FIELD OF THE INVENTION
[0001] The present invention is directed to nucleic acid molecules encoding
Polistinae venom allergens, in particular hyaluronidase, or immunomodulatory fragments thereof,
recombinant vectors comprising such nucleic acid molecules, and host cells containing
the recombinant vectors. The invention is further directed to expression of such nucleic
acid molecule to produce the recombinant
Polistinae venom enzyme, hyaluronidase, or recombinant immunomodulatory fragments thereof. Such
an allergen and immunomodulatory fragments thereof are useful for diagnosis of allergy,
for therapeutic treatment of allergy, for the treatment of immune system related diseases
or disorders, or symptoms related thereto, and for the modulation of immune response
towards an immunogen.
BACKGROUND OF THE INVENTION
[0003] There are many species of hornets (genus
Dolichovespula), yellow jackets (genus
Vespula) and wasp (genus
Polistes) in North America (
Akre, et al., 1980, "Yellowjackets of America North of Mexico," Agriculture Handbook
No. 552, US Department of Agriculture). The vespids have similar venom compositions (
King, et al., 1978, Biochemistry 17:5165;
King, et al., 1983, Mol. Immunol. 20:297;
King, et al., 1984, Arch. Biochem. Biophys. 230:1;
King, et al., 1985, J. Allergy and Clin. Immunol. 75:621;
King, 1987, J. Allergy Clin. Immunol. 79:113;
Hoffman, 1985, J. Allergy and Clin. Immunol. 75:611). Their venom each contains three major venom allergens, phospholipase (37 kD), hyaluronidase
(43 kD) and antigen 5 (23 kD) of as yet unknown biologic function.
U.S. Patent No. 5,593,877 describes cloning and expression of the vespid venom allergens phospholipase and
hyaluronidase. As described in this patent, the recombinant allergens permit expression
of a protein or fragments thereof for use in immunotherapy, dignostics, and to investigate
T and B cell allergens, it sets forth in greater detail the rationale for cloning
vespid venom enzymes. However, unique vespid venom cDNAs were not described.
[0004] In addition to the insect venom allergens described above, the complete amino acid
sequence of several major allergens from different grass (
Perez, et al., 1990, J. Biol. Chem. 265:16210;
Ansari, et al., 1989, Biochemistry 26:8665;
Silvanovich, et al., 1991, J. Biol. Chem. 266:1204), tree pollen (
Breiteneder, 1989, EMBO J. 8:1935;
Valenta, et al., 1991, Science, 253:557), weed pollen (
Rafnar, et al., 1991, J. Biol. Chem. 266:1229;
Griffith, et al., 1991, Int. Arch. Allergy Appl. Immunol. 96:296), mites (
Chua, et al., 1988, J. Exp. Med. 167:175), cat dander (
Griffith, et al., 1992, Gene. 113:263), and mold (
Aruda, et al., 1990, J. Exp. Med. 172:1529;
Han, et al., 1991, J. Allergy Clin. Immunol. 87:327) have been reported in the past few years. These major allergens are proteins of
10-40 kD and they have widely different biological functions. Nearly all allergens
of known sequences have a varying extent of sequence similarity with other proteins
in our environment.
[0005] Although
U.S. Patent No. 5,593,877 provides for cloning and expression of vespid venom enzymes, particularly hyaluronidase
and phospholipase, there remains a need to identify unusual and unexpected sequences
for such enzymes, and to design effective expression systems for them. There is a
particular need to delineate the B and helper T cell epitopes of the paper wasp
(e.g., Polistes annularis). In particular, the major
Polistinae venom allergens phospholipase and hyaluronidase are appropriate targets for determining
the important B and T cell epitopes. In order to fully address the basis for allergic
response to vespid allergens, and to develop allergen-based immunotherapies, the cDNA
and protein sequences of several homologous allergens need to be investigated. Moreover,
vectors suitable for high level expression in bacteria and eukaryotic cells of vespid
allergens or their fragments should be developed. Recombinant vespid allergens and
their fragments may then be used to map their B and T cell epitopes in the murine
and, more importantly, human systems by antibody binding and T cell proliferation
tests, respectively.
[0006] There is also a need in the art to use peptides having T or B cell epitopes of vespid
venom allergens to study induction of tolerance in mice and induction of tolerance
in humans.
[0007] There is a further need to test whether a modified peptide inhibits allergen T cell
epitope binding to MHC class II molecule, or induces T cell anergy, or both.
[0008] Thus, there is a need in the art for unique sequence information about vespid venom
allergens, and a plentiful source of such allergens for immunological investigations
and for immunological therapy of the allergy.
[0009] Furthermore, due to the overuse of antibiotics throughout the world, and to the spread
of numerous viruses, such as HIV, Ebolla, etc., efforts have been made to produce
new "super" antibiotic medication, and compounds which have activity against viruses.
For example, AZT has been developed, along with protease inhibitors to treat subjects
suffering from HIV. However, the costs of developing new "super" antibiotics and anti-viral
medications are enormous.
[0010] Hence, what is needed are agents and pharmaceutical compositions for treating immune
system related diseases or disorders whose activity is not dependent necessarily on
combating the particular virus or pathogen, but rather modulate or potentiate the
immune system is ability to combat the disease or disorder, thereby ameliorating the
disease or disorder, or a symptom related thereto. Hymenoptera venoms, particularly
vespid venoms, provide one possible source for such agents and pharmaceutical compositions,
as described in
U.S. Patent Nos. 4,822,608 and
5,827,829.
[0011] The citation of references herein shall not be construed as an admission that such
is prior art to the present invention.
SUMMARY OF THE INVENTION
[0012] The present invention provides a nucleic acid molecule encoding
Polistinae venom enzyme encoding a hyaluronidase having the activity of the hyaluronidase of
SEQ ID N.4, or, immunomodulatory fragments thereof. In particular, the invention is
directed to such nucleic acid molecules encoding a
Polistinae venom hyaluronidase. In specific embodiments, a nucleic acid molecule of the invention
encodes an immunomodulatory portion of a T cell epitope of a
Polistinae venom enzyme. In another embodiment, a nucleic acid molecule of the invention encodes
an antigenic portion of a B cell epitope of a
Polistinae venom enzyme.
[0013] The nucleic acid of the invention, which is not genomic, surprisingly is found in
one embodiment, to contain a non-coding, e.g., an intronic sequence. In a specific
embodiment, cDNA molecules for
Polistinae venom enzyme contain what appears to be an intron. Thus, it has unexpectedly proved
necessary to delete the "intronic" sequence in order to obtain a nucleic acid coding
for a mature
Polistinae venom enzyme, e.g., hyaluronidase.
[0014] Hence broadly, the present invention extends to an isolated nucleic acid molecule
encoding a venom enzyme, variants thereof encoding a hyaluronidase having the activity
of the hyaluronidase of SEQ ID N.4 ,or, immunomodulatory fragment thereof. As noted
above, the nucleic acid molecule contains internal non-coding sequences, i.e., in
addition to 5
- and 3
- untranslated (UTR) sequences., but is not a genomic sequence. Examples of
Polistinae venom enzymes which can be encoded by an isolated nucleic acid molecule of the invention
include, but are not limited to phospholipase and hyaluronidase, variants thereof
having the activity of the hyaluronidase of SEQ ID N.4, immunomodulatory fragments
thereof, from the venom of numerous
Polistinae venoms can b encoded by an isolated nucleic acid molecule of the invention. A particular
example comprises
Polistinae of the genus
Polistes, and particularly the species
annularis.
[0015] In another particular embodiment, the present invention extends to an isolated nucleic
acid molecule, that encodes hyaluronidase from
Polistes annularis comprising an amino acid sequence of SEQ ID NO: 4, more particularly wherein the
isolated nucleic acid has a nucleotide sequence of SEQ ID NO:3 or fragment thereof,
or variants thereof, encoding a hyaluronidase having the activity of the hyaluronidase
of SEQ ID N.4, and, immunomodulatory fragments thereof.
[0016] Moreover, the present invention further extends to an isolated nucleic acid molecule
encoding a
Polistinae venom enzyme variants thereof, encoding a hyaluronidase having the activity of the
hyaluronidase of SEQ ID N.4, or an immunomodulatory fragment, wherein the isolated
nucleic acid molecule encodes an immunomodulatory portion of a T cell epitope or an
antigenic portion of a B cell epitope of the
Polistinae venom enzyme. Moreover the present invention extends to an isolated nucleic acid
molecule encoding a
Polistinae venom hyaluronidase comprising an amino acid sequence of SEQ ID NO: 4, or an immunomodulatory
fragment thereof; or variants of said molecule encoding a hyaluronidase having the
activity of the hyaluronidase of SEQ ID NO: 4, wherein said molecule is hybridizable
to the isolated nucleic acid molecule consisting of the DNA sequence of SEQ ID NO:3
under high stringency hybridisation conditions corresponding to a T
m greater than or equal to about 65°C. Likewise, the present invention extends to an
isolated polypeptide comprising an immunomodulatory portion of a T cell epitope of
a
Polistinae venom enzyme, wherein the polypeptide is encoded by an isolated nucleic acid molecule
of the invention. Examples of waso venom enzymes for which isolated nucleic acid molecules
of the present invention encode an immunomodulatory portion of a T cell epitope include,
but certainly are not limited to, hyaluronidase. In a specific embodiment, the hyaluronidase
originate from a genus
Polistes, and particularly from the species
annularis.
[0017] The invention further provides cloning vectors and expression vectors, which permit
expression of the nucleic acids. Such vectors contain nucleic acids of the invention
as set forth above. In the case of expression vectors, such nucleic acids are operatively
associated with an expression control sequence.
[0018] The invention advantageously provides a method of producing a
Polistinae venom hyaluronidase, variants thereof, encoding a hyaluronidase having the activity
of the hyaluronidase of SEQ. ID N.4 or immunomodulatory fragments thereof, which,
comprises the steps of:
- (a) culturing a host cell transformed with an expression vector comprising an isolated
nucleic acid molecule hybridizable to an isolated nucleic acid molecule comprising
a DNA sequence of SEQ ID NO:3, or preferably having a sequence of SEQ ID NO:3, or
variants thereof, encoding a hyaluronidase having the activity of the hyaluronidase
of SEQ. ID N.4, wherein the isolated nucleic acid molecule is operationally associated
with a promoter, so that the Polistinae venom hyaluronidase, conserved variant thereof, immunomodulatory fragment thereof,
or analog or derivative thereof is produced by the host cell; and
- (b) recovering the Polistinae venom hyaluronidase, or variant thereof, encoding a hyaluronidase having the activity
of the hyaluronidase of SEQ. ID N.4 immunomodulatory fragment thereof, so produced,
from the culture, the host cell, or both.
[0019] In a particular example, the methods set forth above yield hyaluronidase of the genus
Polistes, and particularly from the species
annularis, wherein the hyaluronidase comprises an amino acid sequence of SEQ ID NO:4, variants
thereof having the activity of the hyaluronidase of SEQ. ID N'4 or immunomodulatory
fragments thereof.
[0020] The present invention further extends to pharmaceutical compositions effective for
the treatment of a venom allergen-specific allergic condition. In particular, the
present invention extends to a pharmaceutical composition comprising a polypeptide
encoded by an isolated nucleic acid molecule which encodes an immunomodulatory portion
of a T cell or an antigenic portion of a B cell epitope of a
Polistinae venom enzyme,
e.g., a hyaluronidase, and a pharmaceutically acceptable carrier thereof. Consequently,
in a preferred embodiment, a pharmaceutical composition of the invention comprises
an immunomodulatory T cell epitope of
Polistes annularis venom hyaluronidase or an antigenic portion of a B cell epitope of
Polistes annularis hyaluronidase.
[0021] Naturally, the present invention extends to a method for treating a vespid venom
allergen-specific allergic condition comprising administering a therapeutically effective
amount of a pharmaceutical composition of the invention, examples of which are set
forth above. Administration of a pharmaceutical composition of the invention can occur
parenterally, and particularly orally, pulmonarily, nasally, topically or systemically.
[0022] Furthermore, the present invention extends to use of a recombinant
Polistinae venom enzyme of the invention in the manufacture of a medicament for, and an associated
method for modulating an immune response towards an immunogen,
e.g., treating a vespid allergic condition or treating an immune system related disease
or disorder or a symptom of the immune system related disease or disorder. The polypeptide
is encoded by an isolated nucleic acid molecule which encodes a
Polistinae venom enzyme, wherein the polypeptide comprises an immunomodulatory fragment of a
Polistinae venom enzyme. More particularly, an agent for treating an immune system related disease
or disorder, or symptom related thereto, comprises a
Polistinae venom enzyme or a vector that permits expression of the
