[0001] The present invention relates to pyrimidine derivatives, processes for their preparation,
pharmaceutical compositions containing them and their use in therapy.
[0002] The immune system is comprised of innate and acquired immunity, both of which work
cooperatively to protect the host from microbial infections. It has been shown that
innate immunity can recognize conserved pathogen-associated molecular patterns through
toll-like receptors (TLRs) expressed on the cell surface of immune cells. Recognition
of invading pathogens then triggers cytokine production (including interferon alpha(IFNα))
and upregulation of co-stimulatory molecules on phagocytes, leading to modulation
of T cell function. Thus, innate immunity is closely linked to acquired immunity and
can influence the development and regulation of an acquired response.
[0003] TLRs are a family of type I transmembrane receptors characterized by an NH
2-terminal extracellular leucine-rich repeat domain (LRR) and a COOH-terminal intracellular
tail containing a conserved region called the Toll/IL-1 receptor (TIR) homology domain.
The extracellular domain contains a varying number of LRR, which are thought to be
involved in ligand binding. Eleven TLRs have been described to date in humans and
mice. They differ from each other in ligand specificities, expression patterns, and
in the target genes they can induce.
[0004] Ligands which act via TLRs (also known as immune response modifiers (IRMS)) have
been developed, for example, the imidazoquinoline derivatives described in
US Patent No. 4689338 which include the product Imiquimod for treating genital warts, and the adenine derivatives
described in
WO 98/01448 and
WO 99/28321, and the 4-primary amino quinolines described in
US 2005/0119273. This patent application describes a class of pyrimidine derivatives having immunomodulating
properties that act via TLR7 which are useful in the treatment of viral or allergic
diseases and cancers.
[0005] In accordance with the present invention, there is therefore provided a compound
of formula (I)

wherein
R
1 represents C
1-C
6 alkyl, C
1-C
6 alkoxy or C
1-C
6 alkylthio;
R
2 represents either

R
3 represents a hydrogen atom or a C
1-C
3 alkyl group;
R
4 represents,
- (i) C3-C8 cycloalkyl, C1-C8 alkyl, C2-C8 alkenyl or C2-C8 alkynyl, each of which may be optionally substituted by one or more substituents
independently selected from halogen, hydroxyl, C1-C6 alkoxy, C1-C6 alkylthio and C3-C6 cycloalkyl, or
- (ii) a group

