of the variable regions of the antibody in advance. While any commercially available
software for molecular modelling can be used, we prefer that the AbM software is used
[Oxford Molecular Limited, Inc.].
[0159] Predictions made by molecular modelling have limited accuracy. Therefore, in the
present invention, the structure prediction obtained by molecular modelling was assessed
by comparing it with X-ray crystallography data from the variable regions of various
antibodies.
[0160] When using a structural model generated by molecular modelling (such as AbM software),
two atoms are presumed to be in contact with each other by Van der Waal's forces when
the distance between the two atoms is less than the sum of their Van der Waal's radii
plus 0.5 Å. A hydrogen bond is presumed to be present when the distance between polar
atoms, such as an amide nitrogen and a carbonyl oxygen of the main and side chains,
is shorter than 2.9 Å (the average length for a hydrogen bond) plus 0.5 Å. Furthermore,
when the distance between the two oppositely charged atoms is shorter than 2.85 Å
plus 0.5 Å, they are presumed to form an ion pair.
[0161] The positions of amino acids in the FR which frequently contact a CDR were identified,
based upon X-ray crystallography data from the variable regions of various antibodies.
These positions were determined irrespective of subgroups. For the light chains, these
are positions 1, 2, 3, 4, 5, 23, 35, 36, 46, 48, 49, 58, 69, 71 and 88, and for the
heavy chains positions 2, 4, 27, 28, 29, 30, 36, 38, 46, 47, 48, 49, 66, 67, 69, 71,
73, 78, 92, 93, 94 and 103. The above amino acid numbering is defined in accordance
with Kabat
et al., supra. This numbering system is followed hereinafter. When the same data are analysed by
molecular modelling, the amino acid residues at these positions were shown to be in
contact with the amino acid residues of CDRs in two thirds of the antibody variable
regions that were examined.
[0162] These findings were used to define criterion (b) above. Specifically, if an amino
acid position in an FR is predicted both to contact a CDR by molecular modelling and
is frequently found experimentally to contact a CDR by X-ray crystallographic analysis,
then the grafting of the amino acid residue of the donor is made a priority. In any
other case, criterion (b) is not considered.
[0163] Similarly, with respect to criterion (d), X-ray crystallography data from the variable
regions of a number of antibodies indicates that the amino acid residues at positions
36, 38, 43, 44, 46, 49, 87 and 98 in light chains and those at positions 37, 39, 45,
47, 91, 103 and 104 in heavy chains are frequently involved in the contact between
heavy and light chains. If any of these amino acids are predicted to be involved in
light and heavy chain contact by molecular modelling, then grafting of the amino acid
residue of the donor is given priority. In any other case, criterion (d) is not considered.
[0164] DNA encoding the variable regions of the H and L chains of a humanised anti-human
Fas antibody of the present invention may be prepared in a number of ways.
[0165] In one method, polynucleotide fragments of between 60 and 70 nucleotides in length
may be synthesised which represent partial nucleotide sequences of the desired DNA.
The synthesis process is arranged such that the ends of fragments of the sense strand
alternate with those of the antisense strand. The resulting polynucleotide fragments
can be annealed to one another and ligated by DNA ligase. In this way the desired
DNA fragment encoding the variable regions of the H and L chains of the humanised
anti-human Fas antibody may be obtained.
[0166] Alternatively, DNA coding for the entire variable region of the acceptor may be isolated
from human lymphocytes. Site directed mutagenesis, for example, may be used to introduce
restriction sites into the regions encoding the CDRs of the donor. The CDRs may then
be excised from the acceptor using the relevant restriction enzyme. DNA encoding the
CDRs of the donor can then be synthesised and ligated into the acceptor molecule,
using DNA ligase.
[0167] We prefer that DNA encoding the variable regions of the heavy and light chains of
a desired humanised anti-human Fas antibody is obtained by the technique of overlap
extension PCR [Horton,
et al., (1989), Gene,
77, 61-68, incorporated herein by reference].
[0168] Overlap extension PCR allows two DNA fragments, each coding for a desired amino acid
sequence, to be joined. For the sake of example, the two fragments are herein designated
as (A) and (B). A sense primer (C) of 20 to 40 nucleotides which anneals with a 5'-
region of (A) is synthesised, along with an antisense primer of 20 to 40 nucleotides
(D), which anneals with a 3'- region of (B). Two further primers are required. First,
a chimaeric sense primer (E), which comprises 20 to 30 nucleotides from a 3'- region
of (A) joined to 20 to 30 nucleotides from a 5'- region of (B). Secondly, an antisense
primer (F) is required, complementary to the sense primer.
[0169] A PCR reaction may be carried out using primers (C) and (F), in combination with
a DNA template containing fragment A. This allows a DNA product to be produced comprising
20 to 30 nucleotides of the 5'- region of (B) joined to the 3'-end of (A). This fragment
is termed fragment (G).
[0170] Similarly, PCR may be carried out using primers (D) and (E), in combination with
a DNA template containing fragment B. This allows a DNA product to be produced comprising
20 to 30 nucleotides of the 3'- region of (A) joined to the 5'-end of (B). This fragment
is termed fragment (H).
[0171] The (G) and (H) fragments carry complementary sequences of 40 to 60 nucleotides in
the 3'- region of (G) and 40 to 60 nucleotides in the 5'-region of (H), respectively.
A PCR reaction may be carried out using a mixture of the (G) and (H) fragments as
a template. In the first denaturation step, the DNA becomes single stranded. Most
of the DNA returns to the original form in the subsequent annealing step. However,
a part of the DNA forms a heterologous DNA duplex, due to the annealing of (G) and
(H) fragments in the region of sequence overlap. In the subsequent extension step,
the protruding single-stranded portions are repaired to result in chimaeric DNA which
represents a ligation of (A) and (B). This DNA fragment is hereinafter referred to
as (I). Fragment (I) can be amplified using primer (C) and primer (D).
[0172] In embodiments of the present invention, fragments (A) and (B) may represent DNA
encoding the CDR regions of the H and L chains of a mouse humanised anti-human Fas
monoclonal antibody, DNA coding for the FR regions of human IgG or DNA coding for
the secretion signal of human IgG.
[0173] The codon or codons which correspond to a desired amino acid are known. When designing
a DNA sequence from which to produce a protein, any suitable codon may be selected.
For example, a codon can be selected based upon the codon usage of the host. Partial
modification of a nucleotide sequence can be accomplished, for example by the standard
technique of site directed mutagenesis, utilising synthetic oligonucleotide primers
encoding the desired modifications [Mark, D. F.,
et al., (1984), Proc. Natl. Acad. Sci. USA,
81, 5662-5666]. By using selected primers to introduce a specific point mutation or
mutations, DNA coding for the variable regions of the H and L chains of any desired
humanised anti-human Fas antibody can be obtained.
[0174] Integration of DNA of the present invention thus obtained into an expression vector
allows transformation of prokaryotic or eukaryotic host cells. Such expression vectors
will typically contain suitable promoters, replication sites and sequences involved
in gene expression, allowing the DNA to be expressed in the host cell.
[0175] The five transformant strains carrying DNA encoding the variable regions of the light
chains of a humanised anti-Fas antibody of the present invention, namely
E. coli pHSGMM6 SANK 73697,
E. coli pHSGHM17 SANK 73597,
E. coli pHSGHH7 SANK 73497,
E. coli pHSHM2 SANK 70198 and
E. coli pHSHH5 SANK 70398, as well as two transformant strains carrying DNA encoding the
variable region of the heavy chain of a humanised anti-Fas antibody of the present
invention, namely
E. coli pgHSL7A62 SANK 73397 and
E. coli pgHPDHV3 SANK 70298 were deposited with the Kogyo Gijutsuin Seimei-Kogaku Kogyo Gijutsu
Kenkyujo on August 22, 1997, in accordance with the Budapest Treaty, and the accession
numbers FERM BP-6071, FERM BP-6072, FERM BP-6073, FERM-6272 and FERM-6274 (light chains),
and FERM BP-6074 and FERM BP-6273 (heavy chains), respectively, were accorded them.
Therefore, DNA coding for each subunit of the humanised anti-Fas antibody protein
can be obtained, for example, by isolating a plasmid from these deposited strains,
or by performing PCR using an extract of the deposited strains as the template.
[0176] A high purity, recombinant, anti-Fas antibody can be readily produced in high yields
by the methodology described above.
[0177] In order to check that a recombinant anti-Fas antibody, prepared as above, specifically
binds Fas, ELISA may be performed in a manner similar to that described above for
the evaluation of antibody titres in immunised mice.
[0178] The HFE7A antibody, and humanised anti-Fas antibodies of the present invention, has
the various functional properties a) to f) below, each of which may be verified by,
for example, a method described.
Inducing apoptosis in T cells expressing Fas.
[0179] Apoptosis-inducing activity in T cells expressing Fas may be assayed by removing
the thymus from a mouse which has been given a humanised anti-Fas antibody of the
present invention (also referred to hereinbelow as "the antibody"), disrupting the
thymus and contacting the cells obtained with T cells and an antibody specific for
mouse Fas, and measuring the proportion of the cells to which both antibodies bind
by flow cytometry.
[0180] Amelioration of the autoimmune symptoms of MRL gld/gld mice. The antibody is intraperitoneally
administered to a MRL gld/gld mouse. These mice carry a mutation in the gene coding
for Fas ligand and exhibit symptoms resembling autoimmune diseases [
c.f. Shin Yonehara (1994), Nikkei Science Bessatsu,
110, 66-77). The antibody is capable, in many instances, of preventing, or at least ameliorating,
swelling of the limbs, which is one of the autoimmune disease-like symptoms.
Failure to induce hepatic disorders.
[0181] Peripheral blood is drawn from a BALB/c mouse which has been given the antibody and
blood levels of the enzymes glutamic-oxaloacetic transaminase (GOT) and glutamic-pyruvic
transaminase (GPT) are measured, using an automated analyser (for example, Model 7250;
Hitachi Seisakusyo, K. K.) together with the reagent for the analyser (for example,
transaminase-HRII; Wako Pure Chemical Industries, Ltd.). Failure to cause elevated
blood GOT and GPT levels indicate that the antibody does not induce hepatic disorders
upon administration
in vivo.
[0182] Therapeutic or prophylactic effect on fulminant hepatitis. In an experimental system
in which fulminant hepatitis is induced in mice by administering the anti-mouse Fas
monoclonal antibody Jo2, the effects of administration of the above antibody simultaneously
with Jo2 or after administration of Jo2 can be examined. Antibodies of the invention
can prevent, to a large degree, all of the effects of Jo2 in mice, thereby demonstrating
a protecting effect in the liver.
[0183] Preventative effect on the onset of collagen-induced arthritis. The effects of administration
of the antibody on a rheumatoid arthritis model elicited by administering to a mouse
an emulsion comprising collagen and Freund's complete adjuvant are examined. The antibody
has prophylactic properties.
Induction of apoptosis in synovial cells from a rheumatoid arthritis patient.
[0184] Synovial cells obtained from an affected region of a patient with rheumatoid arthritis
are cultured and the viability of the cells when the above antibody is contained in
the culture medium is examined. Surprisingly, proliferation of the synovial cells
is inhibited.
[0185] Thus, antibodies of the present invention, unlike previous, known, anti-Fas monoclonal
antibodies, not only protect normal cells, but also kill abnormal cells. Accordingly,
they are useful as prophylactic and therapeutic agents for diseases attributable to
abnormalities of the Fas/Fas ligand system.
[0186] The ability of the proteins of the present invention to induce apoptosis can be established,
for example, by culturing cells such as the human lymphocyte cell line HPB-ALL [Morikawa,
S.,
et al, (1978), Int. J. Cancer,
21, 166-170] or Jurkat (American Type Culture No. TIB-1520) in medium in which the test
sample has been or will be added. The survival rate may then be determined by, for
example, an MTT assay [Green, L. M.,
et al., (1984), J. Immunological Methods,
70, 257-268].
[0187] Antibodies of the present invention can be used in various pharmaceutical preparations
in respect of the various disease conditions connected with abnormalities of the Fas/Fas
ligand system, such as those listed above.
[0188] Such a prophylactic or therapeutic agent may be administered in any of a variety
of forms. Suitable modes of administration include oral administration, such as by
tablets, capsules, granules, powders and syrups, or parenteral administration, such
as by any suitable form of injection, including intravenous, intramuscular and intradermal,
as well as infusions and suppositories. Thus, the present invention also provides
methods and therapeutic compositions for treating the conditions referred to above.
Such compositions typically comprise a therapeutically effective amount of the protein
of the present invention in admixture with a pharmaceutically acceptable carrier therefor,
and may be administered in any suitable manner, such as by parenteral, intravenous,
subcutaneous or topical administration.
[0189] In particular, where the condition to be treated is local, then it is preferred to
administer the protein as close as possible to the site. For example, serious rheumatic
pain may be experienced in major joints, and the protein may be administered at such
locations.
[0190] Systemically administered proteins of the present invention are particularly preferably
administered in the form of a pyrogen-free, therapeutically, particularly parenterally,
acceptable aqueous solution. The preparation of such pharmaceutically acceptable protein
solutions with regard to aspects such as pH, isotonicity, stability and the like,
is well within the skill of the person skilled in the art. In addition, the compositions
of the present invention may comprise such further ingredients as may be deemed appropriate,
such as cell growth retardants and other medicaments.
[0191] It will be appreciated that the dosage will vary, depending on factors such as the
condition, age and body weight of the patient, but usually the dosage for oral administration
to an adult ranges between about 0.1 mg and 1,000 mg per day, which may be administered
in a single dose or several divided doses. The dosage for parenteral administration
typically ranges between 0.1 mg and 1,000 mg, which may be administered by a subcutaneous,
intramuscular or intravenous injection (or injections).
[0192] A suitable oral administration form of the humanised anti-Fas antibody of the present
invention is as an ampoule of a sterile solution or suspension in water or a pharmaceutically
acceptable solution. Alternatively, a sterile powder (preferably, prepared by lyophilisation
of the humanised anti-Fas antibody) may be filled into an ampoule, which may then
be diluted with a pharmaceutically acceptable solution for use.
[0193] Owing to the fact that the antibodies of the present invention used in human treatment
have been humanised, toxicity is very low.
[0194] In the following Examples, there is made reference to the accompanying Figures, a
summary of which is as follows:
[0195] Figure 1 is a diagram depicting the construction of phFas-AIC2.
[0196] Figure 2 is a diagram depicting the construction of pME-H and pME-L.
[0197] Figure 3 is a figure showing the results of ELISA for the determination of the epitope
recognised by the HFE7A antibody.
[0198] Figure 4 is a figure showing the results of competitive assay for the determination
of the epitope recognised by the HFE7A antibody.
[0199] Figure 5 is a figure showing the results of toxicity testing of HFE7A.
[0200] Figure 6 is a figure showing the results of testing with a fulminant hepatitis model.
[0201] Figure 7 is a figure showing the results of testing of prevention of collagen-induced
arthritis.
[0202] Figure 8 is a summary of the first step PCR for the production of VHH-DNA.
[0203] Figure 9 is a summary of the second step PCR for the production of VHH-DNA.
[0204] Figure 10 is a summary of the third step PCR for the production of VHH-DNA.
[0205] Figure 11 is a summary of the construction of the expression plasmid carrying VHH-DNA
fragment.
[0206] Figure 12 is a summary of the first step PCR for the production of VHM-DNA.
[0207] Figure 13 is a summary of the second step PCR for the production of VHM-DNA.
[0208] Figure 14 is a summary of the construction of the expression plasmid carrying VHM-DNA
fragment.
[0209] Figure 15 is a summary of the first step PCR for the production of VMM-DNA.
[0210] Figure 16 is a summary of the second step PCR for the production of VMM-DNA.
[0211] Figure 17 is a summary of the third step PCR for the production of VMM-DNA.
[0212] Figure 18 is a summary of the construction of the expression plasmid carrying VMM-DNA
fragment.
[0213] Figure 19 shows the positions to which the light chain sequencing primers bind.
[0214] Figure 20 is a summary of the first step PCR for the production of VD-DNA.
[0215] Figure 21 is a summary of the second step PCR for the production of VD-DNA.
[0216] Figure 22 is a summary of the third step PCR for the production of VD-DNA.
[0217] Figure 23 is a summary of the construction of the expression plasmid carrying VD-DNA
fragment.
[0218] Figure 24 is a summary of the construction of the DNA (IG5'-DNA) fragment comprising
CH1 region of human IgG1 and an intron.
[0219] Figure 25 is a summary of the construction of the genomic DNA(IG3'-DNA)fragment comprising
hinge region, CH2 region, CH3 region and introns of human IgG1.
[0220] Figure 26 is a summary of the construction of the expression plasmid pEg7AH-H.
[0221] Figure 27 shows the positions to which the heavy chain sequencing primers bind.
[0222] Figure 28 is a graph depicting the binding activity of the humanised anti-Fas antibodies
to the human Fas fusion protein.
[0223] Figure 29 shows competitive inhibition of HFE7A and the humanised anti-Fas antibodies
for the human Fas fusion protein.
[0224] Figure 30 shows the cytotoxicity of the humanised HFE7A to WR19L12a.
[0225] Figure 31 shows the outline of the first stage PCR for the preparation of LPDHH-DNA.
[0226] Figure 32 shows the outline of the second stage PCR for the production of LPDHH-DNA.
[0227] Figure 33 shows the outline of the third stage PCR for the production of LPDHH-DNA.
[0228] Figure 34 shows the outline of the construction of an expression plasmid carrying
the LPDHH-DNA fragment.
[0229] Figure 35 shows the outline of the first stage PCR for the preparation of LPDHM-DNA.
[0230] Figure 36 shows the outline of the second stage PCR for the production of PDHM-DNA.
[0231] Figure 37 shows the outline of the third stage PCR for the preparation of LPDHM-DNA.
[0232] Figure 38 shows the outline of the construction of a plasmid carrying the LPDHM-DNA
fragment.
[0233] Figure 39 shows the outline of the first stage PCR for the preparation of HPD1.2-DNA.
[0234] Figure 40 shows the outline of the second stage PCR for the preparation of HPD1.2-DNA.
[0235] Figure 41 shows the construction of a plasmid carrying the HPD1.2-DNA fragment.
[0236] Figure 42 shows where primers for sequencing pEgPDHV3-21 bind.
[0237] Figure 43 shows the construction of high-level expression vectors for the humanised
light chains.
[0238] Figure 44 shows the construction of high-level expression vectors for humanised heavy
chains.
[0239] Figure 45 shows the binding activity for the human Fas fusion protein for the supernatants
of Example 12.
[0240] Figure 46 shows the results of competitive inhibition of HFE7A antibody by the supernatants
of Example 12.
[0241] Figure 47 shows the results of inducing apoptosis in T cells by culture supernatant
fluids of Example 12.
[0242] The invention will now be illustrated in more detail with reference to the following
Examples, the Examples being illustrative of, but not binding upon, the present invention.
The Examples represent specific embodiments of the present invention.
[0243] Any methods, preparations, solutions and such like which are not specifically defined
may be found in 'Molecular cloning - A laboratory Handbook'
(supra, incorporated herein by reference). All solutions are aqueous and made up in sterile
deionised water, unless otherwise specified.
REFERENCE EXAMPLE 1
Preparation of Fas Antigen
[0244] In order to obtain a soluble version of human Fas lacking the transmembrane domain,
an expression vector was constructed. This vector was designed to encode a fusion
protein (the "Fas fusion protein") comprising the extracellular domain of human Fas
fused to the extracellular domain of the mouse interleukin 3 (IL3) receptor [
c.f. Gorman, D. M.
et al., (1990), Proc. Natl. Acad. Sci. USA,
87, 5459-5463]. DNA encoding the human Fas fusion protein was prepared from this vector
by PCR. The construction of the vector and preparation of DNA was as follows.
a) Template
[0245] The templates used for the PCR to construct the insert encoding the fusion protein
were two plasmids. The first plasmid, pME18S-mFas-AIC [
c.f. Nishimura, Y.
et al., (1995), J. Immunol.
154, 4395-4403], was a DNA expression plasmid vector encoding a fusion protein, comprising
the extracellular domain of mouse Fas and the extracellular domain of the mouse IL3
receptor. The second plasmid, pCEV4 [
c.f. Itoh, N.,
et al., (1991), Cell,
66, 233-243], carried cDNA encoding human Fas.
b) PCR Primers
[0246] The following oligonucleotide primers were synthesised:

[0247] Unless otherwise specified, all oligonucleotides in these Examples were synthesised
using an automated DNA synthesiser (Model 380B; Perkin Elmer Japan, Applied Biosystems
Division) following the instructions supplied with the manual [
c.f. Matteucci, M. D. and Caruthers, M. H., (1981), J. Am. Chem. Soc.,
103, 3185-3191]. After synthesis, each oligonucleotide (primer) was removed from the support,
deprotected, and the resulting solution lyophilised to obtain a powder. This powder
was then dissolved in distilled water and stored at -20°C until required.
c) First Stage of PCR
[0248] i) A DNA fragment, designated HFAS and encoding the extracellular domain of human
Fas, was prepared as follows. PCR was performed using the LA (Long and Accurate) PCR
Kit (Takara Shuzo Co., Ltd., Japan).
Composition of the PCR reaction solution: |
template pCEV4 DNA, 20 ng; |
primer N1, 0.5 µg; |
primer C3N, 0.5 µg; |
10× concentrated LA PCR buffer (provided with the kit), 25 µl; |
dNTP's (provided with the kit), 25 µl; and |
LA Tag polymerase (provided with the kit), 12.5 units. |
[0249] Sterile distilled water was added to the solution to a total volume of 250 µl. Unless
otherwise specified, dNTP's are provided as an equimolar mixture of dATP, dCTP, dGTP
and dTTP.
[0250] The PCR reaction was conducted as follows. The solution was first heated at 94°C
for 2 minutes, after which a cycle of heating to 94°C for 1 minute, 55°C for 1 minute
and 72°C for 2 minutes, was repeated 30 times. After completion of this procedure,
the reaction solution was heated at 72°C for 10 minutes (in all PCR reactions described
in the Reference Examples, the temperature was regulated using the GeneAmp PCR system
9600; Perkin Elmer, Japan).
[0251] ii) A DNA fragment, designated MAIC and encoding the extracellular domain of the
mouse IL3 receptor, was prepared as follows.
Composition of the PCR reaction solution: |
template pME18S-mFas-AIC DNA, 20 ng; |
primer N3N, 0.5 µg; |
primer CTN2, 0.5 µg; |
10-fold concentrated LA PCR buffer, 25 µl; |
dNTP's, 25 µl; |
LA Tag polymerase, 12.5 units; and |
Sterile distilled water to a total volume of 250 µl. |
The PCR reaction was conducted as above.
[0252] The amplified HFAS and MAIC DNA fragments, thus obtained, were separately first subjected
to phenol extraction, then to ethanol precipitation [these two processes are defined
in Example 2 (2) 3) a) below], after which the purified fragments were electrophoresed
on a 5% w/v polyacrylamide gel. The gel was stained with 1 µg/ml of ethidium bromide
to show up DNA under UV light. The bands determined to contain the desired DNA fragments
were cut out using a razor blade and the DNA was electroeluted therefrom using an
Amicon Centriruter equipped with the centrifuge tube-type ultrafiltration device Centricon-10
(Amicon). After electroelution, the Centricon-10 unit containing the eluate was discarded
and centrifuged at 7,500 x g for about 1 hour to concentrate the DNA. The DNA was
precipitated with ethanol and then dissolved in 20 µl of distilled water.
d) Second stage of PCR
[0253] The FASAIC DNA fragment encoding the human Fas fusion protein (human Fas/murine IL3
receptor) was prepared as follows.
Composition of the PCR reaction solution: |
template DNA solution HFAS, 20 µl; |
template DNA solution MAIC, 20 µl; |
primer N1, 0.5 µg; |
primer CTN2, 0.5 µg; |
10-fold concentrated LA PCR buffer, 25 µl; |
dNTP's, 25 µl; |
LA Tag polymerase, 12.5 units; and |
Sterile distilled water to a total volume of 250 µl. |
The PCR reaction was conducted as in c) above.
[0254] The amplified FASAIC DNA fragment, thus obtained, was first extracted with phenol,
then precipitated with ethanol, after which it was electrophoresed on a 1% w/v polyacrylamide
gel. The gel was stained with 1 µg/ml of ethidium bromide to show up DNA under UV
light. The band determined to contain the desired DNA fragment was cut out using a
razor blade and the DNA was electroeluted therefrom using an Amicon Centriruter equipped
with a Centricon-10 device, as described above. After electroelution, the Centricon-10
unit containing the eluate was removed and centrifuged at 7,500 x g for about 1 hour
to concentrate the DNA, and the DNA was then precipitated with ethanol and finally
dissolved in 50 µl of distilled water.
e) Construction of vectors
[0255] The whole of the FASAIC DNA, obtained in d) above, was digested with the restriction
enzymes EcoRI and XbaI, then extracted with a phenol/chloroform mixture (50% v/v phenol
saturated with water, 48% v/v chloroform, 2% v/v isoamyl alcohol), then precipitated
with ethanol. The resulting precipitate was suspended in 2 µl of sterile deionised
water.
[0256] Two microgrammes of plasmid pME18S-mFas-AIC were digested with the restriction enzymes
EcoRI and XbaI and dephosphorylated [the dephosphorylation process is defined in Example
2 (2) 3) a) below]. The resulting DNA fragment was then ligated with the restriction-digested
FASAIC DNA obtained above using a ligation kit (Takara Shuzo Co., Ltd.). The ligation
product was then used in the transformation of
E. coli strain DH5α (Gibco BRL) as described by Hanahan [Hanahan, D., (1983), J. Mol. Biol.,
166, 557-580]. Plasmid was then obtained from the transformed
E. coli by the alkaline-SDS method [
c.f. Maniatis, T.,
et al., (1989), in Molecular Cloning: A Laboratory Manual (2nd Edition), Cold Spring Harbor
Laboratory, NY]. The plasmid thus obtained was designated phFas-AIC2.
[0257] This plasmid was next further purified using a large scale plasmid preparation kit
(MaxiPrep DNA purification system, Promega). 20 µg of purified plasmid DNA was precipitated
with ethanol and the precipitate was dissolved in 20 µl of sterile Dulbecco's PBS(-)
medium (hereinafter referred to as PBS; Nissui Pharmaceutical Co., Ltd.).
f) Expression
[0258] COS-1 cells (American Type Culture Collection No. CRL-1650) were grown to semi-confluence
in a culture flask (culture area: 225 cm
2; Sumitomo Bakelite, K. K.) containing Dulbecco's modified Eagle medium (DMEM; Nissui
Pharmaceutical Co., Ltd., Japan) supplemented with 10% v/v foetal calf serum (FCS;
Gibco) at 37°C under an atmosphere of 5% v/v gaseous CO
2. The growth medium was then discarded, and 3 ml of an aqueous solution of 5 g/l trypsin
and 2 g/l ethylenediaminetetraacetic acid (trypsin-EDTA solution; Sigma Chemicals,
Co.) was added to the flask, which was then incubated at 37°C for 3 minutes to detach
the cells from the flask.
[0259] The harvested cells were suspended in PBS, washed twice with PBS, and adjusted to
6 x 10
7 cells/ml with PBS. Twenty µl of the resulting cell suspension (1.2 x 10
6 cells) were mixed with 20 µl of the plasmid solution prepared above, and the mixture
was introduced into a chamber with electrodes set 2 mm apart (Shimadzu Seisakusyo,
K. K.). The chamber was next loaded into gene transfection apparatus (GTE-1; Shimadzu
Seisakusyo, K. K.) and pulses of 600 V, duration 30 µsec, were applied twice, 1 second
apart. The cell-DNA mixture in the chamber was then introduced into 10 ml of DMEM
supplemented with 10% v/v FCS and incubated in a culture flask (culture area: 75 cm
2) under 7.5% v/v CO
2 at 37°C for 24 hours. After this time, the culture supernatant was discarded and
the cells were washed with serum-free DMEM. Subsequently, 10 ml of serum-free DMEM
were added to the washed cells and the mixture was further incubated under 7.5% v/v
CO
2 at 37°C for 24 hours, after which time the supernatant was recovered.
[0260] The recovered supernatant was dialyzed against 10 mM Tris-HCl (pH 8.0) in a dialysis
tube (exclusion m.w. 12,000 - 14,000; Gibco BRL), and human Fas fusion protein was
then further partially purified using FPLC apparatus by Pharmacia under the following
conditions:
Column: Resource Q column (trademark; φ6.4 x 30 mm; |
Pharmacia); |
Eluent: 10 mM Tris-HCl (pH 8.0); |
Flow rate: 5 ml/min; |
Elution: NaCl 0.1 M - 0.3 M, linear gradient in 30 minutes. |
[0261] The eluate was collected in fractions of 5 ml and these were assayed for Fas gene
expression product by ELISA (Enzyme-Linked Immunosorbent Assay), as described below.
First, 100 µl of each fraction were separately placed into wells of a 96-well microplate
(Costar) and incubated at 37°C for 1 hour. After this time, the solution in the wells
was tipped off, and the plate was washed 3 times with 100 µl/well of PBS containing
0.1% v/v Tween 20 (PBS-Tween). After washing, PBS containing 2% w/v bovine serum albumin
("BSA") was added in quantities of 100 µl/well, and the plate was then incubated at
37°C for 1 hour.
[0262] After this time, the wells were washed a further 3 times with 100 µl/well of PBS-Tween,
after which 100 µl/well of a solution of anti-mouse IL-3 receptor β subunit monoclonal
antibody HC (1 mg/ml; Igaku Seibutsugaku Kenkyujo, K. K.) diluted 100-fold with PBS-Tween
was added to each well, and the plate was once again incubated at 37°C for 1 hour.
The wells were then washed 3 times with 100 µl/well of PBS-Tween, and then 100 µl/well
of horse radish peroxidase-labeled anti-mouse immunoglobulin antibody (Amersham) diluted
2000-fold with PBS-Tween was added to each well, and the plate was incubated at 37°C
for another 1 hour, after which each well was again washed 3 times with 100 µl PBS-Tween.
Horse radish peroxidase substrate (BioRad) was then added in a quantity of 100 µl/well
and left for 5 minutes. After this time, the absorbance at 415 nm was measured with
a microplate reader (Model 450; BioRad). The 19th to 23rd fractions, inclusive, which
had high absorbance values at this wavelength, were collected to prepare the crude
human Fas fusion protein sample.
REFERENCE EXAMPLE 2
Immunization of mice and preparation of hybridoma
(2-1) Immunization
[0263] A sample of 1 ml of the crude human Fas fusion protein solution obtained in Reference
Example 1 above (total protein: 100 µg) was taken and, to this, were added 25 µl of
2N HCl, 250 µl of 9% w/v potash alum (final concentration: 1.1% w/v) and 25 µl of
2N NaOH. The resulting mixture was adjusted to a pH of between about 6.5 and 7.0 by
the addition of about 120 µl of an aqueous solution of 10%(w/v) sodium hydrogencarbonate
and left to stand at room temperature for about 30 minutes. After this time, 200 µl
of killed
Bordetella pertussis (Wako Pure Chemical Industries, Ltd.; 1.2 x 10
11 cells/ml) were added to the mixture in order to activate the T cells, and the mixture
was administered intraperitoneally to a Fas knock-out mouse. The mouse used was prepared
in accordance with the method described by Senju
et al. [
c.f. Senju, S.
et al., (1996), International Immunology,
8, 423]. The mouse was given an intraperitoneal booster injection, after 2 weeks, of
crude human Fas fusion protein only (20 µg protein / mouse).
(2-2) Cell fusion
[0264] On the third day after the booster injection, the spleen was removed form the mouse
and put into 10 ml of serum-free RPMI 1640 medium (10.4 g/l RPMI1640 "Nussui" 1; Nissui
Pharmaceutical Co., Ltd.) containing 20 mM HEPES buffer (pH 7.3), 350 mg/ml sodium
hydrogencarbonate, 0.05 mM β-mercaptoethanol, 50 units/ml penicillin, 50 µg/ml streptomycin
and 300 µg/ml L-glutamic acid, and disrupted by passing the organ through a mesh (Cell
Strainer; Falcon) using a spatula. The resulting cell suspension was centrifuged to
pelletise the spleen cells which were then washed twice with serum-free RPMI medium.
The washed cells were then suspended in serum-free RPMI medium and counted.
[0265] In the meantime, myeloma NS1 cells (American Type Culture Collection TIB-18) had
been grown to a cell density not exceeding 1 x 10
8 cells/ml in ASF104 medium (Ajinomoto, K. K.) containing 10% v/v FCS (Gibco BRL) ("ASF
medium with serum") at 37°C under 5% v/v CO
2, and these were likewise disrupted, washed, suspended and counted.
[0266] An amount of the NS1 cell suspension calculated to contain 3 x 10
7 cells was mixed with an amount of the spleen cell suspension calculated to contain
3 x 10
8 cells. The resulting mix was centrifuged and the supernatant discarded. The following
steps of cell fusion were performed whilst, all the time, keeping the plastic tube
containing the pellet at 37°C in a beaker of warm water.
[0267] One ml of 50%(w/v) polyethylene glycol 1500 (Boehringer Manheim) was then slowly
added to the tube, all the while stirring the pellet using the tip of a pipette. Subsequently,
1 ml of serum-free RPMI medium, prewarmed to 37°C, was slowly added in 2 portions,
followed by the addition of a further 7 ml of serum-free RPMI medium. The resulting
mix was then centrifuged, the supernatant was discarded and 10 ml of hypoxanthin aminopterin
thymidine medium ("HAT medium"; Boehringer Manheim) containing 10% v/v FCS were added
while stirring gently with the tip of a pipette. A further 20 ml of HAT medium containing
10% v/v FCS was added, and the suspension was dispensed into 96-well cell culture
microplates at 100 µl/well and incubated at 37°C under 5% v/v CO
2. After 7 or 8 days, 100 µl/well of fresh HAT medium were used to replace medium in
any wells exhibiting a yellowish hue. The fusion cells from these wells were screened
by limiting dilution as described below.
(2-3) Limiting dilution
[0268] Thymuses from 4 to 10 week old female BALB/c mice (from Japan SLC, Inc.) were removed,
disrupted on a mesh (Cell Strainer; Falcon) as described above, and the disrupted
cells were washed twice with hypoxanthin thymidine medium ("HT medium"; Boehringer
Manheim) containing 10% v/v FCS. An amount of thymus cells corresponding to those
from one mouse were suspended in 30 ml of HT medium containing 10% v/v FCS to produce
a feeder cell suspension. The fusion cell preparation obtained above (2-2) was diluted
with this feeder cell suspension 10- to 100-fold, and further diluted serially with
feeder cell suspension to make suspensions having fusion cell densities of 5, 1 and
0.5 cells/ml. The thus prepared samples were dispensed into wells of 96-well cell
culture microplates at 100 µl/well and incubated for 5 days at 37°C under 5% v/v CO
2.
(2-4) Screening
[0269] WR19L12a cells [
c.f. Itoh, N.
et al., (1991), Cell,
66, 233-243] were propagated by incubation in RPMI1640 medium containing 10% v/v FCS
at 37°C under 5% v/v CO
2. WR19L12a cells are derived from mouse T lymphoma WR19L cells (American Type Culture
Collections TIB-52) and have been modified to express a gene encoding human Fas. The
suspension of propagated WR19L12a cells was adjusted to a cell density of 1 x 10
7 cells/ml and aliquots of 50 µl/well were dispensed into the wells of a 96-well microplate,
the wells having U-shaped bottoms (Nunc) and the plate was centrifuged (90 x g, 4°C,
10 minutes). The supernatant was discarded and 50 µl/well of culture supernatant obtained
from the fusion cells cultured in 2-3 above were added to the wells, with mixing.
[0270] The resulting mixtures were kept standing on ice for 1 hour and then centrifuged
(90 x g, 4°C, 10 minutes), and the supernatant removed. The pellets were each washed
twice with 100 µl/well of flow cytometry buffer [PBS containing 5% v/v FCS and 0.04%(w/v)
sodium azide]. A secondary antibody [50 µl of fluorescein-5-isothiocyanate (FITC)
labeled goat anti-mouse IgG antibody IgG fraction (Organon Technika) diluted 500-fold]
was added to the washed cells, and the mixture was kept standing on ice for 1 hour.
After further centrifugation (90 x g, 4°C, 10 minutes), and removal of the supernatant,
the pellet was washed twice with 100 µl/well of flow cytometry buffer, and the cells
were fixed by adding 50 µl of 3.7% v/v formaldehyde solution and standing on ice for
10 minutes. After centrifugation (90 x g, 4°C, 10 minutes) and removal of the supernatant,
the pellets were again washed with 100 µl/well of flow cytometry buffer, and suspended
in a further 100 µl/well of flow cytometry buffer to produce the flow cytometry samples.
[0271] The intensity of FITC fluorescence of the cells in each sample was measured with
a flow cytometer (Epics Elite; Coulter; excitation wave length: 488 nm; detection
wave length: 530 nm) and fusion cells were selected from samples which had FITC fluorescence
intensities clearly higher (FITC fluorescence intensities of about 100 to 1,000) than
those for control WR19L12a cells to which no fusion cell supernatant had been added
(FITC fluorescence intensity of about 0.3).
(2-5) Cloning
[0272] The steps described in (2-3) and (2-4) above were repeated 5 times for the cells
selected in (2-4), thereby enabling the selection of several hybridoma clones which
each produced a single antibody binding WR19L12a but not binding WR19L. Binding of
these antibodies to mouse Fas was examined by using an assay similar to the one described
in (2-4), but using L5178YA1 cells. The L5178YA1 cell line expresses murine Fas. L5178YA1
is a cell line produced by transfecting L5178Y cells with a mouse Fas expression vector.
L5178Y cells (American Type Culture Collection No. CRL-1722) express almost no Fas.
[0273] As a result of this selection procedure, a mouse-mouse hybridoma, designated HFE7A
and producing an antibody binding to L5178YA1 cells, but not L5178Y cells, was obtained.
This hybridoma, HFE7A, was deposited with Kogyo Gijutsuin Seimei Kogaku Kogyo Gijutsu
Kenkyujo on February 20, 1997, in accordance with the Budapest Treaty for the Deposit
of Microorganisms, and has been assigned accession No. FERM BP-5828.
[0274] The subclass of the antibody produced by the mouse-mouse hybridoma HFE7A (hereinafter
referred to simply as "HFE7A") was demonstrated to be IgG1, κ, after testing with
a monoclonal antibody isotyping kit (Pierce).
REFERENCE EXAMPLE 3
Purification of HFE7A Monoclonal Antibody
[0275] The mouse-mouse hybridoma HFE7A obtained in Reference Example 2 (FERM BP-5828) was
grown to a cell density of 1 x 10
6 cells/ml by incubation in 1 l of ASF medium, containing 10% v/v FCS, at 37°C under
5% v/v CO
2. The culture was then centrifuged (1,000 r.p.m., 2 minutes) and the supernatant discarded.
The cell pellet was washed once with serum-free ASF medium, suspended in 1 l of serum-free
ASF medium and incubated for 48 hours at 37°C under 5% v/v CO
2. After this time, the culture was centrifuged (1,000 r.p.m. for 2 minutes) to recover
the supernatant. This supernatant was then placed in a dialysis tube (exclusion m.w.:
12,000 - 14,000; Gibco BRL), and dialyzed against 10 volumes of 10 mM sodium phosphate
buffer (pH 8.0). Partial purification of IgG from the inner solution was achieved
using a high performance liquid chromatography apparatus (FPLC system; Pharmacia)
under the following conditions:
column: DEAE-Sepharose CL-6B column (column size 10 ml; Pharmacia);
eluent: 10 mM sodium phosphate buffer (pH 8.0);
flow rate: 1 ml/min;
elution: linear gradient of 1 M NaCl (0 to 50%, 180 min).
[0276] The eluate was collected in fractions of 5 ml and each fraction was assayed for anti-Fas
antibody titre by ELISA using the human Fas fusion protein prepared above.
[0277] First, 100 µl/well of the crude human Fas fusion protein solution prepared in Reference
Example 1 was introduced into the wells of a 96-well ELISA microplate. After incubation
at 37°C for 1 hour, the solution was discarded and the wells were each washed 3 times
with 100 µl/well of PBS-Tween. Then, 100 µl/well of PBS containing 2% BSA was added
and incubated at 37°C for 1 hour. After this time, the cells were washed 3 times with
100 µl/well of PBS-Tween, and then 100 µl samples of the fractions to be assayed were
added to the wells, and the plate incubated at 37°C for 1 hour. Next, after washing
each of the wells 3 times with 100 µl/well of PBS-Tween, 100 µl/well of horse radish
peroxidase labeled anti-mouse immunoglobulin antibody (Amersham), diluted 2000-fold
with PBS-Tween, were added and allowed to react at 37°C for 1 hour. After this time,
each well was washed 3 times with 100 µl/well PBS-Tween. Horse radish peroxidase substrate
(BioRad) was added in a quantity of 100 µl/well and left for 5 minutes before reading
the absorbance of each well at 415 nm with a microplate reader.
[0278] The 21st to 30th fractions, inclusive, which had high absorbance values, were pooled
and applied to two antibody affinity purification columns (HighTrap Protein G column,
column volume 5 ml; Pharmacia). After washing the columns with equilibrium buffer
[20 mM sodium phosphate buffer (pH 7.0), 25 ml/column], antibody was eluted with 15
ml per column of elution buffer [0.1 M glycine-HCl (pH 2.7)]. The eluate was collected
in tubes each containing 1.125 ml of 1 M Tris-HCl (pH 9.0) and centrifuged at 3,000
x g at 4°C for 2 hours in the top of a centrifuge tube-type ultrafiltration device
(CentriPrep 10; Grace Japan, K. K.) immediately after completion of elution. The filtrate
recovered in the bottom of the device was discarded, and 15 ml of PBS was added to
the top and the preparation was once again centrifuged at 3,000 x g at 4°C for 2 hours.
These same steps were repeated five times, in all. The 5th centrifugation was stopped
when the volume of the solution remaining in the top reached 0.5 ml, and this was
retained as the HFE7A sample.
Reference Example 4
cDNA Cloning
(4-1) Preparation of poly(A)+ RNA
[0279] Cells of the mouse-mouse hybridoma HFE7A (FERM BP-5828), obtained in Reference Example
2, were grown to a cell density of 1 x 10
6 cells/ml in 1 1 of ASF medium supplemented with 10% v/v FCS at 37°C under 5% v/v
CO
2. These cells were harvested by centrifugation and lyzed in the presence of guanidinium
thiocyanate solution [4 M guanidinium thiocyanate, 1% v/v Sarcosyl, 20 mM EDTA, 25
mM sodium citrate (pH 7.0), 100 mM 2-mercaptoethanol, 0.1% v/v Antifoam A] and the
lysate was recovered. Isolation of poly(A)
+ RNA was performed essentially as described in "Molecular Cloning A Laboratory Manual"
[
c.f. Maniatis, T.,
et al., (1982), pp. 196-198]. More specifically, the procedure was as follows.
[0280] The recovered cell lysate was sucked into and exhausted from a 10 ml-syringe equipped
with a 21-gauge needle, several times. The cell lysate was layered over 3 ml of an
aqueous solution of 5.7 M caesium chloride, 0.1 M EDTA solution (pH 7.5) in a polyallomer
centrifuge tube for the bucket of a RPS-40T rotor (Hitachi Seisakusyo, K. K.). The
lysate was then centrifuged at 30,000 r.p.m. at 20°C for 18 hours, and the resulting
pellet was dissolved in 400 µl of distilled water and subjected to ethanol precipitation.
The resulting precipitate was again dissolved in 400 µl of distilled water, mixed
with an equal volume of a mixture of chloroform and 1-butanol (4:1, v/v), whereafter
the aqueous layer was recovered after centrifugation at 5000 r.p.m. for 10 minutes.
This aqueous layer was again precipitated with ethanol and the precipitate was dissolved
in 600 µl of distilled water. The resulting solution was retained as the total RNA
sample.
[0281] Poly (A)
+ RNA was purified from 600 µg (dry weight) of the total RNA sample, obtained above,
by oligo(dT) cellulose chromatography.
[0282] More specifically, the total RNA was dissolved in 200 µl of adsorption buffer [0.5
M NaCl, 20 mM Tris-HCl (pH 7.5), 1 mM EDTA, 0.1% v/v sodium dodecyl sulphate (SDS)],
then heated at 65°C for 5 minutes, and then applied to a column of oligo(dT) cellulose
(Type 7; Pharmacia) which had been loaded with adsorption buffer. Poly(A)
+ RNA was eluted and recovered from the column using elution buffer [10 mM Tris-HCl
(pH 7.5), 1 mM EDTA, 0.05% v/v SDS]. A total of 100 µg of poly(A)
+ RNA fraction was obtained by this procedure.
(4-2) Determination of the N-terminal amino acid sequences of the heavy and light chains
of HFE7A
[0283] Ten microlitres of the solution containing the anti-human Fas antibody HFE7A, obtained
in Reference Example 3, was subjected to SDS-polyacrylamide gel electrophoresis ("SDS-PAGE"),
using a gel concentration of 12% w/v, 100 V constant voltage, for 120 minutes. After
electrophoresis the gel was immersed in transfer buffer [25 mM Tris-HCl (pH 9.5),
20% methanol, 0.02% v/v SDS] for 5 minutes. After this time, the protein content of
the gel was transferred to a polyvinylidene difluoride membrane ("PVDF membrane";
pore size 0.45 µm; Millipore, Japan), presoaked in transfer buffer, using a blotting
apparatus (KS-8451; Marysol) under conditions of 10 V constant voltage, 4°C, for 14
hours.
[0284] After this time, the PVDF membrane was washed with washing buffer [25 mM NaCl, 10
mM sodium borate buffer (pH 8.0)], then stained in a staining solution (50% v/v methanol,
20% v/v acetic acid and 0.05% w/v Coomassie Brilliant Blue) for 5 minutes to locate
the protein bands. The PVDF membrane was then destained with 90% v/v aqueous methanol,
and the bands corresponding to the heavy chain (the band with the lower mobility)
and light chain (the band with the higher mobility) previously located on the PVDF
membrane were excised and washed with deionised water.
[0285] The N-terminal amino acid sequences of the heavy and light chains could now be determined
by the Edman automated method [
c.f. Edman, P.,
et al., (1967), Eur. J. Biochem.,
1, 80] using a gas-phase protein sequencer (PPSQ-10; Shimadzu Seisakusyo, K. K.).
[0286] The N-terminal amino acid sequence of the band corresponding to the heavy chain was
determined to be: Gln-Xaa-Gln-Leu-Gln-Gln-Pro-Gly-Ala-Glu-Leu (SEQ ID No. 16 of the
Sequence Listing);
and the N-terminal amino acid sequence of the band corresponding to the light chain
was determined to be:
Asp-Ile-Val-Leu-Thr-Gln-Ser-Pro-Ala-Ser-Leu-Ala-Val-Ser-Leu-Gly-Gln-Arg-Ala-Thr-Ile-Ser
(SEQ ID No. 17 of the Sequence Listing).
[0287] Comparison of these amino acid sequences with the database of amino acid sequences
of antibodies produced by Kabat
et al. [
c.f. Kabat E. A.,
et al., (1991), in "Sequences of Proteins of Immunological Interest Vol.II," U.S. Department
of Health and Human Services] revealed that the heavy chain (γ1 chain) and the light
chain (κ chain) of HFE7A belonged to subtypes 2b and 3, respectively. Based on these
findings, oligonucleotide primers were synthesised which would be expected to hybridise
with portions of the 5'-untranslated regions and the very ends of the 3'-translated
regions of the genes belonging to these mouse subtypes [
c.f. Kabat
et al., ibid.; Matti Kartinen
et al., (1988),
25, 859-865; and Heinrich, G.,
et al., (1984), J. Exp. Med.,
159, 417-435]:

(4-3) cDNA Cloning
[0288] cDNA encoding the heavy and light chains of the mouse anti-human Fas monoclonal antibody
HFE7A was cloned by a combination of reverse transcription and PCR ("RT-PCR"). Amplification
was performed on the poly(A)
+ RNA fraction obtained from HFE7A-producing hybridoma cells as described in (4-1)
above. The RT-PCR reaction was performed using RNA PCR Kit (AMV) Version 2 (Takara
Shuzo Co., Ltd.).
a) The reverse transcriptase reaction
[0289] The oligonucleotide primer sets (5'-terminal and 3'-terminal primers), synthesised
in (4-2) above, were used as primer pairs for the RT-PCR reaction for the heavy and
light chains.
Composition of the reaction solution: |
poly(A)+ RNA (heavy or light chain, as required), 1 µg; |
3'-primer (H2 or L2), 0.3 µg; |
Tris-HCl (pH 8.3), 10 mM; |
potassium chloride, 50 mM; |
dNTP's, 1 mM; |
magnesium chloride, 5 mM; |
RNase inhibitor (provided with the kit), 0.5 unit; |
reverse transcriptase (provided with the kit), 0.25 unit; and |
redistilled water to a total volume of 20 µl. |
[0290] The reaction solution was incubated at 55°C for 30 minutes, 99°C for 5 minutes and
then 5°C for 5 minutes. The thus treated RT solution was then used in the following
PCR stage.
b) PCR
[0291]
Composition of the PCR reaction solution: |
reverse transcriptase reaction solution, 20 µl; |
10-fold concentrated RNA PCR buffer (provided with the kit), 10 µl; |
magnesium chloride solution (provided with the kit), 10 µl; |
Tag polymerase (provided with the kit), 2.5 units; |
|
5'-primer (Hl or L1), final concentration 0.2 µM; and sterile deionised water to a
total volume of 100 µl. |
[0292] The PCR reaction solution was heated at 94°C for 2 minutes, then followed by a cycle
of 94°C for 30 seconds, 60°C for 30 seconds and 72°C for 1.5 minutes, repeated 28
times.
[0293] After the PCR reaction, aliquots of the reaction solutions were electrophoresed on
1.5% w/v agarose gels. Bands of about 1.4 kbp and about 0.7 kbp were found to have
been amplified in the reaction solutions, using the primers for the heavy chain and
those for the light chain, respectively. This confirmed that cDNA's encoding heavy
and light chains had been amplified, as intended. Accordingly, the amplified PCR reaction
solutions could be used in the next step of cloning the amplified cDNA's using the
TA Cloning kit (Invitrogen). This was performed as follows.
[0294] The relevant PCR reaction solution, together with 50 ng of pCRII vector (provided
with the TA Cloning kit), was mixed in 1 µl of 10× ligase reaction buffer [6 mM Tris-HCl
(pH 7.5), 6 mM magnesium chloride , 5 mM sodium chloride, 7 mM β-mercaptoethanol,
0.1 mM ATP, 2 mM DTT, 1 mM spermidine, and 0.1 mg/ml bovine serum albumin], to which
4 units of T4 DNA ligase (1 µl) had been added. The total volume of the mixture was
adjusted to 10 µl with sterile deionised water, and the resulting ligase solution
was incubated at 14°C for 15 hours.
[0295] After this time, 2 µl of the ligase reaction solution was added to 50 µl of competent
E. coli strain TOP10F' (provided with the TA Cloning kit and brought to competence in accordance
with the kit's instruction manual) to which 2 µl of 0.5 M β-mercaptoethanol had been
added, and the resulting mixture was kept on ice for 30 minutes, then at 42°C for
30 seconds, and again on ice for 5 minutes. Next, 500 µl of SOC medium (2% v/v tryptone,
0.5% w/v yeast extract, 0.05% w/v sodium chloride, 2.5 mM potassium chloride, 1 mM
magnesium chloride, and 20 mM glucose) was added to the culture, and the mixture was
incubated for 1 hour at 37°C with shaking.
[0296] After this time, the culture was spread on an L-broth agar plate [1% v/v tryptone,
0.5% w/v yeast extract, 0.5% w/v sodium chloride, 0.1% w/v glucose, and 0.6% w/v bacto-agar
(Difco)], containing 100 µg/ml ampicillin, and incubated at 37°C, overnight. Single
ampicillin resistant colonies appearing on the plate were selected and scraped off
with a platinum transfer loop, and cultured in L-broth medium containing 100 µg/ml
ampicillin at 37°C, overnight, with shaking at 200 r.p.m. After incubation, the cells
were harvested by centrifugation, from which plasmid DNA was prepared by the alkali
method. The thus obtained plasmids were designated as plasmid pCR-H (the plasmid carrying
cDNA encoding the heavy chain of HFE7A) or pCR-L (the plasmid carrying cDNA encoding
the light chain of HFE7A).
(4-4) Nucleotide sequence analysis
[0297] The nucleotide sequences of both of the cDNA's encoding the heavy chain of HFE7A
(1.4 kbp) and the light chain of HFE7A (0.7 kbp) carried by the plasmids pCR-H and
pCR-L, obtained in (4-3) above, were determined by the dideoxy method [
c.f. Sanger, F. S., et
al., (1977), Proc. Natl. Acad. Sci. USA,
74:5463-5467] using a gene sequence analyzer (Model 310 Genetic Analyzer; Perkin Elmer,
Japan).
[0298] The cDNA nucleotide sequences of the heavy and light chains of HFE7A, thus determined,
are given as SEQ ID Nos. 8 and 10, respectively, in the Sequence Listing. The concomitant,
complete amino acid sequences of the heavy and light chains of HFE7A, as coded by
the cDNA's, are given as SEQ ID Nos. 9 and 11, respectively, of the Sequence Listing.
The N-terminal amino acid sequence of HFE7A heavy chain established in (4-1) above
(SEQ ID No. 16 of the Sequence Listing) matched perfectly with the sequence of amino
acid Nos. 1 to 11 of SEQ ID No. 9, except for the one uncertain residue. The N-terminal
amino acid sequence of the HFE7A light chain (SEQ ID No. 17 of the Sequence Listing)
matched exactly the sequence of amino acid Nos. 1 to 22 of SEQ ID No. 11. Thus, the
N-termini of the mature heavy and light chain proteins of HFE7A were demonstrated
to be amino acids Nos. 1 to 11 and Nos. 1 to 22 in SEQ ID Nos. 9 and 11, respectively.
[0299] Furthermore, when the amino acid sequences of the heavy and light chains were compared
with the database of amino acid sequences of antibodies [Kabat E. A.,
et al., (1991), in "Sequences of Proteins of Immunological Interest Vol.II," U.S. Department
of Health and Human Services], it was established that, for the heavy chain, amino
acid Nos. 1 to 121 of SEQ ID NO. 9 constituted the variable region, while amino acid
Nos. 122 to 445 constituted the constant region. For the light chain, amino acid Nos.
1 to 111 of SEQ ID NO. 11 constituted the variable region, while amino acid Nos. 112
to 218 constituted the constant region.
[0300] The locations and sequences of the CDR's in the amino acid sequences of the variable
regions of the heavy and light chains of HFE7A, as determined above, were also elucidated
by comparing the homologies with the same database of amino acid sequences of antibodies
[
c.f. Kabat E. A.,
et al., (1991), ibid.]. From this publication, it can be established the lengths of the framework
regions in the variable regions are substantially the same, and that the amino acid
sequences share common characteristics, among different antibodies of the same subtype.
CDR's are unique sequences located between the framework regions. Therefore, by comparing
the amino acid sequences of the heavy and light chains of HFE7A with those of the
same subtypes in Kabat's work, it was possible to identify the CDR's of HFE7A.
[0301] Accordingly, it was established that, in the heavy chain of HFE7A (SEQ ID No. 9 in
the Sequence Listing), amino acid Nos. 31 to 35 form CDRH
1, amino acid Nos. 50 to 66 form CDRH
2 and amino acid Nos. 99 to 110 form CDRH
3. The CDR's in the light chain of HFE7A (SEQ ID No. 11 in the Sequence Listing) were
identified as amino acid Nos. 24 to 38 (CDRL
1), amino acid Nos. 54 to 60 (CDRL
2), and amino acid Nos. 93 to 101 (CDRL
3).
REFERENCE EXAMPLE 5
Preparation of recombinant antibody
(5-1) Construction of expression plasmid
[0302] Recombinant expression vectors for animal cells were constructed by inserting the
cDNA's encoding the heavy and light chains of HFE7A (cloned in Reference Example 4)
into the expression vector pMS18S [
c.f. Hara, T.,
et al., (1992), EMBO J.,
11, 1875]. This was performed as follows.
[0303] First, oligonucleotide primers:

were synthesised. These primers serve for the introduction of a recognition site
for the restriction enzyme EcoRI, for a recognition site for the restriction enzyme
XbaI, as well as a termination codon, at the 5'-end and at the 3'-end, respectively,
of the heavy chain cDNA carried by plasmid pCR-H.
[0304] Oligonucleotide primers:

were also synthesised. These primers serve for the introduction of a recognition
site for the restriction enzyme EcoRI, for a recognition site for the restriction
enzyme NotI, as well as for a termination codon, at the 5'-end and at the 3'-end,
respectively, of the light chain cDNA carried by plasmid pCR-L.
[0305] Using these respective primers for the heavy and light chains, PCR was performed
as follows.
Composition of the reaction solution: |
template (pCR-H or pCR-L), 1 µg; |
5'-primer (H3 or L3), 40 pmol; |
3'-primer (H4 or L4), 40 pmol; |
Tris-HCl (pH 8.0), 20 mM; |
potassium chloride, 10 mM; |
ammonium sulphate, 6 mM; |
magnesium chloride, 2 mM; |
Triton X-100, 0.1%; |
bovine serum albumin, nuclease-free, 10 µg/ml; |
dNTP's, 0.25 mM; |
native Pfu DNA polymerase (Stratagene), 5 units; and |
sterile distilled water to a total volume of 100 µl. |
PCR thermal conditions:
[0306] Initial heating of the reaction solution was at 94°C for 2 minutes, after which a
thermal cycle of 94°C for 30 seconds, 60°C for 30 seconds and 75°C for 1.5 minutes
was repeated 28 times.
[0307] The resulting amplified DNA was digested with the restriction enzymes EcoRI and XbaI
(for the heavy chain) or EcoRI and NotI (for the light chain), and then mixed with
the animal cell expression plasmid pME18S [
c.f. Hara. T.,
et al., (1992), EMBO J.,
11, 1875] which had either been digested with the restriction enzymes EcoRI and XbaI
(for the heavy chain) or EcoRI and NotI (for the light chain) and dephosphorylated
using CIP [as described in Example 2 (2) 3) c) below]. One microlitre of 4 units of
T4 DNA ligase were added to 8 µl of the resulting mixture, and 1 µl of 10× ligase
reaction buffer [6 mM Tris-HCl (pH 7.5), 6 mM magnesium chloride, 5 mM sodium chloride,
7 mM β-mercaptoethanol, 0.1 mM ATP, 2 mM DTT, 1 mM spermidine, and 0.1 mg/ml bovine
serum albumin] was then also added to the mixture, which was then incubated at 14°C
for 15 hours.
[0308] After this time, 2 µl of the incubated ligase reaction solution was mixed with 50
µl of competent
E. coli strain JM109 at a cell density of 1-2 x 10
9 cells/ml (Takara Shuzo Co., Ltd.), and the mixture was kept on ice for 30 minutes,
then at 42°C for 30 seconds, and again on ice for 5 minutes. Then, 500 µl of SOC medium
(2% v/v tryptone, 0.5% w/v yeast extract, 0.05% w/v sodium chloride, 2.5 mM w/v potassium
chloride, 1 mM magnesium chloride, and 20 mM glucose) was added to the mixture, which
was incubated for a further hour, with shaking. Transformant strains were then isolated,
and plasmid DNA was prepared from the strains, following the methods described in
Reference Example 4 (4-3).
[0309] The resulting plasmids were designated pME-H (the expression plasmid vector carrying
cDNA encoding the heavy chain of HFE7A) and pME-L (the expression plasmid vector carrying
cDNA encoding the light chain of HFE7A). The transformant
E. coli strains harboring these plasmids, designated as
E. coli pME-H and
E. coli pME-L, were deposited with Kogyo Gijutsuin Seimei-kogaku Gijutsu Kenkyujo on March
12, 1997, in accordance with the Budapest Treaty for the Deposit of Microorganisms,
and were accorded the accession numbers FERM BP-5868 and FERM BP-5867, respectively.
(5-2) Expression in COS-7 cells
[0310] Transfection of COS-7 cells with the expression plasmids pME-H and pME-L obtained
in (5-1) above was performed by electroporation using a gene transfection apparatus
(ECM600; BTX).
[0311] COS-7 cells (American Type Culture Collection No. CRL-1651) were grown up to semi-confluence
in a culture flask (culture area: 225 cm
2; Sumitomo Bakelite, K. K.) containing DMEM supplemented with 10% v/v FCS. Subsequently,
the medium was discarded and 3 ml of trypsin-EDTA solution (Sigma Chemicals Co.) were
added to the cells, followed by incubation at 37°C for 3 minutes. The cells detached
by this process were harvested, washed twice with PBS and then adjusted to a cell
density of 5 x 10
6 cells/ml with PBS.
[0312] Meanwhile, 20 µg each of plasmids pME-H and pME-L, prepared using a large-scale plasmid
preparation kit (MaxiPrep DNA Purification System; Promega), were separately precipitated
with ethanol and dissolved in 20 µl each of sterile PBS. Where COS-7 cells were cotransfected
with both plasmids, 20 µg of each of the plasmids were used and dissolved together
in 20 µl of sterile PBS.
[0313] Twenty µl of the cell suspension prepared above (1.2 x 10
6 cells) and 20 µl of the relevant plasmid solution were mixed and transferred to a
chamber with electrodes set at a distance apart of 2 mm (BTX). The chamber was then
loaded in the gene transfection apparatus and given a single pulse of 10 msec at 150
V to provide a total charge of 900 µF. The cell-DNA mixture in the chamber was added
to 40 ml of DMEM supplemented with 10% v/v FCS and incubated in plastic cell culture
dishes under 5% v/v CO
2 at 37°C for 24 hours. After this time, the culture supernatant was discarded and
the cells were washed with serum-free DMEM medium. After that, 40 ml of serum-free
DMEM was added to each of the plastic dishes and the supernatant recovered after the
cells had been cultured under 5% v/v CO
2 at 37°C for a further 72 hours.
[0314] Using the above method, COS-7 cells were obtained which were transfected with either
or both plasmids (as shown below), and the supernatant of each of the transformants
was recovered:
(A): pME-H only;
(B): pME-L only; and
(C): cotransfection of pME-H and pME-L.
(5-3) Detection of anti-Fas antibody in transformant culture supernatant
[0315] Expression of anti-Fas antibody in the culture supernatants obtained in (5-2) above
was determined by ELISA, in a manner similar to that described in Reference Example
3, and using the human Fas fusion protein as the antigen. It was established that
the production of an antibody reacting with the human Fas antigen fusion protein in
the culture supernatant only happened when pME-H and pME-L were both used to cotransfect
COS-7 cells [5-2 (C)].
REFERENCE EXAMPLE 6
Epitope Determination
(6-1) ELISA
[0316] The following peptides were synthesised by Fmoc solid phase synthesis (
c.f. Carpino, L. A. and Han, G. Y., (1970), J. Am. Chem. Soc.,
92, 5748-5749) using an automated peptide synthesiser (Model 430A; Perkin Elmer, Japan,
Applied Biosystems Division):

[0317] P1 to P15 are partial sequences of the amino acid sequence of Nos. 1 to 157 of the
extracellular domain of human Fas, with between 9 and 11 amino acid residues overlapping
one another. P16 is a negative control having no homology with human Fas.
[0318] P1 to P16 were respectively dissolved completely in 48 µl dimethyl sulphoxide (DMSO)
and each was then adjusted to adjusted to a final volume of 0.8 ml by the addition
of 752 µl PBS containing 1 mM β-mercaptoethanol.
[0319] The above peptides each correspond to a portion of the extracellular domain of the
human Fas molecule, but with a carboxyl group added to the C-terminus. Each peptide
was diluted to 50 µg/ml with 0.05 M carbonate-bicarbonate buffer (pH 9.6), containing
10 mM 2-mercaptoethanol, and 50 µl of each were introduced into a well of a 96-well
ELISA microplate (Nunc). The plate was kept standing at 4°C overnight to allow adsorption
of the peptide to the well surface.
[0320] After this time, the solution in the wells was discarded and each well was washed
4 times with PBS-Tween. Then, 100 µl of PBS containing 1%(w/v) bovine serum albumin
(A3803; Sigma Chemicals Co.) was added to each well and the plate was incubated at
37°C for 1 hour. The wells were then washed a further 4 times with PBS-Tween, and
then 50 µl of HFE7A or CH11 adjusted to 5 µg/ml in PBS was added to each well. The
plate was then incubated at 37°C for 1 hour, and the wells were again washed 4 times
with PBS-Tween. After washing, 50 µl of horse radish peroxidase labeled goat anti-mouse
immunoglobulin antibody (Amersham), diluted 1000-fold with PBS, was added per well,
and the plate was again incubated at 37°C for 1 hour, after which the wells were washed
4 times with PBS-Tween. Horse radish peroxidase substrate (BioRad) was then added
in an amount of 100 µl/well and the plate was allowed to stand at room temperature
for 15 minutes before reading the absorbance of each well at 415 nm using a microplate
reader (Corona). As a positive control, the human Fas fusion protein prepared in Reference
Example 1 was used in place of the synthetic peptides.
[0321] Using the above methodology, it was established that only the wells with adsorbed
P11 showed high absorbance values, demonstrating that HFE7A specifically binds an
amino acid sequence contained in P11 (Figure 3).
(6-2) Identification of the epitope recognised by HFE7A in P11 by competitive assay
[0322] The following peptides were synthesised:

[0323] P95, P100, P105 and P110 are each 10-residue partial sequences of the flanking region
(corresponding to amino acids 95 to 128 of the extracellular domain of human Fas)
of the amino acid sequence corresponding to P11 in the extracellular domain of human
Fas, each having 5 overlapping amino acid residues with the next.
[0324] Intended Peptide P115, Pro-Asn-Phe-Phe-Cys-Asn-Ser-Thr-Val-Cys (P115: amino acid
Nos. 1 to 10 of SEQ ID No. 45 of the Sequence Listing) has a 5-residue overlap with
a 10-residue peptide P110, but was expected to have poor solubility, so 4 extra residues
were added at the C-terminus of P115 to produce P115L.
[0325] D355-364 was used as a negative control, this peptide having no homology with human
Fas.
[0326] Each peptide, except P115L, was dissolved completely in 16 µl DMSO each was then
adjusted to a final volume of 0.8 ml by the addition of 784 µl PBS containing 1 mM
2-mercaptoethanol. P115L was dissolved completely in 48 µl DMSO and was then adjusted
to a final volume of 0.8 ml by the addition of PBS containing 1 mM 2-mercaptoethanol.
[0327] Each of the above peptide solutions (corresponding to 200 µg peptide) were mixed
with 0.25 µg of HFE7A in a microtube and adjusted to a total volume of 100 µl with
PBS containing 1 mM 2-mercaptoethanol. The mixture was incubated at 37°C for 2 hours
with stirring at 10 to 20 r.p.m., followed by the addition of FCS to a final concentration
of 5%, thereby to yield the peptide-antibody mixture.
[0328] WR19L12a cells were grown up by a method similar to that described in Reference Example
2. The cells were then recovered by centrifugation and adjusted to a cell density
of 1 x 10
7 cells/ml with serum-free RPMI medium. The cell suspension was dispensed into a 96-well
plate, with the wells having U-shaped bottoms, at 100 µl/well and centrifuged at 4°C,
1,000 r.p.m. for 3 minutes using a swing rotor for the microplates, and the supernatant
was then discarded. Next, 100 µl of peptide-antibody mixture was added to each pellet
and mixed by pipetting a few times, as described above. The plate was then allowed
to stand at 4°C for 30 minutes, and was then centrifuged and the supernatant discarded.
The pellet was washed 3 times with flow cytometry buffer, and then 50 µl FITC-labeled
goat anti-mouse IgG antibody (Kappel), diluted 250-fold with flow cytometry buffer,
was added per well, followed by light pipetting to mix the well contents.
[0329] The plate was kept in the dark at 4°C for 30 minutes, then centrifuged and the supernatant
discarded. The pellet was washed 3 times with flow cytometry buffer, which contained
10% v/v neutral buffered formaldehyde solution (Wako Pure Chemical Industries, Ltd.)
for tissue fixation, this solution being 10-fold diluted with PBS and 50 µl/well was
added and mixed with light pipetting. Next, the plate was kept in the dark at 4°C
for at least 12 hours to fix the cells.
[0330] After this time, the cells were suspended in 100 µl/well of flow cytometry buffer
and centrifuged, in order to remove the supernatant. The pellet was washed 3 times
with flow cytometry buffer and suspended in 500 µl/well of flow cytometry buffer,
and the resulting suspension was analyzed with a flow cytometer (Cytoace-150; Nippon
Bunko, K. K. - excitation wave length: 488 nm; detection wave length: 530 nm) to calculate
average intensities of FITC fluorescence per cell. Average intensities of FITC fluorescence
for each sample were calculated by taking the value with no peptide-antibody mixture
as 0% and the value of the sample containing D355-364 as 100%.
[0331] By the above procedure, it was established that P105 is able to strongly inhibit
binding between HFE7A and WR19L12a cells, and that P100 and P110, the amino acid sequence
of each of which overlaps 50% with P105, each inhibit binding between HFE7A and WR19L12a
cells by about 50% and 60%, respectively. No inhibition was observed with either of
P95 and P115L, which also have no overlapping segments shared with P105 (Figure 4).
From these results, it was established that P105 represents an amino acid sequence
capable of inhibiting binding between HFE7A and human Fas and that, consequently,
the epitope for HFE7A must be located within the amino acid sequence reproduced in
P105. This epitopic amino acid sequence is a region which is conserved between human
Fas and mouse Fas.
REFERENCE EXAMPLE 7
Binding of HFE7A to Simian Fas
[0332] The following test was performed, in order to establish whether HFE7A was able to
bind Fas antigen from various primate species.
[0333] First, peripheral blood samples were taken from a chimpanzee (Sanwa Kagaku Kenkyujo
Kumamoto Primates Park, 40 ml), 20 ml from either a Japanese monkey
(Macaca fuscata) or from a crab-eating monkey
(Macaca irus) and 3 ml from a marmoset (of the genus
Hapalidae). The blood samples had 1 ml of heparin (Novoheparin; Novo) added to them and the samples
were then slowly layered over an equal volume of Ficol Paque solution [(Pharmacia)
specific gravity: 1.077 for all except the crab-eating monkey, which had a specific
gravity of 1.072] and centrifuged at 1,700 r.p.m. for 30 minutes in order to obtain
a fraction of peripheral blood mononuclear cells. This mononuclear cell fraction was
washed twice with Hanks' balanced salt solution and then suspended in RPMI 1640 medium
with 10% v/v FCS to a cell density of 1 x 10
6 cells/ml. Phytohaemagglutinin-P (Sigma Chemicals, Co.) was added to the resulting
suspension to a final concentration of 5 µg/ml and the sample incubated at 37°C under
5% v/v CO
2 for 24 hours. After this time, the cells were recovered by centrifugation, washed
and resuspended in RPMI 1640 medium containing 10% v/v FCS. Then, to activate the
recovered cells, interleukin-2 (Amersham) was added to the suspension to a final concentration
of 10 units/ml, and this was incubated at 37°C under 5% v/v CO
2 for 72 hours.
[0334] An amount of the activated preparation calculated to contain 1 x 10
6 activated lymphocyte cells was placed in a test tube and either suspended in 50 µl
of 20 µg/ml HFE7A in PBS or 50 µl of PBS alone. The resulting suspension was allowed
to stand on ice for 1 hour, after which the cells were washed 3 times with aliquots
of 500 µl of PBS and then suspended in 50 µl of 20 µg/ml FITC-labeled anti-mouse IgG
antibody (Bioresource) in PBS. This suspension was then placed on ice for 30 minutes,
and washed 3 times with aliquots of 500 µl of PBS. Using the cells suspended in 500
µl of PBS as controls, the fluorescence intensities were measured, using a flow cytometer
(Cytoace; Nippon Bunko, K. K.).
[0335] Distributions of cell numbers by fluorescence intensity were obtained and the proportions
of the numbers of the stained cells to those of total cells were calculated. As a
result, in the samples without HFE7A, the stained cells constituted less than 3% for
all species. However, in the samples treated with HFE7A, at least 17% of the cells
were stained, the maximum being 82%. Accordingly, HFE7A is capable of binding a wide
range of primate Fas including humans against which HFE7A was originally prepared.
REFERENCE EXAMPLE 8
Apoptosis-inducing Activity of HFE7A on Murine T cells in vivo
[0336] Either 500 µl of PBS, alone, or 0.05 or 0.1 mg of HFE7A monoclonal antibody (in 500
µl of PBS) was administered intraperitoneally to the members of groups of three 6-week
old female C3H/HeJ mice (from Japan Clea). The mice were anesthetised with ether,
42 hours post administration, and their thymuses removed. These thymuses were washed
with RPMI medium containing 10% v/v FCS, and subsequently disrupted, using a spatula
on a mesh (Cell Strainer; Falcon). The disrupted cells (which had passed through the
mesh) were washed twice with RPMI 1640 medium containing 10% v/v FCS.
[0337] Where washing more than once is referred to in any of the Examples herein, it will
be understood that the medium with which the washing is performed is replaced with
fresh such medium for each wash, unless otherwise required.
[0338] The washed cells obtained above were counted and adjusted to 1 x 10
6 cells in 50 µl of RPMI 1640 medium containing 10% v/v FCS. Each of the resulting
suspensions was dispensed into a well of a 96-well microplate, the wells having U-shaped
bottoms (Nunc) and the plate was then centrifuged (90 x g, 4°C, 10 minutes).
[0339] The supernatants were discarded and then one of the following two fluorescence-labeled
antibody solutions in PBS, (a) or (b), was added to each well:
(a) 10 µl of 0.5 mg/ml of FITC-labeled anti-mouse CD95 (Fas) antibody (Jo2; PharMingen),
and 10 µl of 0.5 mg/ml of phycoerythrin (PE) labeled anti-mouse CD90 antibody (Thy-1.2;
Cedarlane; CD90 being a cell surface antigen expressed only on T cells);
(b) 10 µl of 0.5 mg/ml of FITC-labeled anti-mouse CD4 antibody (L3T4; PharMingen),
and 10 µl of 0.2 mg/ml of PE-labeled anti-mouse CD8 antibody (Ly-2; PharMingen).
[0340] After addition of the antibody mixtures, the plate was shaken to mix the contents
of the wells and then kept on ice for 1 hour before centrifuging (90 x g, 4°C, 10
minutes). After discarding the supernatant and washing the wells twice with 100 µl/well
of flow cytometry buffer, cells were fixed by adding 50 µl/well of 3.7% v/v formaldehyde
solution and were then stood on ice for 10 minutes. After further centrifugation (90
x g, 4°C, 10 minutes) to remove the supernatant, the cell pellets were again washed
with 100 µl/well of flow cytometry buffer and suspended in 100 µl/well of flow cytometry
buffer. Using the thus obtained cell suspensions from each well as samples, the fluorescence
of samples of 1 x 10
4 cells was measured, using a flow cytometer (Epics Elite; Coulter) under the following
conditions:
excitation wave length: 488 nm;
detection wave length: 530 nm (FITC) or 600 nm (PE).
[0341] Fluorescence distributions of FITC and PE for the cell populations of each sample
could then be prepared. For the samples to which antibody mixture (a) was added, the
proportion of the number of cells that were positive for Fas and CD90 (hereinafter
referred to as "Fas
+CD90
+") relative to the total cell number was calculated. Similarly, for the samples to
which antibody mixture (b) was added, the proportion of the number of cells that were
positive for CD4 and CD8 (hereinafter referred to as "CD4
+CDB
+") or those that were positive for CD4 but negative for CD8 (hereinafter referred
to as "CD4
+CD8
-") relative to the total cell number was calculated.
[0342] The results are shown as percentages in Table 1, below.
Table 1
Cell |
Fas+ CD90+ |
CD4+ CD8+ |
CD4+ CD8- |
PBS only |
76.2 |
62.6 |
11.7 |
HFE7A 0.05 mg |
2.3 |
1.9 |
1.2 |
HFE7A 0.1 mg |
1.7 |
2.8 |
0.7 |
[0343] Compared with the group to which PBS only was administered, the proportions of T
cells expressing Fas (Fas
+CD90
+) in the thymus cells of mice from the groups to which HFE7A was administered were
remarkably reduced at both doses. Further, the CD4
+CD8
+ and CD4
+CD8
- cell populations, known for substantial Fas expression, were also markedly reduced
in number after HFE7A administration, compared with the PBS only group.
[0344] Accordingly, it was deduced that the anti-Fas monoclonal antibody HFE7A had apoptosis-inducing
activity,
in vivo, on Fas-expressing T cells.
REFERENCE EXAMPLE 9
Effects of HFE7A on an Autoimmune Disease Model
[0345] The effects of administration of anti-Fas monoclonal antibody HFE7A on autoimmune
disease symptoms were examined using MRL gld/gld mice. These mice carry a mutant of
the Fas ligand gene and serve as an animal model of systemic lupus erythaematosus-like
autoimmune diseases.
[0346] 18-week old MRL gld/gld mice (from Japan SLC, K. K.), were treated intraperitoneally
with a single dose of either 0.2 or 0.5 mg of HFE7A monoclonal antibody prepared in
Reference Example 3 (in 500 µl of PBS) or with 500 µl of PBS alone.
[0347] Each test mouse was monitored for swelling of the ankles as a symptom of autoimmune
disease. The degree of swelling was evaluated and recorded over time for each group
[
c.f. Shin Yonehara, (1994), Nikkei Science Bessatsu,
110, 66-77]. The degree of swelling of the ankles was observed to markedly decrease with
administration of HFE7A.
[0348] The thymuses were removed from the test mice and the proportions of T cells which
expressed Fas in the thymuses were determined by the method described in Reference
Example 8 above. The results showed that the number of Fas-expressing T cells in the
thymuses were significantly reduced after the administration of HFE7A, in accordance
with the results of Reference Example 8.
REFERENCE EXAMPLE 10
Hepatotoxicity Testing
[0349] BALB/c mice were intraperitoneally administered a single dose of one of the following:
i) 0.2 mg HFE7A in 500 µl of PBS;
ii) 0.5 mg HFE7A in 500 µl of PBS;
iii) 0.1 mg Jo2 (PharMingen) in 500 µl of PBS; and
iv) 500 µl of PBS alone.
[0350] Of the above, Jo2 is a known anti-mouse Fas antibody which has apoptosis-inducing
activity. Blood was taken from the posterior aorta of the mice at 8 hours, 24 hours
or 72 hours post administration. Blood was taken at 3 hours post administration for
the Jo2-treated mice, while they were still alive. All blood was taken under light
ether anesthetization. The blood levels of glutamic-oxaloacetic transaminase (GOT)
and glutamic-pyruvic transaminase (GPT) were measured for each blood sample, using
an automated analyzer (Model 7250; Hitachi Seisakusyo, K. K.) together with the appropriate
reagent for the analyzer (Transaminase-HRII; Wako Pure Chemical Industries, Ltd.).
As a result, the Jo2-treated group showed rapid elevation of GOT and GPT values after
3 hours, whereas the corresponding values for the groups treated with HFE7A showed
little change, as with the group treated with PBS only (Figure 5). From these results,
it was could be established that HFE7A did not induce acute hepatic disorders.
REFERENCE EXAMPLE 11
Effects on Fulminant Hepatitis Model
[0351] It is known that, upon intraperitoneal administration of the anti-mouse Fas antibody
Jo2, a mouse develops fulminant hepatitis and dies within several hours [
c.f. Ogasawara, J.,
et al., (1993), Nature,
364, 806]. Accordingly, in order to evaluate the effects of HFE7A on hepatic disorders
induced by Jo2, the viability of mice was tested by administering HFE7A simultaneously
with, or subsequently to, Jo2 administration.
[0352] Female, 6 week old BALB/c mice (three mice per group; from Japan SLC) received intraperitoneal
administration of an antibody preparation as follows:
(A) 0.1 mg of Jo2 in 0.5 ml PBS;
(B) 0.01 mg of Jo2 in 0.5 ml PBS;
(C) 0.1 mg of Jo2 and 0.5 mg of HFE7A together in 0.5 ml PBS (simultaneous administration);
(D) 0.1 mg of Jo2 and 0.05 mg of HFE7A in 0.5 ml PBS (simultaneous administration);
and
(E) 0.01 mg of Jo2 in 0.2 ml PBS, followed by 0.1 mg of HFE7A in 0.2 ml PBS after
20 minutes;
and the mice were then observed over time. The results are shown in Figure 6.
[0353] When Jo2 alone was administered, all mice died within 9 hours, regardless of whether
they were administered with 0.1 mg or with 0.01 mg Jo2 /mouse, i.e., mice of groups
(A) and (B) above all died within 9 hours of administration. In contrast, when HFE7A
was administered simultaneously with Jo2 (both 0.5 mg/mouse and 0.05 mg/mouse), i.e.,
groups (C) and (D) above, the mice showed no disorders even for several weeks post
administration, demonstrating that HFE7A administration can block the development
of fulminant hepatitis. Moreover, mice remained normal, with no apparent symptoms
developing, even when HFE7A was administered 20 minutes after Jo2 administration.
[0354] Thus, HFE7A has preventive and therapeutic effects on various diseases involving
disorders of normal tissues which are mediated by the Fas/Fas ligand system, both
in the liver and in other organs.
REFERENCE EXAMPLE 12
Effects on Rheumatoid Arthritis
1) Preventive effect on the development of collagen-induced arthritis
[0355] F1 mice obtained from the mating of a female BALB/c mouse and a male DBA/1J mouse
(CD1F1 mice, 6 weeks old, female, from Japan Charles River, K. K.) were tamed for
1 week. After this time, the mice were treated with collagen to induce arthritis.
[0356] In more detail, the method was based on one described in the literature [
c.f. Phadke, K., (1985), Immunopharmacol.,
10, 51-60]. In this method, a 0.3% w/v solution of bovine collagen type II (Collagen
Gijutsu Kensyukai, supplied in a 50 mM acetic acid solution) was diluted to 0.2% (2
mg/ml) with further 50 mM acetic acid and then emulsified with an equal volume of
Freund's complete adjuvant (Difco). This emulsion was then administered, in an amount
of 100 µl (corresponding to 100 µg bovine collagen type II), intradermally in the
proximal portion of the tail, which was held in a fixing device for intravenous injection,
using a 1 ml plastic syringe equipped with a tuberculin needle. An identical booster
dose was administered under similar conditions, 1 week after the initial challenge.
[0357] At the same time as the booster injection, an injection of 100 µg of either HFE7A
or control mouse IgG in 0.5 ml PBS was administered intraperitoneally (6 mice per
group). Starting five weeks after the initial challenge, swelling of the limbs was
monitored visually. The degree of swelling of the joints of the limbs was scored based
on the method of Wood, F. D.,
et al. [Int. Arch. Allergy Appl. Immunol., (1969),
35, 456-467]. Accordingly, the following criteria were used in the calculation of the
scores for each of the limbs:
Score |
|
0: |
no symptom; |
1: |
swelling and reddening of only one of the small joints, e.g., of a toe; |
2: |
swelling and reddening of 2 or more small joints, or of one relatively large joint,
such as an ankle; and |
3: |
swelling and reddening of a limb in its entirety. |
[0358] Accordingly, the maximum score for one animal is when all 4 limbs swell, and is 12.
An animal scoring at least 1 for all four limbs was designated as an "affected mouse."
The results are shown in Figure 7.
[0359] In the control group to which non-specific mouse IgG was given, all mice were affected
by the 7th week after the initial challenge, whereas in the group to which HFE7A was
administered, a half of the mice showed no reddening of any joints at all up to the
8th week (Figure 7A). In addition, the HFE7A-treated group had a lower average score
compared with the control group (Figure 7B).
2) Apoptosis-induction in synovial cells from rheumatic patients
[0360] The effects of HFE7A on the viability of synovial cells from patients with rheumatoid
arthritis were evaluated. The method was as described below, using the reducing power
of the mitochondria as the index.
[0361] Synovial tissue obtained from an affected region of a patient with rheumatoid arthritis
was cut into small pieces, with scissors, in Dulbecco's modified Eagle medium (Gibco)
supplemented with 10% v/v FCS (Summit). The fat was removed and collagenase (Sigma
Chemical Co.) was then added to a final concentration of 5 µg/ml and the mixture was
incubated at 37°C for 90 minutes under 5% v/v CO
2. The resulting incubated cells then served as the synovial cells for the remainder
of the Experiment.
[0362] The thus obtained synovial cells were separated into single cells by treatment with
a 0.05% w/v aqueous trypsin solution at 37°C for 2 minutes, then suspended in Dulbecco's
modified Eagle medium containing 10% v/v FCS to a cell density of 1 x 10
5/ml. This cell suspension was then dispensed into wells of a 96-well plate at 2 x
10
4 cells /200 µl per well, and incubated at 37°C under 5% v/v CO
2 for 6 days. The culture supernatant was discarded and the cells were washed 3 times
with Hank's buffer (Gibco). After washing, 200 µl of Dulbecco's modified Eagle medium
containing 10% v/v FCS and between 10 and 1,000 ng/ml of HFE7A (serial 10-fold dilutions)
were added to each well and the plate further incubated at 37°C under 5% v/v CO
2 for 20 hours. Next, 50 µl of an aqueous solution of 1 mg/ml XTT (2,3-bis [2-methoxy-4-nitro-5-sulphophenyl]-
2H-tetrazolium-5-carboxanilide inner salt; Sigma Chemical Co.) and 25 µM PMS (phenazine
methosulphate; Sigma Chemical Co.) was added to each well (final concentrations: 250
µg/ml XTT and 5 µM PMS). After a further 4 hours of incubation at 37°C under 5% v/v
CO
2, the absorbance of each well was read at 450 nm.
[0363] The viability of cells in each well was calculated according to the following formula:
Viability (%) = 100 x (a-b) / (c-b),
wherein "a" is the absorbance of a test well, "b" is the absorbance of a well with
no cells, and "c" is the absorbance of a well with no antibody added.
[0364] The results are shown in Table 2. HFE7A inhibited the survival of synovial cells
from patients with rheumatism in a dose-dependent manner.
Table 2
HFE7A concentration (ng/ml) |
average viability (%) |
0 |
100 |
10 |
91 |
100 |
77 |
1000 |
42 |
Example 1
Designing a Humanised Version of the HFE7A Antibody
(1) Molecular modeling of the variable regions of HFE7A
[0365] Molecular modeling of the variable regions of HFE7A was performed by the method generally
known as homology modeling [
c.f. Methods in Enzymology,
203, 121-153, (1991)].
[0366] The primary sequences of variable regions of human immunoglobulin registered in the
Protein Data Bank (hereinafter referred to as the "PDB"; Chemistry Department, Building
555, Brookhaven National Laboratory, P.O. Box 5000, Upton, NY 11973-5000, USA), for
which X-ray crystallography had been performed, were compared with the framework regions
of HFE7A determined above. As a result, 1GGI and 2HFL were selected as having the
highest homologies of the three-dimensional structures of the framework regions for
the light and heavy chains, respectively. Three-dimensional structures of the framework
regions were generated by combining the properties of 1GGI and 2HFL and by calculating
the properties of the regions of HFE7A, as described below, to obtain the "framework
model".
[0367] Using the classification described by Chothia
et al., the CDR's of HFE7A could be classified as follows: CDRL
2, CDRL
3 and CDRH
1 all belong to canonical class 1, while CDRL
1, CDRH
2 and CDRH
3 do not currently appear to belong to any specific canonical class. The CDR loops
of CDRL
2, CDRL
3 and CDRH
1 were ascribed the conformations inherent to their respective canonical classes, and
then integrated into the framework model. CDRL
1 was assigned the conformation of cluster 15B, in accordance with the classification
of Thornton
et al. [
c.f. J. Mol. Biol.,
263, 800-815, (1996)]. For CDRH
2 and CDRH
3, conformations of sequences with high homologies were selected from the PDB and then
these were combined with the results of energy calculations. The conformations of
the CDR loops with the highest probabilities were then taken and integrated into the
framework model.
[0368] Finally, energy calculations were carried out to eliminate undesirable contact between
inappropriate atoms, in terms of energy, in order to obtain an overall molecular model
of HFE7A. The above procedure was performed using the commercially available common
molecular modeling system, AbM (Oxford Molecular Limited, Inc.), although any other
appropriate system could have been used.
[0369] For the molecular model obtained, the accuracy of the structure was further evaluated
using the software, PROCHECK [J. Appl. Cryst., (1993),
26, 283-291], and the degree of surface exposure of each residue was calculated to determine
which surface atoms and groups interacted.
(2) Selection of the acceptors
[0370] The subgroups of the light and heavy chains of HFE7A shared identities of 79% with
the subgroup κIV and also 79% with the subgroup I, respectively, by comparison with
the consensus sequences of the respective subgroups of human antibodies. However,
there was no human antibody having a combination of a κIV light chain and a sub-group
I heavy chain. Thus, 8E10'CL, which has a light chain of subgroup κIII and a heavy
chain of subgroup I, having 72% and 77% sequence identities with the light and heavy
chains of HFE7A, respectively, was selected as the single human antibody which had
light and heavy chains which both had an identity of greater than 70% with the light
and heavy chains of HFE7A.
(3) Selection of donor residues to be grafted onto the acceptors
[0371] Using the software, Cameleon (Oxford Molecular Limited, Inc.), the amino acid sequence
of each of the light and heavy chains of HFE7A was aligned with that of the relevant
chain of 8E10'CL, and humanised sequences of the variable regions were made as described
in the following Examples in accordance with the general guidelines set out in a)
to e) above. Plasmids were constructed which could serve as recombinant vectors comprising
DNA nucleotide sequences encoding humanised anti-human Fas antibodies.
EXAMPLE 2
Preparation of DNA Encoding Humanised Light Chain
(1) Cloning of cDNA encoding a full-length human light chain (κ chain)
[0372] Prior to humanisation of the light chain amino acid sequence of the mouse anti-human
Fas antibody HFE7A, cDNA cloning of a human immunoglobulin light chain comprising
the constant region was first performed.
1) Synthesis of primers
[0373] Separation of cDNA encoding a human light chain was carried out by PCR. For the PCR,
the following two primers were synthesised:

2) Construction of a plasmid containing human immunoglobulin light chain cDNA
[0374] cDNA encoding a full-length human immunoglobulin light chain was prepared by PCR,
inserted into a plasmid and cloned into
E. coli.
[0375] The HL-DNA fragment encoding a full-length human immunoglobulin light chain was prepared
under the following conditions:
Composition of the PCR reaction solution: |
human lymphocyte cDNA library (Life Technologies), 25 ng; |
oligonucleotide primer HVKII5-4, 50 pmol; |
oligonucleotide primer HKCL3-3, 50 pmol; |
25 mM dNTP cocktail, 10 µl; |
100 mM Tris-HCl buffer (pH 8.5), 10 µl; |
1 M potassium chloride [KCl], 5 µl; |
25 mM magnesium chloride [MgCl2], 10 µl; |
Tag DNA polymerase (Perkin Elmer Japan), 1 unit; |
Redistilled water to a total volume of 100 µl. |
[0376] The PCR reaction was conducted as follows. The solution was first heated at 94°C
for 2 minutes, after which a cycle of heating to 94°C for 1 minute, 55°C for 1 minute
and 72°C for 2 minutes, was repeated 30 times. After completion of this procedure,
the reaction solution was heated at 72°C for 10 minutes.
[0377] The thus prepared HL-DNA (human light chain DNA) fragment was inserted into plasmid
pCR3DNA using a eukaryote TA Cloning Kit (Invitrogen), following the manufacturer's
protocol, and introduced into competent E.
coli TOP10F' contained in the kit, and following the instructions in the kit. Plasmid
pHL15-27 carrying the HL-DNA fragment, i.e., cDNA for a human immunoglobulin light
chain, was thereby obtained.
(2) Construction of expression vectors for the light chains of humanised versions of the
HFE7A antibody
1) Construction of expression plasmid vectors for humanised HFE7A light chain
[0378] Humanisation of the amino acid sequence of the light chain of the mouse anti-human
Fas antibody HFE7A entailed replacing the 47th amino acid (proline) and the 49th amino
acid (lysine) from the N-terminus of the amino acid sequence of the light chain (hereinafter
referred to as "region I") with alanine and arginine, respectively. Alanine (47) and
arginine (49) are conserved in the human light chain (κ chain). Further humanisation
was also performed, and entailed replacing the 80th amino acid (histidine), the 81st
amino acid (proline), the 82nd amino acid (valine), the 84th amino acid (glutamic
acid), the 85th amino acid (glutamic acid), the 87th amino acid (alanine) and the
89th amino acid (threonine) (hereinafter referred to as "region II") with serine,
arginine, leucine, proline, alanine, phenylalanine and valine, respectively, as these
are also conserved in the human light chain (κ chain).
[0379] Where both regions I and II were humanised, the sequence was designated as "HH type."
[0380] Where only region I was humanised, the sequence was designated as "HM type."
[0381] Where neither region was humanised, the sequence was designated as "MM type."
[0382] Expression plasmids, respectively carrying these 3 types of humanised light chain
amino acid sequences from the anti-human Fas antibody HFE7A, were constructed as follows.
2) Synthesis of primers for preparing the variable and constant regions of the light
chain of humanised HFE7A
[0383] PCR was used to construct the following DNA sequences, each of which comprised one
of the HH, HM or MM sequences described above, together with the constant region of
the human immunoglobulin light chain (κ chain):
DNA (SEQ ID No. 49 of the Sequence Listing) encoding the HH type polypeptide chain
(SEQ ID No. 50 of the Sequence Listing); DNA (SEQ ID No. 51 of the Sequence Listing)
encoding the HM type polypeptide chain (SEQ ID No. 52 of the Sequence Listing); and
DNA (SEQ ID No. 53 of the Sequence Listing) encoding the MM type polypeptide chain
(SEQ ID No. 54 of the Sequence Listing).
[0384] The following 13 oligonucleotide PCR primers were synthesised:


3) Construction of plasmid p7AL-HH (expression plasmidfor humanised HH type HFE7A light chain)
[0385] The VHH-DNA fragment (SEQ ID No. 49 of the Sequence Listing) encoding the amino acid
sequence of SEQ ID No. 50 of the Sequence Listing was prepared by performing 3-stage
PCR, and then inserted into a plasmid vector and cloned into
E. coli.
a) First stage PCR
[0386] The outline of the first stage PCR for the preparation of VHH-DNA is shown in Figure
8.
[0387] The L7A1-DNA fragment, encoding a secretion signal sequence and a portion of the
FRL
1 region altered to contain a Hind III restriction enzyme cleavage site at the 5'-end,
was prepared as follows.
Composition of the PCR reaction solution: |
plasmid pME-L DNA, 200 ng; |
oligonucleotide primer 7AL1P, 80 pmol; |
oligonucleotide primer 7AL1N, 80 pmol; |
dNTP cocktail, 20 µl; |
10×Pfu buffer, 20 µl; |
Pfu DNA polymerase (Stratagene), 10 units; and |
redistilled water to a final volume of 200 µl. |
[0388] The PCR reaction was conducted as follows. The solution was first heated at 94°C
for 2 minutes, after which a cycle of heating to 94°C for 1 minute, 55°C for 1 minute
and 72°C for 2 minutes, was repeated 30 times. After completion of this procedure,
the reaction solution was heated at 72°C for 10 minutes.
[0389] The L7A2-DNA fragment, encoding a portion of the FRL
1, CDRL
1, FRL
2 and a portion of the CDRL
2 region, was prepared as follows.
Composition of the PCR reaction solution: |
plasmid pME-L DNA, 200 ng; |
oligonucleotide primer 7AL2P, 80 pmol; |
oligonucleotide primer M7AL2N, 80 pmol; |
dNTP cocktail, 20 µl; |
10×Pfu buffer, 20 µl; |
Pfu DNA polymerase, 10 units; and |
redistilled water to a final volume of 200 µl. |
[0390] The PCR reaction was conducted as follows. The solution was first heated at 94°C
for 2 minutes, after which a cycle of heating to 94°C for 1 minute, 55°C for 1 minute
and 72°C for 2 minutes, was repeated 30 times. After completion of this procedure,
the reaction solution was heated at 72°C for 10 minutes.
[0391] The L7A3-DNA fragment, encoding the CDRL
2 and a portion of the FRL
3 was prepared as follows.
Composition of the PCR reaction solution: |
plasmid pME-L DNA, 200 ng; |
oligonucleotide primer 7AL3PA, 80 pmol; |
oligonucleotide primer 7AL3N, 80 pmol; |
dNTP cocktail, 20 µl; |
10×Pfu buffer, 20 µl; |
Pfu DNA polymerase, 10 units; and |
redistilled water to a final volume of 200 µl. |
[0392] The PCR reaction was conducted as follows. The solution was first heated at 94°C
for 2 minutes, after which a cycle of heating to 94°C for 1 minute, 55°C for 1 minute
and 72°C for 2 minutes, was repeated 30 times. After completion of this procedure,
the reaction solution was heated at 72°C for 10 minutes.
[0393] The L7A4-DNA fragment, encoding a portion of the FRL
3, CDRL
3, FRL
4 and a portion of the constant region was prepared as follows.
Composition of the PCR reaction solution: |
plasmid pME-L DNA, 200 ng; |
oligonucleotide primer 7AL4P, 80 pmol; |
oligonucleotide primer 7AL4N, 80 pmol; |
dNTP cocktail, 20 µl; |
10×Pfu buffer, 20 µl; |
Pfu DNA polymerase, 10 units; and |
redistilled water to a final volume of 200 µl. |
[0394] The PCR reaction was conducted as follows. The solution was first heated at 94°C
for 2 minutes, after which a cycle of heating to 94°C for 1 minute, 55°C for 1 minute
and 72°C for 2 minutes, was repeated 30 times. After completion of this procedure,
the reaction solution was heated at 72°C for 10 minutes.
[0395] The L7A5-DNA fragment, encoding a portion of the FRL
4 and the constant region altered to have an EcoRI restriction enzyme cleavage site
at the 3'-end, was prepared as follows.
Composition of the PCR reaction solution: |
plasmid pHL15-27 DNA, 200 ng; |
oligonucleotide primer 7ALCP, 80 pmol; |
oligonucleotide primer 7ALCN, 80 pmol; |
dNTP cocktail, 20 µl; |
10×Pfu buffer, 20 µl; |
Pfu DNA polymerase, 10 units; and |
redistilled water to a final volume of 200 µl. |
[0396] The PCR reaction was conducted as follows. The solution was first heated at 94°C
for 2 minutes, after which a cycle of heating to 94°C for 1 minute, 55°C for 1 minute
and 72°C for 2 minutes, was repeated 30 times. After completion of this procedure,
the reaction solution was heated at 72°C for 10 minutes.
[0397] An equal volume of phenol-chloroform (50% v/v phenol saturated with water, 48% v/v
chloroform, 2% v/v isoamyl alcohol) was added to 200 µl of each of the PCR products,
and vigorously mixed for 1 minute. After this time, the mixture was centrifuged at
10,000 x g, and the aqueous layer was recovered and mixed with an equal volume of
chloroform-isoamyl alcohol (96% v/v chloroform and 4% v/v isoamyl alcohol), which
was again vigorously mixed for 1 minute. The resulting mixture was centrifuged at
10,000 x g and the aqueous layer was recovered (the series of steps recited in this
paragraph is referred to, herein, as "phenol extraction").
[0398] Ethanol precipitation was then performed on the recovered aqueous layer. As used
and referred to herein, "ethanol precipitation" consists of adding, with mixing, a
one tenth volume of 3M sodium acetate (pH 5.2) and 2.5 volumes of 100% ethanol to
the solution to be treated, and freezing the mixture using dry ice. The resulting
mixture is then centrifuged at 10,000 x g to recover DNA as a precipitate.
[0399] After phenol extraction and ethanol precipitation, the resulting DNA precipitate
was vacuum-dried, dissolved in a minimum of redistilled water, and separated by 5%
w/v polyacrylamide gel electrophoresis. After electrophoresis, the gel was stained
with a 1 µg/ml aqueous solution of ethidium bromide to allow detection of DNA under
UV light. The DNA bands corresponding to L7A1-DNA, L7A2-DNA, L7A3-DNA, L7A4-DNA and
L7A5-DNA were cut out using a razor blade and eluted from the gel using Centriruter
and Centricon-10, as described above. The eluted DNA was then concentrated by centrifugation
at 7,500 x g, followed by ethanol precipitation, and finally dissolved in 50 µl of
distilled water.
b) Second stage PCR
[0400] The outline of the second stage PCR for the production of VHH-DNA is shown in Figure
9.
[0401] L7A1.2-DNA, in which the L7A1-DNA and L7A2-DNA fragments, described above, were fused,
was prepared as follows.
Composition of the PCR reaction solution: |
L7A1-DNA solution prepared in the first stage PCR, 10 µl; |
L7A2-DNA solution prepared in the first stage PCR, 10 µl; |
oligonucleotide primer 7AL1P, 80 pmol; |
oligonucleotide primer 7AL2N, 80 pmol; |
dNTP cocktail, 20 µl; |
10×Pfu buffer, 20 µl; |
Pfu DNA polymerase, 10 units; and |
redistilled water to a final volume of 200 µl. |
[0402] The PCR reaction was conducted as follows. The solution was first heated at 94°C
for 2 minutes, after which a cycle of heating to 94°C for 1 minute, 55°C for 1 minute
and 72°C for 2 minutes, was repeated 30 times. After completion of this procedure,
the reaction solution was heated at 72°C for 10 minutes.
[0403] L7A4.5-DNA, in which the L7A4-DNA and L7A5-DNA fragments described above were fused,
was prepared as follows.
Composition of the reaction solution: |
L7A4-DNA solution prepared in the first stage PCR, 10 µl; |
L7A5-DNA solution prepared in the first stage PCR, 10 µl; |
oligonucleotide primer 7AL4P, 80 pmol; |
oligonucleotide primer 7ALCN, 80 pmol; |
dNTP cocktail, 20 µl; |
10×Pfu buffer, 20 µl; |
Pfu DNA polymerase, 10 units; and |
redistilled water to a final volume of 200 µl. |
[0404] The PCR reaction was conducted as follows. The solution was first heated at 94°C
for 2 minutes, after which a cycle of heating to 94°C for 1 minute, 55°C for 1 minute
and 72°C for 2 minutes, was repeated 30 times. After completion of this procedure,
the reaction solution was heated at 72°C for 10 minutes.
[0405] First, phenol extraction and then ethanol precipitation were performed on the amplified
PCR L7A1.2-DNA and L7A4.5-DNA fragments, and these fragments were then separated by
5% w/v polyacrylamide gel electrophoresis. After electrophoresis, the gel was stained
with 1 µg/ml of ethidium bromide, and the bands detected under UV light were cut out
using a razor blade and eluted from the gel using a Centriruter and Centricon-10,
as described above. The eluted DNA was concentrated first by centrifugation at 7,500
x g, then by ethanol precipitation, and then dissolved in 50 µl of distilled water.
c) Third stage PCR
[0406] The outline of the third stage PCR for the production of VHH-DNA is shown in Figure
10.
[0407] The VHH-DNA fragment in which the above described L7A1.2-DNA and L7A4.5-DNA fragments
and L7A3-DNA were fused was prepared as follows.
Composition of the PCR reaction solution: |
L7A1.2-DNA solution prepared in the second stage PCR, 10 µl; |
L7A4.5-DNA solution prepared in the second stage PCR, 10 µl; |
L7A3-DNA solution prepared in the first stage PCR, 10 µl; |
oligonucleotide primer 7AL1P, 80 pmol; |
oligonucleotide primer 7ALCN, 80 pmol; |
dNTP cocktail, 20 µl; |
10×Pfu buffer, 20 µl; |
Pfu DNA polymerase, 10 units; and |
redistilled water to a final volume of 200 µl. |
[0408] The PCR reaction was conducted as follows. The solution was first heated at 94°C
for 2 minutes, after which a cycle of heating to 94°C for 1 minute, 55°C for 1 minute
and 72°C for 2 minutes, was repeated 30 times. After completion of this procedure,
the reaction solution was heated at 72°C for 10 minutes.
[0409] The amplified PCR VHH-DNA fragment was subjected first to phenol extraction and then
to ethanol precipitation, before separation on a 5% w/v polyacrylamide electrophoresis
gel. After electrophoresis, the gel was stained with 1 µg/ml of ethidium bromide and
the VHH-DNA band detected under UV light was cut out using a razor blade and eluted
from the gel using a Centriruter and Centricon-10, as described above. The eluted
DNA was then concentrated by centrifugation at 7,500 x g, followed by ethanol precipitation,
and finally dissolved in 50 µl of distilled water.
[0410] The construction of an expression plasmid carrying VHH-DNA fragment is outlined in
Figure 11.
[0411] The VHH-DNA fragment obtained above was further purified by phenol extraction followed
by ethanol precipitation, and it was then digested with the restriction enzymes Hind
III and EcoRI.
[0412] One µg of cloning plasmid pHSG399 DNA (Takara Shuzo Co., Ltd.) was digested with
the restriction enzymes Hind III and EcoRI, and then dephosphorylated with alkaline
phosphatase (derived from calf intestine; hereinafter abbreviated as CIP). The resulting,
dephosphorylated plasmid pHSG399 DNA and the digested VHH-DNA fragment were ligated
using a DNA Ligation Kit Version 2.0 (Takara Shuzo Co., Ltd.) using the manufacturer's
protocol.
[0413] The ligated DNA was recovered by ethanol precipitation, dissolved in 5 µl of redistilled
water, and then mixed with
E. coli JM109 Electro-Cell (Takara Shuzo Co., Ltd.). The mixture was transferred to a Gene
Pulser/
E. coli Pulser Cuvette, 0.1 cm (BioRad) and the ligated mix was then used to transform the
E. coli JM 109 using Gene Pulser II (BioRad) by the manufacturer's protocol (the series of
steps in this paragraph is referred to herein as "transformation").
[0414] After transformation, the cells were plated onto LB agar medium [Bacto-tryptone (Difco)
10 g, Bacto-yeast extract (Difco) 5 g, NaCl 10 g, Bacto-agar (Difco) 15g; dissolved
in distilled water,
q.s. to 11] containing final concentrations of 1 mM IPTG (isopropylthio-β-D-galactoside;
Takara Shuzo Co., Ltd.), 0.1% w/v X-Gal (5-bromo-4-chloro-3-indolyl-β-D-galactoside;
Takara Shuzo Co., Ltd.) and 50 µg/ml chloramphenicol, and the plates were incubated
at 37°C overnight to obtain
E. coli transformants.
[0415] Any white transformants obtained were cultured in 2 ml of liquid LB medium at 37°C
overnight, and plasmid DNA was extracted from the resulting culture by the alkaline-SDS
method [Sambrook, J.,
et al., (1989), in "Molecular Cloning: A Laboratory Manual (2nd Edition)", Cold Spring Harbor
Laboratory Press].
[0416] The resulting, extracted plasmid DNA was digested with the restriction enzymes Hind
III and EcoRI, and a clone carrying the VHH-DNA fragment was then selected by 1% w/v
agarose gel electrophoresis.
[0417] Plasmid pHSGHH7 carrying a fusion fragment of the variable region of the humanised
HH type HFE7A light chain and DNA encoding the constant region of human immunoglobulin
κ chain was obtained accordingly. The transformant
E. coli pHSGHH7 SANK 73497 harboring plasmid pHSGHH7 was deposited with the Kogyo Gijutsuin
Seimei-Kogaku Kogyo Gijutsu Kenkyujo on August 22, 1997, in accordance with the Budapest
Treaty, and was accorded the accession number FERM BP-6073.
[0418] Using above described plasmid pHSGHH7, it was then possible to construct the expression
vector plasmid p7AL-HH, carrying the DNA of SEQ ID No. 49 of the Sequence Listing
and which encodes the humanised HH type HFE7A light chain polypeptide of SEQ ID No.
50 of the Sequence Listing.
[0419] One µg of pEE.12.1 DNA (Lonza), an expression vector for mammalian cells, was digested
with the restriction enzymes Hind III and EcoRI, and then dephosphorylated using CIP.
The resulting digested, dephosphorylated plasmid DNA (100 ng) was ligated with 10
µg of the pHSGHH7 DNA fragment which had also been digested with Hind III and EcoRI,
using a DNA Ligation Kit Version 2.0 (Takara Shuzo Co., Ltd.). The ligation mix was
then used to transform
E. coli JM109 (as described above), which was then plated on LB agar plates containing 50
µg/ml ampicillin.
[0420] The transformants obtained by this method were cultured in 2 ml of liquid LB medium
containing 50 µg/ml ampicillin at 37°C overnight, and plasmid DNA was subsequently
extracted from the resulting culture by the alkaline-SDS method.
[0421] The extracted plasmid DNA was digested with Hind III and EcoRI, and subjected to
1% w/v agarose gel electrophoresis to confirm the presence or absence of the insert
of interest. This enabled the isolation of the plasmid p7AL-HH, which contains a fusion
fragment having the variable region of the humanised HH type HFE7A light chain together
with DNA encoding the constant region of the human immunoglobulin κ chain. The fusion
fragment was found to be located downstream of the cytomegalovirus (CMV) promoter
in the correct orientation.
4) Construction of plasmid p7AL-HM (expression plasmid for humanised HM type HFE7A light
chain)
[0422] The VHM-DNA fragment of SEQ ID No. 51 of the Sequence Listing encoding the amino
acid sequence of SEQ ID No. 52 of the Sequence Listing was produced by performing
a 3-stage PCR, inserted into a plasmid vector and then cloned into
E. coli.
a) First stage PCR
[0423] The outline of the first stage PCR for the preparation of the VHM-DNA fragment is
shown in Figure 12.
[0424] The L7A1-DNA fragment, encoding a secretion signal sequence and a portion of FRL
1 having a Hind III restriction enzyme cleavage site added at the 5'-end, the L7A2-DNA
fragment, encoding a portion of FRL
1, CDRL
1, FRL
2 and a portion of CDRL
2, and the L7A5-DNA fragment, encoding a portion of FRL
4 and the constant region having an EcoRI site added at the 3'-end, were used in this
process, and were those obtained in the preparation of the VHH-DNA fragment in 2)
above.
[0425] An ML7A3-DNA fragment, encoding CDRL
2, FRL
3, CDRL
3, FRL
4 and a portion of the constant region, was prepared as follows.
Composition of the PCR reaction solution: |
plasmid pME-L DNA, 200 ng; |
oligonucleotide primer 7AL3PA, 80 pmol; |
oligonucleotide primer 7AL4NA, 80 pmol; |
dNTP cocktail, 20 µl; |
10×Pfu buffer, 20 µl; |
Pfu DNA polymerase, 10 units; and |
redistilled water to a final volume of 200 µl. |
[0426] The PCR reaction was conducted as follows. The solution was first heated at 94°C
for 2 minutes, after which a cycle of heating to 94°C for 1 minute, 55°C for 1 minute
and 72°C for 2 minutes, was repeated 30 times. After completion of this procedure,
the reaction solution was heated at 72°C for 10 minutes.
[0427] The PCR products were subjected first to phenol extraction and then to ethanol precipitation,
and then separated by 5% w/v polyacrylamide gel electrophoresis. After electrophoresis,
the gel was stained with 1 µg/ml of ethidium bromide and the DNA band detected under
UV light, corresponding to ML7A3-DNA, was cut out using a razor blade and eluted from
the gel using a Centriruter and Centricon-10, as described above. The eluted DNA was
then concentrated by centrifugation at 7,500 x g followed by ethanol precipitation,
and then dissolved in 50 µl of distilled water.
b) Second stage PCR
[0428] The outline of the second stage PCR for the preparation of VHM-DNA is shown in Figure
13.
[0429] A VHM-DNA fusion fragment comprising the L7A1.2-DNA, the ML7A3-DNA and the L7A5-DNA
fragment above was prepared as follows.
Composition of the PCR reaction solution: |
L7A1.2-DNA solution prepared in the second stage PCR, 10 µl; |
ML7A3-DNA solution prepared in the first stage PCR, 10 µl; |
L7A5-DNA solution prepared in the first stage PCR, 10 µl; |
oligonucleotide primer 7AL1P, 80 pmol; |
oligonucleotide primer 7ALCN, 80 pmol; |
dNTP cocktail, 20 µl; |
10×Pfu buffer, 20 µl; |
Pfu DNA polymerase, 10 units; and |
redistilled water to a final volume of 200 µl. |
[0430] The PCR reaction was conducted as follows. The solution was first heated at 94°C
for 2 minutes, after which a cycle of heating to 94°C for 1 minute, 55°C for 1 minute
and 72°C for 2 minutes, was repeated 30 times. After completion of this procedure,
the reaction solution was heated at 72°C for 10 minutes.
[0431] The resulting, amplified VHM-DNA fragment was subjected first to phenol extraction
and then to ethanol precipitation, and then separated by 5% w/v polyacrylamide gel
electrophoresis. After electrophoresis, the gel was stained with 1 µg/ml of ethidium
bromide and the VHM-DNA band thus detected was cut out using a razor blade and eluted
from the gel using a Centriruter and Centricon-10, as described above. The eluted
DNA was concentrated by centrifugation at 7,500 x g, followed by ethanol precipitation,
and dissolved in 50 µl of distilled water.
[0432] The construction of an expression plasmid carrying VHM-DNA fragment is outlined in
Figure 14.
[0433] The VHM-DNA obtained above was further purified by phenol extraction followed by
ethanol precipitation, and then digested with the restriction enzymes Hind III and
EcoRI.
[0434] One µg of the cloning plasmid pHSG399 DNA (Takara Shuzo Co., Ltd.) was digested with
the restriction enzymes Hind III and EcoRI, and then dephosphorylated using CIP. The
resulting dephosphorylated pHSG399 DNA was then ligated with VHM-DNA, which had also
been digested with Hind III and EcoRI, using a DNA Ligation Kit Version 2.0 (Takara
Shuzo Co., Ltd.).
E. coli JM109 was then transformed with the ligated DNA and spread onto LB agar medium containing
final concentrations of 1 mM IPTG, 0.1% w/v X-Gal and 50 µg/ml chloramphenicol. The
white transformants obtained were cultured in 2 ml liquid LB medium containing 50
µg/ml chloramphenicol at 37°C overnight, and plasmid DNA was extracted from the resulting
culture by the alkaline-SDS method. The extracted plasmid DNA was then digested with
Hind III and EcoRI, and a clone carrying VHM-DNA fragment was selected using 1% w/v
agarose gel electrophoresis.
[0435] Accordingly, plasmid pHSGHM17, carrying a fusion fragment of the variable region
of the humanised HM type HFE7A light chain and DNA encoding the constant region of
human Igκ chain, was obtained. The transformant
E. coli pHSGHM17 SANK 73597 harboring plasmid pHSGHM17 was deposited with the Kogyo Gijutsuin
Seimei-Kogaku Kogyo Gijutsu Kenkyujo on August 22, 1997, in accordance with the Budapest
Treaty, and was accorded the accession number FERM BP-6072.
[0436] Using the above described plasmid pHSGHM17, an expression vector plasmid p7AL-HM
was constructed that carried the DNA of SEQ ID No. 51 of the Sequence Listing, encoding
the humanised HM type HFE7A light chain polypeptide of SEQ ID No. 52 of the Sequence
Listing.
[0437] One µg of pEE.12.1 DNA (Lonza), an expression vector for mammalian cells, was digested
with the restriction enzymes Hind III and EcoRI, and then dephosphorylated using CIP.
The resulting digested, dephosphorylated plasmid DNA (100 ng) was ligated with 10
µg of the pHSGHM17-DNA fragment which had also been digested with Hind III and EcoRI,
using a DNA Ligation Kit Version 2.0 (Takara Shuzo Co., Ltd.). The ligation mix was
then used to transform
E. coli JM109 (as described above), which was then plated on LB agar plates containing 50
µg/ml ampicillin.
[0438] The transformants obtained by this method were cultured in 2 ml of liquid LB medium
containing 50 µg/ml ampicillin at 37°C overnight, and plasmid DNA was subsequently
extracted from the resulting culture by the alkaline-SDS method.
[0439] The extracted plasmid DNA was digested with Hind III and EcoRI, and subjected to
1% w/v agarose gel electrophoresis to confirm the presence or absence of the insert
of interest. This enabled the isolation of the plasmid p7AL-HM, which contains a fusion
fragment having the variable region of the humanised HM type HFE7A light chain together
with DNA encoding the constant region of the human immunoglobulin κ chain. The fusion
fragment was found to be located downstream of the cytomegalovirus (CMV) promoter
in the correct orientation.
5) Construction of plasmid p7AL-MM (expression plasmid for humanised MM type HFE7A light
chain)
[0440] The VMM-DNA fragment of SEQ ID No. 53 of the Sequence Listing encoding the amino
acid sequence of SEQ ID No. 54 of the Sequence Listing was produced by performing
3-stage PCR, inserted into a plasmid vector, and then cloned into
E. coli.
a) First stage PCR
[0441] The outline of the first stage PCR for the preparation of VMM-DNA is shown in Figure
15.
[0442] The L7A1-DNA fragment, encoding a secretion signal sequence and a portion of FRL
1 and having a HindIII restriction enzyme cleavage site added at the 5'-end, and the
L7A5-DNA fragment encoding a portion of FRL
4 and the constant region having an EcoRI restriction site added at the 3'-end, were
as obtained in the preparation of the VHH-DNA fragment in (2) above. These fragments
were used in the first stage PCR construction of VMM-DNA.
[0443] The ML7A2M-DNA fragment, encoding a portion of FRL
1, CDRL
1, FRL
2, CDRL
2 and a portion of FRL
3, was prepared as follows.
Composition of the PCR reaction solution: |
plasmid pME-L DNA, 200 ng; |
oligonucleotide primer 7AL2P, 80 pmol; |
oligonucleotide primer M7AL2N, 80 pmol; |
dNTP cocktail, 20 µl; |
10×Pfu buffer, 20 µl; |
Pfu DNA polymerase, 10 units; and |
redistilled water to a final volume of 200 µl. |
[0444] The PCR reaction was conducted as follows. The solution was first heated at 94°C
for 2 minutes, after which a cycle of heating to 94°C for 1 minute, 55°C for 1 minute
and 72°C for 2 minutes, was repeated 30 times. After completion of this procedure,
the reaction solution was heated at 72°C for 10 minutes.
[0445] The ML7A3M-DNA fragment, encoding a portion of FRL
3, CDRL
3, FRL
4 and a portion of the constant region, was prepared as follows.
Composition of the PCR reaction solution: |
plasmid pME-L DNA, 200 ng; |
oligonucleotide primer M7AL3PA, 80 pmol; |
oligonucleotide primer 7AL4NA, 80 pmol; |
dNTP cocktail, 20 µl; |
10×Pfu buffer, 20 µl; |
Pfu DNA polymerase, 10 units; and |
redistilled water to a final volume of 200 µl. |
[0446] The PCR reaction was conducted as follows. The solution was first heated at 94°C
for 2 minutes, after which a cycle of heating to 94°C for 1 minute, 55°C for 1 minute
and 72°C for 2 minutes, was repeated 30 times. After completion of this procedure,
the reaction solution was heated at 72°C for 10 minutes.
[0447] The PCR products were subjected first to phenol extraction and then to ethanol precipitation,
and then separated by 5% w/v polyacrylamide gel electrophoresis. After electrophoresis,
the gel was stained with 1 µg/ml of ethidium bromide and the DNA bands corresponding
to ML7A2M-DNA and ML7A3M-DNA, as detected by UV light, were cut out using a razor
blade and eluted from the gel using a Centriruter and Centricon-10, as described above.
The eluted DNA's were concentrated by centrifugation at 7,500 x g, followed by ethanol
precipitation, and dissolved in 50 µl of distilled water.
b) Second stage PCR
[0448] The outline of the second stage PCR for the preparation of the VMM-DNA is shown in
Figure 16.
[0449] The ML7A1.2-DNA fragment, comprising a fusion of the above ML7A1-DNA and ML7A2M-DNA
fragmentsm, was prepared as follows.
Composition of the PCR reaction solution: |
L7A1-DNA solution prepared in the first stage PCR, 10 µl; |
ML7A2M-DNA solution prepared in the first stage PCR, 10 µl; |
oligonucleotide primer 7AL1P, 80 pmol; |
oligonucleotide primer 7AL2N, 80 pmol; |
dNTP cocktail, 20 µl; |
10×Pfu buffer, 20 µl; |
Pfu DNA polymerase, 10 units; and |
redistilled water to a final volume of 200 µl. |
[0450] The PCR reaction was conducted as follows. The solution was first heated at 94°C
for 2 minutes, after which a cycle of heating to 94°C for 1 minute, 55°C for 1 minute
and 72°C for 2 minutes, was repeated 30 times. After completion of this procedure,
the reaction solution was heated at 72°C for 10 minutes.
[0451] The resulting, amplified ML7A1.2-DNA fragment was subjected first to phenol extraction
and then to ethanol precipitation, and separated by 5% w/v polyacrylamide gel electrophoresis.
After electrophoresis, the gel was stained with 1 µg/ml of ethidium bromide and the
fusion-DNA band thus detected was cut out using a razor blade and eluted from the
gel using a Centriruter and Centricon-10, as described above. The eluted DNA was concentrated
by centrifugation at 7,500 x g, followed by ethanol precipitation, and dissolved in
50 µl of distilled water.
c) Third stage PCR
[0452] The outline of the third stage PCR for the preparation of the VMM-DNA is shown in
Figure 17.
[0453] The VMM-DNA fragment, comprising a fusion of the above ML7A1.2-DNA, ML7A3M-DNA and
the L7A5-DNA fragment, was prepared as follows.
Composition of the PCR reaction solution: |
ML7A1.2-DNA solution prepared in the second stage PCR, 10 µl; |
ML7A3M-DNA solution prepared in the first stage PCR, 10 µl; |
L7A5-DNA solution prepared in the first stage PCR, 10 µl; |
oligonucleotide primer 7AL1P, 80 pmol; |
oligonucleotide primer 7ALCN, 80 pmol; |
dNTP cocktail, 20 µl; |
10×Pfu buffer, 20 µl; |
Pfu DNA polymerase, 10 units; and |
redistilled water to a final volume of 200 µl. |
[0454] The PCR reaction was conducted as follows. The solution was first heated at 94°C
for 2 minutes, after which a cycle of heating to 94°C for 1 minute, 55°C for 1 minute
and 72°C for 2 minutes, was repeated 30 times. After completion of this procedure,
the reaction solution was heated at 72°C for 10 minutes.
[0455] The resulting, amplified VMM-DNA fragment was subjected first to phenol extraction
and then to ethanol precipitation, and separated by 5% w/v polyacrylamide gel electrophoresis.
After electrophoresis, the gel was stained with 1 µg/ml of ethidium bromide and the
VMM-DNA band thus detected was cut out using a razor blade and eluted from the gel
using a Centriruter and Centricon-10, as described above. The eluted DNA was concentrated
by centrifugation at 7,500 x g, followed by ethanol precipitation, and dissolved in
50 µl of distilled water.
[0456] The construction of a plasmid carrying the VMM-DNA fragment is outlined in Figure
18.
[0457] The VMM-DNA obtained above was further purified by phenol extraction followed by
ethanol precipitation, and then digested with the restriction enzymes Hind III and
EcoRI.
[0458] One µg of the cloning plasmid pHSG399 DNA (Takara Shuzo Co., Ltd.) was digested with
the restriction enzymes Hind III and EcoRI, and then dephosphorylated using CIP. The
resulting dephosphorylated pHSG399 DNA was then ligated with VMM-DNA, which had also
been digested with Hind III and EcoRI, using a DNA Ligation Kit Version 2.0 (Takara
Shuzo Co., Ltd.).
E. coli JM109 was then transformed with the ligated DNA and spread onto LB agar medium containing
final concentrations of 1 mM IPTG, 0.1% w/v X-Gal and 50 µg/ml chloramphenicol. The
white transformants obtained were cultured in 2 ml liquid LB medium containing 50
µg/ml chloramphenicol at 37°C overnight, and plasmid DNA was extracted from the resulting
culture by the alkaline-SDS method. The extracted plasmid DNA was then digested with
Hind III and EcoRI, and a clone carrying VMM-DNA fragment was selected using 1% w/v
agarose gel electrophoresis.
[0459] Accordingly, plasmid pHSGMM6, carrying a fusion fragment of the variable region of
the MM type HFE7A light chain and DNA encoding the constant region of human immunoglobulin
κ chain was obtained. The transformant
E. coli pHSGMM6 SANK 73697 harboring plasmid pHSGMM6 was deposited with the Kogyo Gijutsuin
Seimei-Kogaku Kogyo Gijutsu Kenkyujo on August 22, 1997, in accordance with the Budapest
Treaty, and was accorded the accession number FERM BP-6071.
[0460] The expression vector plasmid p7AL-MM was constructed using the above described plasmid
pHSGMM6, and carries the DNA of SEQ ID No. 53 of the Sequence Listing encoding the
MM type HFE7A light chain polypeptide ofSEQ ID No. 54 of the Sequence Listing.
[0461] One µg of pEE.12.1 DNA (Lonza), an expression vector for mammalian cells, was digested
with the restriction enzymes Hind III and EcoRI, and then dephosphorylated using CIP.
The resulting digested, dephosphorylated plasmid DNA (100 ng) was ligated with 10
µg of the pHSGMM6-DNA fragment which had also been digested with Hind III and EcoRI,
using a DNA Ligation Kit Version 2.0 (Takara Shuzo Co., Ltd.). The ligation mix was
then used to transform
E. coli JM109 (as described above), which was then plated on LB agar plates containing 50
µg/ml ampicillin.
[0462] The transformants obtained by this method were cultured in 2 ml of liquid LB medium
containing 50 µg/ml ampicillin at 37°C overnight, and plasmid DNA was subsequently
extracted from the resulting culture by the alkaline-SDS method.
[0463] The extracted plasmid DNA was digested with Hind III and EcoRI, and subjected to
1% w/v agarose gel electrophoresis to confirm the presence or absence of the insert
of interest. This enabled the isolation of the plasmid p7AL-MM, which contains a fusion
fragment having the variable region of the MM type HFE7A light chain together with
DNA encoding the constant region of the human immunoglobulin κ chain. The fusion fragment
was found to be located downstream of the cytomegalovirus (CMV) promoter in the correct
orientation.
6) Verification of the nucleotide sequences
[0464] To verify that the DNA inserts of plasmids p7AL-HH, p7AL-HM and p7AL-MM have the
desired nucleotide sequences, their DNA inserts were analyzed to determine the nucleotide
sequences. The oligonucleotide primers prepared for nucleotide sequencing were as
follows:

[0465] The positions to which each primer binds are shown in Figure 19. The determination
of the nucleotide sequences was performed by the dideoxynucleotide chain termination
method [Sanger, F. S.
et al., (1977), Proc. Natl. Acad. Sci. USA,
74, 5463]. The templates used were the respective plasmid DNA's purified by the alkaline-SDS
method and by the caesium chloride method [
c.f. Sambrook, J.
et al. (1989), in "Molecular Cloning: A Laboratory Manual, Second Edition" Cold Spring Harbor
Laboratory Press, for both methods].
[0466] More specifically, 3 µg of purified plasmid DNA were dissolved in 13 µl of redistilled
water, followed by the addition of 2 µl each of 2 mM EDTA and 2 N NaOH, and the mixture
was then allowed to stand at room temperature for 5 minutes. Next, 4 µl of 10 M ammonium
acetate solution and 100 µl of 100% ethanol were added and mixed in, and the mixture
was placed on dry ice for 10 minutes. After this time, the mixture was centrifuged
at 15,000 x g, and the pellet obtained was washed with 80% v/v aqueous ethanol and
then vacuum-dried. The resulting, dried DNA was dissolved in 7 µl of redistilled water
and used for nucleotide sequencing.
[0467] The nucleotide sequencing reaction was performed using a 7-Deaza-Sequenase, Version
2.0 Kit (for dCTP; Amersham). A mixture of 7 µl of the above described plasmid solution,
1 pmol of a primer, which had been synthesised in advance, and 1 µl of reaction buffer
(provided with the kit) was made up, and this mixture was then incubated at 65°C for
2 minutes. Subsequently, the DNA was annealed with the primer by gradually cooling
to room temperature, followed by labeling with [α-
32P]dCTP (Amersham). The reaction product was then subjected to gel electrophoresis
on a 5% w/v polyacrylamide gel containing 8 M urea in 1× TBE buffer (100 mM Tris,
100 mM boric acid, 1 mM EDTA, pH8.3). After drying, the sequences on the gel were
read by autoradiography. As used herein, all nucleotide sequencing was performed as
above, unless otherwise specified.
[0468] As a result, it was established that the DNA inserts of plasmids p7AL-HH, p7AL-HM
and p7AL-MM had the expected nucleotide sequences, that is:
SEQ ID No. 49 encoding the polypeptide sequence of SEQ ID No. 50; SEQ ID No. 51 encoding
the polypeptide sequence of SEQ ID No. 52; and
SEQ ID No. 53 encoding the polypeptide sequence of SEQ ID No. 54; respectively, of
the Sequence Listing.
EXAMPLE 3
Construction of an Expression Vector for the Heavy Chain of the Humanised Version
of the HFE7A Antibody
(1) Construction of a plasmid carrying the heavy chain variable region DNA of humanised
HFE7A
1) Synthesis of primers for preparing the variable region of the humanised heavy chain
[0469] The synthesis of DNA (SEQ ID No. 74 of the Sequence Listing) encoding a polypeptide
chain comprising the variable region of humanised anti-Fas antibody HFE7A heavy chain
and the 5 amino acid residues at the N-terminus of the IgG-CHl region (SEQ ID No.
75 of the Sequence Listing) was performed using a combination of PCR.
[0470] The following 8 PCR primers were synthesised as described above:


2) Construction of plasmid pBL7A27
[0471] The VD-DNA fragment (SEQ ID No. 74 of the Sequence Listing) encoding the amino acid
sequence of SEQ ID No. 75 of the Sequence Listing, was prepared by performing 3-stage
PCR, then inserted into a plasmid and cloned into
E. coli.
a) First stage PCR
[0472] The outline of the first stage PCR for the preparation of VD-DNA is shown in Figure
20.
[0473] The H7A1-DNA fragment, encoding a secretion signal sequence and an N-terminal portion
of FRH
1 and having a Hind III restriction enzyme cleavage site added at the 5'-end, was prepared
as follows.
Composition of the PCR reaction solution: |
plasmid pME-H DNA, 200 ng; |
oligonucleotide primer 7AH1P, 80 pmol; |
oligonucleotide primer 7AH1NNEW, 80 pmol; |
dNTP cocktail, 20 µl; |
10×Pfu buffer, 20 µl; |
Pfu DNA polymerase, 10 units; and |
redistilled water to a final volume of 200 µl. |
[0474] The PCR reaction was conducted as follows. The solution was first heated at 94°C
for 2 minutes, after which a cycle of heating to 94°C for 1 minute, 55°C for 1 minute
and 72°C for 2 minutes, was repeated 30 times. After completion of this procedure,
the reaction solution was heated at 72°C for 10 minutes.
[0475] The H7A2-DNA fragment, encoding a portion of FRH
1, CDRH
1, and a portion of FRH
2, was prepared as follows.
Composition of the PCR reaction solution: |
plasmid pME-H DNA, 200 ng; |
oligonucleotide primer 7AH2N, 80 pmol; |
oligonucleotide primer 7AH2PNEW, 80 pmol; |
dNTP cocktail, 20 µl; |
10×Pfu buffer, 20 µl; |
Pfu DNA polymerase, 10 units; and |
redistilled water to a final volume of 200 µl. |
[0476] The PCR reaction was conducted as follows. The solution was first heated at 94°C
for 2 minutes, after which a cycle of heating to 94°C for 1 minute, 55°C for 1 minute
and 72°C for 2 minutes, was repeated 30 times. After completion of this procedure,
the reaction solution was heated at 72°C for 10 minutes.
[0477] The H7A3-DNA fragment, encoding a portion of FRH
2, CDRH
2 and a portion of FRH
3, was prepared as follows.
Composition of the PCR reaction solution: |
plasmid pME-H DNA, 200 ng; |
oligonucleotide primer 7AH3P, 80 pmol; |
oligonucleotide primer 7AH3N, 80 pmol; |
dNTP cocktail, 20 µl; |
10×Pfu buffer, 20 µl; |
Pfu DNA polymerase, 10 units; and |
redistilled water to a final volume of 200 µl. |
[0478] The PCR reaction was conducted as follows. The solution was first heated at 94°C
for 2 minutes, after which a cycle of heating to 94°C for 1 minute, 55°C for 1 minute
and 72°C for 2 minutes, was repeated 30 times. After completion of this procedure,
the reaction solution was heated at 72°C for 10 minutes.
[0479] The H7A4-DNA fragment, encoding a portion of FRH
3, CDRH
3, FRH
4 and the 5 N-terminal amino acid residues of the CH1 region, was prepared as follows.
Composition of the PCR reaction solution: |
plasmid pME-H DNA, 200 ng; |
oligonucleotide primer 7AH4P, 80 pmol; |
oligonucleotide primer 7AH4N, 80 pmol; |
dNTP cocktail, 20 µl; |
10×Pfu buffer, 20 µl; |
Pfu DNA polymerase, 10 units; and |
redistilled water to a final volume of 200 µl. |
[0480] The PCR reaction was conducted as follows. The solution was first heated at 94°C
for 2 minutes, after which a cycle of heating to 94°C for 1 minute, 55°C for 1 minute
and 72°C for 2 minutes, was repeated 30 times. After completion of this procedure,
the reaction solution was heated at 72°C for 10 minutes.
[0481] The respective PCR products were first subjected to phenol extraction and then to
ethanol precipitation, and then separated by 5% w/v polyacrylamide gel electrophoresis.
After electrophoresis, the gel was stained with 1 µg/ml of ethidium bromide and the
DNA bands corresponding to H7A1-DNA, H7A2-DNA, H7A3-DNA and H7A4-DNA, detected under
UV light, were cut out using a razor blade and eluted from the gel using a Centriruter
and Centricon-10, as described above. The eluted DNA was concentrated by centrifugation
at 7,500 x g, followed by ethanol precipitation, and dissolved in 50 µl of distilled
water.
b) Second stage PCR
[0482] The outline of the second stage PCR for the preparation of VD-DNA is shown in Figure
21.
[0483] The H7A1.2-DNA fragment, in which the above described H7A1-DNA and H7A2-DNA fragments
were fused, was prepared as follows.
Composition of the PCR reaction solution: |
H7A1-DNA solution prepared in the first stage PCR, 10 µl; |
H7A2-DNA solution prepared in the first stage PCR, 10 µl; |
oligonucleotide primer 7AH1P, 80 pmol; |
oligonucleotide primer 7AH2N, 80 pmol; |
dNTP cocktail, 20 µl; |
10×Pfu buffer, 20 µl; |
Pfu DNA polymerase, 10 units; and |
redistilled water to a final volume of 200 µl. |
[0484] The PCR reaction was conducted as follows. The solution was first heated at 94°C
for 2 minutes, after which a cycle of heating to 94°C for 1 minute, 55°C for 1 minute
and 72°C for 2 minutes, was repeated 30 times. After completion of this procedure,
the reaction solution was heated at 72°C for 10 minutes.
[0485] The H7A3.4-DNA fragment, in which the above described H7A3-DNA and H7A4-DNA fragments
were fused, was prepared as follows.
Composition of the PCR reaction solution: |
H7A3-DNA solution prepared in the first stage PCR, 10 µl; |
H7A4-DNA solution prepared in the first stage PCR, 10 µl; |
oligonucleotide primer 7AH3P, 80 pmol; |
oligonucleotide primer 7AH4N, 80 pmol; |
dNTP cocktail, 20 µl; |
10×Pfu buffer, 20 µl; |
Pfu DNA polymerase, 10 units; and |
redistilled water to a final volume of 200 µl. |
[0486] The PCR reaction was conducted as follows. The solution was first heated at 94°C
for 2 minutes, after which a cycle of heating to 94°C for 1 minute, 55°C for 1 minute
and 72°C for 2 minutes, was repeated 30 times. After completion of this procedure,
the reaction solution was heated at 72°C for 10 minutes.
[0487] The resulting, amplified H7A1.2-DNA and H7A3.4-DNA fragments were subjected first
to phenol extraction and then to ethanol precipitation, and then separated by 5% w/v
polyacrylamide gel electrophoresis. After electrophoresis, the gels were stained with
1 µg/ml of ethidium bromide and the relevant bands thus detected were cut out using
a razor blade and eluted from the gel using a Centriruter and Centricon-10, as described
above. The eluted DNA was concentrated by centrifugation at 7,500 x g, followed by
ethanol precipitation, and dissolved in 50 µl of distilled water.
c) Third stage PCR
[0488] The outline of the third stage PCR for the preparation of VD-DNA is shown in Figure
22.
[0489] The VD-DNA fragment, in which above described H7A1.2-DNA and H7A3.4-DNA fragments
were fused, was prepared as follows.
Composition of the PCR reaction solution: |
H7A1.2-DNA solution prepared in the second stage PCR, 10 µl; |
H7A3.4-DNA solution prepared in the second stage PCR, 10 µl; |
oligonucleotide primer 7AH1P, 80 pmol; |
oligonucleotide primer 7AH4N, 80 pmol; |
dNTP cocktail, 20 µl; |
10×Pfu buffer, 20 µl; |
Pfu DNA polymerase, 10 units; and |
redistilled water to a final volume of 200 µl. |
[0490] The PCR reaction was conducted as follows. The solution was first heated at 94°C
for 2 minutes, after which a cycle of heating to 94°C for 1 minute, 55°C for 1 minute
and 72°C for 2 minutes, was repeated 30 times. After completion of this procedure,
the reaction solution was heated at 72°C for 10 minutes.
[0491] The resulting, amplified VD-DNA fragment was subjected first to phenol extraction
and then to ethanol precipitation, and then separated by 5% w/v polyacrylamide gel
electrophoresis. After electrophoresis, the gel was stained with 1 µg/ml of ethidium
bromide and the VD-DNA band thus detected was cut out using a razor blade and eluted
from the gel using a Centriruter and Centricon-10, as described above. The eluted
DNA was concentrated by centrifugation at 7,500 x g, followed by ethanol precipitation,
and dissolved in 50 µl of distilled water.
[0492] The construction of a plasmid carrying the VD-DNA fragment is outlined in Figure
23.
[0493] The VD-DNA fragment obtained above was further purified by phenol extraction followed
by ethanol precipitation, and then digested with the restriction enzymes Hind III
and ApaI.
[0494] One µg of the plasmid vector pBLUESCRIPT-II SK+ DNA (Stratagene) was digested with
Hind III and Apa I, and then dephosphorylated using CIP. The resulting, dephosphorylated
plasmid DNA and 100 ng of the VD-DNA fragment, which had also been digested with Hind
III and Apa I, were ligated using a DNA Ligation Kit Version 2.0 (Takara Shuzo Co.,
Ltd.). The resulting ligation mix was then used to transform
E. coli JM109, which was then plated on LB agar plates containing final concentrations of
1 mM IPTG, 0.1% w/v X-Gal and 50 µg/ml ampicillin. Any resulting white transformants
were cultured in 2 ml liquid LB medium containing 50 µg/ml ampicillin at 37°C overnight,
and plasmid DNA was then extracted from the culture by the alkaline-SDS method. The
resulting plasmid was digested with Hind III and Apa I and subjected to agarose gel
electrophoresis to confirm the presence or absence of the insert of interest. Accordingly,
the plasmid pBL7A27 with a VD-DNA insert was obtained.
(2) Construction of a plasmid carrying human IgG1 constant region genomic DNA
1) Synthesis of primers for preparing 5'-terminal human IgG1 genomic DNA fragment
[0495] A 5'-terminal human IgG1 genomic DNA fragment was synthesised by PCR. For this, the
following 2 oligonucleotide primers were prepared:

2) Construction of plasmid pIG5'03
[0496] Genomic DNA, comprising the CHl region of human IgGl together with an intron following
a Hind III cleavage sequence, was separated and amplified by PCR using human genomic
DNA as the template, and then inserted into the plasmid pHSG399 (Takara Shuzo Co.,
Ltd.) and cloned into
E. coli. The preparation of this DNA (hereinafter referred to as "IG5'-DNA") is outlined in
Figure 24.
[0497] An IG5'-DNA fragment was prepared as follows.
Composition of the PCR reaction solution: |
human genomic DNA (Clonetech), 2 µg; |
oligonucleotide primer 5'Hind, 80 pmol; |
oligonucleotide primer IGGCPSTN, 80 pmol; |
dNTP cocktail, 20 µl; |
10×Pfu buffer, 20 µl; |
Pfu DNA polymerase, 10 units; and |
redistilled water to a final volume of 200 µl. |
[0498] The PCR reaction was conducted as follows. The solution was first heated at 94°C
for 2 minutes, after which a cycle of heating to 94°C for 1 minute, 55°C for 1 minute
and 72°C for 2 minutes, was repeated 30 times. After completion of this procedure,
the reaction solution was heated at 72°C for 10 minutes.
[0499] The resulting, amplified IG5'-DNA fragment was subjected first to phenol extraction
and then to ethanol precipitation, and separated by 5% w/v polyacrylamide gel electrophoresis.
After electrophoresis, the gel was stained with 1 µg/ml of ethidium bromide and the
IG5'-DNA band thus detected was cut out using a razor blade and eluted from the gel
using a Centriruter and Centricon-10, as described above. The eluted DNA was concentrated
by centrifugation at 7,500 x g, followed by ethanol precipitation, and dissolved in
50 µl of distilled water.
[0500] The IG5'-DNA fragment thus obtained was further purified by phenol extraction and
then ethanol precipitation, and was then digested with the restriction enzymes Hind
III and Pst I.
[0501] One µg of plasmid pHSG399 DNA (Takara Shuzo Co., Ltd.) was digested with the restriction
enzymes Hind III and Pst I, and then dephosphorylated using CIP. The resulting dephosphorylated
plasmid DNA and 100 ng of the IG5'-DNA fragment, which had also been digested with
Hind III and Pst I, were ligated using a DNA Ligation Kit Version 2.0 (Takara Shuzo
Co., Ltd.). The ligation mix was then used to transform
E. coli JM109, which was then plated onto LB agar medium containing final concentrations
of 1 mM IPTG, 0.1% w/v X-Gal and 50 µg/ml chloramphenicol. Any white transformants
obtained were cultured in 2 ml liquid LB medium containing 50 µg/ml chloramphenicol
at 37°C overnight, and plasmid DNA was extracted from the resulting culture by the
alkaline-SDS method. The extracted plasmid DNA was then digested with Hind III and
Pst I, and subjected to 1% w/v agarose gel electrophoresis to confirm the presence
or absence of the insert of interest. Accordingly, the plasmid pIG5'03, containing
a IG5'-DNA fragment insert, was obtained.
(3) Construction of a plasmid carrying human IgG1 constant region genomic DNA
1) Synthesis of primers for preparing 3'-terminal human IgG1 genomic DNA fragment
[0502] A 3'-terminal human IgGl genomic DNA fragment was synthesised by PCR. For this, the
following 2 primers were prepared:

2) Construction of plasmid pIG3'08
[0503] DNA comprising the sequence: intron from human IgG1; hinge region; intron from human
IgGl; CH2 region; intron from human IgGl; CH3 region; and an EcoRI cleavage sequence,
was separated and amplified by PCR using human genomic DNA as the template, and then
inserted into the plasmid pHSG399 (Takara Shuzo Co., Ltd.) and cloned into
E. coli. The preparation of the above DNA (hereinafter referred to as "IG3'-DNA") is outlined
in Figure 25.
[0504] IG3'-DNA was prepared as follows.
Composition of the PCR reaction solution: |
human genomic DNA (Clonetech), 2 µg; |
oligonucleotide primer IGGCPSTP, 80 pmol; |
oligonucleotide primer Eco3', 80 pmol; |
dNTP cocktail, 20 µl; |
10×Pfu buffer, 20 µl; |
Pfu DNA polymerase, 10 units; and |
redistilled water to a final volume of 200 µl. |
[0505] The PCR reaction was conducted as follows. The solution was first heated at 94°C
for 2 minutes, after which a cycle of heating to 94°C for 1 minute, 55°C for 1 minute
and 72°C for 2 minutes, was repeated 30 times. After completion of this procedure,
the reaction solution was heated at 72°C for 10 minutes.
[0506] The resulting, amplified IG3'-DNA fragment was subjected first to phenol extraction
and then to ethanol precipitation, and then separated by 5% w/v polyacrylamide gel
electrophoresis. After electrophoresis, the gel was stained with 1 µg/ml of ethidium
bromide and the IG3'-DNA band thus detected was cut out using a razor blade and eluted
from the gel using a Centriruter and Centricon-10, as described above. The eluted
DNA was concentrated by centrifugation at 7,500 x g, followed by ethanol precipitation,
and dissolved in 50 µl of distilled water.
[0507] The IG3'-DNA fragment thus obtained was further purified by phenol extraction and
then ethanol precipitation, and was then digested with the restriction enzymes EcoRI
and Pst I.
[0508] One µg of plasmid pHSG399 DNA (Takara Shuzo Co., Ltd.) was digested with EcoRI and
Pst I, and then dephosphorylated using CIP. The resulting dephosphorylated plasmid
DNA was then ligated with 100 ng of the IG3'-DNA fragment, which had also been digested
with EcoRI and Pst I, using a DNA Ligation Kit Version 2.0 (Takara Shuzo Co., Ltd.).
The ligation mix was then used to transform
E. coli JM109, which was plated onto LB agar medium containing final concentrations of 1
mM IPTG, 0.1% w/v X-Gal and 50 µg/ml chloramphenicol. Any white colonies were selected
and the plasmid pIG3'08, containing an IG3'-DNA insert, was obtained.
(4) Construction of expression vector plasmid for humanised HFE7A heavy chain
[0509] The expression plasmid vector pEg7AH-H, carrying the DNA of SEQ ID No. 88 of the
Sequence Listing and encoding the humanised HFE7A heavy chain polypeptide of SEQ ID
No. 89 of the Sequence Listing, was constructed using the above described plasmids
pBL7A27, pIG5'03 and pIG3'08. The procedure is outlined in Figure 26.
[0510] Ten µg of plasmid pIG5'03 DNA, comprising the CH1 region of human IgG1 heavy chain
and an intron, was digested with the restriction enzymes ApaI and Kpn I. In addition,
1 µg of pBL7A27 DNA above was also digested with the restriction enzymes Apa I and
Kpn I, and then dephosphorylated using CIP. The resulting dephosphorylated pBL7A27
DNA (100 ng) was ligated with 10 µg of the digested and dephosphorylated pIG5'03 DNA,
using a DNA Ligation Kit Version 2.0 (Takara Shuzo Co., Ltd.). The ligation mix was
then used to transform
E. coli JM109, which was plated on LB medium containing 50 µg/ml ampicillin. Resulting transformants
were cultured in 2 ml liquid LB medium containing 50 µg/ml ampicillin at 37°C overnight,
and plasmid DNA was extracted from the culture by the alkaline-SDS method. The plasmid
was digested with Apa I and Kpn I, or with Hind III and Pst I, to confirm the presence
or absence of the insert of interest by 1% w/v agarose gel electrophoresis. Thus,
the plasmid pBL7AF184, containing a VD-DNA fragment of humanised HFE7A connected with
the IGS'-DNA fragment, was obtained.
[0511] Next, 10 µg of the thus obtained plasmid pBL7AF184 was digested with the restriction
enzymes Hind III and Pst I, and 1 µg of the plasmid pIG3'08 DNA above was likewise
digested with Hind III and Pst I, and dephosphorylated using CIP. The resulting dephosphorylated
pIG3'08 DNA (100 ng) was ligated with 10 µg of the digested pBL7AF184 DNA, using a
DNA Ligation Kit Version 2.0 (Takara Shuzo Co., Ltd.).
E. coli JM109 was transformed with the ligation mix and plated onto LB medium containing
50 µg/ml ampicillin. Any resulting transformants were cultured in 2 ml liquid LB medium
containing 50 µg/ml chloramphenicol at 37°C overnight, and plasmid DNA was extracted
from the culture by the alkaline-SDS method. The plasmid was digested with Hind III
and Pst I, or with Hind III and EcoRI, to confirm the presence or absence of the insert
of interest by 1% w/v agarose gel electrophoresis.
[0512] Plasmid pgHSL7A62, containing a VD-DNA fragment of humanised HFE7A connected to a
genomic DNA fragment encoding human IgGl constant region, was obtained. The transformant
E. coli pgHSL7A62 SANK 73397 harboring plasmid pgHSL7A62 was deposited with the Kogyo Gijutsuin
Seimei-Kogaku Kogyo Gijutsu Kenkyujo on August 22, 1997, in accordance with the Budapest
Treaty, and was accorded the accession number FERM BP-6074.
[0513] Ten microgrammes of the thus obtained plasmid pgHSL7A62 DNA were digested with the
restriction enzymes Hind III and EcoRI and, likewise, 1 µg of the expression plasmid
pEE.6.1 DNA was digested with Hind III and EcoRI, and dephosphorylated using CIP.
The resulting dephosphorylated pEE.6.1 DNA (100 ng) was ligated with 10 µg of the
digested pgHSL7A62 DNA, using a DNA Ligation Kit Version 2.0 (Takara Shuzo Co., Ltd.).
E. coli JM109 was transformed with the ligation mix and plated onto LB medium containing
50 µg/ml ampicillin. Any resulting transformants were cultured in 2 ml liquid LB medium
containing 50 µg/ml ampicillin at 37°C overnight, and plasmid DNA was extracted from
the culture by the alkaline-SDS method. The plasmid was digested with Hind III and
EcoRI, to confirm the presence or absence of the insert of interest by 1% w/v agarose
gel electrophoresis.
[0514] The resulting plasmid, pEg7AH-H, contained a fusion fragment comprising a VD-DNA
fragment of humanised HFE7A and a genomic DNA fragment encoding human IgG1 constant
region in connection and inserted downstream of the CMV promoter in the correct orientation.
(5) Verification of nucleotide sequence
[0515] To verify that the DNA insert of the pEg7AH-H had the expected nucleotide sequence,
the DNA insert was analyzed to determine the nucleotide sequence. For this, the following
primers were synthesised:


[0516] The positions to which each primer binds are shown in Figure 27. The determination
of the nucleotide sequence was performed by the dideoxynucleotide chain termination
method
(ibid.) using, as templates, the respective plasmids purified by the alkaline-SDS method
and the caesium chloride method
(ibid.). It was confirmed that pEg7AH-H had the nucleotide sequence of SEQ ID No. 88 of the
Sequence Listing, encoding the polypeptide of SEQ ID No. 89 of the Sequence Listing.
EXAMPLE 4
Expression in COS-1 Cells
[0517] COS-1 cells (derived from a monkey kidney) were transfected with the expression plasmids
for the humanised HFE7A heavy chain and with the expression plasmids for each of the
humanised HFE7A light chains obtained above. Transfection was performed by electroporation
using the gene transfection apparatus GTE-1 (Shimadzu Seisakusyo, K. K.) equipped
with an FCT-13 chamber having electrodes separated by 2 mm (Shimadzu Seisakusyo, K.
K.).
[0518] COS-1 cells (American Type Culture Collection No. CRL-1650) were grown to semi-confluence
in a culture flask (culture area: 225 cm
2; Sumitomo Bakelite) containing Minimal Essential a medium ["α(+)MEM"; Gibco BRL]
supplemented with 10% v/v FCS (Moregate). Subsequently, the medium was discarded and
the COS-1 cells were detached from the flask by treatment with 3 ml of trypsin-EDTA
solution (Sigma Chemicals Co.) at 37°C for 3 minutes. The detached cells were then
harvested by centrifugation at 800 r.p.m. for 2 minutes, discarding the supernatant
and washing twice with phosphate buffer (0.02% w/v potassium chloride [KCl], 0.02%
w/v potassium dihydrogenphoshate [KH
2PO
4], 0.8% w/v sodium chloride [NaCl], 1.15% w/v disodium hydrogenphosphate [Na
2HPO
4] ; hereinafter referred to as "PBS(-) buffer"; Nissui Pharmaceutical Co., Ltd.).
The washed COS-1 cells were then suspended to a cell density of 1 x 10
8 cells/ml in PBS(-) buffer.
[0519] In parallel, 4 µg of humanised HFE7A heavy chain expression plasmid DNA were mixed
with 4 µg of humanised HFE7A light chain expression plasmid DNA, each purified by
the alkaline-SDS method and caesium chloride density gradient centrifugation. The
resulting mixture was subjected to ethanol precipitation and then suspended in 20
µl of PBS(-) buffer. These mixing, precipitation and resuspension steps were all performed
in the same tube. The whole of the resulting plasmid suspension (20 µl) was mixed
with 20 µl of the previously prepared COS-1 cell suspension (2 x 10
6 cells) and the mixture was transferred to an FCT-13 electroporation chamber (Shimadzu
Seisakusyo, K. K.) having electrodes set 2 mm apart, which was then loaded into gene
transfection apparatus GTE-1 (Shimadzu Seisakusyo, K. K.). Pulses of 600 V, each of
50 µF were applied twice with a 1 second interval, in order transform the COS-1 cells
with the plasmid DNA. After electroporation, the cell-DNA mixture in the chamber was
suspended in 20 µl of α(+)MEM supplemented with 10% v/v FCS and transferred to a culture
flask (culture area 75 cm
2; Sumitomo Bakelite). After incubating under 5% v/v CO
2 at 37°C for 72 hours, the culture supernatant was recovered, and analysis was performed
on the supernatants to determine what expression products were present.
[0520] Using the above method, but modified as appropriate, COS-1 cells were variously transfected
with each of the following plasmid or plasmid combinations:
(A): no plasmid DNA
(B): cotransfection with pEg7AH-H and p7AL-MM
(C): cotransfection with pEg7AH-H and p7AL-HM
(D): cotransfection with pEg7AH-H and p7AL-HH
EXAMPLE 5
Quantification of Expression Products by ELISA
[0521] Verification and quantitative assay of the expression of humanised antibodies as
expression products in the culture supernatant fluids prepared in Example 4 were performed
by ELISA, using an anti-human IgG antibody.
[0522] Goat anti-human IgG Fc specific polyclonal antibody (Kappel) was dissolved to a final
concentration of 1 µg/ml in adsorption buffer (0.05 M sodium hydrogencarbonate, 0.02%
w/v sodium azide, pH 9.6) and 100 µl aliquots were added to each well of a 96-well
plate (MaxiSorb, Nunc), and the plate was incubated at 37°C for 2 hours to encourage
adsorption of the antibody. Next, each well was washed with 350 µl of PBS-T [PBS(-)
containing 0.05% w/v Tween-20 (BioRad)] four times. After washing, culture supernatant
diluted with α(+)MEM containing 10% v/v FCS was added to the wells, and the plate
was further incubated at 37°C for 2 hours.
[0523] After this time, the wells were again washed four times with PBS-T, and then 100
µl of alkaline phosphatase-labeled goat anti-human IgG Fc specific polyclonal antibody
(Caltag Lab.) diluted 5,000-fold with PBS-T were added to each well and the plate
was incubated at 37°C for 2 hours. Each well was then again washed four times with
PBS-T, and 100 µl of a substrate solution of 1 mg/ml p-nitrophenyl phosphate, prepared
in 10% v/v diethanol amine (pH 9.8), was added to each well. After a subsequent incubation
at 37°C for 0.5 to 1 hour, absorbance at 405 nm was measured.
[0524] In the present experiments, human plasma IgG subclass 1 (IgGl; Biopure AG) diluted
with α(+)MEM containing 10% v/v FCS to certain desired concentrations was used to
provide concentration reference samples of the humanised HFE7A antibodies contained
in the culture supernatant fluids.
[0525] As expected, each supernatants of transformants (B), (C) and (D) was determined to
express human antibody, as detected by anti-human IgG antibody. The negative control,
(A), showed no expression of human antibody.
EXAMPLE 6
Assay for Fas-Binding Activity
[0526] The assay for Fas-binding activity in the cell culture supernatants prepared in Example
4 was performed by ELISA as follows.
[0527] Culture supernatant from COS-1 cells expressing the human Fas fusion protein, as
obtained in Reference Example 1 above, diluted 5-fold with adsorption buffer, was
dispensed into wells of a 96-well plate (MaxiSorb; Nunc) at 50 µl per well and the
plate was incubated at 4°C overnight to allow adsorption of the human Fas fusion protein
to the surface of the wells. Next, each of the wells was washed 4 times with 350 µl
of PBS-T. After washing, PBS-T containing 5% v/v BSA (bovine serum albumin; Wako Pure
Chemical Industries, Ltd.) was added to the wells at 50 µl per well and the plate
was incubated at 37°C for 1 hour to block the remainder of the surface of each well.
The wells were then again washed four times with PBS-T.
[0528] The culture supernatants obtained in Example 4 were adjusted to have a final concentration
of the product of interest of 100 ng/ml in α(+)MEM containing 10% v/v FCS. Concentrations
were estimated by the method described in Example 5. Each of the resulting 100 ng/ml
solutions was then used to produce serial dilutions by serial 2-fold dilution with
α(+)MEM containing 10% v/v FCS. Next, 50 µl of each of the resulting serial dilutions
of each expression product was added to a well prepared as above, and the plate was
incubated at 37°C for 2 hours to allow reaction.
[0529] After this time, the wells were again washed four times with PBS-T, and then 50 µl
of alkaline phosphatase-labeled goat anti-human IgG Fc specific polyclonal antibody
(Caltag Lab.), diluted 10,000-fold with PBS-T, were dispensed into each well and reaction
was allowed to proceed at 37°C for 2 hours.
[0530] HFE7A purified from mouse hybridoma HFE7A was used as a control (IgGl), and was detected
using alkaline phosphatase-labeled goat anti-mouse IgG + IgA + IgM (Gibco BRL), diluted
5,000-fold with PBS-T, in place of the alkaline phosphatase-labeled goat anti-human
IgG Fc specific polyclonal antibody.
[0531] The wells were again washed four times with PBS-T, and then 50 µl of substrate solution
[1 mg/ml p-nitrophenyl phosphate in 10% v/v diethanol amine (pH9.8)] was dispensed
into each well and the plate was incubated at 37°C for 0.5 to 1 hour. Binding activity
of the expression product contained in each culture supernatant fluid with the human
Fas fusion protein was evaluated by reading the absorbance of each well at 405 nm.
[0532] As expected, binding activity to the human Fas fusion protein was demonstrated for
supernatants (B), (C) and (D) above (Figure 28).
EXAMPLE 7
Competitively Inhibiting Binding of HFE7A to Fas
[0533] The humanised anti-Fas antibodies of the Examples should inhibit the binding of HFE7A
to Fas, as the antibodies of the Examples were derived from HFE7A. Therefore, the
ability of the expression products obtained in Example 4 to competitively inhibit
the binding of HFE7A to the human Fas fusion protein was measured.
[0534] One mg of the purified monoclonal antibody HFE7A obtained in Reference Example 3
was labeled using a commercially available alkaline phosphatase labeling kit (Immuno-Link
AP and APL Labeling Kit; Genosis), using the protocol supplied with the kit. The resulting,
labeled antibody is also referred to herein as "AP-HFE7A".
[0535] The COS-1 cell culture supernatant containing the human Fas fusion protein, as obtained
in Reference Example 1, was diluted 5-fold with adsorption buffer, and dispensed into
the wells of a 96-well plate for luminescence detection (Luminescent Solid Assay Plate,
high binding property; Costar) at 50 µl per well. The plate was then incubated at
4°C overnight to allow adsorption of the human Fas fusion protein to the surface of
the wells.
[0536] After this time, each well was washed 4 times with 350 µl of PBS-T, and then 100
µl PBS-T containing 5% v/v BSA was added to each well and the plate was incubated
at 37°C for 1 hour to block the remainder of the surface of each well. The wells were
then again washed four times with PBS-T.
[0537] The culture supernatants obtained in Example 4 were adjusted to final concentrations
of antibody of 1 µg/ml in α(+)MEM containing 10% v/v FCS by the method of Example
5. Each of the resulting solutions of the expression products was used to produce
serial dilutions by serial 2-fold dilution with α(+)MEM containing 10% v/v FCS. AP-HFE7A
was diluted to 50 ng/ml with α(+)MEM containing 10% v/v FCS, and 25 µl of the resulting
solution was mixed with an equal volume of each of the prepared serial dilutions.
[0538] Each of the wells was again washed four times with PBS-T, and then 50 µl of each
of the resulting antibody mixtures were added to individual wells, and the plate was
allowed to stand at at room temperature overnight. Subsequently, after washing each
well with PBS-T again four times, 100 µl of CDP-star buffer (9.58 ml diethanol amine,
0.2 g magnesium chloride, 0.25 g sodium azide, pH8.5) was dispensed into each well
and the plate was allowed to stand at room temperature for 10 minutes. After this
time, the CDP-star buffer was discarded and CDP-star substrate [1.2 ml sapphire II
(Tropix), 200 µl CDP-star (Tropix), q.s. to 12 ml with CDP-star buffer] was added
at 50 µl per well, and the plate was then allowed to stand at room temperature for
a further 40 minutes.
[0539] Competitive inhibition of the expression products of Example 4 of the binding of
HFE7A to the human Fas fusion protein was evaluated by measuring the intensity of
the luminescence with Luminoscan (Titertech).
[0540] As a result, it was verified that the expression products prepared in Example 4 specifically
inhibited the binding of HFE7A to the human Fas fusion protein (Figure 29).
EXAMPLE 8
Apoptosis-Inducing Activity
[0541] WR19L12a cells (
c.f. Itoh, N.
et al., ibid.) were used to examine the apoptosis-inducing activity of the COS-1 cell culture supernatant
of Example 4.
[0542] WR19L12a cells were cultured in RPMI1640 medium with 10% v/v FCS (Gibco BRL) at 37°C
for 3 days under 5% v/v CO
2, and 50 µl (1 x 10
5 cells) of the resulting culture were then dispensed into each well of a 96-well microplate
(Sumitomo Bakelite). The culture supernatants obtained in Example 4 were adjusted
to a final concentration of antibody of 100 ng/ml in RPMI1640 medium containing 10%
v/v FCS. Concentrations were estimated by the method of Example 5. Each of the adjusted
solutions of the expression products was used to produce serial dilutions by serial
2-fold dilution with RPMI1640 containing 10% v/v FCS. Each of the resulting dilutions
of each expression product solution was added to individual wells, at 50 µl per well,
and the plate was incubated at 37°C for 1 hour. After this time, the cells in each
well were washed four times with RPMI1640 containing 10% v/v FCS and then the washed
cells were suspended in 75 µl per well of RPMI1640 containing 10% v/v FCS.
[0543] Subsequently, 75 µl of 1.25 µg/ml goat anti-human IgG Fc specific polyclonal antibody
(Kappel) in RPMI 1640 medium containing 10% v/v FCS was added to each well, as secondary
antibody. The plate was allowed to stand at 37°C for 12 hours, and then 50 µl of 25
µM PMS (phenazine methosulphate; Sigma Chemical Co.), containing 1 mg/ml XTT [2,3-bis(2-methoxy-4-nitro-5-sulphophenyl)
-2
H-tetrazolium-5-carboxyanilide inner salt; Sigma Chemical Co.] to final concentrations
of 250 µg/ml for XTT and 5 µM for PMS, were added to each well. The plate was then
incubated for 3 hours at 37°C, and the absorbance at 450 nm of each well was measured,
to calculate cell viability, using the reducing power of the mitochondria as the index.
[0544] The viability of the cells in each well was calculated according to the following
formula:
Viability (%) = 100 x (a-b) / (c-b)
wherein "a" is the absorbance of a test well, "b" is the absorbance of a well with
no cells, and "c" is the absorbance of a well with no antibody added.
[0545] As expected, each of the expression products (B), (C) and (D) of Example 4, were
demonstrated to induce apoptosis in T cells expressing the human Fas antigen (Figure
30).
EXAMPLE 9
Preparation of DNA Encoding Humanised Light Chain
(1) Construction of vectors for the light chains of humanised versions of HFE7A antibody
[0546] In order to humanise the amino acid sequence of the light chain of the mouse anti-human
Fas antibody HFE7A, the 1st amino acid (aspartic acid), the 85th amino acid (alanine)
and the 107th amino acid (arginine) from the N-terminus of the amino acid sequence
of the HH type light chain were replaced with glutamic acid, glutamic acid and lysine,
respectively. These replacement residues are conserved in the human light chain (κ
chain). The resulting sequence was designated as "PDHH type." For the HM light chain
sequence, the 1st amino acid (aspartic acid) and the 107th amino acid (arginine) from
the N-terminus of the amino acid sequence were replaced with the conserved glutamic
acid and lysine residues, respectively. The resulting sequence was designated as "PDHM
type."
[0547] Expression plasmids separately carrying these 2 types of humanised light chain amino
acid sequences (PDHH and PFHM) were constructed as follows.
1) Synthesis of primers for preparing the variable and constant regions of the light
chain of humanised HFE7A
[0548] DNA (SEQ ID No. 106 of the Sequence Listing) encoding the PDHH type polypeptide chain
(SEQ ID No. 107 of the Sequence Listing) and DNA (SEQ ID No. 108 of the Sequence Listing)
encoding the PDHM type polypeptide chain (SEQ ID No. 109 of the Sequence Listing)
were prepared by PCR. Each of these sequences is a fusion of one the humanised versions
of the variable region of the HFE7A light chain with the constant region of the human
Ig light chain (κ chain).
[0549] 7AL1P (SEQ ID No. 55) and 7ALCN (SEQ ID No. 64) had already been synthesised [Example
2 (2) 2) above], and the following oligonucleotide primers were also synthesised for
PCR:


2) Construction of plasmid pLPDHH75 (expression plasmid for humanised PDHH type HFE7A
light chain)
[0550] LPDHH-DNA (light chain constant region fused with PDHH DNA), as defined in SEQ ID
No. 106 of the Sequence Listing, and encoding the amino acid sequence of SEQ ID No.
107 of the Sequence Listing, was prepared by performing 3-stage PCR, inserted into
a plasmid vector, and cloned into
E. coli.
a) First stage PCR
[0551] The outline of the first stage PCR for the preparation of LPDHH-DNA is shown in Figure
31.
[0552] The LPD1-DNA fragment, encoding a secretion signal sequence and a portion of FRL
1, but having an added HindIII restriction enzyme cleavage site at the 5'-end, was
prepared as follows.
Composition of the PCR reaction solution: |
plasmid pHSGHH7 DNA, 200 ng; |
oligonucleotide primer 7AL1P, 80 pmol; |
oligonucleotide primer LPD1N, 80 pmol; |
dNTP cocktail, 20 µl; |
10× Pfu buffer, 20 µl; |
Pfu DNA polymerase (Stratagene), 10 units; and |
redistilled water to a final volume of 200 µl. |
[0553] The PCR reaction was conducted as follows. The solution was first heated at 94°C
for 2 minutes, after which a cycle of heating to 94°C for 1 minute, 55°C for 1 minute
and 72°C for 2 minutes, was repeated 30 times. After completion of this procedure,
the reaction solution was heated at 72°C for 10 minutes.
[0554] The LPDHH1-DNA fragment, encoding a portion of FRL
1, CDRL
1, FRL
2, CDRL
2 and a portion of the FRL
3 region, was prepared as follows.
Composition of the PCR reaction solution: |
plasmid pHSGHH7 DNA, 200 ng; |
oligonucleotide primer LPD1P, 80 pmol; |
oligonucleotide primer LPD2N, 80 pmol; |
dNTP cocktail, 20 µl; |
10× Pfu buffer, 20 µl; |
Pfu DNA polymerase, 10 units; and |
redistilled water to a final volume of 200 µl. |
[0555] The PCR reaction was conducted as follows. The solution was first heated at 94°C
for 2 minutes, after which a cycle of heating to 94°C for 1 minute, 55°C for 1 minute
and 72°C for 2 minutes, was repeated 30 times. After completion of this procedure,
the reaction solution was heated at 72°C for 10 minutes.
[0556] The LPDHH2-DNA fragment, encoding a portion of FRL
3, CDRL
3 and FRL
4, was prepared as follows.
Composition of the PCR reaction solution: |
plasmid pHSGHH7 DNA, 200 ng; |
oligonucleotide primer LPD2P, 80 pmol; |
oligonucleotide primer LPD3N, 80 pmol; |
dNTP cocktail, 20 µl; |
10× Pfu buffer, 20 µl; |
Pfu DNA polymerase, 10 units; and |
redistilled water to a final volume of 200 µl. |
[0557] The PCR reaction was conducted as follows. The solution was first heated at 94°C
for 2 minutes, after which a cycle of heating to 94°C for 1 minute, 55°C for 1 minute
and 72°C for 2 minutes, was repeated 30 times. After completion of this procedure,
the reaction solution was heated at 72°C for 10 minutes.
[0558] The LPDC-DNA fragment, encoding a portion of FRL
4 and the HFE7A light chain constant region, but having an EcoRI restriction enzyme
cleavage site added at the 3'-end, was prepared as follows.
Composition of the PCR reaction solution: |
plasmid pHSGHH7 DNA, 200 ng; |
oligonucleotide primer LPD3P, 80 pmol; |
oligonucleotide primer 7ALCN, 80 pmol; |
dNTP cocktail, 20 µl; |
10× Pfu buffer, 20 µl; |
Pfu DNA polymerase, 10 units; and |
redistilled water to a final volume of 200 µl. |
[0559] The PCR reaction was conducted as follows. The solution was first heated at 94°C
for 2 minutes, after which a cycle of heating to 94°C for 1 minute, 55°C for 1 minute
and 72°C for 2 minutes, was repeated 30 times. After completion of this procedure,
the reaction solution was heated at 72°C for 10 minutes.
[0560] After PCR, the amplified DNA fragments were subjected first to phenol extraction
and then to ethanol precipitation, and then separated by 5% w/v polyacrylamide gel
electrophoresis. After electrophoresis, the gel was stained with 1 µg/ml of ethidium
bromide, and the DNA bands thus detected, under UV light, were cut out with a razor
blade and eluted from the gel using a Centriruter and a Centricon-10, as described
above. The eluted DNA was concentrated by centrifugation at 7,500 x g, followed by
ethanol precipitation, and was finally dissolved in 50 µl of distilled water.
b) Second stage PCR
[0561] The outline of the second stage PCR for the production of LPDHH-DNA is shown in Figure
32.
[0562] LPDHH1.2-DNA, in which the above described LPD1-DNA, LPDHH1-DNA and LPDHH2-DNA fragments
are fused, was prepared as follows.
Composition of the PCR reaction solution: |
LPD1-DNA solution (from the first stage PCR), 10 µl; |
LPDHH1-DNA solution (from the first stage PCR), 10 µl; |
LPDHH2-DNA solution (from the first stage PCR), 10 µl; |
oligonucleotide primer 7AL1P, 80 pmol; |
oligonucleotide primer LPD3N, 80 pmol; |
dNTP cocktail, 20 µl; |
10× Pfu buffer, 20 µl; |
Pfu DNA polymerase, 10 units; and |
redistilled water to a final volume of 200 µl. |
[0563] The PCR reaction was conducted as follows. The solution was first heated at 94°C
for 2 minutes, after which a cycle of heating to 94°C for 1 minute, 55°C for 1 minute
and 72°C for 2 minutes, was repeated 30 times. After completion of this procedure,
the reaction solution was heated at 72°C for 10 minutes.
[0564] After PCR, the amplified LPDHH1.2 fragment was subjected first to phenol extraction
and then to ethanol precipitation, and then separated by 5% w/v polyacrylamide gel
electrophoresis. After electrophoresis, the gel was stained with 1 µg/ml of ethidium
bromide, and the fusion DNA band thus detected, under UV light, was cut out with a
razor blade and eluted from the gel using a Centriruter and a Centricon-10, as described
above. The eluted DNA was concentrated by centrifugation at 7,500 x g, followed by
ethanol precipitation, and was finally dissolved in 50 µl of distilled water.
c) Third stage PCR
[0565] The outline of the third stage PCR for the production of LPDHH-DNA is shown in Figure
33.
[0566] The LPDHH-DNA fragment, in which the above described LPDHH1.2-DNA and LPDC-DNA fragments
were fused, was prepared as follows.
Composition of the PCR reaction solution: |
LPDHH1.2-DNA solution (from second stage PCR), 10 µl; |
LPDC-DNA solution (from first stage PCR), 10 µl; |
oligonucleotide primer 7AL1P, 80 pmol; |
oligonucleotide primer 7ALCN, 80 pmol; |
dNTP cocktail, 20 µl; |
10× Pfu buffer, 20 µl; |
Pfu DNA polymerase, 10 units; and |
redistilled water to a final volume of 200 µl. |
[0567] The PCR reaction was conducted as follows. The solution was first heated at 94°C
for 2 minutes, after which a cycle of heating to 94°C for 1 minute, 55°C for 1 minute
and 72°C for 2 minutes, was repeated 30 times. After completion of this procedure,
the reaction solution was heated at 72°C for 10 minutes.
[0568] After PCR, the amplified LPDHH-DNA fragment was subjected first to phenol extraction
and then to ethanol precipitation, and then separated by 5% w/v polyacrylamide gel
electrophoresis. After electrophoresis, the gel was stained with 1 µg/ml of ethidium
bromide, and the DNA band thus detected, under UV light, was cut out with a razor
blade and eluted from the gel using a Centriruter and a Centricon-10, as described
above. The eluted DNA was concentrated by centrifugation at 7,500 x g, followed by
ethanol precipitation, and was finally dissolved in 50 µl of distilled water.
[0569] Construction of an expression plasmid carrying the LPDHH-DNA fragment is outlined
in Figure 34.
[0570] The LPDHH-DNA fragment, obtained above, was further purified by phenol extraction
followed by ethanol precipitation, and then digested with the restriction enzymes
HindIII and EcoRI.
[0571] One µg of the cloning plasmid pHSG399 DNA was digested with the restriction enzymes
HindIII and EcoRI, and then dephosphorylated with CIP. The resulting dephosphorylated
pHSG399 DNA was then ligated with the LPDHH-DNA fragment, which had previously also
been digested with HindIII and EcoRI, using a DNA Ligation Kit Version 2.0 (Takara
Shuzo, Co. Ltd.).
E. coli JM109 was then transformed with the ligation mix and plated onto LB agar medium containing
final concentrations of 1 mM IPTG, 0.1% w/v X-Gal and 50 µg/ml chloramphenicol. Any
white transformants obtained were cultured in 2 ml liquid LB medium containing 50
µg/ml chloramphenicol at 37°C overnight, and plasmid DNA was extracted from the resulting
culture by the alkaline-SDS method. The extracted plasmid DNA was digested with HindIII
and EcoRI, and a clone carrying the LPDHH-DNA fragment was then selected by 1% w/v
agarose gel electrophoresis.
[0572] Accordingly, plasmid pHSHH5, carrying a fusion insert comprising the variable region
of the humanised LPDHH DNA and DNA encoding the constant region of human immunoglobulin
K chain, was isolated. The transformant
E. coli pHSHH5 SANK 70398, harboring plasmid pHSHH5, was deposited with the Kogyo Gijutsuin
Seimei-Kogaku Kogyo Gijutsu Kenkyujo on February 26, 1998, in accordance with the
Budapest Treaty on the Deposit of Microorganisms, and was accorded the accession number
FERM BP-6274.
[0573] The expression vector plasmid pLPDHH75 carrying the DNA fragment of SEQ ID No. 106
of the Sequence Listing, encoding the humanised PDHH type HFE7A light chain polypeptide
of SEQ ID No. 107 of the Sequence Listing, was then prepared using the plasmid pHSHH5.
[0574] One µg of pEE.12.1 DNA (Lonza), an expression vector for mammalian cells, was digested
with the restriction enzymes HindIII and EcoRI, and then dephosphorylated using CIP.
The resulting digested, dephosphorylated plasmid DNA (100 ng) was ligated with 10
µg of the pHSHH5 DNA fragment which had also been digested with Hind III and EcoRI,
using a DNA Ligation Kit Version 2.0 (Takara Shuzo Co., Ltd.). The ligation mix was
then used to transform
E. coli JM109 (as described above), which was then plated on LB agar plates containing 50
µg/ml ampicillin.
[0575] The transformants obtained by this method were cultured in 2 ml of liquid LB medium
containing 50 µg/ml ampicillin at 37°C overnight, and plasmid DNA was subsequently
extracted from the resulting culture by the alkaline-SDS method.
[0576] The extracted plasmid DNA was digested with HindIII and EcoRI, and subjected to 1%
w/v agarose gel electrophoresis to confirm the presence or absence of the insert of
interest. This enabled the isolation of the plasmid pLPDHH75, which contains a fusion
fragment having the variable region of the humanised PDHH type HFE7A light chain together
with DNA encoding the constant region of the human immunoglobulin κ chain. The fusion
fragment was found to be located downstream of the cytomegalovirus (CMV) promoter
in the correct orientation.
3) Construction of plasmid pLPDHM32 (expression plasmid for humanised PDHM type HFE7A
light chain)
[0577] The LPDHM-DNA fragment (SEQ ID No. 108 of the Sequence Listing, encoding the amino
acid sequence of SEQ ID No. 109 thereof) was produced by performing 3-stage PCR, the
fragment then being inserted into a plasmid vector and cloned into
E. coli.
a) First stage PCR
[0578] The outline of the first stage PCR for the preparation of LPDHM-DNA is shown in Figure
35.
[0579] The LPD1-DNA fragment, encoding a secretion signal sequence and a portion of FRL
1 having a HindIII restriction enzyme cleavage site added at the 5'-end, and the LPDC-DNA
fragment, encoding a portion of FRL
4 and the constant region having an EcoRI restriction enzyme cleavage site added at
the 3'-end, were those obtained in the preparation of the LPDHH-DNA fragment [see
"2) Construction of plasmid pLPDHH75 (expression plasmid for humanised PDHH type HFE7A
light chain)" and "a) First Stage PCR"].
[0580] The LPDHM1-DNA fragment, encoding a portion of CDRL
1, FRL
2, CDRL
2, FRL
3, CDRL3 and FRL
4, was prepared as follows.
Composition of the PCR reaction solution: |
plasmid pHSGHM17 DNA, 200 ng; |
oligonucleotide primer LPD1P, 80 pmol; |
oligonucleotide primer LPD3N, 80 pmol; |
dNTP cocktail, 20 µl; |
10× Pfu buffer, 20 µl; |
Pfu DNA polymerase, 10 units; and |
redistilled water to a final volume of 200 µl. |
[0581] The PCR reaction was conducted as follows. The solution was first heated at 94°C
for 2 minutes, after which a cycle of heating to 94°C for 1 minute, 55°C for 1 minute
and 72°C for 2 minutes, was repeated 30 times. After completion of this procedure,
the reaction solution was heated at 72°C for 10 minutes.
[0582] After PCR, the amplified LPD1, LPDHM1 and LPDC-DNA fragments were subjected first
to phenol extraction and then to ethanol precipitation, and then separated by 5% w/v
polyacrylamide gel electrophoresis. After electrophoresis, the gel was stained with
1 µg/ml of ethidium bromide, and the fusion DNA bands thus detected, under UV light,
were cut out with a razor blade and eluted from the gel using a Centriruter and a
Centricon-10, as described above. The eluted DNA was concentrated by centrifugation
at 7,500 x g, followed by ethanol precipitation, and was finally dissolved in 50 µl
of distilled water.
b) Second stage PCR
[0583] The outline of the second stage PCR for the production of PDHM-DNA is shown in Figure
36.
[0584] LPDHM1.2-DNA, in which the above LPD1-DNA and LPDHM1-DNA fragments were fused, was
prepared as follows.
Composition of the PCR reaction solution: |
LPD1-DNA solution (from the first stage PCR), 10 µl; |
LPDHM1-DNA solution (from the first stage PCR), 10 µl; |
oligonucleotide primer 7AL1P, 80 pmol; |
oligonucleotide primer LPD3N, 80 pmol; |
dNTP cocktail, 20 µl; |
10× Pfu buffer, 20 µl; |
Pfu DNA polymerase, 10 units; and |
redistilled water to a final volume of 200 µl. |
[0585] The PCR reaction was conducted as follows. The solution was first heated at 94°C
for 2 minutes, after which a cycle of heating to 94°C for 1 minute, 55°C for 1 minute
and 72°C for 2 minutes, was repeated 30 times. After completion of this procedure,
the reaction solution was heated at 72°C for 10 minutes.
[0586] After PCR, the amplified LPDHM1.2-DNA fragment was subjected first to phenol extraction
and then to ethanol precipitation, and then separated by 5% w/v polyacrylamide gel
electrophoresis. After electrophoresis, the gel was stained with 1 µg/ml of ethidium
bromide, and the DNA band thus detected, under UV light, was cut out with a razor
blade and eluted from the gel using a Centriruter and a Centricon-10, as described
above. The eluted DNA was concentrated by centrifugation at 7,500 x g, followed by
ethanol precipitation, and was finally dissolved in 50 µl of distilled water.
c) Third stage PCR
[0587] The outline of the third stage PCR for the preparation of LPDHM-DNA is shown in Figure
37.
[0588] The LPDHM-DNA fragment, comprising a fusion of the LPDHM1.2-DNA and LPDC-DNA fragments
above, was prepared as follows.
Composition of the PCR reaction solution: |
LPDHM1.2-DNA solution (from the second stage PCR), 10 µl; |
LPDC-DNA solution (from the first stage PCR), 10 µl; |
oligonucleotide primer 7AL1P, 80 pmol; |
oligonucleotide primer 7ALCN, 80 pmol; |
dNTP cocktail, 20 µl; |
10× Pfu buffer, 20 µl; |
Pfu DNA polymerase, 10 units; and |
redistilled water to a final volume of 200 µl. |
[0589] The PCR reaction was conducted as follows. The solution was first heated at 94°C
for 2 minutes, after which a cycle of heating to 94°C for 1 minute, 55°C for 1 minute
and 72°C for 2 minutes, was repeated 30 times. After completion of this procedure,
the reaction solution was heated at 72°C for 10 minutes.
[0590] After PCR, the amplified LPDHM-DNA fragment was subjected first to phenol extraction
and then to ethanol precipitation, and then separated by 5% w/v polyacrylamide gel
electrophoresis. After electrophoresis, the gel was stained with 1 µg/ml of ethidium
bromide, and the DNA band thus detected, under UV light, was cut out with a razor
blade and eluted from the gel using a Centriruter and a Centricon-10, as described
above. The eluted DNA was concentrated by centrifugation at 7,500 x g, followed by
ethanol precipitation, and was finally dissolved in 50 µl of distilled water.
[0591] The construction of a plasmid carrying the LPDHM-DNA fragment is outlined in Figure
38.
[0592] The LPDHM-DNA obtained above was further purified by phenol extraction followed by
ethanol precipitation, and then digested with the restriction enzymes HindIII and
EcoRI.
[0593] One µg of the cloning plasmid pHSG399 DNA was digested with the restriction enzymes
HindIII and EcoRI, and then dephosphorylated with CIP. The resulting dephosphorylated
pHSG399 DNA and was then ligated with the LPDHM-DNA fragment, which had previously
also been digested with HindIII and EcoRI, using a DNA Ligation Kit Version 2.0 (Takara
Shuzo, Co. Ltd.).
E. coli JM109 was then transformed with the ligation mix and plated onto LB agar medium containing
final concentrations of 1 mM IPTG, 0.1% w/v X-Gal and 50 µg/ml chloramphenicol. Any
white transformants obtained were cultured in 2 ml liquid LB medium containing 50
µg/ml chloramphenicol at 37°C overnight, and plasmid DNA was extracted from the resulting
culture by the alkaline-SDS method. The extracted plasmid DNA was digested with HindIII
and EcoRI, and a clone carrying the LPDHM-DNA fragment was then selected by 1% w/v
agarose gel electrophoresis.
[0594] As a result of the above procedure, plasmid pHSHM2 carrying a fusion insert comprising
the variable region of the humanised PDMM type HFE7A light chain and DNA encoding
the constant region of the human Ig κ chain, was obtained. The transformant
E. coli pHSHM2 SANK 70198, harboring plasmid pHSHM2, was deposited with the Kogyo Gijutsuin
Seimei-Kogaku Kogyo Gijutsu Kenkyujo on February 26, 1998, in accordance with the
Budapest Treaty on the Deposit of Microorganisms, and was accorded the accession number
FERM BP-6272.
[0595] The expression vector plasmid pLPDHM32 was constructed, carrying the DNA of SEQ ID
No. 108 of the Sequence Listing encoding the humanised PDHM type HFE7A light chain
polypeptide of SEQ ID No. 109, using plasmid pHSHM2 obtained above.
[0596] One µg of pEE.12.1 DNA (Lonza), an expression vector for mammalian cells, was digested
with the restriction enzymes Hind III and EcoRI, and then dephosphorylated using CIP.
The resulting digested, dephosphorylated plasmid DNA (100 ng) was ligated with 10
µg of the pHSHM2 DNA fragment which had also been digested with Hind III and EcoRI,
using a DNA Ligation Kit Version 2.0 (Takara Shuzo Co., Ltd.). The ligation mix was
then used to transform
E. coli JM109 (as described above), which was then plated on LB agar plates containing 50
µg/ml ampicillin.
[0597] The transformants obtained by this method were cultured in 2 ml of liquid LB medium
containing 50 µg/ml ampicillin at 37°C overnight, and plasmid DNA was subsequently
extracted from the resulting culture by the alkaline-SDS method.
[0598] The extracted plasmid DNA was digested with HindIII and EcoRI, and subjected to 1%
w/v agarose gel electrophoresis to confirm the presence or absence of the insert of
interest. This enabled the isolation of the plasmid pLPDHM32, which contains a fusion
fragment having the variable region of the humanised PDHM type HFE7A light chain together
with DNA encoding the constant region of the human immunoglobulin κ chain. The fusion
fragment was found to be located downstream of the cytomegalovirus (CMV) promoter
in the correct orientation.
(4) Verification of nucleotide sequences
[0599] To verify that the DNA inserts of plasmids pLPDHH75 and pLPDHM32 have the desired
nucleotide sequences, the DNA inserts were analyzed to determine their nucleotide
sequences. The oligonucleotide primers used for nucleotide sequencing were SP1 (SEQ
ID No. 68), SP2 (SEQ ID No. 69), SP3 (SEQ ID No. 70), SP4 (SEQ ID No. 71), SP5 (SEQ
ID No. 72) and SP6 (SEQ ID No. 73).
[0600] The positions to which each primer binds are shown in Figure 19. The determination
of the nucleotide sequence was performed by the dideoxynucleotide chain termination
method using, as the templates, the plasmid containing the sequence to be confirmed,
the plasmid having been purified by the alkaline-SDS method and the caesium chloride
method. As expected pLPDHH75 was confirmed to have the nucleotide sequence of SEQ
ID No. 106 of the Sequence Listing, encoding the polypeptide of SEQ ID No. 107, and
that pLPDHM32 had the nucleotide sequence of SEQ ID No. 108 of the Sequence Listing,
encoding the polypeptide of SEQ ID No. 109.
EXAMPLE 10
Preparation of DNA Encoding Humanised Heavy Chain
(1) Construction of vector for the heavy chain of humanised version of HFE7A antibody
[0601] In further humanising the amino acid sequence of SEQ ID No. 75 of the Sequence Listing
(the humanised heavy chain of the mouse anti-human Fas antibody HFE7A), the 44th amino
acid (arginine) and the 76th amino acid (alanine) in the amino acid sequence of SEQ
ID No. 75 were replaced with glycine and threonine, respectively, these residues being
conserved in the human heavy chain. The resulting sequence was designated as the "HV
type."
[0602] Expression plasmids carrying the HV type humanised heavy chain amino acid sequences
of the anti-human Fas antibody HFE7A were constructed as follows.
(1) Synthesis of primers for preparing the variable region of the humanised heavy chain
[0603] The synthesis of DNA (SEQ ID No. 116 of the Sequence Listing) encoding the humanised
anti-Fas antibody HFE7A heavy chain (SEQ ID No. 117 of the Sequence Listing) was performed
by using a combination of PCR steps.
[0604] In addition to 7AH1P (SEQ ID No: 76 above), the following 3 primers were synthesised
for PCR:

2) Construction of plasmid pgHPDHV3
[0605] The HPD1.2-DNA fragment, encoding amino acid No's -19-+84 of SEQ ID No. 117 of the
Sequence Listing, was prepared by performing 2-stage PCR, inserted into a plasmid
and then cloned into
E. coli.
a) First stage PCR
[0606] The outline of the first stage PCR for the preparation of HPD1.2-DNA is shown in
Figure 39.
[0607] The HPD1-DNA fragment, encoding a secretion signal sequence and FRH
1, CDRH
1 and a portion of FRH
2 with an added HindIII restriction enzyme cleavage site added at the 5'-end, was prepared
as follows.
Composition of the PCR reaction solution: |
plasmid pgHSL7A62 DNA, 200 ng; |
oligonucleotide primer 7AH1P, 80 pmol; |
oligonucleotide primer HPD1N, 80 pmol; |
dNTP cocktail, 20 µl; |
10× Pfu buffer, 20 µl; |
Pfu DNA polymerase, 10 units; and |
redistilled water to a final volume of 200 µl. |
[0608] The PCR reaction was conducted as follows. The solution was first heated at 94°C
for 2 minutes, after which a cycle of heating to 94°C for 1 minute, 55°C for 1 minute
and 72°C for 2 minutes, was repeated 30 times. After completion of this procedure,
the reaction solution was heated at 72°C for 10 minutes.
[0609] The HPD2-DNA fragment, encoding a portion of FRH
2, CDRH
3, and a portion of FRH
3, was prepared as follows.
Composition of the PCR reaction solution: |
plasmid pgHSL7A62 DNA, 200 ng; |
oligonucleotide primer HPD1P, 80 pmol; |
oligonucleotide primer HPD2N, 80 pmol; |
dNTP cocktail, 20 µl; |
10× Pfu buffer, 20 µl; |
Pfu DNA polymerase, 10 units; and |
redistilled water to a final volume of 200 µl. |
[0610] The PCR reaction was conducted as follows. The solution was first heated at 94°C
for 2 minutes, after which a cycle of heating to 94°C for 1 minute, 55°C for 1 minute
and 72°C for 2 minutes, was repeated 30 times. After completion of this procedure,
the reaction solution was heated at 72°C for 10 minutes.
[0611] After PCR, the amplified HPD1 and HPD2 DNA fragments were subjected first to phenol
extraction and then to ethanol precipitation, and then separated by 5% w/v polyacrylamide
gel electrophoresis. After electrophoresis, the gel was stained with 1 µg/ml of ethidium
bromide, and the DNA bands thus detected, under UV light, were cut out with a razor
blade and eluted from the gel using a Centriruter and a Centricon-10, as described
above. The eluted DNA was concentrated by centrifugation at 7,500 x g, followed by
ethanol precipitation, and was finally dissolved in 50 µl of distilled water.
b) Second stage PCR
[0612] The outline of the second stage PCR for the preparation of HPD1.2-DNA is shown in
Figure 40.
[0613] The HPD1.2-DNA fragment, in which above described HPD1-DNA and HPD2-DNA fragments
are fused, was prepared as follows.
Composition of the PCR reaction solution: |
HPD1-DNA solution (from the first stage PCR), 10 µl; |
HPD2-DNA solution (from the first stage PCR), 10 µl; |
oligonucleotide primer 7AH1P, 80 pmol; |
oligonucleotide primer HPD2N, 80 pmol; |
dNTP cocktail, 20 µl; |
10× Pfu buffer, 20 µl; |
Pfu DNA polymerase, 10 units; and |
redistilled water to a final volume of 200 µl. |
[0614] The PCR reaction was conducted as follows. The solution was first heated at 94°C
for 2 minutes, after which a cycle of heating to 94°C for 1 minute, 55°C for 1 minute
and 72°C for 2 minutes, was repeated 30 times. After completion of this procedure,
the reaction solution was heated at 72°C for 10 minutes.
[0615] After PCR, the amplified HPD1.2 DNA fragment was subjected first to phenol extraction
and then to ethanol precipitation, and then separated by 5% w/v polyacrylamide gel
electrophoresis. After electrophoresis, the gel was stained with 1 µg/ml of ethidium
bromide, and the DNA band thus detected, under UV light, was cut out with a razor
blade and eluted from the gel using a Centriruter and a Centricon-10, as described
above. The eluted DNA was concentrated by centrifugation at 7,500 x g, followed by
ethanol precipitation, and was finally dissolved in 50 µl of distilled water.
[0616] The construction of a plasmid carrying HPD1.2-DNA fragment is outlined in Figure
41.
[0617] The HPD1.2-DNA fragment obtained above was further purified by phenol extraction
followed by ethanol precipitation, and then digested with the restriction enzymes
HindIII and SacI.
[0618] Next, 10 µg of the plasmid pgHSL7A62 DNA was digested with the restriction enzymes
HindIII and SacI and dephosphorylated with CIP. The resulting dephosphorylated pgHSL7A62
DNA (100 ng), was ligated with 10 µg of HPD1.2-DNA, which had previously been digested
with HindIII and SacI, using a DNA Ligation Kit Version 2.0 (Takara Shuzo, Co. Ltd.)
and the ligation mix was cloned into
E. coli JM109. Any resulting transformants were cultured in 2 ml liquid LB medium, containing
50 µg/ml chloramphenicol at 37°C overnight, and plasmid DNA was extracted from the
culture by the alkaline-SDS method.
[0619] The extracted plasmid was then digested with HindIII and SacI, in order to confirm
the presence or absence of the insert of interest by 1% w/v agarose gel electrophoresis.
Thus, the plasmid pgHPDHV3, carrying a fusion insert comprising the DNA fragment encoding
the variable region of the humanised HV type HFE7A heavy chain and a genomic DNA fragment
encoding the constant region of human IgG1 heavy chain, was obtained. The transformant
E. coli pgHPDHV3 SANK 70298, harboring plasmid pgHPDHV3, was deposited with the Kogyo Gijutsuin
Seimei-Kogaku Kogyo Gijutsu Kenkyujo on February 26, 1998, in accordance with the
Budapest Treaty on the Deposit of Microorganisms, and was accorded the accession number
FERM BP-6273.
[0620] Ten microgrammes of the thus obtained plasmid pgHPDHV3 DNA was digested with the
restriction enzymes HindIII and EcoRI. In parallel, 1 µg of the mammalian expression
plasmid pEE.6.1 DNA was digested with HindIII and EcoRI, and then dephosphorylated
with CIP. The resulting dephosphorylated pEE.6.1 DNA (100 ng) was ligated with 10
µg of digested pgHPDHV3 DNA using a ligation kit Version 2.0 (Takara Shuzo, Co. Ltd.),
and cloned into
E. coli JM109. Any resulting transformants were cultured in 2 ml liquid LB medium containing
50 µg/ml ampicillin at 37°C overnight, and plasmid DNA was extracted from the culture
by the alkaline-SDS method. The plasmid was digested with HindIII and EcoRI, to confirm
the presence or absence of the insert of interest by 1% w/v agarose gel electrophoresis.
Thus, the plasmid pEgPDHV3-21, containing a fusion insert comprising the DNA fragment
encoding the variable region of the humanised HV type HFE7A heavy chain and a genomic
DNA fragment encoding the constant region of human IgGl heavy chain downstream of
CMV promoter, and in the correct orientation, was obtained.
(3) Verification of nucleotide sequence
[0621] To verify that the DNA insert of the plasmid pEgPDHV3-21 had the desired nucleotide
sequence, the DNA insert was analyzed to determine the nucleotide sequence. For this
sequencing, the primers PEEF (SEQ ID No. 104), HPD1P (SEQ ID No. 1118), HPD1N (SEQ
ID No. 119) and HPD2N (SEQ ID No. 120) were used.
[0622] The positions, to which the primers bind, are shown in Figure 42. Determination of
nucleotide sequences was performed by the dideoxynucleotide chain termination method
using, as templates, the plasmids, purified by the alkaline-SDS method and the caesium
chloride method, containing the sequences for confirmation.
[0623] As expected, it was verified that pEgPDHV3-21 had the nucleotide sequence of SEQ
ID No. 116 of the Sequence Listing, encoding the polypeptide of SEQ ID No. 117.
EXAMPLE 11
Construction of High-Level Expression Vectors Optimised for CDS-1 Cells
[0624] High-level expression vectors, optimised for COS-1 cells, were constructed, using
the above described vectors p7AL-HH, p7AL-HM, p7AL-MM, pLPDHH75, pLPDHM32, pEg7AH-H
and pEgPDHV3-21.
(1) High-level expression vectors for humanised light chains
[0625] The construction of high-level expression vectors for the humanised light chains
is outlined in Figure 43.
1) Synthesis of primers for preparing the SR α promoter DNA fragment
[0626] The SR α promoter DNA fragment, for insertion into the expression vectors for humanised
light chains, was synthesised using PCR.
[0627] The following 2 oligonucleotide primers were synthesised for PCR:

2) Construction of plasmids
[0628] After synthesis, the SR α promoter DNA fragment was inserted into the vectors p7AL-HH,
p7AL-HM, p7AL-MM, pLPDHH75 or pLPDHM32 and then cloned into
E. coli.
[0629] An LSR α-DNA fragment, comprising the SR α promoter with a MulI restriction enzyme
cleavage site added at the 5'-end and a HindIII restriction enzyme cleavage site added
at the 3'-end, was prepared as follows.
Composition of the PCR reaction solution: |
plasmid pME18S DNA, 200 ng; |
oligonucleotide primer MLUA, 80 pmol; |
oligonucleotide primer HINDB, 80 pmol; |
dNTP cocktail, 20 µl; |
10× Pfu buffer, 20 µl; |
Pfu DNA polymerase, 10 units; and |
redistilled water to a final volume of 200 µl. |
[0630] The PCR reaction was conducted as follows. The solution was first heated at 94°C
for 2 minutes, after which a cycle of heating to 94°C for 1 minute, 55°C for 1 minute
and 72°C for 2 minutes, was repeated 30 times. After completion of this procedure,
the reaction solution was heated at 72°C for 10 minutes.
[0631] After PCR, the amplified LSR α-DNA fragment was subjected first to phenol extraction
and then to ethanol precipitation, and then separated by 5% w/v polyacrylamide gel
electrophoresis. After electrophoresis, the gel was stained with 1 µg/ml of ethidium
bromide, and the DNA band thus detected, under UV light, was cut out with a razor
blade and eluted from the gel using a Centriruter and a Centricon-10, as described
above. The eluted DNA was concentrated by centrifugation at 7,500 x g, followed by
ethanol precipitation, and was finally dissolved in 50 µl of distilled water.
[0632] One µg of plasmid p7AL-HH, p7AL-HM, p7AL-MM, pLPDHH75 or pLPDHM32 DNA was digested
with the restriction enzymes MulI and HindIII, and then dephosphorylated with CIP.
The resulting dephosphorylated plasmid DNA (100 ng) was ligated with 10 µl of the
solution containing the LSR α-DNA fragment, which had previously been digested with
MulI and HindIII, using a DNA Ligation Kit Version 2.0 (Takara Shuzo, Co. Ltd.).
E. coli JM109 was then transformed with the ligation mix and plated onto LB agar medium containing
50 µg/ml ampicillin. The transformants obtained were cultured in 2 ml liquid LB medium
containing 50 µg/ml ampicillin at 37°C overnight, and plasmid DNA was extracted from
the resulting culture by the alkaline-SDS method. The extracted plasmid DNA was digested
with MulI and HindIII, and a clone carrying LSR α-DNA fragment was selected by 1%
w/v agarose gel electrophoresis.
[0633] Following the above procedure, the high-level expression vector plasmids pSRHH (HH
type), pSRHM (HM type), pSRMM (MM type), pSRPDHH (PDHH type) and pSRPDHM (PDHM type),
were obtained.
(2) High-level expression vectors for humanised heavy chains
[0634] The construction of high-level expression vectors for humanised heavy chains is outlined
in Figure 44.
1) Synthesis of primers for preparing SR a promoter DNA fragment
[0635] The SR α promoter DNA fragment, for insertion into the expression vectors for humanised
heavy chains, was synthesised using PCR.
[0636] In addition to HINDB (SEQ ID No 122), the following oligonucleotide primer was synthesised
for PCR:

2) Construction of plasmids
[0637] The SR α promoter DNA fragment was synthesised using PCR, inserted into the above
described vector, pEg7AH-H or pEgPDHV3-21, and then cloned into
E. coli.
[0638] The HSR α-DNA fragment, comprising the SR α promoter with a NotI restriction enzyme
cleavage site added at the 5'-end and a HindIII restriction enzyme cleavage site added
at the 3'-end, was prepared as follows.
Composition of the PCR reaction solution: |
plasmid pME18S DNA, 200 ng; |
oligonucleotide primer NOTA, 80 pmol; |
oligonucleotide primer HINDB, 80 pmol; |
dNTP cocktail, 20 µl; |
10× Pfu buffer, 20 µl; |
Pfu DNA polymerase, 10 units; and |
redistilled water to a final volume of 200 µl. |
[0639] The PCR reaction was conducted as follows. The solution was first heated at 94°C
for 2 minutes, after which a cycle of heating to 94°C for 1 minute, 55°C for 1 minute
and 72°C for 2 minutes, was repeated 30 times. After completion of this procedure,
the reaction solution was heated at 72°C for 10 minutes.
[0640] After PCR, the amplified HSR α-DNA fragment was subjected first to phenol extraction
and then to ethanol precipitation, and then separated by 5% w/v polyacrylamide gel
electrophoresis. After electrophoresis, the gel was stained with 1 µg/ml of ethidium
bromide, and the DNA band thus detected, under UV light, was cut out with a razor
blade and eluted from the gel using a Centriruter and a Centricon-10, as described
above. The eluted DNA was concentrated by centrifugation at 7,500 x g, followed by
ethanol precipitation, and was finally dissolved in 50 µl of distilled water.
[0641] One µg of plasmid pEg7AH-H or pEgPDHV3-21 DNA was then digested with the restriction
enzymes NotI and HindIII, and then dephosphorylated with CIP. The resulting dephosphorylated
plasmid DNA (100 ng) was ligated with 10 µl of the solution containing the HSR α-DNA
fragment, which had previously also been digested with NotI and HindIII, using a DNA
Ligation Kit Version 2.0 (Takara Shuzo, Co. Ltd.).
E. coli JM109 was transformed with the ligation mix and plated onto LB agar medium containing
final concentrations of 1 mM IPTG, 0.1% w/v X-Gal and 50 µg/ml ampicillin. The white
transformants obtained were cultured in 2 ml liquid LB medium containing 50 µg/ml
ampicillin at 37°C overnight, and plasmid DNA was extracted from the resulting culture
by the alkaline-SDS method. The extracted plasmid DNA was digested with NotI and HindIII,
and a clone carrying then HSR α-DNA fragment was selected by 1% w/v agarose gel electrophoresis.
[0642] By following the above procedure, the high-level expression vector plasmids pSRg7AH
and pSRgPDH (HV type) were obtained.
EXAMPLE 12
Expression in COS-1 Cells
[0643] Transfection of COS-1 cells with the high-level expression plasmids, for each of
the humanised HFE7A heavy chains and for each of the humanised HFE7A light chains
obtained above, was conducted by electroporation in a manner similar to that described
in Example 4.
[0644] COS-1 cells were grown to semi-confluence in a culture flask (culture area: 225 cm
2), containing α(+)MEM supplemented with 10% v/v FCS. Next, the medium was discarded
and the COS-1 cells were detached from the flask by treatment with 3 ml of trypsin-EDTA
solution (Sigma Chemicals Co.) at 37°C for 3 minutes. The detached cells were then
harvested by centrifugation at 800 r.p.m. for 2 minutes and then washed twice with
PBS(-) buffer. The washed COS-1 cells were then adjusted to 1 x 10
8 cells/ml with PBS(-) buffer to produce a COS-1 cell suspension.
[0645] In parallel, 4 µg of humanised HFE7A heavy chain expression plasmid DNA and 4 µg
of humanised HFE7A light chain expression plasmid DNA, prepared by the alkaline-SDS
method and caesium chloride density gradient centrifugation, were mixed and then precipitated
with ethanol, before being suspended in 20 µl of PBS(-) buffer, the whole operation
being performed in the same tube. The whole of the resulting plasmid suspension (20
µl) was mixed with 20 µl of the previously prepared COS-1 cell suspension (2 x 10
6 cells) and the mixture was transferred to a FCT-13 (Shimadzu Seisakusyo, K. K.) chamber
having electrodes set 2 mm apart. This chamber was then loaded into gene transfection
apparatus GTE-1 (Shimadzu Seisakusyo, K. K.) and two pulses, each of 600 V, 50 µF,
were applied with a one second interval to transform the COS-1 cells with the plasmid
DNA of interest.
[0646] After electroporation, the cell-DNA mixture in the chamber was suspended in 5 ml
of α(+)MEM, supplemented with 10% v/v FCS, in a culture flask (culture area 25 cm
2; Sumitomo Bakelite) and incubated under 5% v/v CO
2 at 37°C for 72 hours. After this time, the culture supernatant was taken and analyzed
for the expression products.
[0647] By following the above method, COS-1 cells transfected with each of the following
plasmid combinations were obtained:
(A) no plasmid DNA;
(B) cotransfection of pSRgPDH and pSRPDHH;
(C) cotransfection of pSRgPDH and pSRPDHM;
(D) cotransfection of pSRg7AH and pSRHH;
(E) cotransfection of pSRg7AH and pSRHM; and
(F) cotransfection of pSRg7AH and pSRMM.
EXAMPLE 13
Assay for Fas-Binding Activity
[0648] The assay for Fas-binding activity in the cell culture supernatant fluids prepared
in Example 12 was performed by ELISA as follows.
[0649] Culture supernatant from COS-1 cells expressing the human Fas fusion protein, as
obtained in Reference Example 1 above, diluted 5-fold with adsorption buffer, was
dispensed into wells of a 96-well plate (MaxiSorb; Nunc) at 50 µl per well and the
plate was incubated at 4°C overnight to allow adsorption of the human Fas fusion protein
to the surface of the wells. Next, each of the wells was washed 4 times with 350 µl
of PBS-T. After washing, PBS-T containing 5% v/v BSA (bovine serum albumin; Wako Pure
Chemical Industries, Ltd.) was added to the wells at 50 µl per well and the plate
was incubated at 37°C for 1 hour to block the remainder of the surface of each well.
The wells were then again washed four times with PBS-T.
[0650] The culture supernatants obtained in Example 4 were adjusted to have a final concentration
of the product of interest of 100 ng/ml in α(+)MEM containing 10% v/v FCS. Concentrations
were estimated by the method described in Example 5. Each of the resulting 100 ng/ml
solutions was then used to produce serial dilutions by serial 2-fold dilution with
α(+)MEM containing 10% v/v FCS. Next, 50 µl of each of the resulting serial dilutions
of each expression product was added to a well prepared as above, and the plate was
incubated at 37°C for 2 hours to allow reaction.
[0651] After this time, the wells were again washed four times with PBS-T, and then 50 µl
of alkaline phosphatase-labeled goat anti-human IgG Fc specific polyclonal antibody
(Caltag Lab.), diluted 10,000-fold with PBS-T, were dispensed into each well and reaction
was allowed to proceed at 37°C for 2 hours.
[0652] HFE7A purified from mouse hybridoma HFE7A was used as a control (IgGl), and was detected
using alkaline phosphatase-labeled goat anti-mouse IgG + IgA + IgM (Gibco BRL), diluted
5,000-fold with PBS-T, in place of the alkaline phosphatase-labeled goat anti-human
IgG Fc specific polyclonal antibody.
[0653] The wells were again washed four times with PBS-T, and then 50 µl of substrate solution
[1 mg/ml p-nitrophenyl phosphate in 10% v/v diethanol amine (pH 9.8)] was dispensed
into each well and the plate was incubated at 37°C for 0.5 to 1 hour. Binding activity
of the expression product contained in each culture supernatant fluid with the human
Fas fusion protein was evaluated by reading the absorbance of each well at 405 nm.
[0654] As expected, binding activity for the human Fas fusion protein was demonstrated for
the supernatants of categories (B), (C), (D), (E) and (F) above of Example 12, and
is shown Figure 45.
EXAMPLE 14
Competitive Inhibition of Fas-Binding Activity of HFE7A
[0655] The humanised anti-Fas antibodies obtained in Example 12 should inhibit the binding
of HFE7A to Fas, as the antibodies of this Example were derived from HFE7A. Therefore,
the ability of the expression products obtained in Example 12 to competitively inhibit
the binding of HFE7A to the human Fas fusion protein was measured.
[0656] The COS-1 cell culture supernatant containing the human Fas fusion protein, as obtained
in Reference Example 1, was diluted 5-fold with adsorption buffer, and dispensed into
the wells of a 96-well plate for luminescence detection (Luminescent Solid Assay Plate,
high binding property; Costar) at 50 µl per well. The plate was then incubated at
4°C overnight to allow adsorption of the human Fas fusion protein to the surface of
the wells.
[0657] After this time, each well was washed 4 times with 350 µl of PBS-T, and then 100
µl PBS-T containing 5% v/v BSA was added to each well and the plate was incubated
at 37°C for 1 hour to block the remainder of the surface of each well. The wells were
then again washed four times with PBS-T.
[0658] The culture supernatants obtained in Example 12 were adjusted to final concentrations
of antibody of 1 µg/ml in α(+)MEM containing 10% v/v FCS by the method of Example
5. Each of the resulting solutions of the expression products was used to produce
serial dilutions by serial 2-fold dilution with α(+)MEM containing 10% v/v FCS. AP-HFE7A
was diluted to 50 ng/ml with α(+)MEM containing 10% v/v FCS, and 25 µl of the resulting
solution was mixed with an equal volume of each of the prepared serial dilutions.
[0659] Each of the wells was again washed four times with PBS-T, and then 50 µl of each
of the resulting antibody mixtures were added to individual wells, and the plate was
allowed to stand at room temperature overnight. Subsequently, after washing each well
with PBS-T again four times, 100 µl of CDP-star buffer (9.58 ml diethanol amine, 0.2
g magnesium chloride, 0.25 g sodium azide, pH8.5) was dispensed into each well and
the plate was allowed to stand at room temperature for 10 minutes. After this time,
the CDP-star buffer was discarded and CDP-star substrate [1.2 ml sapphire II (Tropix),
200 µl CDP-star (Tropix), q.s. to 12 ml with CDP-star buffer] was added at 50 µl per
well, and the plate was then allowed to stand at room temperature for a further 40
minutes.
[0660] Competitive inhibition of the expression products of Example 12 of the binding of
HFE7A to the human Fas fusion protein was evaluated by measuring the intensity of
the luminescence with Luminoscan (Titertech).
[0661] As expected, it was verified that each of the expression products of supernatants
(B), (C), (D), (E) and (F) obtained in Example 12 above specifically inhibited the
binding of HFE7A antibody to the human Fas fusion protein. The results are shown in
Figure 46.
EXAMPLE 15
Apoptosis-Inducing Activity
[0662] The apoptosis-inducing activity of the expression products in the culture supernatant
fluids obtained in Example 12 was examined in a manner similar to that described in
Example 8.
[0663] WR19L12a cells were cultured in RPMI1640 medium with 10% v/v FCS (Gibco BRL) at 37°C
for 3 days under 5% v/v CO
2, and 50 µl (1 x 10
5 cells) of the resulting culture were then dispensed into each well of a 96-well microplate
(Sumitomo Bakelite). The culture supernatants obtained in Example 12 were adjusted
to a final concentration of antibody of 100 ng/ml in RPMI1640 medium containing 10%
v/v FCS. Concentrations were estimated by the method of Example 5. Each of the adjusted
solutions of the expression products was used to produce serial dilutions by serial
2-fold dilution with RPMI1640 containing 10% v/v FCS. Each of the resulting dilutions
of each expression product solution was added to individual wells, at 50 µl per well,
and the plate was incubated at 37°C for 1 hour. After this time, the cells in each
well were washed once with RPMI1640 containing 10% v/v FCS and then the washed cells
were suspended in 100 µl per well of 0.5 µg/ml goat anti-human IgG Fc specific polyclonal
antibody (Kappel) in RPMI1640 containing 10% v/v FCS.
[0664] The plate was allowed to stand at 37°C for 12 hours, and then 50 µl of 25 µM PMS
(phenazine methosulphate; Sigma Chemical Co.), containing 1 mg/ml XTT [2,3-bis(2-methoxy-4-nitro-5-sulphophenyl)-2
H-tetrazolium-5-carboxyanilide inner salt; Sigma Chemical Co.] to final concentrations
of 333 µg/ml for XTT and 8.3 µM for PMS, were added to each well. The plate was then
incubated for 3 hours at 37°C, and the absorbance at 450 nm of each well was measured,
to calculate cell viability, using the reducing power of the mitochondria as the index.
[0665] The viability of the cells in each well was calculated according to the following
formula:
Viability (%) = 100 x (a-b) / (c-b)
wherein "a" is the absorbance of a test well, "b" is the absorbance of a well with
no cells, and "c" is the absorbance of a well with no antibody added.
[0666] As expected, each of the expression products of the culture supernatant fluids (B),
(C), (D), (E) and (F) obtained in Example 12 above were demonstrated to induce apoptosis
in T cells of this lymphoma cell line expressing human Fas antigen (Figure 47).
Annex to the description