Polistinae venom or enzyme
in vivo.
[0023] Hence, an agent for treating an immune system related disorder or disease, or a symptom
thereof, comprises an isolated polypeptide encoded by an isolated nucleic acid molecule
which encodes a
Polistinae venom hyaluronidase, or variants thereof encoding a hyaluronidase having the activity
of the hyaluronidase of SEQ ID N.4 or immunomodulatory fragments thereof.
[0024] Furthermore, the present invention extends to a pharmaceutical composition for modulating
an immune response towards an immunogen,
e.g., treating a vespid allergic condition or treating an immune system related disease
or disorder or a symptom related thereto, wherein the pharmaceutical composition comprises
a recombinant
Polistinae venom enzyme and a pharmaceutically acceptable carrier thereof.
[0025] Administration of a pharmaceutical composition for treating an immune system related
disease or disorder to a subject can be carried out parenterally, and particularly
orally, pulmonarily, nasally, topically or systemically. Furthermore, numerous diseases
or disorders related to the immune system can be treated with the present invention.
Examples include, but are no limited to, a pathogenic disease or disorder such as
a viral disease or disorder,
e.g., HIV, Herpes Simplex virus, or papiloma virus; an autoimmune disease
e.g. arthritis or Lupus; or a combination of such diseases or disorders.
[0026] It is a specific object of the invention to provide the surprising DNA sequence of
isolated nucleic acid (cDNA) molecules that encode
Polistes annularis hyaluronidase, variants thereof, encoding a hyaluronidase having the activity of
the hyaluronidase of SEQ ID N.4 or immunomodulatory fragments thereof.
[0027] It is still yet another object of the invention to provide amino acid sequences of
Polistes annularis hyaluronidase, along with variants thereof, having the activity of SEQ ID N.4, including
immunomodulatory portions of T cell epitopes and antigenic portions of B cell epitopes
of
Polistes annularis hyaluronidase, either containing, or more preferably free, of "intronic" sequence.
The deduced amino acid sequences of hyaluronidase from
Pol a allow comparison of their homology to analogous enzymes from other vespids. This
information provides a basis for evaluating cross-reactivity of the allergens, which
can be important for allergic reactions and for therapeutic treatments. Hence, in
a specific embodiment, the present invention enables one of ordinary skill in the
art to determine and evaluate the degree of similarity of hyaluronidase of
Pol a to environmental proteins and/or autologous proteins. It is believed that similarity
of the vespid venom enzymes to such environmental proteins, and particularly to autologous
proteins, has important implications for the allergic response.
[0028] It is yet still another object of the invention to provide expression and cloning
vectors comprising an isolated nucleic acid molecule encoding
Polistes annularis hyaluronidase, including fragments comprising an immunomodulatory portion of a T
cell epitope or an antigenic portion of a B cell epitope of these
Polistinae venom enzymes so that the isolated nucleic acid molecules can be reproduced and expressed.
[0029] Yet another object of the invention comprises production of
Polistinae venom enzymes such as hyaluronidase, along with variants thereof encoding a hyaluronidase
having the activity of hyaluronidase of SEQ ID N.4 or immunomodulatory fragments thereof,
using expression vectors of the invention, despite the presence of intronic sequences
in cDNA clones
[0030] Yet still another object of the invention is to provide agents and pharmaceutical
compositions for treating an allergen-specific allergic condition in a subject, wherein
the agents and pharmaceutical composition comprise an isolated polypeptide encoded
by an isolated nucleic acid molecules which encodes a
Polistinae venom enzyme, such as hyaluronidase, particularly from
Polistes annularis, wherein the polypeptide comprises an antigen portion of a B cell epitope, or an immunomodulatory
portion of a T cell epitope of, a
Polistinae hyaluronidase.
[0031] Yet still another object of the invention is to provide a method for treating a vespid
venom allergen-specific allergy in a subject, wherein a pharmaceutical composition
for treating an allergen-specific allergic condition is administered to the subject.
[0032] Yet still another object of the invention is to provide agents and pharmaceutical
compositions comprising such agents that treat an immune system related disease or
disorder in mammal, such as a pathogenic disease or disorder, a viral disease or disorder,
an autoimmune disease or disorder, or a combination of immune system related diseases
or disorders.
[0033] Still yet another object of the invention is to provide agents and pharmaceutical
composition for modulating immune response towards an immunogen in a mammal. As a
result, administration of such a pharmaceutical composition modulates the immune system's
ability to recognize and attack the immunogen. In a particular embodiment, the ability
of the immune system of the mammal to recognize and attack the immunogen is increased
upon administration of the pharmaceutical composition relative to the ability of the
subject's immune system to recognize and attack the immunogen prior to administration
of a pharmaceutical composition of the invention.
ABBREVIATIONS
[0034]
- Dol m Dolichovespula maculata
- white face hornet
- Dol a D. arenaria
- yellow hornet
- Pol a Polistes annularis
- wasp
- Pol e P. exclamans
- wasp
- Ves m Vespula maculifrons
- yellow jacket
- Ves v V. vulgaris
- yellow jacket
- PCR
- polymerase chain reaction
- RACE
- rapid amplification of cDNA ends
- TCR
- T cell receptor for antigen
BRIEF DESCRIPTION OF THE DRAWINGS
[0035]
Figure 1. The cDNA nucleotide sequence encoding Pol a venom phospholipase A1 (SEQ ID NO:1) and the amino acid sequence of Pol a venom phospholipase A1 (SEQ ID NO:2). Note that the first 18 amino acid residues of SEQ ID NO:2 represent
a portion of a signal sequence. Hence, amino acid residue 19 of SEQ ID NO:2 (glycine)
is the N-terminus amino acid residue in mature Pol a phospholipase A1.
Figures 2A and 2B. Pol a phospholipase cDNA contains two introns. (A) The nucleotide sequence of papla intron 1 (SEQ ID NO:5), an intron in Pol a venom phospholipase A1 cDNA located between nucleotides 111 and 112 of SEQ ID NO:1. (B) The nucleotide sequences of papla intron 2 (SEQ ID NO:6), an intron in Pol a venom phospholipase A1 cDNA located between nucleotides 720 and 721 of SEQ ID NO:1.
Figure 3. Amino acid residue sequence similarity among hornet venom phospholipase (SEQ ID
NO:7), yellowjacket phospholipase (SEQ ID NO:8) and paper wasp phospholipase A1 (SEQ ID NO:2).
Figure 4. The cDNA nucleotide sequence encoding Pol a venom hyaluronidase (SEQ ID NO:3) and the amino acid sequence of Pol a hyaluronidase (SEQ ID NO:4). Note that the first 23 amino acid residues of SEQ ID
NO:4 represent a portion of a signal sequence. Hence, amino acid residue 30 of SEQ
ID NO:4 (serine) is the N-terminus amino acid residue of mature Pol a hyaluronidase.
Figure 5. The nucleotide sequence of Pahya (SEQ ID NO:9), an intron in Pol a hyaluronidase cDNA, located between nucleotides 733 and 734 of SEQ ID NO:3.
Figure 6. Amino acid residue sequence similarity among bee venom (bv) hyaluronidase (SEQ ID
NO:10), Dol m (wfh) hyaluronidase (SEQ ID NO:11), Ves v (vv) hyaluronidase (SEQ ID NO:12), and Pol a (pa) hyaluronidase (SEQ ID NO:4).
DETAILED DESCRIPTION OF THE INVENTION
[0036] The present invention is directed to recombinant nucleic acid molecules encoding
Polistinae venom enzymes, such as hyaluronidase, and immunomodulatory fragments, and polypeptides
encoded by such nucleic acid molecules useful in the diagnosis and therapy of vespid
venom-specific allergy. In specific embodiments, the present invention is directed
to a recombinant nucleic acid molecule encoding
Pol a hyaluronidase, variants thereof, encoding a hyaluronidase having the activity of
the hyaluronidase of SEQ ID N.4 and immunomodulatory fragments thereof.
[0037] The present invention is based, on the surprising and wholly unexpected discovery
of internal non-coding segments of cDNA encoding
Pol a hyaluronidase. Prior to this discovery, cDNAs for vespid venom enzymes did not contain
such apparent "intronic" sequences.
[0038] This discovery has two significant implications. The first is that
Polistinae, and more particularly,
Polistes, and more particularly still,
Pol a, cDNAs appear to contain "introns". Thus,
Polistinaes of this subfamily express unique mRNAs, have unique mRNA processing capabilities,
and potentially represent interesting splice variants.
[0039] The term "introns" is used to refer to nucleic acid sequences that are not expected
to be present in a cDNA coding for hyaluronidase, and that are not 5' or 3' UTR sequences.
The sequences may represent unexpected splice variants of the proteins, incomplete
processing of mRNAs, or some regulatory feature found in this subfamily, genus, and
species of vespid.
[0040] The presence of these "intron" sequences significantly impacts preparation of expression
vectors. While it is possible to express the unique polypeptides encoded by these
cDNAs, in another embodiment an unpredictable modification of the cDNA is required
to eliminate these "introns" in order to express mature forms of the
Polistinae venom enzymes, e.g., for use in immunotherapy. Thus, it has unexpectedly proven necessary
to further engineer coding sequences for
Polistinae hyaluronidase. Once these "intron" sequences are deleted, hyaluronidase proteins
comprising the natural amino acid sequence can be obtained.
[0041] The invention is further directed to expression vectors comprising said hyaluronidase
nucleic acid molecule, and to methods for producing
Polistinae venom enzyme polypeptides of the invention by expressing such expression vectors
and recovering the produced
Polistinae venom enzyme polypeptides.
[0042] The invention also provides pharmaceutical compositions effective for the treatment
of a vespid venom, and likely even a hymenoptera venom, allergen-specific allergic
condition comprising a polypeptide of the invention, and methods for treating such
allergic conditions comprising administering a therapeutically effective amount of
the pharmaceutical compositions of the invention.
[0043] The polypeptides of the invention can also be useful for diagnosis of vespid, particularly
Polistinae , venom-specific allergic conditions.
[0044] In addition, it has been discovered that, unexpectedly, administration of a pharmaceutical
compositions comprising
Polistinae venom hyaluronidase can be used to treat an immune system related disease or disorder,
such as a pathogenic disease or disorder, a viral disease or disorder, an autoimmune
disease or disorder, or a combination of such diseases or disorders.
[0045] Accordingly, as used herein, the term
"Polistinae venom allergen" refers to a protein found in the venom of a
Polistinae, such as the paper wasp (
Polistes annularis)
, to which susceptible people are sensitized on exposure to the sting of the insect.
While most antigens are characterized by being reactive with specific IgG class antibodies,
an allergen is characterized by also being reactive with IgE type antibodies. The
IgE type antibodies are responsible for mediating the symptoms of an allergic condition,
i.e., immediate-type hypersensitivity.
[0046] As used herein, the term "vespid" is used according to the practice of those in the
field of allergy, and refers to insects belonging to the worldwide family of Vespidae,
i.e., social wasps including hornets, yellowjackets, and paper wasps. In particular, vespids
of the subfamily
Vespinae include the subfamilies
Vespinae and
Polistinae. More particularly, the vespids of the subfamily include the genera
Vespa Linnaeus,
Vespula Thomson,
Dolichovespula Rohwer, and
Polistes Latreille.
Vespula and
Dolichovespula can be considered subgenera of the genus
Vespula Species in the genus
Vespa include but are not limited to
V. crabro (L.) and
V. orientalis (Linnaeus). Species in the genus
Vespula include but are not limited to
V. germanica (Fab.),
V.
squamosa (Drury),
V. maculifrons (Buysson),
V. flavopilosa (Jacobson),
V. vulgaris (L.), and
V. pensylvanica (Saussure). Species in the genus
Dolichovespula include but are not limited to
P.
dominulus, D. maculata (L.) and
D. arenaria (Fab.).
[0047] The subfamily
Polistinae includes the genus
Polistes. Species in the genus
Polistes include but are not limited to
P. dominulus, Pol a (Linnaeus),
P. exclamans (Viereck), P.
metricus (Say),
P. fuscatus (Fabricius),
P. gallicus, pacificus,
P. canadensis, P. kaibabensis, P. comanchus, P. commanchus, P. annularis, P. exclamans,
P. instabilis, P. carnifex, P. major, P. metricus, P. perplexus, P. carolinus, P.
flavus, P. fuscatus, P. aurifer, P. dorsalis, P. bellicosus, P. apachus, P. sulcifer,
P. semenowi, P. atrimandibularis, P. biglumis, P. bischoffi, P. dominulus, P. nimpha,
P. Pgallicus, P. associus, P. gigas, P. stigma, P. adustus, P. snelleni, P. mandarinus,
P. chinensis, P. sulcatus, P. formosanus, P. japonicus, P. watttii, P. macaensis,
P. jadwigae, P. olivaceus, P. rothneyi, P. jokohamae, P. poeyi, P. paraguayensis,
P. rossi, P. cinctus, P. cavapyta, P. buysonni, P. brevifissus, P. ferreri, P. infuscatus,
P. satan, P. melanotus, P. erythrocephalus, P. lanio, P. penai, P. aterrimus, P. huacapistana,
P. versicolor, P. ninabamba, P. simillimus, P. adelphus, P. biguttatus, P. binotatus,
P. consobrinus, P. peruvianus, P. weyrauchorum, P. xanthogaster, P. maranonensis,