in which m is 1 or 2, q is 0, 1 or 2 and each R independently represents a halogen
atom or a hydroxyl, methyl, cyano, trifluoromethyl, S(O)h-methyl or methoxy group;
X
1 represents an oxygen or sulphur atom or a group NH or CH
2;
X
2 and X
4 each independently represent a bond or an oxygen or sulphur atom;
R
5 and R
5a each independently represent a hydrogen atom or a C
1-C
3 alkyl group;
R
6 represents a C
1-C
6 alkyl group optionally substituted by one or more substituents independently selected
from halogen, cyano, hydroxyl, C
1-C
3 alkoxy, methylsulphonyl, methylthiazolyl and NR
10R
11, or R
6 represents a saturated heterocyclic ring optionally substituted by C
1-C
6 alkyl;
j is 1 or 2;
each R
7 independently represents a hydrogen or halogen atom or a hydroxyl, methyl, cyano,
halomethoxy or methoxy group;
Z
1 represents a C
2-C
6 alkylene or C
3-C
8 cycloalkylene group;
X
3 represents NR
12, >N-COR
12, CONR
12, NR
12CO, SO
2NR
12, >N-SO
2R
12, NR
12SO
2,
NR
12CONR
13 or NR
13CONR
12, S(O)
p or O;
p is 0, 1 or 2;
Y
1 represents a single bond or C
1-C
6 alkylene;
A represents a monocyclic or bicyclic C
6-C
10 aryl or a monocyclic or bicyclic C
5-C
12 heteroaryl group containing 1 to 3 ring heteroatoms;
R
8 represents a C
1-C
6 alkyl group optionally substituted by one or more substituents independently selected
from halogen, cyano, hydroxyl, NR
10R
11 and C
1-C
3 alkoxy;
n is 0, 1 or 2;
each R
9 independently represents halogen, cyano, hydroxy, thiol, C
1-C
3 alkyl, C
1-C
3 hydroxyalkyl, C
1-C
3 haloalkyl, C
1-C
3 alkoxy, C
1-C
3 haloalkoxy, C
1-C
3 alkylthio, C
1-C
3 alkylsulfonyl or C
1-C
3 alkylsulfinyl;
R
10 and R
11 each independently represent hydrogen, C
1-C
6 alkyl or C
3-C
6 cycloalkyl, or R
10 and R
11 together with the nitrogen atom to which they are attached form a 4- to 7-membered
saturated heterocyclic ring which may optionally contain a further ring heteroatom
selected from oxygen, S(O)
v or NR
36, the heterocyclic ring being optionally substituted by C
1-C
6 alkyl (which is itself optionally substituted by C
1-C
6 alkoxy) or di-C
1-C
6 alkylamino;
R
12 represents a hydrogen atom, a 3- to 8-membered saturated or unsaturated heterocyclic
ring comprising at least one ring group O, S(O)
t, N or NR
14, a C
1-C
6 alkyl group or C
3-C
6 cycloalkyl group, the latter two groups being optionally substituted by one or more
substituents independently selected from NR
15R
16 and R
17, or
R
12 is a C
1-C
6 alkylene which may be linked to a carbon atom within a C
2-C
6 alkylene group Z
1 so as to form a saturated 4- to 7-membered nitrogen-containing ring;
R
14, R
22 and R
35 each independently represent a hydrogen atom, CO
2R
18, S(O)
wR
18, COR
19, or a C
1-C
6 alkyl, C
2-C
6 alkenyl, C
2-C
6 alkynyl or C
3-C
8 cycloalkyl group, each of which may be optionally substituted by one or more substituents
independently selected from halogen, cyano, OR
20 and NR
20R
21;
R
15 and R
16 each independently represent a hydrogen atom, a 3- to 8-membered saturated heterocyclic
ring comprising at least one ring group O, S(O)
z or NR
22, C
1-C
6 alkyl or C
3-C
6 cycloalkyl, the latter two groups being optionally substituted by one or more substituents
independently selected from halogen, cyano, S(O)
aR
23, OR
24, CO
2R
24, OC(O)R
24, SO
2NR
24R
25, CONR
24R
25, NR
24R
25, NR
24SO
2R
26, NR
24COR
25, or a 3- to 8-membered saturated heterocyclic ring comprising at least one ring group
O, S(O)
b or NR
25, or
R
15 and R
16 together with the nitrogen atom to which they are attached form a 3- to 8-membered
saturated heterocyclic ring comprising a ring nitrogen atom and optionally one or
more further ring heteroatoms independently selected from nitrogen, oxygen, sulphur
and sulphonyl, the heterocyclic ring being optionally substituted by one or more substituents
independently selected from halogen, cyano, S(O)
dR
27, OR
27, CO
2R
27, COR
27, OC(O)R
27, SO
2NR
27R
28, CONR
27R
28, NR
27R
28, NR
27SO
2R
29, NR
27COR
28, C
1-C
6 haloalkyl, C
3-C
8 cycloalkyl, C
1-C
6 alkyl, aryl and heteroaryl, the latter four groups being optionally substituted by
one or more substituents independently selected from halogen, cyano, S(O)
fR
30, OR
30, CO
2R
30, SO
2NR
30R
31, CONR
30R
31 and NR
30R
31;
R
17 represents halogen, cyano, C
1-C
3 haloalkoxy, CO
2R
32, S(O)
gR
32, OR
32, SO
2NR
32R
34, CONR
32R
34, NR
32SO
2R
33, NR
32CO
2R
33, NR
32COR
34 or a 3- to 8-membered saturated heterocyclic ring comprising a ring group NR
35;
a, b, d, f, g, h, t, v, w and z each independently represent 0, 1 or 2;
R
18, R
26, R
29 and R
33 each independently represent a C
1-C
6 alkyl or C
3-C
6 cycloalkyl group;
R
13, R
19, R
20, R
21, R
23, R
24, R
25, R
27, R
28, R
30, R
31, R
32 and R
34 each independently represent a hydrogen atom or a C
1-C
6 alkyl or C
3-C
6 cycloalkyl group; and
R
36 represents a hydrogen atom or a C
1-C
3 alkyl group;
or a pharmaceutically acceptable salt thereof.
[0006] In the context of the present specification, unless otherwise stated, an alkyl, alkenyl
or alkynyl substituent group or an alkyl, alkenyl or alkyenyl moiety in a substituent
group may be linear or branched. Examples of C
1-C
8 alkyl groups/moieties include methyl, ethyl, propyl, 2-methyl-1-propyl, 2-methyl-2-propyl,
2-methyl-1-butyl, 3-methyl-1-butyl, 2-methyl-3-butyl, 2,2-dimethyl-1-propyl, 2--methyl-pentyl,
3-methyl-1-pentyl, 4-methyl-1-pentyl, 2-methyl-2-pentyl, 3-methyl-2-pentyl, 4-methyl-2-pentyl,
2,2-dimethyl-1-butyl, 3,3-dimethyl-1-butyl, 2-ethyl-1-butyl, n-butyl, isobutyl, tert-butyl,
n-pentyl, isopentyl, neopentyl, n-hexyl, n-heptyl and n-octyl. Examples of C
2-C
8 alkenyl groups/moieties include ethenyl, propenyl, 1-butenyl, 2-butenyl, 1-pentenyl,
1-hexenyl, 1-heptenyl, 1-octenyl, 1,3-butadienyl, 1,3-pentadienyl, 1,4-pentadienyl
and 1, 4-hexadienyl. Examples of C
2-C
8 alkynyl groups/moieties include ethynyl, 1-propynyl, 2-propynyl (propargyl) or 2-butynyl.
[0007] Similarly, an alkylene group/moiety may be linear or branched. Examples of C
1-C
6 alkylene groups/moieties include methylene, ethylene, n-propylene, n-butylene, n-pentylene,
n-hexylene, 1-methylethylene, 2-methylethylene, 1,2-dimethylethylene, 1-ethylethylene,
2-ethylethylene, 1-, 2- or 3-methylpropylene and 1-, 2- or 3-ethylpropylene. A C
3-C
8 cycloalkyl(ene) group is a cyclopropyl(ene), cyclobutyl(ene), cyclopentyl(ene), cyclohexyl(ene),
cycloheptyl(ene) or cyclooctyl(ene) group. A C
1-C
6 haloalkyl or C
1-C
6 haloalkoxy substituent group/moiety will comprise at least one halogen atom, e.g.
one, two, three, four or five halogen atoms, examples of which include trifluoromethyl,
trifluoromethoxy or pentafluoroethyl. A C
1-C
6 hydroxyalkyl substituent group/moiety will comprise at least one hydroxyl group,
e.g. one, two, three or four hydroxyl groups, examples of which include -CH
2OH, -CH
2CH
2OH, -CH
2CH
2CH
2OH and -CH(CH
2OH)
2. An unsaturated (heterocyclic) ring will be partially or fully unsaturated. The alkyl
groups in a di-C
1-C
6 alkylamino group may be the same or different. When R
6 represents a C
1-C
6 alkyl group optionally substituted by NR
10R
11 where R
10 and R
11 together with the nitrogen atom to which they are attached form an optionally substituted
4- to 7-membered saturated heterocyclic ring which may optionally contain a further
ring heteroatom selected from oxygen, S(O)
v or NR
36, it will be appreciated that the ring may be attached to the alkyl chain via any
suitable ring atom, whether a carbon atom or a heteroatom. The same comment applies
to the 3- to 8-membered saturated or unsaturated heterocyclic ring defined in R
12, and the heterocyclic rings defined in R
15, R
16and R
17.
[0008] An aryl group/moiety may contain from 6 to 10 carbon atoms and may be monocyclic
or polycyclic (e.g. bicyclic or tricyclic) in which the two or more rings are fused.
Heterocyclic groups are rings which may be saturated, partially unsaturated or unsaturated,
and contain from 3 to 20 atoms, at least one and suitably from 1 to 4 atoms are heteroatoms
selected from oxygen, sulphur and nitrogen. Rings may be monocyclic, fused, bridged,
or spiro bicyclic heterocyclic ring system(s). Monocyclic heterocyclic rings contain
from about 3 to 12 ring atoms, with from 1 to 5 heteroatoms selected from N, O, and
S, and suitably from 3 to 7 member atoms, in the ring. Bicyclic heterocycles contain
from 7 to 17 member atoms, suitably 7 to 12 member atoms, in the ring. Bicyclic heterocycles
contain from about 7 to about 17 ring atoms, suitably from 7 to 12 ring atoms. Bicyclic
heterocyclic(s) rings may be fused, spiro, or bridged ring systems.
[0009] Examples of heterocyclic groups which are saturated or partially saturated include
cyclic ethers (oxiranes) such as ethyleneoxide, tetrahydrofuran, dioxane, and substituted
cyclic ethers. Heterocycles containing nitrogen include, for example, azetidine, pyrrolidine,
piperidine, piperazine, tetrahydrotriazine, tetrahydropyrazole, and the like. Typical
sulfur containing heterocycles include tetrahydrothiophene, dihydro-1,3-dithiol-2-yl,
and hexahydrothiepin-4-yl. Other heterocycles include dihydro-oxathiol-4-yl, tetrahydro-oxazolyl,
tetrahydro-oxadiazolyl, tetrahydrodioxazolyl, tetrahydro-oxathiazolyl, hexahydrotriazinyl,
tetrahydro-oxazinyl, morpholinyl, thiomorpholinyl, tetrahydropyrimidinyl, dioxolinyl,
octahydrobenzofuranyl, octahydrobenzimidazolyl, and octahydrobenzothiazolyl. For heterocycles
containing sulfur, the oxidized sulfur heterocycles containing SO or SO
2 groups are also included. Examples include the sulfoxide and sulfone forms of tetrahydrothiophene.
A suitable value for a heterocyclyl group which bears 1 or 2 oxo or thioxo substituents
is, for example, 2-oxopyrrolidinyl, 2-thioxopyrrolidinyl, 2-oxoimidazolidinyl, 2-thioxoimidazolidinyl,
2-oxopiperidinyl, 2,5-dioxopyrrolidinyl, 2,5-dioxoimidazolidinyl or 2,6-dioxopiperidinyl.
[0010] Heterocyclic groups which are aromatic in nature are referred to as "heteroaryl"
groups. These groups are aromatic mono-, bi-, or polycyclic heterocyclic ring incorporating
one or more (for example 1-4) heteroatoms selected from N, O, and S. The term heteroaryl
includes both monovalent species and divalent species. Examples of heteroaryl groups
include furyl, pyrrolyl, thienyl, oxazolyl, isoxazolyl, imidazolyl, pyrazolyl, thiazolyl,
isothiazolyl, oxadiazolyl, thiadiazolyl, triazolyl, tetrazolyl, pyridyl, pyridazinyl,
pyrimidinyl, pyrazinyl, 1,3,5-triazenyl, benzofuranyl, indolyl, isoindolyl, benzothienyl,
benzoxazolyl, benzimidazolyl, benzothiazolyl, benzothiazolyl, indazolyl, purinyl,
benzofurazanyl, quinolyl, isoquinolyl, quinazolinyl, quinoxalinyl, cinnolinyl, pteridinyl,
naphthyridinyl, carbazolyl, phenazinyl, benzisoquinolinyl, pyridopyrazinyl, thieno[2,3-b]furanyl,
2H-furo[3,2-b]-pyranyl, 5H-pyrido[2,3-d]-o-oxazinyl, 1H-pyrazolo[4,3-d]-oxazolyl,
4H-imidazo[4,5-d]thiazolyl, pyrazino[2,3-d]pyridazinyl, imidazo[2,1-b]thiazolyl, imidazo[1,2-b][1,2,4]triazinyl.
"Heteroaryl" also covers ring systems wherein at least one ring is an aromatic ring
containing 1 or more heteroatoms selected from O, S and N and one or more of the other
rings is a non-aromatic, saturated or partially unsaturated ring optionally containing
one or more heteroatoms selected from O, S and N, for example 1,2,3,4-tetrahydro-1,8-naphthyridinyl,
1,2,3,4-tetrahydropyrido[2,3-b]pyrazinyl and 3,4-dihydro-2H-pyrido[3,2-b][1,4]oxazinyl.
[0011] For the avoidance of doubt, it should be understood that the definitions of the heterocyclic
rings in formula (I) are not intended to include unstable structures or any O-O, O-S
or S-S bonds and that a substituent, if present, may be attached to any suitable ring
atom.
[0012] When any chemical moiety or group in formula (I) is described as being optionally
substituted, it will be appreciated that the moiety or group may be either unsubstituted
or substituted by one or more of the specified substituents. It will be appreciated
that the number and nature of substituents will be selected so as to avoid sterically
undesirable combinations.
[0013] Fig. 1A is an X-ray powder diffraction pattern of 4-(Dimethylamino)butyl 2-(4-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl)acetate,
monosaccharin salt.
[0014] Fig. 1B is a table listing the 2θ (2 theta) values and d-spacings corresponding to
the peaks shown in the X-ray diffraction pattern of Fig. 1A.
[0015] R
1 represents C
1-C
6, preferably C
1-C
4, alkyl (e.g. methyl, ethyl, n-propyl, isopropyl, n-butyl, isobutyl, tert-butyl, n-pentyl
or n-hexyl), C
1-C
6, preferably C
1-C
4, alkoxy (e.g. methoxy, ethoxy, n-propoxy, isopropoxy, n-butoxy, isobutoxy, tert-butoxy,
n-pentoxy or n-hexoxy), or C
1-C
6, preferably C
1-C
4, alkylthio (e.g. methylthio, ethylthio, n-propylthio, isopropylthio, n-butylthio,
isobutylthio, tert-butylthio, n-pentylthio or n-hexylthio).
[0016] In an embodiment of the invention, R
1 represents a C
1-C
6 alkyl group, particularly methyl group.
[0017] In an embodiment of the invention, R
3 represents a hydrogen atom.
[0018] In an embodiment of the invention, R represents a C
3-C
8, preferably C
3-C
6, cycloalkyl, C
1-C
8, preferably C
4-C
8 or C
5-C
7, alkyl, C
2-C
8, preferably C
4-C
7, alkenyl or C
2-C
8, preferably C
4-C
7, alkynyl group, each of which may be optionally substituted by one or more substituents
(e.g. one, two, three or four substituents) independently selected from halogen (e.g.
fluorine, chlorine, bromine or iodine), hydroxyl, C
1-C
6, preferably C
1-C
4, alkoxy, C
1-C
6, preferably C
1-C
4, alkylthio and C
3-C
6, preferably C
5-C
6, cycloalkyl.
[0019] In another embodiment, R
4 represents C
1-C
8 alkyl group, in particular a C
4-C
7 alkyl group which is optionally substituted by a hydroxyl group.
[0020] In one embodiment of the invention, R
2 represents a group (Ia).
In an embodiment of the invention, X
1 represents a sulphur atom or, in particular, CH
2.
X
2 preferably represents a bond or an oxygen atom.
In one embodiment, X
2 represents a bond.
R
5 preferably represents a hydrogen atom.
R
6 represents a C
1-C
6, preferably C
1-C
4, alkyl (e.g. methyl, ethyl, n-propyl, isopropyl, n-butyl, isobutyl, tert-butyl, n-pentyl
or n-hexyl) group optionally substituted by one or more substituents (e.g. one, two,
three or four substituents) independently selected from halogen, cyano, hydroxyl,
C
1-C
3 alkoxy, methylsulphonyl, methylthiazolyl and NR
10R
11, or R
6 represents a saturated heterocyclic ring, e.g. a 5- to 6-membered saturated heterocyclic
ring such as piperidine, optionally substituted by C
1-C
6, preferably C
1-C
4, alkyl, in particular methyl.
In one aspect R
6 represents a C
1-C
6, preferably C
1-C
4, alkyl (e.g. methyl, ethyl, n-propyl, isopropyl, n-butyl, isobutyl, tert-butyl, n-pentyl
or n-hexyl) group optionally substituted by one or more substituents (e.g. one, two,
three or four substituents) independently selected from halogen (e.g. fluorine, chlorine,
bromine or iodine), cyano, hydroxyl, C
1-C
3 alkoxy and NR
10R
11. In another aspect, R
6 represents a C
1-C
6 alkyl group, particularly methyl group. In still another aspect, R
6 represents a C
1-C
6 alkyl group substituted by NR
10R
11.
Each R
7 independently represents a hydrogen or halogen (e.g. fluorine, chlorine, bromine
or iodine) atom or a hydroxyl, methyl, cyano, halomethoxy or methoxy group. In one
aspect, j is 1 and R
7 represents hydrogen, hydroxyl, fluorine or methoxy.
R
10 and R
11 each independently represent hydrogen, C
1-C
6, preferably C
1-C
4, alkyl (e.g. methyl, ethyl, n-propyl, isopropyl, n-butyl, isobutyl, tert-butyl, n-pentyl
or n-hexyl) or C
3-C
6, preferably C
5-C
6, cycloalkyl, or R
10 and R
11 together with the nitrogen atom to which they are attached form a 4- to 7-membered,
preferably 5- to 6-membered, saturated heterocyclic ring which may optionally contain
a further ring heteroatom selected from oxygen, S(O)
v or NR
36, the heterocyclic ring being optionally substituted by C
1-C
6, preferably C
1-C
4, alkyl (which is itself optionally substituted by C
1-C
6, preferably C
1-C
4, alkoxy, e.g. methoxy or ethoxy) or di-C
1-C
6 alkylamino (e.g. dimethylamino).
In one aspect R
10 and R
11 each independently represent hydrogen, C
1-C
6, preferably C
1-C
4, alkyl (e.g. methyl, ethyl, n-propyl, isopropyl, n-butyl, isobutyl, tert-butyl, n-pentyl
or n-hexyl) or C
3-C
6, preferably C
5-C
6, cycloalkyl, or R
10 and R
11 together with the nitrogen atom to which they are attached form a 4- to 7-membered,
preferably 5- to 6-membered, saturated heterocyclic ring which may optionally contain
a further ring heteroatom selected from oxygen, S(O)
v or NR
36.
In another aspect, R
10 and R
11 each represent a methyl group, or R
10 and R
11 together with the nitrogen atom to which they are attached form a 5- to 6-membered,
saturated heterocyclic ring which may optionally contain a further ring heteroatom
selected from oxygen, S(O)
v or NR
36, the heterocyclic ring being optionally substituted by C
1-C
2 alkyl (which is itself optionally substituted by methoxy) or dimethylamino.
In a further aspect, R
10 and R
11 each represent a methyl group, or R
10 and R
11 together with the nitrogen atom to which they are attached form a 6-membered saturated
heterocyclic ring containing a further ring heteroatom selected from oxygen or NR
36.
[0021] In an alternative embodiment, R
2 represents a group (Ib).
Z
1 represents a C
2-C
6, preferably C
2-C
4, alkylene or C
3-C
8, preferably C
5-C
6,
cycloalkylene group. In one aspect, Z
1 represents a linear C
2-C
6 alkylene, in particular a linear C
3-C
4 alkylene, group.
In one aspect, X
3 represents NR
12, >N-COR
12, NR
12CO or >N-SO
2R
12.
Y
1 represents a single bond or a C
1-C
6, preferably C
1-C
4, alkylene group. In one aspect,
Y
1 represents a C
1-C
6 alkylene, particularly methylene, group.
X
4 preferably represents a bond or an oxygen atom.
In one embodiment, X
4 represents a bond.
R
5a preferably represents a hydrogen atom.
A represents a monocyclic or bicyclic C
6-C
10 aryl or a monocyclic or bicyclic C
5-C
12 heteroaryl group containing 1 to 3 ring heteroatoms independently selected from nitrogen,
oxygen and sulphur. In one aspect, A represents a phenyl ring.
R
8 represents a C
1-C
6, preferably C
1-C
4, alkyl (e.g. methyl, ethyl, n-propyl, isopropyl, n-butyl, isobutyl, tert-butyl, n-pentyl
or n-hexyl) group optionally substituted by one or more substituents (e.g. one, two,
three or four substituents) independently selected from halogen (e.g. fluorine, chlorine,
bromine or iodine), cyano, hydroxyl, NR
10R
11 and C
1-C
3 alkoxy.
In one aspect, R
8 represents a C
1-C
6 alkyl group, particularly methyl group.
When n is 1 or 2, each R
9 independently represents halogen (e.g. fluorine, chlorine,
bromine or iodine), cyano, hydroxy, thiol, C
1-C
3 alkyl (e.g. methyl or ethyl),
C
1-C
3 hydroxyalkyl (e.g. hydroxymethyl), C
1-C
3 haloalkyl (e.g. trifluoromethyl),
C
1-C
3 alkoxy (e.g. methoxy or ethoxy), C
1-C
3 haloalkoxy (e.g. trifluoromethoxy),
C
1-C
3 alkylthio (e.g. methylthio or ethylthio), C
1-C
3 alkylsulfonyl (e.g. methylsulfonyl) or C
1-C
3 alkylsulfinyl (e.g. methylsulfinyl).
In one aspect, n is 0.
[0022] R
12 represents a hydrogen atom, a 3- to 8-, particularly 5- to 8-membered saturated or
unsaturated heterocyclic ring comprising at least one ring group (e.g. one, two, three
or four ring groups independently selected from) O, S(O)
t, N or NR
14, a C
1-C
6, preferably C
1-C
4, alkyl (e.g. methyl, ethyl, n-propyl, isopropyl, n-butyl, isobutyl, tert-butyl, n-pentyl
or n-hexyl) group or C
3-C
6, preferably C
5-C
6, cycloalkyl group, the latter two groups being optionally substituted by one or more
substituents (e.g. one, two or three substituents) independently selected from NR
15R
16 and R
17, or
R
12 is a C
1-C
6 alkylene which may be linked to a carbon atom within a C
2-C
6 alkylene group Z
1 so as to form a saturated 4- to 7-membered nitrogen-containing ring.
[0023] In one embodiment of the invention, R
12 represents a hydrogen atom, a 5- or 6-membered saturated or unsaturated heterocyclic
ring comprising one or two ring groups independently selected from N and NR
14 , or a C
1-C
6, preferably C
1-C
4, alkyl group optionally substituted by one or more substituents (e.g. one, two or
three substituents) independently selected from NR
15 R
16 and R
17.
[0024] In a further embodiment, R
12 represents a hydrogen atom, a 5-membered unsaturated heterocyclic ring comprising
two ring groups independently selected from N and NR
14, or a C
1-C
3 alkyl group optionally substituted by NR
15R
16 or R
17.
[0025] In an embodiment of the invention, R
14 represents a C
1-C
6 alkyl group, particularly methyl group.
[0026] R
15 and R
16 each independently represent a hydrogen atom, a 3- to 8-membered saturated heterocyclic
ring comprising at least one ring group O, S(O)
z or NR
22, C
1-C
6, preferably C
1-C
4, alkyl (e.g. methyl, ethyl, n-propyl, isopropyl, n-butyl, isobutyl, tert-butyl, n-pentyl
or n-hexyl) group or C
3-C
6, preferably C
5-C
6, cycloalkyl group, the latter two groups being optionally substituted by one or more
substituents (e.g. one, two, three or four substituents) independently selected from
halogen (e.g. fluorine, chlorine, bromine or iodine), cyano, S(O)
aR
23, OR
24, CO
2R
24, OC(O)R
24, SO
2NR
24R
25, CONR
24R
25, NR
24R
25, NR
24SO
2R
26, NR
24COR
25, or a 3- to 8-membered saturated heterocyclic ring comprising at least one ring group
O, S(O)
b or NR
25, or
R
15 and R
16 together with the nitrogen atom to which they are attached form a 3- to 8-membered
saturated heterocyclic ring comprising a ring nitrogen atom and optionally one or
more (e.g. one, two or three) further ring heteroatoms independently selected from
nitrogen, oxygen, sulphur and sulphonyl, the heterocyclic ring being optionally substituted
by one or more substituents (e.g. one, two, three or four substituents) independently
selected from halogen (e.g. fluorine, chlorine, bromine or iodine), cyano, S(O)
dR
27, OR
27, CO
2R
27, COR
27, OC(O)R
27, SO
2NR
27R
28, CONR
27R
28, NR
27R
28, NR
27SO
2R
29, NR
27COR
28, C
1-C
6, preferably C
1-C
4, haloalkyl, C
3-C
8, preferably C
3-C
6,cycloalkyl, C
1-C
6, preferably C
1-C
4, alkyl, aryl and heteroaryl, the latter four groups being optionally substituted
by one or more substituents (e.g. one, two, three or four substituents) independently
selected from halogen, cyano, S(O)
fR
30, OR
30, CO
2R
30, SO
2NR
30R
31, CONR
30R
31 and NR
30R
31.
[0027] In an embodiment of the invention, R
15 and R
16 each independently represent a hydrogen atom or a C
1-C
6, preferably C
1-C
4, alkyl group optionally substituted by one or more substituents (e.g. one, two, three
or four substituents) independently selected from halogen, cyano, S(O)
aR
23, OR
24, CO
2R
24, OC(O)R
24, SO
2NR
24R
25, CONR
24R
25, NR
24R
25, NR
24SO
2R
26, NR
24COR
25, or a 3- to 8-membered saturated heterocyclic ring comprising at least one ring group
O, S(O)
b or NR
25.
[0028] In another embodiment, R
15 and R
16 each independently represent a C
1-C
6, preferably C
1-C
4, more preferably C
1-C
2, alkyl group optionally substituted by OR
24.
[0029] In an alternative embodiment, R
15 and R
16 together with the nitrogen atom to which they are attached form a 3- to 8-, particularly
5- to 7-membered saturated heterocyclic ring comprising a ring nitrogen atom and optionally
one or more (e.g. one, two or three) further ring heteroatoms independently selected
from nitrogen, oxygen, sulphur and sulphonyl, the heterocyclic ring being optionally
substituted by one or more substituents (e.g. one, two, three or four substituents)
independently selected from halogen (e.g. fluorine, chlorine, bromine or iodine),
cyano, OR
27, CO
2R
27, COR
27, C
1-C
6, preferably C
1-C
4, alkyl and aryl, the latter two groups being optionally substituted by one or more
substituents (e.g. one, two, three or four substituents) independently selected from
halogen, cyano, S(O)
fR
30, OR
30, CO
2R
30, SO
2NR
30R
31, CONR
30R
31 and NR
30R
31.
[0030] In a further embodiment, R
15 and R
16 together with the nitrogen atom to which they are attached form a 5- to 7-membered
saturated heterocyclic ring comprising a ring nitrogen atom and optionally a second
ring nitrogen or oxygen atom, the heterocyclic ring being optionally substituted by
OR
27, CO
2R
27, COR
27, C
1-C
3 alkyl or phenyl, the latter two groups being optionally substituted by S(O)
fR
30 or NR
30R
31.
[0031] In an embodiment of the invention, R
17 represents CO
2R
32.
[0032] R
18, R
26, R
29 and R
33 each independently represent a C
1-C
6, preferably C
1-C
4, alkyl (e.g. methyl, ethyl, n-propyl, isopropyl, n-butyl, isobutyl, tert-butyl, n-pentyl
or n-hexyl) group or C
3-C
6, preferably C
5-C
6, cycloalkyl group.
[0033] R
13, R
19, R
20, R
21, R
23, R
24, R
25, R
27, R
28, R
30, R
31, R
32 and R
34 each independently represent a hydrogen atom or a C
1-C
6, preferably C
1-C
4, alkyl (e.g. methyl, ethyl, n-propyl, isopropyl, n-butyl, isobutyl, tert-butyl, n-pentyl
or n-hexyl) group or C
3-C
6, preferably C
5-C
6, cycloalkyl group.
[0034] In an embodiment of the invention,
R
1 represents methyl;
R
2 represents either

