(19)
(11) EP 1 563 090 A2

(12)

(88) Date of publication A3:
06.05.2005

(43) Date of publication:
17.08.2005 Bulletin 2005/33

(21) Application number: 03768853.8

(22) Date of filing: 12.11.2003
(51) International Patent Classification (IPC)7C12Q 1/68, C12P 19/34, C07H 21/04
(86) International application number:
PCT/US2003/035819
(87) International publication number:
WO 2004/044700 (27.05.2004 Gazette 2004/22)
(84) Designated Contracting States:
AT BE BG CH CY CZ DE DK EE ES FI FR GB GR HU IE IT LI LU MC NL PT RO SE SI SK TR
Designated Extension States:
AL LT LV MK

(30) Priority: 12.11.2002 US 425880 P
12.11.2002 US 425879 P

(71) Applicant: Affymetrix, Inc.
Santa Clara, CA 95051 (US)

(72) Inventor:
  • GINGERAS, Thomas, R.
    Encinitas, CA 92024 (US)

(74) Representative: Bizley, Richard Edward et al
HLBBshawMerlin HouseFalconry CourtBaker's Lane
EppingEssex CM16 5DQ
EppingEssex CM16 5DQ (GB)

   


(54) METHODS, COMPOSITIONS AND COMPUTER SOFTWARE PRODUCTS FOR INTERROGATING SEQUENCE VARIATIONS IN FUNCTIONAL GENOMIC REGIONS