P. myersi, P. veracrucis, P. eburneus, P. stabilinus, P. pseudoculatus, P. apicalis,
P. oculatus, P. crinitus, P. cubensis, P. minor, P. incertus, P. franciscanus, P.
goeldii, P. olivaceus, P. bicolor, P. thoracicus, P. rufiventrus, P. moraballi, P.
angulinus, P. subsericeus, P. testaceicolor, P. claripennis, P. billardieri, P. davillae,
P. occipitalis, P. atrox, P. deceptor, P. niger, P. candidoi, P. geminatus, P. melanosoma,
P. actaeon, P. obscurus, P. bequaertianus, P. cinerascens, and
P. apachus (Saussure).
[0048] As used herein, the term "hyaluronidase" refers to the class of enzymes that act
on the disaccharide unit of D-glucuronic acid and N-acetyl-D-glucosamine. Such enzymes
mediate the hydrolysis of polymers of repeating disaccharides comprising D-glucuronic
acid and N-acetyl-D-glucosamine. One example of such polymer is hyaluronic acid. Hyaluronidase
catalyzes the release of reducing groups of N-acetylglucosamine from hyaluronic acid.
[0049] A "genomic" sequence contains all introns 5' and 3' untranslated sequences, and 5'
and 3' untranscribed, (and often regulatory) sequences of a gene. Thus, a coding sequence
is not genomic when it lacks one or more introns and 5' and 3' untranscribed sequences,
particularly regulatory sequences.
[0050] As used herein, the term "immunomodulatory" refers to an ability to increase or decrease
an antigen-specific immune response, either at the B cell or T cell level. Immunomodulatory
activity can be detected
e.g., in T cell proliferation assays, by measurement of antibody production, lymphokine
production or T cell responsiveness. In particular, in addition to affects on T cell
responses, the immunomodulatory polypeptides of the invention may bind to immunoglobulin
(
i.e., antibody) molecules on the surface of B cells, and affect B cell responses as well.
[0051] As used herein, the term "derivative" refers to a modified nucleic acid encoding
a
Polistinae, particularly a
Polistes, hyaluronidase venom enzyme that contains a substitution, deletion, or insertion,
and the protein encoded thereby. The term "derivative" specifically refers to a low
IgE binding derivative (or analog) that contains amino acid substitutions at key amino
acid residues, resulting in reduced IgE binding without disrupting the overall conformation
or secondary and tertiary structure of the protein. Low IgE binding derivatives are
described in
PCT/DK99/00136.
[0052] As used herein, the phrase "immune system related disease or disorder" refers to
a disease or disorder which evokes an immune response in a subject, or effects the
ability of the immune system to respond to an immunogen. Hence, examples of immune
system related diseases or disorders comprise a pathogenic disease or disorder; a
viral disease or disorder,
e.g. HIV, Herpes Simplex virus, or papiloma virus; an autoimmune disease,
e.g. arthritis or Lupus.
[0053] A "nucleic acid molecule" refers to the phosphate ester polymeric form of ribonucleosides
(adenosine, guanosine, uridine or cytidine; "RNA molecules") or deoxyribonucleosides
(deoxyadenosine, deoxyguanosine, deoxythymidine, or deoxycytidine; "DNA molecules")
in either single stranded form, or a double-stranded helix. Double stranded DNA-DNA,
DNA-RNA and RNA-RNA helices are possible. The term nucleic acid molecule, and in particular
DNA or RNA molecule, refers only to the primary and secondary structure of the molecule,
and does not limit it to any particular tertiary forms. Thus, this term includes double-stranded
DNA found,
inter alia, in linear or circular DNA molecules (e.g., restriction fragments), viruses, plasmids,
and chromosomes. In discussing the structure of particular double-stranded DNA molecules,
sequences may be described herein according to the normal convention of giving only
the sequence in the 5' to 3' direction along the nontranscribed strand of DNA (i.e.,
the strand having a sequence homologous to the mRNA). A "recombinant DNA molecule"
is a DNA molecule that has undergone a molecular biological manipulation.
[0054] A nucleic acid molecule is "hybridizable" to another nucleic acid molecule, such
as a cDNA, genomic DNA, or RNA, when a single stranded form of the nucleic acid molecule
can anneal to the other nucleic acid molecule under the appropriate conditions of
temperature and solution ionic strength
(see Sambrook et al.,
supra). The conditions of temperature and ionic strength determine the "stringency" of the
hybridization. For preliminary screening for homologous nucleic acid molecules, low
stringency hybridization conditions, corresponding to a T
m of 55°, can be used,
e.g., 5x SSC, 0.1% SDS, 0.25% milk, and no formamide; or 30% formamide, 5x SSC, 0.5% SDS).
Moderate stringency hybridization conditions correspond to a higher T
m (about 60°), e.g., 40% formamide, with 5x or 6x SSC. High stringency hybridization
conditions correspond to the highest T
m (greater than or equal to about 65°),
e.g., 50% formamide, 5x or 6x SSC. Hybridization requires that the two nucleic acid molecules
contain complementary sequences, although depending on the stringency of the hybridization,
mismatches between bases are possible. The appropriate stringency for hybridizing
nucleic acid molecules depends on the length of the nucleic acid molecules and the
degree of complementation, variables well known in the art. The greater the degree
of similarity or homology between two nucleotide sequences, the greater the value
of T
m for hybrids of nucleic acid molecules having those sequences. The relative stability
(corresponding to higher T
m) of nucleic acid hybridizations decreases in the following order: RNA:RNA, DNA:RNA,
DNA:DNA. For hybrids of greater than 100 nucleotides in length, equations for calculating
T
m have been derived
(see Sambrook et al.,
supra, 9.50-0.51). For hybridization with shorter nucleic acid molecules,
i.e., oligonucleotides, the position of mismatches becomes more important, and the length
of the oligonucleotide determines its specificity
(see Sambrook et al.,
supra, 11.7-11.8). Preferably a minimum length for a hybridizable nucleic acid molecule
is at least about 10 nucleotides; preferably at least about 10 nucleotides; and more
preferably the length is at least about 20 nucleotides; even more preferably 30 nucleotides;
and most preferably 40 nucleotides.
[0055] The term "standard hybridization conditions" refers to a T
m of 55°C, and utilizes conditions as set forth above. In a preferred embodiment, the
T
m is 60°C; in a more preferred embodiment, the T
m is 65°C.
[0056] A DNA "coding sequence" is a double-stranded DNA sequence which is transcribed and
translated into a polypeptide
in vivo when placed under the control of appropriate regulatory sequences. The boundaries
of the coding sequence are determined by a start codon at the 5' (amino) terminus
and a translation stop codon at the 3' (carboxyl) terminus. A coding sequence can
include, but is not limited to, prokaryotic sequences, cDNA from eukaryotic mRNA,
genomic DNA sequences from eukaryotic (e.g., mammalian) DNA, and even synthetic DNA
sequences. If the coding sequence is intended for expression in a eukaryotic cell,
a polyadenylation signal and transcription termination sequence will usually be located
3' to the coding sequence.
[0057] Transcriptional and translational control sequences are DNA regulatory sequences,
such as promoters, enhancers, terminators, and the like, that provide for the expression
of a coding sequence in a host cell. In eukaryotic cells, polyadenylation signals
are control sequences.
[0058] A "promoter sequence" is a DNA regulatory region capable of binding RNA polymerase
in a cell and initiating transcription of a downstream (3' direction) coding sequence.
For purposes of defining the present invention, the promoter sequence is bounded at
its 3' terminus by the transcription initiation site and extends upstream (5' direction)
to include the minimum number of bases or elements necessary to initiate transcription
at levels detectable above background. Within the promoter sequence will be found
a transcription initiation site (conveniently defined for example, by mapping with
nuclease S1), as well as protein binding domains (consensus sequences) responsible
for the binding of RNA polymerase. Eukaryotic promoters will often, but not always,
contain "TATA" boxes and "CAT" boxes.
[0059] A coding sequence is "under the control" of transcriptional and translational control
sequences in a cell when RNA polymerase transcribes the coding sequence into mRNA,
which is then translated into the protein encoded by the coding sequence.
[0060] A "signal sequence" can be included before the coding sequence. This sequence encodes
a signal peptide, N-terminal to the polypeptide, that directs the host cell to transport
the polypeptide to the cell surface or secrete the polypeptide into the media, and
this signal peptide is usually selectively degraded by the cell upon exportation.
Signal sequences can be found associated with a variety of proteins native to prokaryotes
and eukaryotes.
[0061] In accordance with the present invention there may be employed conventional molecular
biology, microbiology, and recombinant DNA techniques within the skill of the art.
Such techniques are explained fully in the literature. See,
e.g.,
Sambrook, Fritsch & Maniatis, "Molecular Cloning: a Laboratory Manual," Second Edition
(1989) Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York (herein "Sambrook et al., 1989"); "
DNA Cloning: a Practical Approach," Volumes I and II (D.N. Glover ed. 1985); "
Oligonucleotide Synthesis" (M.J. Gait ed. 1984); "
Nucleic Acid Hybridization" [B.D. Hames & S.J. Higgins eds. (1985)]; "
Transcription And Translation" [B.D. Hames & S.J. Higgins, eds. (1984)]; "
Animal Cell Culture" [R.I. Freshney, ed. (1986)]; "
Immobilized Cells And Enzymes" [IRL Press, (1986)];
B. Perbal, "a Practical Guide To Molecular Cloning" (1984).
[0062] The present invention is based, on the cloning and sequence determination of a
Polistinae venom hyaluronidase. The cloning and sequence determination of this
Polistinae venom enzymes is highly significant, since the cDNA clones unexpectedly contain extra
nucleotide sequences that do not appear to encode polypeptide . Vespid venom allergic
conditions are common, and in some sensitive individuals an allergic reaction can
proceed to anaphylaxis, which is potentially fatal. As with vespids in general,
Polistinae venom components are likely to play an important role in production of allergy. It
is therefore of great importance that the nucleotide and amino acid sequence information
for the
Polistinae venom allergens is known. so that accurate diagnostic information about the nature
of the allergic condition, especially specific allergen sensitivities, can be determined
and effective therapeutic treatments of the underlying allergic condition can be effected.
It has unexpectedly been the case here, since
Polistinae cDNAs were surprisingly found with non-transcribed sequences.
Isolation of a Nucleic Acid Molecule Encoding a Wasp Venom Enzyme
[0063] Isolation of nucleic acid molecules encoding vespid venom enzymes was fully described
in
U.S. Patent No. 5,593,877. The present invention concerns the unexpected and surprising discoveries that
Polistinae cDNAs contain "introns". Typically, introns are spliced out of mRNA and are, therefore,
not usually found in cDNAs. The sequences may represent splice variants.
[0064] Derivatives of a
Polistinae venom enzyme, fragments, and fusion proteins (see
infra)
, are additionally provided, as well as nucleic acid molecules encoding the same.
[0065] The present invention provides the complete nucleic acid sequence of a
Polistinae venom enzyme. In particular, the present invention provides the nucleic acid sequence
of a
Polistinae hyaluronidase (paper wasp) and hyaluronidase, in particular
Pol a hyaluronidase.
[0066] In a specific embodiment, to obtain a nucleic acid molecule encoding a
Polistinae venom enzyme, polymerase chain reaction (PCR) is combined with the rapid amplification
of cDNA ends (RACE) technique described by
Frohman et al. (Proc. Nat. Acad. Sci. USA, 1998, 85:8998-9002; see also
Frohman, 1990, Amplifications: A Forum for PCR Users 5:11) to amplify a fragment encoding a sequence comprising the
Polistinae venom enzyme prior to selection. Oligonucleotide primers representing a
Polistinae venom enzyme of the invention can be used as primers in PCR. Generally, such primers
are prepared synthetically. Sequences for such oligonucleotide primers can be deduced
from amino acid sequence information. Such oligonucleotide sequences may be non-degenerate,
but more frequently the sequences are degenerate. More preferably, the primers are
based on the nucleic acid sequences for the
Polistinae venom enzymes disclosed herein. The oligonucleotides may be utilized as primers to
amplify by PCR sequences from a source (RNA or DNA), preferably a cDNA library, of
potential interest. For example, PCR can be used to amplify a
Polistinae venom enzyme coding sequence from a
Polistinae acid gland cDNA library. PCR can be carried out,
e.g., by use of a Perkin-Elmer Cetus thermal cycler and Taq polymerase (Gene Amp
™).
[0067] For isolating a homolog of
a Polistinae venom enzyme from any species of
Polistinae one can choose to synthesize several different degenerate primers for use,
e.g., in PCR reactions. It is also possible to vary the stringency of hybridization conditions
used in priming PCR reactions, to allow for greater or lesser degrees of nucleotide
sequence similarity between a homolog of a
Polistinae venom enzyme and a specific
Polistinae venom enzyme disclosed herein. After successful amplification of a segment of a homolog