R
3 represents a hydrogen atom;
R
4 represents a C
4-C
7 alkyl group optionally substituted by a hydroxyl group;
X
1 represents CH
2;
X
2 represents a bond or an oxygen atom;
R
5 represents a hydrogen atom;
R
6 represents a C
1-C
6 alkyl group optionally substituted by NR
10R
11;
j is 1;
R
7 represents a hydrogen or halogen (particularly fluorine) atom or a methoxy group;
Z
1 represents a C
3-C
4 alkylene;
X
3 represents NR
12, >N-COR
12, NR
12CO or >N-SO
2R
12;
Y
1 represents methylene;
X
4 represents a bond or an oxygen atom;
R
5a represents a hydrogen atom;
A represents a monocyclic or bicyclic C
6-C
10 aryl (particularly phenyl) group;
R
8 represents methyl;
n is 0;
R
10 and R
11 each represent a methyl group, or R
10 and R
11 together with the nitrogen atom to which they are attached form a 6-membered saturated
heterocyclic ring containing a further ring heteroatom selected from oxygen or NR
36;
R
12 represents a hydrogen atom, a 5-membered unsaturated heterocyclic ring comprising
two ring groups independently selected from N and NR
14, or a C
1-C
3 alkyl group optionally substituted by NR
15R
16 or R
17;
R
14 represents methyl;
R
15 and R
16 each independently represent a C
1-C
2 alkyl group optionally substituted by OR
24, or
R
15 and R
16 together with the nitrogen atom to which they are attached form a 5- to 7-membered
saturated heterocyclic ring comprising a ring nitrogen atom and optionally a second
ring nitrogen or oxygen atom, the heterocyclic ring being optionally substituted by
OR
27, CO
2R
27, COR
27,C
1-C
3 alkyl or phenyl, the latter two groups being optionally substituted by S(O)
fR
30 or NR
30R
31;
f is 2;
R
17 represents CO
2R
32; and
R
24, R
27, R
30, R
31 and R
32 each independently represent a hydrogen atom or a methyl group.
[0035] In another embodiment of the invention,
R
1 represents methyl;
R represents either