of a
Polistinae venom enzyme, that segment may be cloned and sequenced, and utilized as a probe to
isolate a complete cDNA or genomic clone. This, in turn, will permit the determination
of the complete nucleotide sequence, the analysis of its expression, and the production
of its protein product for functional analysis, as described
infra. In this fashion, additional genes encoding
Polistinae venom enzymes, in particular, hyaluronidases, may be identified and expressed.
[0068] Genes encoding a
Polistinae venom enzyme can be isolated from a suitable library by screening with a probe. Useful
probes for isolating a
Polistinae venom enzyme gene can be generated from the sequence information provided herein.
[0069] An expression library can be constructed by methods known in the art. Preferably,
a cDNA library is prepared from cells or tissues that express a
Polistinae venom enzyme,
i.e., cells from the poison gland located near the venom sac. Sometimes the poison gland
is referred to as the acid gland. For example, mRNA or total RNA can be isolated,
cDNA is made and ligated into an expression vector (
e.g., a plasmid or bacteriophage derivative) such that it is capable of being expressed
by the host cell into which it is then introduced. Various screening assays can then
be used to select for the positive clones. For example, PCR with appropriate primers,
which can be synthesized based on the sequences provided herein, can be used. PCR
is preferred as the amplified production can be directly detected, e.g., by ethydium
bromide staining. Alternatively, labeled probes derived from the nucleic acid sequences
of the instant application can be used to screen the colonies. Although the poison
(acid) gland can be difficult to isolate, and the quantity of mRNA problematic, specific
PCR based on primers of the present invention can overcome these problems by permitting
specific amplification of trace amounts of mRNA or cDNA or even genomic DNA.
[0070] Alternatively, the presence of the gene may be detected by assays based on the physical,
chemical, or immunological properties of its expressed product. For example, cDNA
clones, or DNA clones which hybrid-select the proper mRNAs, can be selected which
produce a protein that,
e.g., has similar or identical electrophoretic migration, isoelectric focusing behavior,
proteolytic digestion maps, or antigenic properties as known for a
Polistinae venom enzyme.
[0071] Some recombinant proteins expressed by bacteria,
e.g.,Polistinae venom hyaluronidases, may react with antibodies specific for the native proteins.
Other bacterially expressed recombinant proteins, such as venom phospholipases, may
not react with antibodies specific for the native protein. Thus, in cases where the
recombinant proteins are immunoreactive, it is possible to select for positive clones
by immunoblot. However, bacterially expressed eukaryotic proteins may not fold in
an active conformation.
[0072] Generally, according to the present invention, any method of screening for positive
clones can be used.
[0073] Alternatives to isolating the
Polistinae venom enzyme genomic DNA or cDNA include, but are not limited to, chemically synthesizing
the gene sequence itself from the sequence provided herein.
[0074] The above methods are not meant to limit the methods by which clones of a
Polistinae venom enzyme may be obtained.
[0075] A large number of vector-host systems known in the art may be used. Possible vectors
include, but are not limited to, plasmids or modified viruses, but the vector system
must be compatible with the host cell used. Such vectors include, but are not limited
to, bacteriophages such as lambda derivatives, or plasmids such as various pBR322
derivatives, for example, pUC, CR, pGEX vectors; pmal-c, pFLAG, etc. The insertion
into a cloning vector can, for example, be accomplished by ligating the DNA fragment
into a cloning vector which has complementary cohesive termini. In a preferred aspect
of the invention, the PCR amplified nucleic acid molecules of the invention contain
3'-overhanging A-nucleotides, and can be used directly for cloning into a pCR vector
with compatible T-nucleotide overhangs (Invitrogen Corp., San Diego, CA). However,
if the complementary restriction sites used to fragment the DNA are not present in
the cloning vector, the ends of the DNA molecules may be enzymatically modified. Alternatively,
any site desired may be produced by ligating nucleotide sequences (linkers) onto the
DNA termini; these ligated linkers may comprise specific chemically synthesized oligonucleotides
encoding restriction endonuclease recognition sequences. In an alternative method,
the cleaved vector and a
Polistinae venom enzyme gene may be modified by homopolymeric tailing. Recombinant molecules
can be introduced into host cells via transformation, transfection, infection, electroporation,
etc., so that many copies of the gene sequence are generated.
[0076] In specific embodiments, transformation of host cells with recombinant DNA molecules
that incorporate the isolated
Polistinae venom enzyme gene, cDNA, or synthesized DNA sequence enables generation of multiple
copies of the gene. Thus, the gene may be obtained in large quantities by growing
transformants, isolating the recombinant DNA molecules from the transformants and,
when necessary, retrieving the inserted gene from the isolated recombinant DNA.
Expression of a Polistinae Venom Allergen Polypeptide or Fragment
[0077] As pointed out above, the isolated nucleic acids encoding
Polistinae venom enzymes, particularly
Polistes venom proteins, contain unexpected sequences that should be absent for the cDNA to
encode a protein similar to other
Polistinae venom enzymes,
e.g., as described in
U.S. Patent No. 5,593,877. In one embodiment, the "intron"-containing nucleic acids are expressed without further
modification. In another embodiment, the nucleic acids are modified using the techniques
described herein and exemplified
infra, or as described in the references cited above, such as Sambrook
et. al., to produce a protein having an amino acid sequence of a native
Polistinae venom enzyme (though, as discussed below, such a protein may have a different secondary
or tertiary structure, or include other polypeptide sequences fused to it).
[0078] The nucleotide sequence coding for a
Polistinae venom enzyme, or an immunomodulatory fragment, derivative or analog thereof, can
be inserted into an appropriate expression vector,
i.e., a vector which contains the necessary elements for the transcription and translation
of the inserted protein-coding sequence. Such elements are termed herein a "promoter."
Thus, the nucleic acid molecule encoding the
Polistinae venom enzyme is operationally associated with the promoter. An expression vector
also preferably includes a replication origin. The necessary transcriptional and translational
signals can also be supplied by the native gene encoding a
Polistinae venom enzyme and/or its flanking regions. Potential host-vector systems include but
are not limited to mammalian cell systems infected with virus (
e.g., vaccinia virus, adenovirus, etc.); insect cell systems infected with virus (
e.g., baculovirus); microorganisms such as yeast containing yeast vectors; or bacteria
transformed with bacteriophage, DNA, plasmid DNA, or cosmid DNA. The expression elements
of vectors vary in their strengths and specificities. Depending on the host-vector
system utilized, any one of a number of suitable transcription and translation elements
may be used.
[0079] In an alternative embodiment, a recombinant
Polistinae venom enzyme of the invention, or an immunomodulatory fragment, or variants thereof
encoding a hyaluronidase having the activity of the hyaluronidase of SEQ. ID. N.4.
is expressed chromosomally, after integration of the
Polistinae venom enzyme coding sequence by recombination. In this regard, any of a number of
amplification systems may be used to achieve high levels of stable gene expression
(
See, Sambrook
et al., 1989,
supra, at Section 16.28).
[0080] The cell into which the recombinant vector comprising the nucleic acid molecule encoding
the
Polistinae venom enzyme is cultured in an appropriate cell culture medium under conditions that
provide for expression of the
Polistinae venom enzyme by the cell. The expressed
Polistinae venom enzyme can then be recovered from the culture according to methods well known
in the art. Such methods are described in detail,
infra.
[0081] In a another embodiment, a
Polistinae venom enzyme-fusion protein can be expressed. A
Polistinae venom enzyme-fusion protein comprises at least a functionally active portion of a
non-
Polistinae venom enzyme protein joined via a peptide bond to at least an immunomodulatory portion
of a
Polistinae venom enzyme. The non
-Polistinae venom enzyme sequences can be amino- or carboxyl-terminal to the
Polistinae venom enzyme sequences. A recombinant DNA molecule encoding such a fusion protein
comprises a sequence encoding at least a functionally active portion of a non
-Polistinae venom enzyme joined in-frame to the coding sequence for a
Polistinae venom enzyme. It may encode a cleavage site for a specific protease,
e.g., Factor Xa, preferably at the juncture of the two proteins.
[0082] In another specific embodiment, a fragment of the
Polistinae venom enzyme is expressed as a free (non-fusion) protein.
[0083] In another embodiment, a periplasmic form of the fusion protein (containing a signal
sequence) can be produced for export of the protein to the
Escherichia coli periplasm. Export to the periplasm can promote proper folding of the expressed protein.
[0084] Any of the methods previously described in Patent No.
5,593,877 for the insertion of DNA fragments into a vector may be used to construct expression
vectors containing a gene consisting of appropriate transcriptional/translational
control signals and the protein coding sequences. These methods may include
in vitro recombinant DNA and synthetic techniques and
in vivo recombinants (genetic recombination). Expression of nucleic acid sequence encoding
a
Polistinae venom enzyme, or an immunomodulatory fragment thereof, may be regulated by a second
nucleic acid sequence so that the
Polistinae venom enzyme protein or peptide is expressed in a host transformed with the recombinant
DNA molecule. For example, expression of a
Polistinae venom enzyme protein may be controlled by any promoter/enhancer element known in
the art, but these regulatory elements must be functional in the host selected for
expression. Promoters which may be used to control
Polistinae venom enzyme gene expression include, but are not limited to, the CMV immediate early
promoter, the SV40 early promoter region (
Benoist and Chambon, 1981, Nature 290:304-310), the promoter contained in the 3' long terminal repeat of Rous sarcoma virus (
Yamamoto, et al., 1980, Cell 22:787-797), the herpes thymidine kinase promoter (
Wagner et al., 1981, Proc. Natl. Acad. Sci. U.S.A. 78:1441-1445), the regulatory sequences of the metallothionein gene (
Brinster et al., 1982, Nature 296:39-42); prokaryotic expression vectors such as the β-lactamase promoter (
Villa-Kamaroff, et al., 1978, Proc. Natl. Acad. Sci. U.S.A. 75:3727-3731), or the
tac promoter (
DeBoer, et al., 1983, Proc. Natl. Acad. Sci. U.S.A. 80:21-25); see also "
Useful proteins from recombinant bacteria" in Scientific American, 1980, 242:74-94; promoter elements from yeast or other fungi such as the Gal 4 promoter, the ADC
(alcohol dehydrogenase) promoter, PGK (phosphoglycerol kinase) promoter, alkaline
phosphatase promoter; and the animal transcriptional control regions, which exhibit
tissue specificity and have been utilized in transgenic animals.
[0085] Once a particular recombinant DNA molecule is identified and isolated, several methods
known in the art may be used to propagate it. Once a suitable host system and growth
conditions are established, recombinant expression vectors can be propagated and prepared
in quantity. As previously explained, the expression vectors which can be used include,
but are not limited to, the following vectors or their derivatives: human or animal
viruses such as vaccinia virus or adenovirus; insect viruses such as baculovirus;
yeast vectors; bacteriophage vectors (
e.g., lambda), and plasmid and cosmid DNA vectors, to name but a few.
[0086] In addition, a host cell strain may be chosen which modulates the expression of the
inserted sequences, or modifies and processes the gene product in the specific fashion
desired. Different host cells have characteristic and specific mechanisms for the
translational and post-translational processing and modification (
e.g., glycosylation, cleavage [
e.g., of signal sequence]) of proteins. Appropriate cell lines or host systems can be chosen
to ensure the desired modification and processing of the foreign protein expressed.
For example, expression in a bacterial system can be used to produce an nonglycosylated
core protein product. However, the enzyme protein expressed in bacteria may not be
properly folded. Expression in yeast can produce a glycosylated product. Expression
in insect cells can be used to increase the likelihood of "native" glycosylation and
folding of a heterologous
Polistinae venom enzyme. Furthermore, different vector/host expression systems may affect processing
reactions, such as proteolytic cleavages, to a different extent. It is interesting
to note that it has been observed that glycosylation and proper refolding are not
essential for immunomodulatory activity of a
Polistinae venom allergen since bacterial-produced allergen is active in a T cell proliferation
assay.
[0087] Vectors are introduced into the desired host cells by methods known in the art,
e.g., transfection, electroporation, electrotransfer, microinjection, transduction, cell
fusion, DEAE dextran, calcium phosphate precipitation, lipofection (lysosome fusion),
use of a gene gun, or a DNA vector transporter (see, e.g.,
Wu et al., 1992, J. Biol. Chem. 267:963-967;
Wu and Wu, 1988, J. Biol. Chem. 263:14621-14624;
Hartmut et al., Canadian Patent Application No. 2,012,311, filed March 15, 1990).
[0088] Preferred vectors, particularly for protein production
in vivo, are viral vectors, such as lentiviruses, retroviruses, herpes viruses, adenoviruses,
adeno-associated viruses, vaccinia viruses, baculoviruses, and other recombinant viruses
with desirable cellular tropism. Thus, a vector encoding a
Polistinae venom enzyme can be introduced
in vivo or
ex vivo using a viral vector or through direct introduction of DNA. Expression in targeted
tissues can be effected by targeting the transgenic vector to specific cells, such
as with a viral vector or a receptor ligand, or by using a tissue-specific promoter,
or both. Targeted gene delivery is described in
International Patent Publication WO 95/28494, published October 1995.
[0089] Viral vectors commonly used for
in vivo or
ex vivo targeting and expression procedures are DNA-based vectors and retroviral vectors.
Methods for constructing and using viral vectors are known in the art
(see, e.g., Miller and Rosman, BioTechniques, 7:980-990, 1992). Preferably, the viral vectors are replication defective, that is, they are unable
to replicate autonomously in the target cell. Preferably, the replication defective
virus is a minimal virus,
i.e., it retains only the sequences of its genome which are necessary for encapsidating
the genome to produce viral particles.
[0090] DNA viral vectors include an attenuated or defective DNA virus, such as but not limited
to herpes simplex virus (HSV), papillomavirus, Epstein Barr virus (EBV), adenovirus,
adeno-associated virus (AAV), vaccinia virus, and the like. Examples of particular
vectors include, but are not limited to, a defective herpes virus 1 (HSV1) vector
(
Kaplitt, et al., Molec. Cell. Neurosci. 2:320-330, 1991;
International Patent Publication No. WO 94/21807, published September 29, 1994;
International Patent Publication No. WO 92/05263, published April 2, 1994); an attenuated adenovirus vector, such as the vector described by
Stratford-Perricaudet, et al. (J. Clin. Invest. 90:626-630, 1992; see also
La Salle, et al., Science 259:988-990, 1993); and a defective adeno-associated virus vector (
Samulski, et al., J. Virol. 61:3096-3101, 1987;
Samulski, et al., J. Virol. 63:3822-3828, 1989;
Lebkowski, et al., Mol. Cell. Biol. 8:3988-3996, 1988).
[0091] Various companies produce viral vectors commercially, including but by no means limited
to Avigen, Inc. (Alameda, CA; AAV vectors), Cell Genesys (Foster City, CA; retroviral,
adenoviral, AAV vectors, and lentiviral vectors), Clontech (retroviral and baculoviral
vectors), Genovo, Inc. (Sharon Hill, PA; adenoviral and AAV vectors), Genvec (adenoviral
vectors), IntroGene (Leiden, Netherlands; adenoviral vectors), Molecular Medicine
(retroviral, adenoviral, AAV, and herpes viral vectors), Norgen (adenoviral vectors),
Oxford BioMedica (Oxford, United Kingdom; lentiviral vectors), and Transgene (Strasbourg,
France; adenoviral, vaccinia, retroviral, and lentiviral vectors).
[0092] In another embodiment, the vector can be introduced
in vivo by lipofection, as naked DNA, or with other transfection facilitating agents (peptides,
polymers, etc.). Synthetic cationic lipids can be used to prepare liposomes for
in vivo transfection of a gene encoding a marker (
Felgner, et. al., Proc. Natl. Acad. Sci. U.S.A. 84:7413-7417, 1987;
Felgner and Ringold, Science 337:387-388, 1989; see
Mackey, et al., Proc. Natl. Acad. Sci. U.S.A. 85:8027-8031, 1988;
Ulmer, et al., Science 259:1745-1748, 1993). Useful lipid compounds and compositions for transfer of nucleic acids are described
in
International Patent Publications WO95/18863 and
WO96/17823, and in
U.S. Patent No. 5,459,127. Lipids may be chemically coupled to other molecules for the purpose of targeting
(see Mackey,
et al., supra)
. Targeted peptides,
e.g., hormones or neurotransmitters, and proteins such as antibodies, or non-peptide
molecules could be coupled to liposomes chemically.
[0094] Alternatively, non-viral DNA vectors for gene therapy can be introduced into the
desired host cells by methods known in the art,
e.g., electroporation, microinjection, cell fusion, DEAE dextran, calcium phosphate precipitation,
use of a gene gun (ballistic transfection; see,
e.g., U.S. Pat. No. 5,204,253,
U.S. Pat. No. 5,853,663,
U.S. Pat. No. 5,885,795, and
U.S. Pat. No. 5,702,384 and see
Sanford, TIB-TECH, 6:299-302, 1988;
Fynan et al., Proc. Natl. Acad. Sci. U.S.A., 90:11478-11482, 1993; and
Yang et al., Proc. Natl. Acad. Sci. U.S.A., 87:1568-9572, 1990), or use of a DNA vector transporter (see,
e.g.,
Wu, et al., J. Biol. Chem. 267:963-967, 1992;
Wu and Wu, J. Biol. Chem. 263:14621-14624, 1988;
Hartmut, et al., Canadian Patent Application No. 2,012,311, filed March 15, 1990;
Williams, et al., Proc. Natl. Acad. Sci. USA 88:2726-2730, 1991). Receptor-mediated DNA delivery approaches can also be used (
Curiel, et al., Hum. Gene Ther. 3:147-154, 1992;
Wu and Wu, J. Biol. Chem. 262:4429-4432, 1987).
US Patent Nos. 5,580,859 and
5,589,466 disclose delivery of exogenous DNA sequences, free of transfection facilitating agents,
in a mammal. Recently, a relatively low voltage, high efficiency
in vivo DNA transfer technique, termed electrotransfer, has been described (
Mir, et al., C.P. Acad. Sci., 321:893, 1998;
WO 99/01157;
WO 99/01158;
WO 99/01175).
[0095] Both cDNA and genomic sequences can be cloned and expressed.
[0096] It is further contemplated that the
Polistinae venom enzymes of the present invention, or variants thereof encoding a hyaluronidase
having the activity hyaluronidase of SEQ ID N.4, or immunomodulatory fragments thereof
can be prepared synthetically,
e.g., by solid phase peptide synthesis.
Isolation and Purification
[0097] Once the recombinant
Polistinae venom enzyme protein is identified, it may be isolated and purified by standard methods
including chromatography (
e.g., ion exchange, affinity, and sizing column chromatography), centrifugation, differential
solubility, or by any other standard technique for the purification of proteins.
[0098] In a particular embodiment, a
Polistinae venom enzyme and fragments thereof can be engineered to include about six histidyl
residues, which makes possible the selective isolation of the recombinant protein
on a Ni-chelation column. In a preferred aspect, the proteins are further purified
by reverse phase chromatography.
[0099] In another embodiment, in which recombinant
Polistinae venom enzyme is expressed as a fusion protein, the non
-Polistinae venom enzyme portion of the fusion protein can be targeted for affinity purification.
For example, antibody specific for the non-
Polistinae venom enzyme portion of the fusion protein can be immobilized on a solid support,
e.g., cyanogen bromide-activated Sepharose, and used to purify the fusion protein. In
another embodiment, a binding partner of the non-
Polistinae venom enzyme portion of the fusion protein, such as a receptor or ligand, can be
immobilized and used to affinity purify the fusion protein.
[0100] In one embodiment, a
Polistinae venom enzyme-fusion protein, preferably purified, is used without further modification,
i.e., without cleaving or otherwise removing the non-
Polistinae venom enzyme-portion of the fusion protein. In a preferred embodiment, the
Polistinae venom enzyme-fusion protein can be used therapeutically,
e.g., to modulate an immune response.
[0101] In a further embodiment, the purified fusion protein is treated to cleave the non-
Polistinae venom enzyme protein or portion thereof from the
Polistinae venom enzyme. For example, where the fusion protein has been prepared to include
a protease sensitive cleavage site, the fusion protein can be treated with the protease
to cleave the protease specific site and release
Polistinae venom enzyme.
[0102] In a particular embodiment of the present invention, such recombinant
Polistinae venom enzymes include but certainly are not limited to those containing, as a primary
amino acid sequence, all or part of the amino acid sequence substantially as depicted
in Figure 4 (SEQ ID NO:4), as well as variants thereof having the activity of the
hyaluronidase of SEQ ID N 4.
Derivatives and Analogs of Polistinae Venom Enzymes
[0103] The production and use of derivatives and analogs related to
Polistinae venom enzymes are immunomodulatory,
i.e., capable of modulating an antigen-specific immune response. Moreover, analogs or derivatives
of Polistinae venom enzymes, particularly and hyaluronidase from
Polistes annularis, can also be used to treat immune system related diseases or disorders, or a symptom
related thereto. The derivative or analog can bind to a
Polistinae venom enzyme-specific immunoglobulin, including IgG and IgE. Derivatives or analogs
of
Polistinae venom enzyme can be tested for the desired immunomodulatory activity by procedures
known in the art, including but not limited to the assays described
infra.
[0104] In particular,
Polistinae venom enzyme derivatives can be made by altering the nucleic acid sequences of the
invention by substitutions, additions or deletions. Due to the degeneracy of nucleotide
coding sequences, other DNA sequences which encode substantially the same amino acid
sequence as a nucleic acid encoding a
Polistinae venom enzyme may be used in the practice of the present invention. These include
but are not limited to nucleotide sequences comprising all or portions of a gene encoding
the
Polistinae venom enzyme that are altered by the substitution of different codons that encode
the same amino acid residue within the sequence, thus producing a silent change. Likewise,
derivatives include, but are not limited to, those containing, as a primary amino
acid sequence, all or part of the amino acid sequence of a
Polistinae venom enzyme, including altered sequences in which functionally equivalent amino
acid residues are substituted for residues within the sequence resulting in a conservative
amino acid substitution. For example, one or more amino acid residues within the sequence
can be substituted by another amino acid of a similar polarity which acts as a functional
equivalent, resulting in a silent alteration. Substitutes for an amino acid within
the sequence may be selected from other members of the class to which the amino acid
belongs. For example, the nonpolar (hydrophobic) amino acids include alanine, leucine,
isoleucine, valine, proline, phenylalanine, tryptophan and methionine. The polar neutral
amino acids include glycine, serine, threonine, cysteine, tyrosine, asparagine, and
glutamine. The positively charged (basic) amino acids include arginine, lysine and
histidine. The negatively charged (acidic) amino acids include aspartic acid and glutamic
acid.
[0105] Derivatives or analogs of
Polistinae venom enzyme include but are not limited to those which are substantially homologous
to a
Polistinae venom enzyme or fragments thereof, or whose encoding nucleic acid is capable of hybridizing
to a nucleic acid molecule encoding a
Polistinae venom enzyme. Hybridization can occur under moderately stringent to highly stringent
conditions, depending on the degree of sequence similarity, as is well known in the
art.
[0106] Derivatives and analogs can be produced by various methods known in the art. The
manipulations which result in their production can occur at the gene or protein level.
For example, the nucleic acid sequence of the cloned
Polistinae venom enzyme can be modified by any of numerous strategies known in the art (
Maniatis, T., 1990, Molecular Cloning, A Laboratory Manual, 2d ed., Cold Spring Harbor
Laboratory, Cold Spring Harbor, New York). The sequence can be cleaved at appropriate sites with restriction endonuclease(s),
followed by further enzymatic modification if desired, isolated, and ligated
in vitro. In the production of the gene encoding a derivative or analog of a
Polistinae venom enzyme, care should be taken to ensure that the modified gene remains within
the same translational reading frame as
Polistinae venom enzyme, uninterrupted by translational stop signals.
[0107] Additionally, the gene encoding a
Polistinae venom enzyme can be mutated
in vitro or
in vivo, to create and/or destroy translation, initiation, and/or termination sequences, or
to create variations in coding regions and/or form new restriction endonuclease sites
or destroy preexisting ones, to facilitate further
in vitro modification. Any technique for mutagenesis known in the art can be used, including
but not limited to,
in vitro site-directed mutagenesis (
Hutchinson, C., et al., 1978, J. Biol. Chem. 253:6551;
Zoller and Smith, 1984, DNA 3:479-488;
Oliphant et al., 1986, Gene 44:177;
Hutchinson et al., 1986, Proc. Natl. Acad. Sci. U.S.A. 83:710), use of TAB® linkers (Phannacia), etc. PCR techniques are preferred for site directed
mutagenesis (see
Higuchi, 1989, "Using PCR to Engineer DNA", in PCR Technology: Principles and Applications
for DNA Amplification, H. Erlich, ed., Stockton Press, Chapter 6, pp. 61-70).
[0108] Manipulations of the recombinant
Polistinae venom enzyme may also be made at the protein level. Recombinant
Polistinae venom enzyme fragments or other derivatives or analogs which are differentially modified
during or after translation,