R
3 represents a hydrogen atom;
R
4 represents a C
4-C
7 alkyl group optionally substituted by a hydroxyl group;
X
1 represents a sulphur atom or CH
2;
X
2 represents a bond or an oxygen atom;
R
5 represents a hydrogen atom;
R
6 represents a C
1-C
6 alkyl group optionally substituted by hydroxyl, methylsulphonyl, methylthiazolyl
or NR
10R
11, or R
6 represents a 5- to 6-membered saturated heterocyclic ring optionally substituted
by C
1-C
6 alkyl;
j is 1;
R
7 represents a hydrogen or halogen (particularly fluorine) atom or a hydroxyl or methoxy
group;
Z
1 represents a C
3 alkylene;
X
3 represents NR
12, >N-COR
12, NR
12CO or >N-SO
2R
12;
Y
1 represents methylene;
X
4 represents a bond or an oxygen atom;
R
5a represents a hydrogen atom;
A represents a monocyclic or bicyclic C
6-C
10 aryl (particularly phenyl) group;
R
8 represents methyl;
n is 0;
R
10 and R
11 each represent a methyl group, or R
10 and R
11 together with the nitrogen atom to which they are attached form a 5- or 6-membered
saturated heterocyclic ring optionally containing a further ring heteroatom selected
from oxygen, S(O)
v or NR
36, the heterocyclic ring being optionally substituted by C
1-C
6 alkyl (which is itself optionally substituted by C
1-C
6 alkoxy) or di-C
1-C
6 alkylamino;
v is 2;
R
12 represents a hydrogen atom, a 5- or 6-membered saturated or unsaturated heterocyclic
ring comprising one or two ring groups independently selected from N and NR
14, or a C
1-C
3 alkyl group optionally substituted by NR
15R
16 or R
17;
R
14 represents methyl;
R
15 and R
16 each independently represent a C
1-C
2 alkyl group optionally substituted by OR
24, or
R
15 and R
16 together with the nitrogen atom to which they are attached form a 5- to 7-membered
saturated heterocyclic ring comprising a ring nitrogen atom and optionally a second
ring nitrogen or oxygen atom, the heterocyclic ring being optionally substituted by
OR
27, CO
2R
27, COR
27,C
1-C
3 alkyl or phenyl, the latter two groups being optionally substituted by S(O)
fR
30 or NR
30R
31;
f is 2;
R
17 represents CO
2R
32 or S(O)
gR
32;
g is 0; and
R
24, R
27, R
30, R
31 and R
32 each independently represent a hydrogen atom or a methyl group.
[0036] Examples of compounds of the invention include:
Methyl 2-(3-((3-(2-Amino-4-methyl-6-(pentylamino)pyrimidin-5 yl)propylamino)methyl)phenyl)acetate,
Methyl 2-(4-((3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propylamino)methyl)phenyl)acetate,
Methyl 2-(3-((N-(3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propyl)-2-(dimethylamino)acetamido)methyl)phenyl)acetate,
Methyl 2-(4-((N-(3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propyl)-2-(dimethylamino)acetamido)methyl)phenyl)acetate,
(S)-Methyl 1-(2-((3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propyl)(3-(2-methoxy-2-oxoethyl)benzyl)amino)-2-oxoethyl)pyrrolidine-2-carboxylate,
Methyl 2-(3-((N-(3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propyl)-2-(4-methylpiperazin-1-yl)acetamido)methyl)phenyl)acetate,
Methyl 2-(3-((N-(3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propyl)-2-(4-hydroxypiperidin-1-yl)acetamido)methyl)phenyl)acetate,
Methyl 2-(3-((2-(4-acetyl-1,4-diazepan-1-yl)-N-(3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propyl)acetamido)methyl)phenyl)acetate,
Methyl 2-(3-((N-(3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propyl)-2-(4-(3-(dimethylamino)propyl)piperazin-1-yl)acetamido)methyl)phenyl)acetate,
Methyl 2-(3-((N-(3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propyl)-2-((2-hydroxyethyl)(methyl)amino)acetamido)methyl)phenyl)acetate,
Methyl 4-((3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propyl)(3-(2-methoxy-2-oxoethyl)benzyl)amino)-4-oxobutanoate,
Methyl 2-(3-((N-(3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propyl)-4-(dimethylamino)butanamido)methyl)phenyl)acetate,
Methyl 2-(3-((N-(3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propyl)methylsulfonamido)methyl)phenyl)acetate,
Methyl 2-(3-((N-(3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propyl)-1-methyl-1H-imidazole-4-sulfonamido)methyl)phenyl)acetate,
Methyl 2-(4-((N-(3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propyl)-2-((2-methoxyethyl)(methyl)amino)acetamido)methyl)phenyl)acetate,
Methyl 2-(3-((N-(3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propyl)-3-(dimethylamino)propanamido)methyl)phenyl)acetate,
Methyl 2-(3-((4-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)butylamino)methyl)phenyl)acetate,
(S)-Methyl 2-(4-((3-(2-amino-4-(1-hydroxyheptan-3-ylamino)-6-methylpyrimidin-5-yl)propylamino)methyl)phenyl)acetate,
(S)-Methyl 2-(4-((N-(3-(2-amino-4-(1-hydroxyheptan-3-ylamino)-6-methylpyrimidin-5-yl)propyl)-2-(dimethylamino)acetamido)methyl)phenyl)acetate,
Methyl 2-(3-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl)acetate,
Methyl 2-(4-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)-3-methoxyphenyl)acetate,
Methyl 2-(4-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)-3-fluorophenyl)acetate,
Methyl 2-(4-(2-(3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propylamino)-2-oxoethyl)phenyl)acetate,
Methyl 2-(3-(2-(3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propylamino)-2-oxoethyl)phenyl)acetate,
Methyl 2-(3-((3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propylamino)methyl)phenoxy)acetate,
Methyl 2-(4-((N-(3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propyl)-2-(3-(4-(methylsulfonyl)phenyl)piperidin-1-yl)acetamido)methyl)phenyl)acetate,
Methyl 2-(4-((N-(3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propyl)-2-morpholinoacetamido)methyl)phenyl)acetate,
Methyl 2-(4-((N-(3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propyl)-2-(4-phenylpiperidin-1-yl)acetamido)methyl)phenyl)acetate,
Methyl 2-(4-((N-(3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propyl)-2-(piperidin-1-yl)acetamido)methyl)phenyl)acetate,
(S)-Methyl 2-(4-((2-amino-4-(1-hydroxypentan-2-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-methoxyphenyl)acetate,
(S)-Methyl 2-(4-((2-amino-4-(1-hydroxyheptan-3-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-methoxyphenyl)acetate,
(S)-Methyl 2-(4-((2-amino-4-(1-hydroxyhexan-2-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-methoxyphenyl)acetate,
(S)-Methyl 2-(4-((2-amino-4-(1-hydroxyheptan-3-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-fluorophenyl)acetate,
Methyl 2-(4-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl) acetate,
2-Morpholinoethyl 2-(4-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl)acetate,
2-(Dimethylamino)ethyl 2-(4-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl)acetate,
3-(Dimethylamino)propyl 2-(4-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl)acetate,
2-(4-Methylpiperazin-1-yl)ethyl 2-(4-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl)acetate,
Methyl 2-(3-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)-4-hydroxyphenyl)acetate,
Methyl 2-(4-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)-3-methoxyphenoxy)acetate,
Methyl 2-(4-((2-amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)phenyl) acetate,
(S)-Methyl 2-(3-((2-amino-4-(1-hydroxyhexan-3-ylamino)-6-methylpyrimidin-5-yl)methyl)-4-fluorophenyl)acetate,
(S)-Methyl 2-(4-((2-amino-4-(1-hydroxypentan-2-ylamino)-6-methylpyrimidin-5-yl)methyl)phenyl)acetate,
(S)-Methyl2-(4-((2-amino-4-(1-hydroxyhexan-2-ylamino)-6-methylpyrimidin-5-yl)methyl)phenyl)acetate,
(S)-Methyl 2-(4-((2-amino-4-(1-hydroxyhexan-3-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-fluorophenyl)acetate,
Methyl 2-(4-((2-amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)-3-methoxyphenyl)acetate,
(S)-Methyl 2-(4-((2-amino-4-(1-hydroxypentan-2-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-fluorophenyl)acetate,
(S)-Methyl 2-(4-((2-amino-4-(1-hydroxyhexan-3-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-methoxyphenyl)acetate,
(S)-Methyl 2-(4-((2-amino-4-(1-hydroxyhexan-3-ylamino)-6-methylpyrimidin-5-yl)methyl)phenyl)acetate,
(S)-Methyl 2-(4-((2-amino-4-(1-hydroxyheptan-3-ylamino)-6-methylpyrimidin-5-yl)methyl)phenyl)acetate,
Methyl 2-(4-((N-(3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propyl)-1-methylpiperidine-4-carboxamido)methyl)phenyl)acetate,
Methyl 2-(4-((N-(3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propyl)-2-(methylthio)acetamido)methyl)phenyl)acetate,
(S)-Methyl 2-(4-((2-amino-4-(2-hydroxybutylamino)-6-methylpyrimidin-5-yl)methyl)-3-methoxyphenyl)acetate,
Methyl 2-(3-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)-4-methoxyphenyl)acetate,
3-(Dimethylamino)-2,2-dimethylpropyl 2-(4-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl)acetate,
3-(4-Methylpiperazin-1-yl)propyl 2-(4-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl)acetate,
4-(Dimethylamino)butyl 2-(4-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl)acetate,
3-Morpholinopropyl 2-(4-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl)acetate,
1-Methylpiperidin-4-yl 2-(4-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl)acetate,
(1-Methylpiperidin-4-yl)methyl 2-(4-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl)acetate,
4-(Pyrrolidin-1-yl)butyl 2-(4-((2-amino-4-methyl-6-(pentylamino)pyrimi din-5-yl)methyl)phenyl)acetate,
(1-(2-Methoxyethyl)piperidin-4-yl)methyl 2-(4-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl)acetate,
4-(4-Methylpiperazin-1-yl)butyl 2-(4-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl)acetate,
4-(1,1-Dioxidothiomorpholin-4-yl)butyl(4-{[2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl]methyl}phenyl)acetate,
4-Morpholinobutyl 2-(4-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl)acetate,
2-(1-Methylpiperidin-4-yl)ethyl 2-(4-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl)acetate,
Piperidin-4-ylmethyl 2-(4-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl)acetate,
4-(4-(Dimethylamino)piperidin-1-yl)butyl 2-(4-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl)acetate,
(1-Methylpiperidin-4-yl)methyl 2-(4-((2-amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)phenyl)acetate,
(S)-4-(Dimethylamino)butyl 2-(4-((2-amino-4-(1-hydroxypentan-2-ylamino)-6-methylpyrimidin-5-yl)methyl)phenyl)acetate,
(S)-(1-Methylpiperidin-4-yl)methyl 2-(4-((2-amino-4-(1-hydroxypentan-2-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-methoxyphenyl)acetate,
(1-Methylpiperidin-4-yl)methyl 2-(4-((2-amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)-3-methoxyphenyl)acetate,
4-(Pyrrolidin-1-yl)butyl 2-(4-((2-amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)-3-methoxyphenyl)acetate,
(S)-(1-Methylpiperidin-4-yl)methyl 2-(4-((2-amino-4-(1-hydroxyhexan-3-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-fluorophenyl)acetate,
(S)-Methyl 2-(4-((2-amino-4-(1-hydroxyhexan-3-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-hydroxyphenyl)acetate,
(S)-(1-Methylpiperidin-4-yl)methyl 2-(4-((2-amino-4-(1-hydroxypentan-2-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-hydroxyphenyl)acetate,
Methyl 2-(4-((2-amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)-3-hydroxyphenyl)acetate,
(S)-4-(Pyrrolidin-1-yl)butyl 2-(4-((2-amino-4-(1-hydroxyhexan-3-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-hydroxyphenyl)acetate,
4-(Pyrrolidin-1-yl)butyl 2-(4-((2-amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)-3-hydroxyphenyl)acetate,
(S)-Methyl 2-(3-((2-amino-4-(1-hydroxypentan-2-ylamino)-6-methylpyrimidin-5-yl)methyl)-4-methoxyphenyl)acetate,
(S)-(1-Methylpiperidin-4-yl)methyl 2-(4-((2-amino-4-(2-hydroxybutylamino)-6-methylpyrimidin-5-yl)methyl)phenyl)acetate,
4-(Pyrrolidin-1-yl)butyl 2-(4-((2-amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)phenyl)acetate,
(1-Methylpiperidin-4-yl)methyl 2-(3-((2-amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)-4-methoxyphenyl)acetate,
4-(Pyrrolidin-1-yl)butyl 2-(3-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl)acetate,
(1-Methylpiperidin-4-yl)methyl 2-(3-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl)acetate,
(S)-4-(Dimethylamino)butyl 2-(4-((2-amino-4-(1-hydroxyhexan-3-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-fluorophenyl)acetate,
(S)-4-(4-Methylpiperazin-1-yl)butyl 2-(4-((2-amino-4-(1-hydroxyhexan-3-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-fluorophenyl)acetate,
(S)-Methyl 2-(4-((2-amino-4-(1-hydroxypentan-2-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-hydroxyphenyl)acetate,
2-Hydroxyethyl 2-(4-((2-amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)-3-methoxyphenyl)acetate,
4-(4-(Dimethylamino)piperidin-1-yl)butyl2-(4-((2-amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)-3-methoxyphenyl)acetate,
4-Hydroxybutyl 2-(4-((2-amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)-3-methoxyphenyl)acetate,
3-(Methylsulfonyl)propyl 2-(4-((2-amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)-3-methoxyphenyl)acetate,
3-Hydroxypropyl 2-(4-((2-amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)-3-methoxyphenyl)acetate,
(S)-4-(Dimethylamino)butyl 2-(4-((2-amino-4-(1-hydroxyhexan-3-ylamino)-6-methylpyrimidin-5-yl)methyl)phenyl)acetate,
(1-Methylpiperidin-4-yl)methyl 2-(4-(2-amino-4-(butylamino)-6-methylpyrimidin-5-ylthio)phenyl)acetate,
4-(Pyrrolidin-1-yl)butyl 2-(4-(2-amino-4-(butylamino)-6-methylpyrimidin-5-ylthio)phenyl)acetate,
4-(Dimethylamino)butyl 2-(3-((2-amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)-4-methoxyphenyl)acetate,
Methyl 2-(3-((2-amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)-4-methoxyphenyl)acetate,
Methyl 2-(3-((2-amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)-4-hydroxyphenyl)acetate,
(S)-2-(1-Methylpiperidin-4-yl)ethyl 2-(4-((2-amino-4-(1-hydroxyhexan-3-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-fluorophenyl)acetate,
2-(4-Methylthiazol-5-yl)ethyl 2-(4-((2-amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)-3-methoxyphenyl)acetate,
(1-Methylpiperidin-4-yl)methyl 2-(4-((2-amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)-3-hydroxyphenyl)acetate,
4-(Dimethylamino)butyl2-(4-((2-amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)-3-hydroxyphenyl)acetate,
or pharmaceutically acceptable salts thereof.
[0037] It should be noted that each of the chemical compounds listed above represents a
particular and independent aspect of the invention.
[0038] The present invention further provides a process for the preparation of a compound
of formula (1) or a pharmaceutically acceptable salt thereof as defined above which
comprises
- (a) when R2 represents a group of formula (1a), reacting a compound of formula (II)

wherein j, X1, X2, R1, R3, R4, R5 and R7 are as defined in formula (I), with a compound of formula (III), R6-OH, where R6 is as defined in formula (I); or
- (b) when R represents a group of formula (Ib), reacting a compound of formula (IV)

wherein n, A, X3, X4, Y1, Z1 , R1 , R3, R4, R5a and R9 are as defined in formula (I), with a compound of formula (V), R8-OH, where R8 is as defined in formula (I); or
- (c) when R2 represents a group of formula (Ib) in which X3 represents NH and Y1 represents C1-C6 alkylene, reacting a compound of formula (VI)

wherein R1, R3, R4 and Z1 are as defined in formula (I), with a compound of formula (VII)

wherein Y2 represents -(C1-C5alkyl)j-CHO, j is 0 or 1, and A, n, X4, R5a , R8 and R9 are as defined in formula (I);
and optionally after (a), (b) or (c) carrying out one or more of the following procedures:
● converting a compound of formula (I) into another compound of formula (I)
● removing any protecting groups
● forming a pharmaceutically acceptable salt.
[0039] Process (a) may be carried out under acidic conditions in the presence of, for example,
hydrochloric or sulphuric acid and the appropriate alcohol of formula (III) as solvent.
Alternatively, the reaction may be carried out by activation of the formula (II) acid
with a coupling agent such as PyBop (benzotriazol-1-yloxytripyrrolidinophosphonium
hexafluorophosphate) or HATU (O-(7-azabezotriazol-1-yl)-N,N,N';N'-tetramethyluronium
hexafluorophosphate) in an organic solvent such as
N-methylpyrrolidinone,
N,N-dimethylformamide, acetonitrile or tetrahydrofuran, usually in the presence of a suitable
base (e.g. triethylamine, Hunigs base) at a temperature, for example, in the range
from 0 to 50°C.
[0040] Process (b) may be carried out in an analogous manner to process (a).
[0041] Process (c) may conveniently be carried out in the presence of a suitable reducing
agent (e.g. sodium triacetoxyborohydride) in an organic solvent such as 1-methyl-2-pyrrolidinone,
1,2-dichloroethane or tetrahydrofuran at a temperature, for example, in the range
from 0 to 150°C. Alternatively, an imine intermediate can be pre-formed by stirring
the compounds of formulae (VI) and (VII) in a suitable solvent such as tetrahydrofuran,
optionally in the presence of an acid, such as acetic acid, at a temperature, for
example, in the range from room temperature to 150°C. A reducing agent, such as sodium
borohydride, can then be added to give a compound of formula (I) when R
2 represents a group of formula (Ib).
[0042] A compound of formula (IV) may be prepared by reacting a compound of formula (VI)
with a compound of formula (VIIa) in which the substituents have the meanings defined
in formula (VII), using process (c) above

[0043] Alternatively, compounds of formula (IV) may be prepared by dealkylating a corresponding
compound of formula (I) according to techniques known in the art.
[0044] Compounds of formula (II) in which X
1 represents CH
2, X
2 represents a bond and R
5 represents a hydrogen atom may be prepared as described in the following reaction
scheme 1 in which j, R
1, R
3, R
4 and R
7 are as defined in formula (II), Et represents an ethyl group, LG represents a leaving
group and R
40 represents a C
1-C
6 alkyl group.

[0045] Compounds of formula (C) may be prepared by reacting a compound of formula (B) with
a base, such as sodium hydride, in a suitable solvent such as tetrahydrofuran or
N,N-dimethylformamide at a temperature, for example, from 0°C to room temperature (20°C),
followed by addition of a compound of formula (A). The reaction is then preferably
heated at a temperature, for example, from 50°C to 100°C, optionally in the presence
of an additive such as potassium iodide.
[0046] Compounds of formula (D) may be prepared by reacting a compound of formula (C) with
guanidine or guanidine carbonate in a suitable solvent such as methanol or ethanol
at a temperature, for example, in the range from 50°C to 150°C.
[0047] Compounds of formula (E) may be prepared by reacting a compound of formula (D) with
phosphorous oxychloride, at a temperature, for example, from 50°C to 110°C. Compounds
of formula (F) may be prepared by reacting a compound of formula (E) with excess of
an amine of formula R
3R
4NH, in a suitable solvent such as butanol or 1,2-dioxane at a temperature, for example,
from 50°C to 150°C. Alternatively, the reaction can be performed in a microwave at
a temperature, for example, from 50°C to 200°C.
[0048] Compounds of formula (G) may be prepared by reacting a compound of formula (F) with
a reducing agent, such as lithium aluminium hydride, in a suitable solvent such as
tetrahydrofuran at a temperature, for example, from 0°C to 60°C.
[0049] Compounds of formula (H) may be prepared by reacting a compound of formula (G) with
a chlorinating agent, such as thionyl chloride, in a suitable solvent such as dichloromethane
at a temperature, for example, from 0°C to 50°C.
[0050] Compounds of formula (J) may be prepared by reacting a compound of formula (H) with
a cyanide salt, such as potassium cyanide, in a suitable solvent such as dimethylsulfoxide
or
N,N-dimethylformamide (or a mixture of both solvents) at a temperature, for example,
from room temperature to 50°C.
[0051] Compounds of formula (II) may be prepared by reacting a compound of formula (J) with
an alkali base, such as potassium hydroxide, in a suitable solvent such as methanol
or ethanol and water at a temperature, for example, from 50°C to 100°C.
[0052] Alternatively the order of the steps in reaction scheme 1 may be changed, for example,
a compound of formula (E) can be subjected to steps (v) to (vi) then displaced by
an amine R
3R
4NH as in step (iv).
[0053] In reaction scheme 1, compounds of formula (A) may be prepared easily using known
techniques. For example, a compound of formula (A), designated (Av) in which LG represents
a leaving group, R
40 represents a C
1-C
6 alkyl group, j is 1 and R
7 is hydroxyl protected by a protecting group P
1,

may be prepared by the following route:

[0054] Compounds of formula (Aii) may be prepared by reacting a compound of formula (Ai)
with an alkylating agent of formula, P
1LG, where LG is a leaving group and P
1 represents a suitable hydroxyl-protecting group such as methyl or benzyl, in the
presence of a base such as potassium carbonate, in a suitable solvent such as tetrahydrofuran
or
N,N-dimethylformamide at a temperature, for example, from room temperature to 100°C.
[0055] Compounds of formula (Aiii) may be prepared by reacting a compound of formula (Aii)
with a reducing agent, for example, diisobutylaluminium hydride (DIBAL-H) in a suitable
solvent such as tetrahydrofuran at a temperature, for example, from -60°C to room
temperature.
[0056] Compounds of formula (Aiv) may be prepared by carbonylating a compound of formula
(Aiii) in the presense of an alcohol, R
40 OH. The reaction may be performed in a carbonylator under a pressure of carbon monoxide
(1-5 bar) with a palladium catalyst, such as dichloro[1,1'-bis(diphenylphosphino)ferrocene]Pd
(II) dichloromethane adduct, at a temperature from 30°C to 150°C.
[0057] Compounds of formula (Av), where LG is a chloride leaving group, may be prepared
by reacting a compound of formula (Aiv), with a chlorinating agent, such as thionyl
chloride, in a suitable solvent such as dichloromethane at a temperature, for example,
from 0°C to 50°C.
[0058] Compounds of formula (F) can also be prepared by reaction of a compound of formula
(VIII) with excess of an amine of formula R
3R
4NH, where j, R
1, R
3, R
4, R
7 and R
40 are as defined above and R
41 is defined as a C
1-C
6 alkyl or a phenyl ring substituted by one or more C
1-C
6 alkyl groups.