e.g., by glycosylation, acetylation, phosphorylation, amidation, reduction and carboxymethylation,
derivatization by known protecting/blocking groups, proteolytic cleavage, linkage
to an antibody molecule or other cellular ligand, etc. can be prepared. Any of numerous
chemical modifications may be carried out by known techniques, including but not limited
to specific chemical cleavage by cyanogen bromide, trypsin, chymotrypsin, papain,
V8 protease, NaBH
4; acetylation, formylation, oxidation, reduction; metabolic synthesis in the presence
of tunicamycin; etc.
[0109] In a particular embodiment, the
Polistinae venom enzyme or immunomodulatory fragment thereof is expressed in an insect cell
expression system,
e.g., using a baculovirus expression vector. As pointed out above, this should yield
"native" glycosylation and structure, particularly secondary and tertiary structure,
of the expressed polypeptide. Native glycosylation and structure of the expressed
polypeptide may be very important for diagnostic uses, since the enzyme specific antibodies
detected in diagnostic assays will be specific for the native enzyme,
i.e., as introduced by a sting from a vespid.
Activity Assays With Peptides of the Invention
[0110] Numerous assays are known in immunology for evaluating the immunomodulatory activity
of an antigen. For example, the
Polistinae venom enzyme proteins produced by expression of the nucleic acid molecules of the
invention can be used in diagnostic assays for allergic diseases, which are described
in detail,
infra. In general, such proteins can be tested for the ability to bind to antibodies specific
for the enzyme. Preferably, such antibodies that are detected in the diagnostic assay
are of the IgE class. However, it is important to note that natural allergen-specific
antibodies have been found to bind weakly to denatured vespid venom allergens.
Polistinae venom enzymes produced in eukaryotic expression systems, and particularly insect
cell expression systems, may have the correct structure for antibody binding.
Polistinae venom enzymes expressed in bacterial expression systems may not, and would thus require
refolding prior to use in a diagnostic assay for antibody binding.
[0111] In another embodiment, the proteins of the invention can be tested in a proliferation
assay for T cell responses. For such T cell response assays, the expression system
used to produce the enzyme does not appear to affect the immunomodulatory activity
of the protein. Generally, lymphocytes from a sensitized host are obtained. The host
can be a mouse that has been immunized with a
Polistinae venom enzyme, such as a
Polistinae venom hyaluronidase that has been produced recombinantly according to the present
invention.
[0112] In a preferred embodiment, peripheral blood leukocytes are obtained from a human
who is sensitive to vespid venom. Using techniques that are well known in the art,
T lymphocyte response to the protein can be measured
in vitro. In a specific embodiment,
infra, T cell responses are detected by measuring incorporation of
3H-thymidine, which increases with DNA synthesis associated with proliferation.
[0114] Similarly, lymphokine production assays can be practiced according to the present
invention. In one embodiment, lymphokine production can be assayed using immunological
or co-stimulation assays (see,
e.g.,
Fehlner et al., 1991, J. Immunol. 146:799) or using the ELISPOT technique (
Czerkinsky, et al., 1988, J. Immunol. Methods 110:29). Alternatively, mRNA for lymphokines can be detected,
e.g., by amplification (see
Brenner, et al., 1989, Biotechniques 7:1096) or
in situ hybridization (see,
e.g., Kasaian and Biron, 1989, J. Immunol. 142:1287). Of particular interest are those individuals whose T cells produce lymphokines
associated with IgE isotype switch events,
e.g., IL-4 and IL-5 (
Purkeson and Isakson, 1992, J. Exp. Med. 175:973-982). Also of interest are the polypeptide fragments of the
Polistinae venom enzyme that contain epitopes recognized by T cells involved in IgE switch events.
[0115] Thus, in a preferred aspect, the proteins produced according to the present invention
can be used in
in vitro assays with peripheral blood lymphocytes or, more preferably, cell lines derived
from peripheral blood lymphocytes, obtained from vespid venom enzyme sensitive individuals
to detect secretion of lymphokines ordinarily associated with allergic responses,
e.g., IL-4. Such assays may indicate which venom component or components are responsible
for the allergic condition. More importantly, the fragments of the
Polistinae venom enzyme can be tested. In this way, specific epitopes responsible for T cell
responses associated with allergic response can be identified. The sequences of such
epitopes can be compared to other vespid venom enzymes and to environmental or autologous
proteins to determine if there are sequence similarities that suggest possible cross-reactivity.
The peptides can be tested for the ability to induce T cell anergy,
e.g., by mega-dose administration, modification to produce an epitope antagonist, administration
in the absence of the appropriate costimulatory signals, and other methods thought
to result in T cell anergy. Peptides containing such epitopes are ideal candidates
for therapeutics.
[0116] In a further embodiment, the polypeptide of the invention can be used directly in
assays to detect the extent of cross-reactivity with other environmental proteins
and/or homologous proteins, with which they share sequence similarity. In particular,
the fragments of the
Polistinae venom enzymes that have sequence similarity with such environmental, and more particularly,
homologous proteins can be evaluated for cross reactivity with antibodies or T cell
specific for such proteins. In another specific embodiment, the cross reactivity of
Polistinae venom hyaluronidase with the sperm membrane protein PH-20 is evaluated.
Diagnostic and Therapeutic Uses of the Polistinae Venom Enzyme Polypeptides
[0117] The present invention provides a plentiful source of a pure
Polistinae venom enzyme, produced by recombinant techniques. Alternatively, given the sequence
information provided by the present invention, polypeptide fragments, derivatives
or analogs of the
Polistinae venom enzymes can advantageously be produced by peptide synthesis.
[0118] The invention contemplates use of
Polistinae venom enzymes, or immunomodulatory fragments, or variants having the activity of
the hyaluronidase of SEQ ID N.4 for the preparation of diagnostic or therapeutic compositions,
for the use in the diagnosis and therapy of vespid venom allergen-specific allergic
conditions, treating vespid venom allergen-specific allergic conditions, treating
immune system related conditions, and modulating immune response in a mammal against
an immunogen. In particular, Polistes hyaluronidase, in particular
Pol a hyaluronidase, or immunomodulatory fragments, variants having the activity of the
hyaluronidase of SEQ ID N.4, are contemplated for use in diagnosis, therapy, treatment,
and modulation of immune response according to the present invention.
Diagnostic Methods
[0119] As use herein, the term diagnostic includes
in vitro and
in vivo diagnostic assays. Generally, such assays are designed to measure the activity of
IgE antibodies specific for a given allergen. Such diagnostic assays depend heavily
on the availability of pure allergen. This is especially true for determining sensitivity
to a specific allergen component of a vespid venom.
In vitro diagnostic assays for enzyme sensitivity include radioimmunoassay (RIA), immunoradiometric
immunoassay (IRMA), radio-allergosorbent tests (RAST), enzyme-linked immunosorbent
assay (ELISA), ELISPOT, magnetic allergosorbent assay, immunoblots, histamine release
assays, and the like.
[0120] Further one can determine the presence of epitopes that are predominantly reactive
with IgE antibodies, or with other isotypes,
e.g., IgG. Such epitopes may overlap or be distinct. In particular, fragments of the
Polistinae venom enzymes of the invention can be used to identify such specific B cell epitopes.
Identification of specific epitopes can provide a basis for developing therapies,
as described
infra.
[0121] Furthermore, one can use
in vitro diagnostic assays on peripheral blood lymphocytes, as described
supra. Such diagnostic assays can give detailed information about the enzyme-specific T
cell responses, the phenotype of the T cell response, and preferably the T cell epitope
of the enzyme involved in T cell responses. The immunodominant epitope and the epitope
involved in IgE isotype class switch events can be detected, if they are not the same.
In particular, the T cell epitopes of
Polistinae venom enzymes that stimulate proliferation and/or lymphokine secretion of T cells
of a phenotype associated with IgE isotype class switching events can be identified
for a specific individual, or for a class of individuals who share MHC haplotype or
a predominant T cell receptor variable region expression, or both.
[0122] In vivo assays for allergenicity generally consist of skin prick sensitivity assays, in which
serially diluted amounts of an allergen are administered either subcutaneously or
intradermally into a patient's skin, and wheel and erythema reactions are detected.
As with
in vitro assays, the availability of pure venom enzyme greatly increases the value of the
results of the
in vivo diagnostic assays since cross-reactivity with impurities in extracts prepared from
vespid venom sacs can be avoided.
Therapeutic Methods
[0123] Therapeutic compositions of the invention (see,
infra) can be used in immunotherapy, also referred to as hyposensitization therapy. Immunotherapy
has proven effective in allergic diseases, particular insect allergy. Allergens are
administered parenterally over a long period of time in gradually increasing doses.
Such therapy may be particularly effective when the allergen or allergens to which
the patient is sensitive have been specifically identified and the therapy is targeted
to those allergen(s). Thus, the availability of pure
Polistinae venom enzyme in large quantities is important for immunotherapy of allergy.
[0124] In another embodiment, the present invention contemplates use of polypeptides comprising
at least an immunomodulatory T cell epitope of a
Polistinae venom enzyme to induce specific T cell allergy to a vespid venom enzyme. Identification
of such peptides is described
supra. More preferably, a peptide comprising such a T cell epitope and lacking a B cell
epitope can be administered to a patient. The presence of B cell epitopes on an allergen
can cause an undesirable systemic reaction when the allergen is used for immunotherapy.
Thus, a particular advantage of the invention is the capability to provide allergen
polypeptides that do not cause undesirable systemic effects.
[0126] In another embodiment, one or more polypeptide fragments can be administered intranasally
to suppress allergen-specific responses in naive and sensitized subjects (see
e.g.,
Hoyne et al., 1993, J. Exp. Med. 178:1783-88).
[0127] Administration of a
Polistinae venom enzyme peptide of the invention is expected to induce anergy, resulting in
cessation of allergen-specific antibody production or allergen-specific T cell response,
or both, and thus, have a therapeutic effect.
[0128] In a preferred aspect of the invention, peptide based therapy to induce T cell anergy
is customized for each individual or a group of individuals. Using the diagnostic
methods of the present invention, the specific T cell epitope or epitopes of a vespid
venom enzyme involved in the allergic response can be identified. Peptides comprising
these epitopes can then be used in an individualized immunotherapy regimen.
Treatment of Immune System Related Diseases or Disorders, or a Symptom Related Thereto
[0129] As explained above, the present invention relates to polypeptides for treating immune
system related diseases or disorders, or for modulating immune response in a mammal
towards an immunogen, wherein the polypeptides are encoded by isolated nucleic acid
molecules which encode
Polistinae venom enzymes, such hyaluronidase from
Polistes annularis. In particular, components of vespid venom, particularly hyaluronidase, have applications
in modulating a subject's immune response to various immunogens, such as pathogens
and viruses, to name only a few. In a particular embodiment, components of a
Polistinae venom, and particularly hyaluronidase from
Polistes annularis and conserved variants thereof, fragments thereof, or analogs or derivatives thereof
modulate a subject's immune system to have increased ability to combat pathogens and
viruses including, but not limited to, HIV, Herpes Simplex virus, or papilloma virus.
In a specific embodiment, such a method comprises administering to a subject a therapeutically
effective amount of a pharmaceutical composition comprising a polypeptide encoded
by an isolated nucleic acid molecule comprising a DNA sequence of SEQ ID NO 3, variants
thereof, encoding a hyaluronidase having the activity of the hyaluronidase of SEQ
ID N 4 immunomodulatory fragments thereof, or an isolated nucleic acid molecule hybridizable
thereto, wherein the polypeptide comprises an antigenic portion of a B cell epitope
or an immunomodulatory portion of a T cell epitope
of Polistes annularis hyaluronidase.
[0130] Furthermore, it has been discovered that components of
Polistinae venom, such hyaluronidase of
Polistes annularis, also have applications in treating an immune system related disease or disorder,
or a symptom related thereto. As used herein, the phrase "immune system related disease