[0059] The reaction may be carried out in a suitable solvent such as butanol or 1,2-dioxane
at a temperature, for example, from 50°C to 150°C. Alternatively, the reaction can
be performed in a microwave at a temperature, for example, from 50°C to 200°C.
[0060] A compound of formula (VIII) may be prepared by reacting a compound of formula (D)
with a compound of formula (IX),
41RSO
2Cl. The reaction may be carried out in a suitable solvent, such as DCM, and a base
such as triethylamine or Hunigs base at a temperature, for example, from 0°C to 50°C.
[0061] A compound of formula (J) may also be prepared by reaction of a compound of formula
(VIIIa) with an amine of formula R
3R
4NH

in which the substituents have the meanings defined above. A compound of formula (VIIIa)
may be prepared from a compound of formula (VIIIb) using the schemes and reaction
conditions above.
[0062] A compound of formula (VIIIb) may prepared according to reaction scheme 1 steps (i)
and (ii) by substituting the compound of formula (A) with a compound of formula (VIIIc)
in which LG represents a leaving group, P represents a hydroxyl-protecting group and
j and R
7 are as defined in formula (VIIIb), followed by removal of the hydroxyl-protecting
group P,

[0063] Compounds of formula (C) can also be prepared by reduction of a compound of formula
(X)

wherein j, R
1, R
7 and R
40 are as defined above. The reaction may be carried out with a catalyst such as palladium
on carbon under a hydrogen atmosphere (1-20 bar) in a suitable solvent-such as ethanol
at a temperature, for example, from 20°C to 100°C.
[0064] A compound of formula (X) can be prepared by reaction of a compound of formula (B)
with a compound of formula (XI)

wherein j, R
7 and R
40 are as defined above. The reaction may be carried out in the presence of acetic acid
and piperidine in a suitable solvent such as toluene at a temperature, for example,
from 50°C to 150°C.
[0065] Compounds of formula (J) may also be prepared as described in the following reaction
scheme 1a:

[0066] Compounds of formula (c) may be prepared by a Heck reaction between a compound of
formula (b) and a compound of formula (a) where Hal = bromine or iodine and j, R
1 and R
7 are as defined in reaction scheme 1. The reaction may be carried out using a palladium
catalyst, such as Pd(OAc)
2 or Pd-118, a base such as sodium hydrogencarbonate or dicyclohexylmethylamine, and
tetrabutylammoniun chloride or bromide. The reaction is performed in a suitable solvent
such as tetrahydrofuran or dimethylacetamide at a temperature, for example, from 50°C
to 150°C.
[0067] Compounds of formula (d) may be prepared by reacting a compound of formula (c) with
guanidine or guanidine carbonate in a suitable solvent such as methanol or ethanol
at a temperature, for example, in the range from 50°C to 150°C.
[0068] Compounds of formula (e), where LG is a leaving group such as halogen or an alkylsulphonyl
or benzylsulphonyl group, may be prepared by reacting a compound of formula (d) with
phosphorous oxychloride, at a temperature, for example, from 50°C to 110°C. Alternatively
a compound of formula (e) may be prepared by reacting a compound of formula (d) with,
for example, an alkylsulphonyl chloride. The reaction is conveniently carried out
in a solvent, such as dichloromethane, in the presence of a base such as triethylamine
or Hunigs base at a temperature, for example, from 0°C to 50°C.
[0069] Compounds of formula (J) may be prepared by reacting a compound of formula (e) with
excess of an amine of formula R
3R
4NH, in a suitable solvent such as butanol or 1,4-dioxane at a temperature, for example,
from 50°C to 150°C. Alternatively, the reaction can be performed in a microwave at
a temperature, for example, from 50°C to 200°C.
[0070] Compounds of formula (a) are commercially available or may be prepared easily using
known techniques. For example, a compound of formula (a), designated (av), in which
Hal is iodine, j is 1 and R
7 is hydroxyl protected by a protecting group P
1 (e.g. methyl, ethyl or benzyl)

may be prepared using the route below.

[0071] Compounds of formula (aii) may be prepared by reacting a compound of formula (ai)
with a reducing agent, for example, borane-tetrahydrofuran complex, in a suitable
solvent such as tetrahydrofuran at a temperature, for example, from room temperature
to 80°C.
[0072] Compounds of formula (aiii) may be prepared by reacting a compound of formula (aii)
with an alkylating agent of formula, P
1LG, where LG is a leaving group and P
1 is a hydroxyl-protecting group, in the presence of a base such as potassium carbonate,
in a suitable solvent such as tetrahydrofuran or
N,N-dimethylformamide, at a temperature, for example, from room temperature to 100°C.
[0073] Compounds of formula (aiv), where LG is a chloride leaving group, may be prepared
by reacting a compound of formula (aiii), with a chlorinating agent, such as thionyl
chloride, in a suitable solvent such as dichloromethane at a temperature, for example,
from 0°C to 50°C.
[0074] Compounds of formula (av) may be prepared by reacting a compound of formula (aiv)
with a cyanide salt, such as potassium cyanide, in a suitable solvent such as dimethylsulfoxide
or
N,N-dimethylformamide (or a mixture of both solvents) at a temperature, for example,
from room temperature to 50°C.
[0075] A compound of formula (I), where R
2 represents a group of formula (Ia) in which X
1 represents CH
2, X
2 represents a bond and R represents a hydrogen atom, may be prepared by reacting a
compound of formula (f)

in which LG represents a leaving group and j, R
1, R
6 and R
7 are as defined in formula (I), with an amine of formula R
3R
4NH in which R
3 and R
4 are as defined in formula (I), in a suitable solvent such as 1,4-dioxane at a temperature,
for example, from 50°C to 150°C. Alternatively, the reaction can be performed in a
microwave at a temperature, for example, from 50°C to 200°C.
[0076] A compound of formula (f) may be prepared according to reaction scheme 1a above,
starting with a compound of formula (c1).

[0077] A compound of formula (c1) may be prepared according to reaction scheme 1a step (i)
using an appropriate aromatic bromide or iodide (g), or from a compound (h) or (j)
using the methods hereinbefore described:

[0078] A compound of formula (C) in reaction scheme 1 may also be prepared using Heck chemistry
as above with a compound of formula (k):

[0079] Compounds of formula (J) in reaction scheme 1a may also be prepared from a compound
of formula (c) where LG is chloro, by a palladium catalysed coupling reaction with
a protected amino-alcohol of formula (P
a),

[0080] The reaction may be performed in a suitable solvent such as 1,4-dioxane with a palladium
catalyst formed from palladium acetate and 9,9-dimethyl-4,5-bis(diphenylphosphino)
xanthene and a base such as potassium carbonate. The reaction may be performed at
a temperature, for example, from 50°C to 150°C.
[0081] A compound of formula (II) in which X
1 represents a sulphur atom may be prepared by reacting a compound of formula (XII)
with a compound of formula (XIII) or (XIIIa) in which j, R
1, R
7 and R
40 are as defined above, and then by following the steps in reaction scheme 1 from formula
(D), or the compound of formula (II) may be prepared from the compound of formula
(XIIIb) in which j, R
1 and R
7 are as defined above, following reaction scheme 1 steps (vi)-(vii), (iii)-(iv) and
then (viii).

[0082] The reaction may be carried out in a suitable solvent, such as ethylene glycol, and
a base such as potassium carbonate at a temperature, for example, from 80°C to 200°C.
[0083] A compound of formula (II) in which X
1 represents an oxygen atom may be prepared by reacting a compound of formula (XIV)
with a compound of formula (XV), where R
42 represents a suitable leaving group and j, R
1 , R
7 and R
40 are as defined above, and then by following the steps in reaction scheme 1 from formula
(C)

The reaction may be carried out in a suitable solvent, such as tetrahydrofuran, and
a base such as potassium carbonate at a temperature, for example, from 20°C to 100°C.
[0084] A compound of formula (II) in which X
1 represents a group NH may be prepared by reacting a compound of formula (XVI) with
a compound of formula (XVII) where and j, R
1, R
7 and R
40 are as defined above, then by following the steps in reaction scheme 1 from formula
(C). The benzyl protecting group may be removed by hydrogenation at a convenient step
in the route.

[0085] The reaction may be carried out in a suitable solvent, such as toluene, and a catalyst
such as rhodium acetate at a temperature, for example, from 50°C to 150°C.
[0086] Compounds of formula (VI) in which Z
1 represents a linear C
3-C
6 alkylene group may be prepared according to the following reaction scheme 2 in which
PG represents a nitrogen-protecting group and R
1, R
3 and R
4 are as defined in formula (I).

[0087] Compounds of formula (L) may be prepared by reacting a compound of formula (K) with
excess of an amine of formula R
3R
4NH where R
3 and R
4 are as defined above, in a suitable solvent such as butanol or 1,2-dioxane at a temperature,
for example, from 50°C to 150°C. Alternatively the reaction can be performed in a
microwave at a temperature, for example, from 50°C to 200°C.
[0088] Compounds of formula (M) may be prepared by reacting a compound of formula (L) with
iodine in the presence of a base such as sodium hydroxide, in a suitable organic solvent
such as dichloromethane and with water. The reaction is preferably performed at a
temperature, for example, from 50°C to 150°C.
[0089] Compounds of formula (N) may be prepared by reacting a compound of formula (M) with
a compound of formula (XVIII), HC≡C(CH
2)
1-4N-PG, where PG is a nitrogen-protecting group. The reaction may be carried out in
the presence of a palladium catalyst such as tetrakis(triphenylphosphine)palladium
(0), copper(I) iodide and a base such as triethylamine. The reaction may be carried
out in a suitable solvent, such as tetrahydrofuran, at a temperature, for example,
from 50°C to 150°C.
[0090] Compounds of formula (P) may be prepared by the reduction of a compound of formula
(N) under hydrogenation conditions. The reaction may be carried out with a catalyst
such as palladium on carbon under a hydrogen atmosphere (1-20 bar) in a suitable solvent
such as ethanol at a temperature, for example, from 20°C to 100°C.
[0091] Compounds of formula (VI) may be prepared by removing the nitrogen-protecting group
from a compound of formula (P) according to techniques known in the art.
[0092] Alternatively the order of the steps in scheme 2 may be changed as follows:

[0093] Compounds of formula (P) may also be prepared according to reaction scheme 4, where
LG
1 is a leaving group and R
1 and PG are as defined above.

Compounds of formula (Q) and (R) can be prepared in a similar method as shown above.
[0094] A compound of formula (S) can be prepared from a compound of formula (R) by activation
of the hydroxyl group. When LG
1 represents chlorine the reaction may be performed by reacting a compound of formula
(R) with phosphorous oxychloride, at a temperature, for example, from 50°C to 110°C.
Alternatively when LG
1 represents OSO
2R
41 as defined in formula (VIII), a compound of formula (R) may be reacted with a compound
of formula
41RSO
2Cl. The reaction may be carried out in a suitable solvent, such as dichloromethane,
and a base such as triethylamine or Hunigs base at a temperature, for example, from
0°C to 50°C.
[0095] Compounds of formula (P) may be prepared by reacting a compound of formula (S) with
excess of an amine of formula R
3R
4NH where R
3 and R
4 are as defined above, in a suitable solvent such as butanol or 1,2-dioxane at a temperature,
for example, from 50°C to 150°C. Alternatively the reaction can be performed in a
microwave at a temperature, for example, from 50°C to 200°C.
[0096] Compounds of formulae (III), (V), (VI), (VII), (VIIa), (VIII), (VIIIa), (VIIIb),
(VIIIc), (IX), (X), (XI), (XII), (XIII), (XIIIa), (XIIIb), (XIV), (XV), (XVI), (XVII),
(XVIII) and further compounds of formula (II) are either commercially available, are
well known in the literature or may be prepared easily using known techniques.
[0097] Compounds of formula (I) may be converted to other compounds of formula (I) using
conventional methods. For example, a compound of formula (I) in which R
2 represents a group of formula (Ib) and X
3 is NH can be converted to a corresponding compound of formula (I) in which X
3 is >NSO
2R
12 by reaction with a compound of formula R
12SO
2Cl. The reaction is suitably carried out in an organic solvent such as dichloromethane
or acetonitrile, in the presence of a base such as pyridine or triethylamine. Temperatures
in the range from 0°C to 80°C are suitably employed.
[0098] Further, a compound of formula (I) in which R
2 represents a group of formula (Ib) and X
3 is NH can be converted to a corresponding compound of formula (I) in which X
3 is >NCOR
12 by reaction with a compound of formula R
12 COCl. The reaction is suitably carried out in an organic solvent such as dichloromethane
or acetonitrile, in the presence of a base such as pyridine or triethylamine. Temperatures
in the range from 0°C to 80°C are suitably employed. Alternatively the reaction may
be carried out by activation of an acid of formula R
12CO
2H with a coupling agent such as HATU or PyBOP in an organic solvent such as N-methylpyrrolidinone,
N,N-dimethylformamide, acetonitrile or tetrahydrofuran usually in the presence of a suitable
base (e.g. triethylamine, Hunigs base) at a temperature, for example, in the range
from 0°C to 50°C.
[0099] Still further, a compound of formula (I) in which R
2 represents a group of formula (Ib) and X
3 is NH can be converted to a corresponding compound of formula (I) in which X
3 is >NCOCH
2NR
15R
16 by reaction with chloroacetyl chloride followed by an amine of formula R
15R
16NH. The first stage is suitably carried out in an organic solvent such as dichloromethane
or acetonitrile, with one equivalent of chloroacetyl chloride. Temperatures in the
range from 0°C to 30°C are suitably employed. In the second stage the reaction is
suitably carried out in an organic solvent such as dichloromethane or acetonitrile,
with excess of an amine R
15R
16NH. Temperatures in the range from 0°C to 100°C are suitably employed.
[0100] A compound of formula (I), where R
2 represents a group of formula (Ib) and X
3 represents NR
12CO or NR
12SO
2 may be prepared by reacting a compound of formula (XIX) with a compound of formula
(XX)

where R
50 represents SO
2-LG
2 or CO-LG
2, LG
2 is a suitable leaving group such as chlorine and the remaining substituents are as
defined in formula (I). The reaction is suitably carried out in an organic solvent
such as dichloromethane or acetonitrile, in the presence of a base such as pyridine
or triethylamine. Temperatures in the range from 0°C to 80°C are suitably employed.
Alternatively when R
50 = CO
2H, the reaction may be carried out by activation with a coupling agent such as HATU,
T
3P (1-propanephosphonic acid cyclic anhydride) or PyBOP in an organic solvent such
as
N-methylpyrrolidinone,
N,N-dimethylformamide, acetonitrile or tetrahydrofuran usually in the presence of a suitable
base (e.g. triethylamine, Hunigs base) at a temperature, for example, in the range
from 0°C to 50°C.
[0101] A compound of formula (IV) where R
2 represents a group of formula (Ib) and X
3 represents NR
12CO or NR
12SO
2, may be prepared by reaction of a compound of formula (XIX) with a compound of formula
(XXI) using similar conditions to those above.

[0102] A compound of formula (XIX) may be prepared by reacting a compound of formula (VI)
with an aldehyde or ketone under standard reductive amination conditions.
[0103] A compound of formula (II) where R
2 represents a group of formula (XXII) may be prepared by reacting a compound of formula
(XXIII) with a compound of formula (XXIV)

where R
43 is H or methyl and R
1, R
3, R
4 are as defined above. The reaction may be carried out under acid conditions, for
example, in aqueous hydrochloric acid at elevated temperature.
[0104] A compound of formula (XXIII) may be prepared according to scheme 5:

[0105] A compound of formula (A2) may be prepared by reacting a compound of formula (A1)
with an amine of formula R
3R
4NH. The reaction may be carried out in the presence of a base such as triethylamine
in an organic solvent such as methanol. Temperatures in the range of 50-100°C are
preferred.
[0106] A compound of formula (A3), where R
1 is methyl, may be prepared by reacting a compound of formula (A2) with tetramethylstannane.
The reaction may be carried out in the presence of a catalyst such as Pd(PPh
3)
4 in an organic solvent such as dimethylformamide. Temperatures in the range of 50-120°C
are preferred. A compound of formula (A3), where R
1 is alkoxy or alkylthiol, may be prepared by reacting a compound of formula (A2) with
the appropriate alcohol, or alkylthiol in the presence of a base such as sodium hydride.
[0107] A compound of formula (A4) may be prepared by reacting a compound of formula (A3)
with a reducing agent such as sodium borohydride. The reaction may be carried out
in an organic solvent such as methanol at a temperature in the range of 0-50°C.
[0108] A compound of formula (I) where R
2 represents a group of formula (Ia), wherein X
1 is CH
2 and X
2 is O may be prepared by reacting a compound of formula (XXV) with a compound of formula
(XXVI)

where LG
3 is a leaving group such as chlorine, bromine or mesylate and j, R
1, R
3, R
4, R
5, R
6 and R
7 are as defined in formula (I). The reaction may be carried out in the presence of
a base such as potassium carbonate in an organic solvent such as dimethylformamide
at a temperature in the range from 20-100°C.
[0109] A compound of formula (XXV) may be prepared according to scheme 6 below:

where j, R
1, R
3, R
4 and R
7 are as defined above and P' is hydrogen or a protecting group.
[0110] Compounds of formula (B2) may be prepared by reacting a compound of formula (B1)
with guanidine or guanidine carbonate in a suitable solvent such as methanol or ethanol
at a temperature, for example, in the range from 50°C to 150°C.
[0111] Compounds of formula (B3) may be prepared in two steps by reacting a compound of
formula (B2) with a compound of formula
41RSO
2Cl, followed with an amine of formula R
3R
4NH. The first step may be carried out in a suitable solvent, such as DCM, and a base
such as triethylamine or Hunigs base at a temperature, for example, from 0°C to 50°C.
The second step may be carried out in a suitable solvent such as butanol or 1,2-dioxane
at a temperature, for example, from 50°C to 150°C. Alternatively the reaction can
be performed in a microwave at a temperature, for example, from 50°C to 200°C.
[0112] A compound of formula (I) where R
2 represents a group of formula (Ib), wherin X
3 is NR
12CONR
13 or NR
13CONR
12 may be prepared by reacting a compound of formula (XXVII) with a compound of formula
(XXVIII)

where R
51 is defined as Cl-C(O)NR
12/R
13- and n, R
1, R
3, R
4, R
12, R
13, Z
1, Y
1, A, X
4, R
9, R
5a and R
8 are as defined above. The reaction may be carried out in a suitable solvent, such
as dichloromethane, and a base such as triethylamine or Hunigs base at a temperature,
for example, from 0°C to 50°C.
[0113] A compound of formula (I) where R
2 represents a group of formula (Ib) may be prepared from a compound of formula (XXIX)
or (XXX) using the same methods as in scheme 1 and the enabling chemistry above. This
route is suitable, for example, where X
3 in formulae (XXIX) and (XXX) is S(O)
p or O.