or disorder" refers to a disease or disorder which evokes an immune response in a
subject, or effects the ability of the immune system to respond to an immunogen. Examples
of immune system related diseases or disorders which can be treated with agents and
pharmaceutical compositions of the invention include, but are not limited to, a pathogenic
disease or disorder; a viral disease or disorder, e.g. HIV, Herpes Simplex virus,
or papilloma virus; or an autoimmune disease, e.g. arthritis or Lupus. Hence, the
present invention encompasses agents for treating an immune system related disease
or disorder, or a symptom related thereto, in a specific embodiment comprising an
isolated polypeptide encoded by an isolated nucleic acid molecule comprising a DNA
sequence of SEQ ID NO 3, variants thereof, encoding a hyaluronidase having the activity
of hyaluronidase of SEQ ID.N.4 immunomodulatory fragments thereof, wherein the isolated
polypeptide comprises an immunomodulatory portion of a T cell epitope or an antigenic
portion of a B cell epitope of
Polistes annularis hyaluronidase.
[0131] Hence, naturally, the present invention extends to pharmaceutical compositions for
treating an immune system related disease or disorder, comprising a
Polistinae venom enzyme, or variants thereof, having the activity of the hyaluronidase of SEQ
ID N4 or immunomodulatory fragments thereof. Moreover, the present invention extends
to a method for treating an immune system related disease or disorder, or a symptom
related thereto, comprising administering a therapeutically effective amount of a
pharmaceutical composition for treating an immune system related disease or disorder
to a subject. The phrase "therapeutically effective amount" is used herein to mean
an amount sufficient to treat, and preferably increase by at least about 30 percent,
more preferably by at least 50 percent; most preferably by at least 90 percent, the
ability of the immune system of a subject to combat effectively an immunogen. As further
studies are conducted, information will emerge regarding appropriate dosage levels
for modulation of immune system response towards an immunogen in various patients,
and the ordinary skilled worker, considering the therapeutic context, age and general
health of the recipient, will be able to ascertain proper dosing. Delivery can be
of the protein or a gene therapy vector. Hence, for example, should the immune system
related disease or disorder involve HIV, a clinically significant change would, for
example, involve an increase in white blood cell count in a subject to whom a pharmaceutical
composition of the invention is administered relative to white blood cell count prior
to administration. Other such examples of monitoring a clinically significant change
in a subject will be readily apparent to one of ordinary skill in the art. Furthermore,
as further studies are conducted, information will emerge regarding appropriate dosage
levels for treating an immune system related disease or disorder, or a symptom related
thereto in various patients, and the ordinary skilled worker, considering the therapeutic
context, age and general health of the recipient, will be able to ascertain proper
dosing. Examples of pharmaceutically acceptable compositions are described
infra.
Pharmaceutically Acceptable Compositions
[0132] The
in vivo diagnostic or therapeutic compositions of the invention may also contain appropriate
pharmaceutically acceptable carriers, excipients, diluents and adjuvants. As used
herein, the phrase "pharmaceutically acceptable" preferably means approved by a regulatory
agency of a government, in particular the Federal government or a state government,
or listed in the U.S. Pharmacopeia or another generally recognized pharmacopeia for
use in animals, and more particularly in humans. Suitable pharmaceutical carriers
are described in "Remington's Pharmaceutical Sciences" by E.W. Martin.
[0133] Such pharmaceutically acceptable carriers can be sterile liquids, such as water and
oils, including those of petroleum, animal, vegetable or synthetic origin, such as
peanut oil, soybean oil, mineral oil, sesame oil and the like. Water is a preferred
carrier when the pharmaceutical composition is administered intravenously. Saline
solutions and aqueous dextrose and glycerol solutions can also be employed as liquid
carriers, particularly for injectable solutions. Suitable pharmaceutical excipients
include mannitol, human serum albumin (HSA), starch, glucose, lactose, sucrose, gelatin,
malt, rice, flour, chalk, silica gel, magnesium carbonate, magnesium stearate, sodium
stearate, glycerol monostearate, talc, sodium chloride, dried skim milk, glycerol,
propylene, glycol, water, ethanol and the like. These compositions can take the form
of solutions, suspensions, tablets, pills, capsules, powders, sustained-release formulations
and the like.
[0134] Such compositions will contain an effective diagnostic or therapeutic amount of the
active compound together with a suitable amount of carrier so as to provide the form
for proper administration to the patient. While intravenous injection is a very effective
form of administration, other modes can be employed, such as by injection, or by oral,
nasal or parenteral administration.
[0135] The invention will be further clarified by the following examples, example 1 not
being part of this invention.
EXAMPLE 1: PAPER WASP PHOSPHOLIPASE
[0136] Based, in part, on the methods and disclosure of
U.S. Patent No. 5,593,877, nucleic acids encoding
Pol a (paper wasp) phospholipase were obtained. However, these nucleic acids surprisingly
include internal sequences that do not code for an amino acid sequence found as expected
on the native protein. Although the nucleic acids described in this Example are cDNAs,
and are not genomic, they appear to include "introns".
MATERIALS AND METHODS
Results
[0138] When examining paper wasp phospholipase A, cDNA produced with RACE, it was observed
that its length was longer than necessary to encode paper wasp phospholipase A, protein.
It was discovered that, surprisingly, this augmented length was the result introns
incorporated into the paper wasp phospholipase A
1 cDNA. Such a discovery was unexpected in light of studies conducted on the cDNAs
of other vespid venoms, which invariably do not contain any introns. For example,
the phospholipase cDNAs of yellowjacket and hornet contain no such introns.
[0139] Because of this major unforeseen difference between paper wasp phospholipase A
1 cDNA and other vespid venom phospholipase cDNAs, special biotechniques and steps
were required to isolate paper wasp phospholipase A
1 cDNA, which were not needed to obtain the venom phospholipase cDNA from other vespids,
such as hornet and yellowjacket. In particular, in order to isolate the cDNA sequence
encoding phospholipase A
1 for paper wasp, it was necessary to determine the size and location and number of
introns.
[0140] Using the amino acid sequence derived from the cyanogen bromide degradation of paper
wasp phospholipase A
1, the genetic code, and the nucleotide sequence of wasp phospholipase cDNA derived
from the RACE protocol, two introns were discovered. The first intron, hereinafter
referred to as
"papla intron 1" comprises a nucleotide sequence as set forth in SEQ ID NO:5 (Figure 2A).
Papla intron 1 comprises 114 nucleotides, and is normally located between nucleotides 111 and 112
of the cDNA sequence encoding phospholipase A,, set forth In SEQ ID NO:1.
[0141] A second intron, hereinafter referred to as
"papla intron 2" was also discovered. This intron comprises a nucleotide sequence as set forth in
SEQ ID NO:6 (Figure 2B).
Papla intron 2 contains 127 nucleotides, and is normally located between nucleotides 720 and 721
of SEQ ID NO:1.
[0142] In order to isolate the cDNA sequence encoding paper wasp phospholipase A
1 (SEQ ID NO:1), these introns had to be removed from the paper wasp phospholipase
A
1 cDNA derived from RACE without disturbing the reading frame of the coding nucleotides.
In essence, paper wasp phospholipase A
1 cDNA had to be re-designed so that only encoding nucleotides would be included. This
re-design process was technically very difficult because, should one encoding nucleotide
be accidentally removed along with an intron, or should one non-coding nucleotide
not be removed, a reading frame shift would be produced which would result in mutations
and could cause premature termination of the expression of the cDNA.
[0143] In this re-design process, specially designed oligonucleotides were chemically synthesized,
each complementary to coding nucleotides located 5' and 3' of one of the introns.
The amplified paper wasp phospholipase A
1 cDNA derived from RACE was then cloned into a self-replicating plasmid. This plasmid
was denatured, and, under low stringency conditions, the oligonucleotides were permitted
to anneal to the paper wasp phospholipase A
1 cDNA, leaving the introns single stranded. These oligonucleotides then served as
primers for DNA synthesis, which generated a double stranded plasmid wherein the introns
were deleted from one of the strands. A cell was then transfected with the plasmid
using methods described above, and the cell was then cloned. Since one of the two
DNA strands in the original plasmid had the introns deleted, half of the transfected
cells contained a double stranded plasmid in which the introns had been removed. The
cloned were then screened to isolate the cells having the plasmid comprising paper
wasp cDNA comprising a DNA sequence of SEQ ID NO:9 (without introns). Copies of the
particular plasmid were then isolated and sequenced to confirm the deletion of the
introns. The re-designed paper wasp phospholipase A
1 cDNA was then removed from the particular plasmid, sequenced, amplified, and cloned
into an expression vector, using the procedures described in Example 1 and in Application
Serial No.
08/474,853 and in
U.S. Patent 5,593,877, which are hereby incorporated by reference in their entireties.
[0144] A comparison of the deduced amino acid sequence of paper wasp phospholipase A
1 (SEQ ID NO:2) with other vespid venom phospholipases was performed. In particular,
SEQ ID NO:2 was compared with phospholipase from white face hornet (
D.
maculata) (SEQ ID NO:7) and phospholipase from yellow jacket (
V. vulgaris) (SEQ ID NO:8). The results of this sequence comparison are shown in Figure 3.
EXAMPLE 2: PAPER WASP HYALURONIDASE
[0145] Using the procedures described in
U.S. Patent No. 5,593,877, the cDNA sequence encoding paper wasp (
Pol a) hyaluronidase (SEQ ID NO:3) and its corresponding amino acid sequence (SEQ ID NO:4)
were isolated and are set forth in Figure 4. Nucleotides 449 through 536 of SEQ ID
NO:3 encode a portion of a signal sequence. Hence, the amino acid residue at the N
terminus of mature
Pol a hyaluronidase is serine, which is encoded by nucleotides 536, 537, and 538.
[0146] Surprisingly, paper wasp hyaluronidase cDNA produced from the RACE protocol set forth
above had greater length than necessary to encode
Pol a hyaluronidase protein. Hence, it was concluded paper wasp hyaluronidase cDNA contained
at least one intron. The presence of the at least one intron within the wasp hyaluronidase
cDNA was unexpected in light of studies on hyaluronidase cDNA from other vespid venoms,
such as yellowjacket and hornet, which do not contain introns. As a result, special
biotechniques similar to those employed to isolate paper wasp phospholipase A
1 cDNA, and set forth in Example 1
supra, were required to isolate the cDNA encoding sequence of paper wasp hyaluronidase.
[0147] Initially, a determination was made as to the location and size of the introns within
the paper wasp hyaluronidase cDNA. Once the introns were located, they had to be removed
in such a manner as not to disturb any coding nucleotides. Hence, just as with paper
wasp phospholipase A
1 cDNA, it was necessary to re-design paper wasp hyaluronidase cDNA so that only encoding
nucleotides would be included. This re-design process was technically very difficult
because, should one encoding nucleotide be accidentally removed along with an intron,
or should one non-coding nucleotide not be removed, a missense frameshift mutation
would be placed into the wasp hyaluronidase cDNA.
[0148] The cDNA encoding mature paper wasp hyaluronidase (SEQ ID NO:3) was prepared using
procedure similar to that used to isolate the cDNA encoding paper wasp phospholipase
A
1 supra, The cDNA without introns was then sequenced, amplified, and cloned into an expression
vector, again using the procedures described above.
[0149] Paper wasp hyaluronidase cDNA was found to contain one intron. This intron, hereinafter
referred to as
"pahya", is 94 nucleotides long, and has a nucleotide sequence as set forth in SEQ ID NO:9
(Figure 5). Normally, this intron is located between nucleotides 733 and 734 of SEQ
ID NO:3.
[0150] A comparison of the amino acid sequence of paper wasp hyaluronidase (SEQ ID NO:4)
with other vespid venom phospholipases was performed. In particular, SEQ ID NO:4 was
compared with hyaluronidase from bee venom (SEQ ID NO:10), hyaluronidase from white
face hornet (
D. maculata) (SEQ ID NO:11) and hyaluronidase from yellowjacket (
V. vulgaris) (SEQ ID NO:12). The results of this sequence comparison are shown in Figure 6.
SEQUENCE LISTING
[0151]
<110> King, Te Piao
<120> CLONING AND RECOMBINANT PRODUCTION OF VESPID VENOM ENZYMES, SUCH AS PHOSPHOLIPASE
AND HYALURONIDASE, AND IMMUNOLOGICAL THERAPIES BASED THEREON
<130> 2313/2F138
<140> Unassigned
<141> 1999-10-01
<160> 12
<170> FastSEQ for windows Version 3.0
<210> 1
<211> 1368
<212> PRT
<213> Polistes annularis
<400> 1