[0114] Compounds of formulae (XIX), (XX), (XXI), (XXII), (XXIII), (XXIV), (XXV), (XXVI),
(XXVII), (XXVIII), (XXIX) and (XXX) are either commercially available, are well known
in the literature or may be prepared easily using known techniques.
[0115] It will be appreciated by those skilled in the art that in the processes of the present
invention certain functional groups such as phenol, hydroxyl or amino groups in the
reagents may need-to be protected by protecting groups. Thus, the preparation of the
compounds of formula (I) may involve, at an appropriate stage, the removal of one
or more protecting groups.
[0117] The compounds of formula (I) above may be converted to a pharmaceutically acceptable
salt thereof, preferably an acid addition salt such as a hydrochloride, hydrobromide,
benzenesulphonate (besylate), saccharin (e.g. monosaccharin), trifluoroacetate, sulphate,
phosphate, acetate, fumarate, maleate, tartrate, lactate, citrate, pyruvate, succinate,
oxalate, 1-hydroxy-2-napthoate (xinafoate), methanesulphonate or
p-toluenesulphonate salt.
[0118] Compounds of formula (I) are capable of existing in stereoisomeric forms. It will
be understood that the invention encompasses the use of all geometric and optical
isomers (including atropisomers) of the compounds of formula (I) and mixtures thereof
including racemates. The use of tautomers and mixtures thereof also form an aspect
of the present invention. Enantiomerically pure forms are particularly desired.
[0119] The compounds of formula (I) and their pharmaceutically acceptable salts have activity
as pharmaceuticals, in particular as modulators of toll-like receptor (especially
TLR7) activity, and thus may be used in the treatment of:
- 1. respiratory tract: obstructive diseases of the airways including: asthma, including
bronchial, allergic, intrinsic, extrinsic, exercise-induced, drug-induced (including
aspirin and NSAID-induced) and dust-induced asthma, both intermittent and persistent
and of all severities, and other causes of airway hyper-responsiveness; chronic obstructive
pulmonary disease (COPD); bronchitis, including infectious and eosinophilic bronchitis;
emphysema; bronchiectasis; cystic fibrosis; sarcoidosis; farmer's lung and related
diseases; hypersensitivity pneumonitis; lung fibrosis, including cryptogenic fibrosing
alveolitis, idiopathic interstitial pneumonias, fibrosis complicating anti-neoplastic
therapy and chronic infection, including tuberculosis and aspergillosis and other
fungal infections; complications of lung transplantation; vasculitic and thrombotic
disorders of the lung vasculature, and pulmonary hypertension; antitussive activity
including treatment of chronic cough associated with inflammatory and secretory conditions
of the airways, and iatrogenic cough; acute and chronic rhinitis including rhinitis
medicamentosa, and vasomotor rhinitis; perennial and seasonal allergic rhinitis including
rhinitis nervosa (hay fever); nasal polyposis; acute viral infection including the
common cold, and infection due to respiratory syncytial virus, influenza, coronavirus
(including SARS) and adenovirus;
- 2. skin: psoriasis, atopic dermatitis, contact dermatitis or other eczematous dermatoses,
and delayed-type hypersensitivity reactions; phyto- and photodermatitis; seborrhoeic
dermatitis, dermatitis, herpetiformis, lichen planus, lichen sclerosus et atrophica,
pyoderma gangrenosum, skin sarcoid, discoid lupus erythematosus, pemphigus, pemphigoid,
epidermolysis bullosa, urticaria, angioedema, vasculitides, toxic erythemas, cutaneous
eosinophilias, alopecia areata, male-pattern baldness, Sweet's syndrome, Weber-Christian
syndrome, erythema multiforme; cellulitis, both infective and non-infective; panniculitis;cutaneous
lymphomas, non-melanoma skin cancer and other dysplastic lesions; drug-induced disorders
including fixed drug eruptions;
- 3. eyes: blepharitis; conjunctivitis, including perennial and vernal allergic conjunctivitis;
iritis; anterior and posterior uveitis; choroiditis; autoimmune, degenerative or inflammatory
disorders affecting the retina; ophthalmitis including sympathetic ophthalmitis; sarcoidosis;
infections including viral , fungal, and bacterial;
- 4. genitourinary: nephritis including interstitial and glomerulonephritis; nephrotic
syndrome; cystitis including acute and chronic (interstitial) cystitis and Hunner's
ulcer; acute and chronic urethritis, prostatitis, epididymitis, oophoritis and salpingitis;
vulvo-vaginitis; Peyronie's disease; erectile dysfunction (both male and female);
- 5. allograft rejection: acute and chronic following, for example, transplantation
of kidney, heart, liver, lung, bone marrow, skin or cornea or following blood transfusion;
or chronic graft versus host disease;
- 6. other auto-immune and allergic disorders including rheumatoid arthritis, irritable
bowel syndrome, systemic lupus erythematosus, multiple sclerosis, Hashimoto's thyroiditis,
Graves' disease, Addison's disease, diabetes mellitus, idiopathic thrombocytopaenic
purpura, eosinophilic fasciitis, hyper-IgE syndrome, antiphospholipid syndrome and
Sazary syndrome;
- 7. oncology: treatment of common cancers including prostate, breast, lung, ovarian,
pancreatic, bowel and colon, stomach, skin and brain tumors and malignancies affecting
the bone marrow (including the leukaemias) and lymphoproliferative systems, such as
Hodgkin's and non-Hodgkin's lymphoma; including the prevention and treatment of metastatic
disease and tumour recurrences, and paraneoplastic syndromes; and,
- 8. infectious diseases: virus diseases such as genital warts, common warts, plantar
warts, hepatitis B, hepatitis C, herpes simplex virus, molluscum contagiosum, variola,
human immunodeficiency virus (HIV), human papilloma virus (HPV), cytomegalovirus (CMV),
varicella zoster virus (VZV), rhinovirus, adenovirus, coronavirus, influenza, para-influenza;
bacterial diseases such as tuberculosis and mycobacterium avium, leprosy; other infectious
diseases, such as fungal diseases, chlamydia, candida, aspergillus, cryptococcal meningitis,
pneumocystis carnii, cryptosporidiosis, histoplasmosis, toxoplasmosis, trypanosome
infection and leishmaniasis.
[0120] Thus, the present invention provides a compound of formula (I) or a pharmaceutically-acceptable
salt thereof as hereinbefore defined for use in therapy.
[0121] In a further aspect, the present invention provides the use of a compound of formula
(I) or a pharmaceutically acceptable salt thereof as hereinbefore defined in the manufacture
of a medicament for use in therapy.
[0122] In the context of the present specification, the term "therapy" also includes "prophylaxis"
unless there are specific indications to the contrary. The terms "therapeutic" and
"therapeutically" should be construed accordingly.
[0123] Prophylaxis is expected to be particularly relevant to the treatment of persons who
have suffered a previous episode of, or are otherwise considered to be at increased
risk of, the disease or condition in question. Persons at risk of developing a particular
disease or condition generally include those having a family history of the disease
or condition, or those who have been identified by genetic testing or screening to
be particularly susceptible to developing the disease or condition.
[0124] In particular, the compounds of the invention (including pharmaceutically acceptable
salts) may be used in the treatment of asthma, COPD, allergic rhinitis, allergic conjunctivitis,
atopic dermatitis, cancer, hepatitis B, hepatitis C, HIV, HPV, bacterial infections
and dermatosis.
[0125] The invention still further provides a method of treating, or reducing the risk of,
a disease or condition comprising or arising from abnormal cell growth (e.g. a cancer),
which method comprises administering to a patient in need thereof a therapeutically
effective amount of a compound of formula (I) or a pharmaceutically acceptable salt
thereof as hereinbefore defined.
[0126] The invention also provides a method of treating, or reducing the risk of, an obstructive
airways disease or condition (e.g. asthma or COPD) which comprises administering to
a patient in need thereof a therapeutically effective amount of a compound of formula
(I) or a pharmaceutically acceptable salt thereof as hereinbefore defined.
[0127] For the above-mentioned therapeutic uses the dosage administered will, of course,
vary with the compound employed, the mode of administration, the treatment desired
and the disorder indicated. For example, the daily dosage of the compound of the invention,
if inhaled, may be in the range from 0.05 micrograms per kilogram body weight (µg/kg)
to 100 micrograms per kilogram body weight (µg/kg). Alternatively, if the compound
is administered orally, then the daily dosage of the compound of the invention may
be in the range from 0.01 micrograms per kilogram body weight (µg/kg) to 100 milligrams
per kilogram body weight (mg/kg).
[0128] The compounds of formula (I) and pharmaceutically acceptable salts thereof may be
used on their own but will generally be administered in the form of a pharmaceutical
composition in which the formula (I) compound/salt (active ingredient) is in association
with a pharmaceutically acceptable adjuvant, diluent or carrier. Conventional procedures
for the selection and preparation of suitable pharmaceutical formulations are described
in, for example, "
Pharmaceuticals - The Science of Dosage Form Designs", M. E. Aulton, Churchill Livingstone,
1988.
[0129] Depending on the mode of administration, the pharmaceutical composition will preferably
comprise from 0.05 to 99 %w (per cent by weight), more preferably from 0.05 to 80
%w, still more preferably from 0.10 to 70 %w, and even more preferably from 0.10 to
50 %w, of active ingredient, all percentages by weight being based on total composition.
[0130] The present invention also provides a pharmaceutical composition comprising a compound
of formula (I) or a pharmaceutically acceptable salt thereof as hereinbefore defined,
in association with a pharmaceutically acceptable adjuvant, diluent or carrier.
[0131] The invention further provides a process for the preparation of a pharmaceutical
composition of the invention which comprises mixing a compound of formula (I) or a
pharmaceutically acceptable salt thereof as hereinbefore defined with a pharmaceutically
acceptable adjuvant, diluent or carrier.
[0132] The pharmaceutical compositions may be administered topically (e.g. to the skin or
to the lung and/or airways) in the form, e.g., of creams, solutions, suspensions,
heptafluoroalkane (HFA) aerosols and dry powder formulations, for example, formulations
in the inhaler device known as the Turbuhaler
®; or systemically, e.g. by oral administration in the form of tablets, capsules, syrups,
powders or granules; or by parenteral administration in the form of a sterile solution,
suspension or emulsion for injection (including intravenous, subcutaneous, intramuscular,
intravascular or infusion); or by rectal administration in the form of suppositories.
[0133] Dry powder formulations and pressurized HFA aerosols of the compounds of the invention
(including pharmaceutically acceptable salts) may be administered by oral or nasal
inhalation. For inhalation, the compound is desirably finely divided. The finely divided
compound preferably has a mass median diameter of less than 10 micrometres (µm), and
may be suspended in a propellant mixture with the assistance of a dispersant, such
as a C
8-C
20 fatty acid or salt thereof, (for example, oleic acid), a bile salt, a phospholipid,
an alkyl saccharide, a perfluorinated or polyethoxylated surfactant, or other pharmaceutically
acceptable dispersant.
[0134] The compounds of the invention may also be administered by means of a dry powder
inhaler. The inhaler may be a single or a multi dose inhaler, and may be a breath
actuated dry powder inhaler.
[0135] One possibility is to mix the finely divided compound of the invention with a carrier
substance, for example, a mono-, di- or polysaccharide, a sugar alcohol, or another
polyol. Suitable carriers are sugars, for example, lactose, glucose, raffinose, melezitose,
lactitol, maltitol, trehalose, sucrose, mannitol; and starch. Alternatively the finely
divided compound may be coated by another substance. The powder mixture may also be
dispensed into hard gelatine capsules, each containing the desired dose of the active
compound.
[0136] Another possibility is to process the finely divided powder into spheres which break
up during the inhalation procedure. This spheronized powder may be filled into the
drug reservoir of a multidose inhaler, for example, that known as the Turbuhaler
® in which a dosing unit meters the desired dose which is then inhaled by the patient.
With this system the active ingredient, with or without a carrier substance, is delivered
to the patient.
[0137] For oral administration the compound of the invention may be admixed with an adjuvant
or a carrier, for example, lactose, saccharose, sorbitol, mannitol; a starch, for
example, potato starch, corn starch or amylopectin; a cellulose derivative; a binder,
for example, gelatine or polyvinylpyrrolidone; and/or a lubricant, for example, magnesium
stearate, calcium stearate, polyethylene glycol, a wax, paraffin, and the like, and
then compressed into tablets. If coated tablets are required, the cores, prepared
as described above, may be coated with a concentrated sugar solution which may contain,
for example, gum arabic, gelatine, talcum and titanium dioxide. Alternatively, the
tablet may be coated with a suitable polymer dissolved in a readily volatile organic
solvent.
[0138] For the preparation of soft gelatine capsules, the compound of the invention may
be admixed with, for example, a vegetable oil or polyethylene glycol. Hard gelatine
capsules may contain granules of the compound using either the above-mentioned excipients
for tablets. Also liquid or semisolid formulations of the compound of the invention
may be filled into hard gelatine capsules.
[0139] Liquid preparations for oral application may be in the form of syrups or suspensions,
for example, solutions containing the compound of the invention, the balance being
sugar and a mixture of ethanol, water, glycerol and propylene glycol. Optionally such
liquid preparations may contain colouring agents, flavouring agents, saccharine and/or
carboxymethylcellulose as a thickening agent or other excipients known to those skilled
in art.
[0140] The compounds of the invention (that is, compounds of formula (I) and pharmaceutically
acceptable salts thereof) may also be administered in conjunction with other compounds
used for the treatment of the above conditions.
[0141] The invention therefore further relates to combination therapies wherein a compound
of the invention or a pharmaceutical composition or formulation comprising a compound
of the invention is administered concurrently or sequentially or as a combined preparation
with another therapeutic agent or agents, for the treatment of one or more of the
conditions listed.
[0142] The anti-cancer treatment defined hereinbefore may be applied as a sole therapy or
may involve, in addition to the compound of the invention, conventional surgery or
radiotherapy or chemotherapy. Such chemotherapy may include one or more of the following
categories of anti-tumour agents:-
- (i) other antiproliferative/antineoplastic drugs and combinations thereof, as used
in medical oncology, such as alkylating agents (for example cis-platin, oxaliplatin,
carboplatin, cyclophosphamide, nitrogen mustard, melphalan, chlorambucil, busulphan,
temozolamide and nitrosoureas); antimetabolites (for example gemcitabine and antifolates
such as fluoropyrimidines like 5-fluorouracil and tegafur, raltitrexed, methotrexate,
cytosine arabinoside, and hydroxyurea); antitumour antibiotics (for example anthracyclines
like adriamycin, bleomycin, doxorubicin, daunomycin, epirubicin, idarubicin, mitomycin-C,
dactinomycin and mithramycin); antimitotic agents (for example vinca alkaloids like
vincristine, vinblastine, vindesine and vinorelbine and taxoids like taxol and taxotere
and polokinase inhibitors); and topoisomerase inhibitors (for example epipodophyllotoxins
like etoposide and teniposide, amsacrine, topotecan and camptothecin);
- (ii) cytostatic agents such as antioestrogens (for example tamoxifen, fulvestrant,
toremifene, raloxifene, droloxifene and iodoxyfene), antiandrogens (for example bicalutamide,
flutamide, nilutamide and cyproterone acetate), LHRH antagonists or LHRH agonists
(for example goserelin, leuprorelin and buserelin), progestogens (for example megestrol
acetate), aromatase inhibitors (for example as anastrozole, letrozole, vorazole and
exemestane) and inhibitors of 5α-reductase such as finasteride;
- (iii) anti-invasion agents (for example c-Src kinase family inhibitors like 4-(6-chloro-2,3-methylenedioxyanilino)-7-[2-(4-methylpiperazin-1-yl)ethoxy]-5-tetrahydropyran-4-yloxyquinazoline
(AZD0530; International Patent Application WO 01/94341) and N-(2-chloro-6-methylphenyl)-2-{6-[4-(2-hydroxyethyl)piperazin-1-yl]-2-methylpyrimidin-4-ylamino}thiazole-5-carboxamide
(dasatinib, BMS-354825; J. Med. Chem., 2004, 47, 6658-6661), and metalloproteinase inhibitors like marimastat, inhibitors of urokinase plasminogen
activator receptor function or antibodies to Heparanase);