<210> 2
<211> 320
<212> PRT
<213> Polistes annularis
<400> 2


<210> 3
<211> 0
<212> PRT
<213> Polistes annularis
<400> 3



<210> 4
<211> 367
<212> PRT
<213> Polistes annularis
<400> 4


<210> 5
<211> 114
<212> DNA
<213> Polistes annularis
<400> 5

<210> 6
<211> 127
<212> DNA
<213> Polistes annularis
<400> 6

<210> 7
<211> 317
<212> PRT
<213> Dolichovespula maculata
<400> 7

<210> 8
<211> 300
<212> PRT
<213> Vespula vulgaris
<400> 8


<210> 9
<211> 94
<212> DNA
<213> Polistes annularis
<400> 9

<210> 10
<211> 343
<212> PRT
<213> Apis melliferis
<400> 10


<210> 11
<211> 331
<212> PRT
<213> Dolichovespula maculata
<400> 11


<210> 12
<211> 331
<212> PRT
<213> Vespula vulgaris
<400> 12


Annex to the application documents - subsequently filed sequences listing
SEQUENCE LISTING
[0152]
<110> King, Te Piao
<120> CLONING AND RECOMBINANT PRODUCTION OF VESPID VENOM ENZYMES, SUCH AS PHOSPHOLIPASE
AND HYALURONIDASE, AND IMMUNOLOGICAL THERAPIES BASED THEREON
<130> 2313/2F138-EP0
<140> EP 99950198.4
<141> 1999-10-01
<160> 12
<170> PatentIn version 3.0
<210> 1
<211> 1048
<212> DNA
<213> Polistes annularis
<400> 1

<210> 2
<211> 320
<212> PRT
<213> Polistes annularis
<400> 2


<210> 3
<211> 1273
<212> DNA
<213> Polistes annularis
<400> 3


<210> 4
<211> 367
<212> PRT
<213> Polistes annularis
<400> 4


<210> 5
<211> 114
<212> DNA
<213> Polistes annularis
<400> 5

<210> 6
<211> 127
<212> DNA
<213> Polistes annularis
<400> 6

<210> 7
<211> 317
<212> PRT
<213> Dolichovespula maculata
<400> 7


<210> 8
<211> 300
<212> PRT
<213> Vespula vulgaris
<400> 8


<210> 9
<211> 94
<212> DNA
<213> Polistes annularis
<400> 9

<210> 10
<211> 347
<212> PRT
<213> Apis melliferis
<400> 10


<210> 11
<211> 331
<212> PRT
<213> Dolichovespula maculata
<400> 11


<210> 12
<211> 331
<212> PRT
<213> Vespula vulgaris
<400> 12