- (iv) inhibitors of growth factor function: for example such inhibitors include growth
factor antibodies and growth factor receptor antibodies (for example the anti-erbB2
antibody trastuzumab [Herceptin™], the anti-EGFR antibody panitumumab, the anti-erbB
1 antibody cetuximab [Erbitux, C225] and any growth factor or growth factor receptor
antibodies disclosed by Stern et al. Critical reviews in oncology/haematology, 2005, Vol. 54, pp11-29); such inhibitors also include tyrosine kinase inhibitors, for example inhibitors
of the epidermal growth factor family (for example EGFR family tyrosine kinase inhibitors
such as N-(3-chloro-4-fluorophenyl)-7-methoxy-6-(3-morpholinopropoxy)quinazolin-4-amine
(gefitinib, ZD1839), N-(3-ethynylphenyl)-6,7-bis(2-methoxyethoxy)quinazolin-4-amine (erlotinib, OSI-774)
and 6-acrylamido-N-(3-chloro-4-fluorophenyl)-7-(3-morpholinopropoxy)-quinazolin-4-amine (CI 1033), erbB2
tyrosine kinase inhibitors such as lapatinib, inhibitors of the hepatocyte growth
factor family, inhibitors of the platelet-derived growth factor family such as imatinib,
inhibitors of serine/threonine kinases (for example Ras/Raf signalling inhibitors
such as farnesyl transferase inhibitors, for example sorafenib (BAY 43-9006)), inhibitors
of cell signalling through MEK and/or AKT kinases, inhibitors of the hepatocyte growth
factor family, c-kit inhibitors, abl kinase inhibitors, IGF receptor (insulin-like
growth factor) kinase inhibitors; aurora kinase inhibitors (for example AZD1152, PH739358,
VX-680, MLN8054, R763, MP235, MP529, VX-528 AND AX39459) and cyclin dependent kinase
inhibitors such as CDK2 and/or CDK4 inhibitors;
- (v) antiangiogenic agents such as those which inhibit the effects of vascular endothelial
growth factor, [for example the anti-vascular endothelial cell growth factor antibody
bevacizumab (Avastin™) and VEGF receptor tyrosine kinase inhibitors such as 4-(4-bromo-2-fluoroanilino)-6-methoxy-7-(1-methylpiperidin-4-ylmethoxy)quinazoline
(ZD6474; Example 2 within WO 01/32651), 4-(4-fluoro-2-methylindol-5-yloxy)-6-methoxy-7-(3-pyrrolidin-1-ylpropoxy)quinazoline
(AZD2171; Example 240 within WO 00/47212), vatalanib (PTK787; WO 98/35985) and SU1 1248 (sunitinib; WO 01/60814), compounds such as those disclosed in International Patent Applications WO97/22596, WO 97/30035, WO 97/32856 and WO 98/13354 and compounds that work by other mechanisms (for example linomide, inhibitors of
integrin ανβ3 function and angiostatin)];
- (vi) vascular damaging agents such as Combretastatin A4 and compounds disclosed in
International Patent Applications WO 99/02166, WO 00/40529, WO 00/41669, WO 01/92224, WO 02/04434 and WO 02/08213;
- (vii)antisense therapies, for example those which are directed to the targets listed
above, such as ISIS 2503, an anti-ras antisense;
- (viii) gene therapy approaches, including for example approaches to replace aberrant
genes such as aberrant p53 or aberrant BRCA1 or BRCA2, GDEPT (gene-directed enzyme
pro-drug therapy) approaches such as those using cytosine deaminase, thymidine kinase
or a bacterial nitroreductase enzyme and approaches to increase patient tolerance
to chemotherapy or radiotherapy such as multi-drug resistance gene therapy; and
- (ix) immunotherapy approaches, including for example ex-vivo and in-vivo approaches
to increase the immunogenicity of patient tumour cells, such as transfection with
cytokines such as interleukin 2, interleukin 4 or granulocyte-macrophage colony stimulating
factor, approaches to decrease T-cell anergy, approaches using transfected immune
cells such as cytokine-transfected dendritic cells, approaches using cytokine-transfected
tumour cell lines and approaches using anti-idiotypic antibodies.
[0143] Furthermore, for the treatment of the inflammatory diseases COPD, asthma and allergic
rhinitis the compounds of the invention may be combined with agents such as tumour
necrosis factor alpha (TNF-alpha) inhibitors such as anti-TNF monoclonal antibodies
(for example Remicade, CDP-870 and adalimumab) and TNF receptor immunoglobulin molecules
(such as Enbrel); non-selective cyclo-oxygenase COX-1/COX-2 inhibitors whether applied
topically or systemically (such as piroxicam, diclofenac, propionic acids such as
naproxen, flubiprofen, fenoprofen, ketoprofen and ibuprofen, fenamates such as mefenamic
acid, indomethacin, sulindac, azapropazone, pyrazolones such as phenylbutazone, salicylates
such as aspirin), COX-2 inhibitors (such as meloxicam, celecoxib, rofecoxib, valdecoxib,
lumarocoxib, parecoxib and etoricoxib); glucocorticosteroids (whether administered
by topical,oral, intramuscular, intravenous, or intra-articular routes); methotrexate,
lefunomide; hydroxychloroquine, d-penicillamine, auranofin or other parenteral or
oral gold preparations.
[0144] The present invention still further relates to the combination of a compound of the
invention and a leukotriene biosynthesis inhibitor, 5-lipoxygenase (5-LO) inhibitor
or 5-lipoxygenase activating protein (FLAP) antagonist such as; zileuton; ABT-761;
fenleuton; tepoxalin; Abbott-79175; Abbott-85761; a N-(5-substituted)-thiophene-2-alkylsulfonamide;
2,6-di-tert-butylphenolhydrazones; a methoxytetrahydropyrans such as Zeneca ZD-2138;
the compound SB-210661; a pyridinyl-substituted 2-cyanonaphthalene compound such as
L-739,010; a 2-cyanoquinoline compound such as L-746,530; or an indole or quinoline
compound such as MK-591, MK-886, and BAY x 1005.
[0145] The present invention further relates to the combination of a compound of the invention
and a receptor antagonist for leukotrienes (LTB4, LTC4, LTD4, and LTE4) selected from
the group consisting of the phenothiazin-3-1s such as L-651,392; amidino compounds
such as CGS-25019c; benzoxalamines such as ontazolast; benzenecarboximidamides such
as BIIL 284/260; and compounds such as zafirlukast, ablukast, montelukast, pranlukast,
verlukast (MK-679), RG-12525, Ro-245913, iralukast (CGP 45715A), and BAY x 7195.
[0146] The present invention still further relates to the combination of a compound of the
invention and a phosphodiesterase (PDE) inhibitor such as a methylxanthanine including
theophylline and aminophylline; a selective PDE isoenzyme inhibitor including a PDE4
inhibitor an inhibitor of the isoform PDE4D, or an inhibitor of PDE5.
[0147] The present invention further relates to the combination of a compound of the invention
and a histamine type 1 receptor antagonist such as cetirizine, loratadine, desloratadine,
fexofenadine, acrivastine, terfenadine, astemizole, azelastine, levocabastine, chlorpheniramine,
promethazine, cyclizine, or mizolastine; applied orally, topically or parenterally.
[0148] The present invention still further relates to the combination of a compound of the
invention and a gastroprotective histamine type 2 receptor antagonist.
[0149] The present invention further relates to the combination of a compound of the invention
and an antagonist of the histamine type 4 receptor.
[0150] The present invention still further relates to the combination of a compound of the
invention and an alpha-1/alpha-2 adrenoceptor agonist vasoconstrictor sympathomimetic
agent, such as propylhexedrine, phenylephrine, phenylpropanolamine, ephedrine, pseudoephedrine,
naphazoline hydrochloride, oxymetazoline hydrochloride, tetrahydrozoline hydrochloride,
xylometazoline hydrochloride, tramazoline hydrochloride or ethylnorepinephrine hydrochloride.
[0151] The present invention further relates to the combination of a compound of the invention
and an anticholinergic agent including muscarinic receptor (M1, M2, and M3) antagonists
such as atropine, hyoscine, glycopyrrrolate, ipratropium bromide, tiotropium bromide,
oxitropium bromide, pirenzepine or telenzepine.
[0152] The present invention still further relates to the combination of a compound of the
invention together with a beta-adrenoceptor agonist (including beta receptor subtypes
1-4) such as isoprenaline, salbutamol, formoterol, salmeterol, terbutaline, orciprenaline,
bitolterol mesylate, and pirbuterol.
[0153] The present invention further relates to the combination of a compound of the invention
and a chromone, such as sodium cromoglycate or nedocromil sodium.
[0154] The present invention still further relates to the combination of a compound of the
invention together with an insulin-like growth factor type I (IGF-1) mimetic.
[0155] The present invention still further relates to the combination of a compound of the
invention and a glucocorticoid, such as flunisolide, triamcinolone acetonide, beclomethasone
dipropionate, budesonide, fluticasone propionate, ciclesonide or mometasone furoate.
[0156] The present invention still further relates to the combination of a compound of the
invention together with an inhibitor of matrix metalloproteases (MMPs), i.e., the
stromelysins, the collagenases, and the gelatinases, as well as aggrecanase; especially
collagenase-1 (MMP-1), collagenase-2 (MMP-8), collagenase-3 (MMP-13), stromelysin-1
(MMP-3), stromelysin-2 (MMP-10), and stromelysin-3 (MMP-11) and MMP-9 and MMP-12.
[0157] The present invention still further relates to the combination of a compound of the
invention together with modulators of chemokine receptor function such as antagonists
of CCR1, CCR2, CCR2A, CCR2B, CCR3, CCR4, CCR5, CCR6, CCR7, CCR8, CCR9, CCR10 and CCR11
(for the C-C family); CXCR1, CXCR2, CXCR3, CXCR4 and CXCR5 (for the C-X-C family)
and CX3CR1 for the C-X3-C family.
[0158] The present invention still further relates to the combination of a compound of the
invention together with a cytokine or modulator of cytokine function, including alpha-,
beta-, and gamma-interferon; interleukins (IL) including IL1 to 15, and interleukin
antagonists or inhibitors, including agents which act on cytokine signalling pathways.
[0159] The present invention still further relates to the combination of a compound of the
invention together with an immunoglobulin (Ig) or Ig preparation or an antagonist
or antibody modulating Ig function such as anti-IgE (omalizumab).
[0160] The present invention further relates to the combination of a compound of the invention
and another systemic or topically-applied anti-inflammatory agent, such as thalidomide
or a derivative thereof, a retinoid, dithranol or calcipotriol.
[0161] The present invention further relates to the combination of a compound of the invention
together with an antibacterial agent such as a penicillin derivative, a tetracycline,
a macrolide, a beta-lactam, a fluoroquinolone, metronidazole, an inhaled aminoglycoside;
an antiviral agent including acyclovir, famciclovir, valaciclovir, ganciclovir, cidofovir,
amantadine, rimantadine, ribavirin, zanamavir and oseltamavir; a protease inhibitor
such as indinavir, nelfinavir, ritonavir, and saquinavir; a nucleoside reverse transcriptase
inhibitor such as didanosine, lamivudine, stavudine, zalcitabine or zidovudine; or
a non-nucleoside reverse transcriptase inhibitor such as nevirapine or efavirenz.
[0162] In a further aspect the present invention provides a combination (for example for
the treatment of COPD, asthma or allergic rhinitis) of a compound of formula (I) or
a pharmaceutically acceptable salt thereof as hereinbefore defined and one or more
agents independently selected from:
- a non-steroidal glucocorticoid receptor (GR-receptor) agonist;
- a selective β2 adrenoceptor agonist (such as metaproterenol, isoproterenol, isoprenaline, albuterol,
salbutamol, formoterol, salmeterol, terbutaline, orciprenaline, bitolterol mesylate,
pirbuterol or indacaterol);
- a phosphodiesterase inhibitor (such as a PDE4 inhibitor);
- a protease inhibitor (such as a neutrophil elastase or matrix metalloprotease MMP-12
inhibitor);
- a glucocorticoid;
- an anticholinergic agent;
- a modulator of chemokine receptor function (such as a CCR1 receptor antagonist); and
- an inhibitor of kinase function (such as the kinases p38 or IKK).
[0163] The invention also provides a pharmaceutical product comprising, in combination,
a preparation of a first active ingredient which is a compound of formula (I) or a
pharmaceutically acceptable salt thereof as hereinbefore defined, and a preparation
of a second active ingredient which is
• a non-steroidal glucocorticoid receptor (GR-receptor) agonist;
• a selective β2 adrenoceptor agonist;
• a phosphodiesterase inhibitor;
• a protease inhibitor;
• a glucocorticoid;
• an anticholinergic agent;
• a modulator of chemokine receptor function; or
• an inhibitor of kinase function;
for simultaneous, sequential or separate use in therapy.
[0164] In another aspect, the invention provides a kit comprising a preparation of a first
active ingredient which is a compound of formula (I) or a pharmaceutically acceptable
salt thereof as hereinbefore defined, and a preparation of a second active ingredient
which is
• a non-steroidal glucocorticoid receptor (GR-receptor) agonist;
• a selective β2 adrenoceptor agonist;
• a phosphodiesterase inhibitor;
• a protease inhibitor;
• a glucocorticoid;
• an anticholinergic agent;
• a modulator of chemokine receptor function; or
• an inhibitor of kinase function;
and instructions for the simultaneous, sequential or separate administration of the
preparations to a patient in need thereof.
[0165] The present invention will be further explained by reference to the following illustrative
examples.
[0166] Unless otherwise stated reactions were run under nitrogen and organic solutions were
dried over magnesium sulphate. RPHPLC means reversed phase preparative HPLC using
Waters Symmetry C8, Xterra, XBridge or Phenomenex Gemini columns using acetonitrile
and either aqueous ammonium acetate, ammonia, formic acid or trifluoroacetic acid
as buffer where appropriate. Column chromatography was carried out on silica gel.
Treating with SCX means the mixture was absorbed on SCX and eluted with an appropriate
solvent such as methanol or acetonitrile then the free base product eluted with aqueous
ammonia/methanol.
[0167] The following abbreviations are used in the Examples:
| EtOAc |
ethyl acetate |
| DCM |
dichloromethane |
| NMP |
N-methylpyrrolidinone |
| NBS |
N-bromosuccinimide |
| DMF |
N,N-dimethylformamide |
| DMSO |
dimethylsulfoxide |
| THF |
tetrahydrofuran |
| MeOH |
methanol |
| EtOH |
ethanol |
| TFA |
trifluoroacetic acid |
| HCl |
hydrogen chloride |
| K2CO3 |
potassium carbonate |
| NaHCO3 |
sodium hydrogen carbonate |
| TEA |
triethylamine |
| MeCN |
acetonitrile |
| Pd/C |
palladium on carbon |
| T3P |
1-propanephosphonic acid cyclic anhydride |
| DMAP |
4-dimethylaminopyridine |
| PS-TBD |
polystyrene bound 1,5,7-triazabicyclo[4.4.0]dec-5-ene |
| MTBE |
tert-butyl methyl ether |
| DIBAL-H |
diisobutylaluminium hydride |
| Pd-118 |
1,1'-Bis(di-tert-butylphosphino)ferrocenepalladium(II) chloride |
| KOH |
potassium hydroxide |
| sat. |
saturated |
| aq. |
aqueous |
| Et2O |
diethylether |
| DMA |
N,N-dimethylacetamide |
| TMS-Cl |
trimethylsilylchloride |
| conc. |
concentrated |
| rt |
room temperature |
| h |
hours |
| min |
minutes |
| M |
molar |
| MS |
mass spectrometry |
| PyBop |
Benzotriazol-1-yloxytripyrrolidinophosphonium hexafluorophosphate |
| HATU |
O-(7-azabezotriazol-1-yl)-N,N,N',N'-tetramethyluronium hexafluorophosphate |
| APCI |
atmospheric chemical ionisation method |
| ESI |
electron spray ionisation method |
| NMR |
nuclear magnetic resonance |
Instrument Details:
[0168]
o XRPD - PANalytical CubiX PRO machine in Ø - Ø configuration over the scan range
2° to 40° 20 with 100-second exposure per 0.02° increment. The X-rays were generated
by a copper long-fine focus tube operated at 45kV and 40mA. The wavelength of the
copper X-rays was 1.5418 Å. Data was collected on zero background holders on which
∼ 2mg of the compound was placed. The holder was made from a single crystal of silicon,
which had been cut along a non-diffracting plane and then polished on an optically
flat finish. The X-rays incident upon this surface were negated by Bragg extinction.
Example 1
Methyl 2-(3-((3-(2-Amino-4-methyl-6-(pentylamino)pyrimidin-5 yl)propylamino)methyl)phenyl)acetate
[0169]
- (i) 6-Methyl-N4-pentylpyrimidine-2,4-diamine
2-Amino-4-chloro-6-methylpyrimidine (10g) and pentylamine (20ml) were combined in
dioxane (100mL) and refluxed for 42h. The solvents were evaporated, the product taken
up in DCM, washed with water, sat. sodium bicarbonate solution, brine, dried, and
the solvent evaporated to give the subtitle compound 8.3g.
LC-MS m/z 195 ESI
- (ii) 5-Iodo-6-methyl-N4-pentylpyrimidine-2,4-diamine
A solution of iodine (11.92g) in DCM (300mL) was added to a stirred mixture of the
product from step (i) (8.3g) and sodium hydroxide (3.42g) in water (200mL). The reaction
mixture was stirred at rt overnight. The organic layer was separated and washed with
sodium metabisulfate solution, then brine. The combined organic layers were dried,
and the solvent evaporated under reduced pressure. The product was purified by chromatography
eluting with DCM:MeOH; 95:5 to give the subtitle compound 11g.
LC-MS m/z 321 ESI
- (iii) tert-Butyl 3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)prop-2-ynylcarbamate
tert-Butyl prop-2-ynylcarbamate (7.27g) was dissolved in THF (50mL), briefly purged
with nitrogen then copper(I) iodide (0.298g) was added. The reaction mixture was stirred
for 30min then the product from step (ii) (5g), tetrakis(triphenylphosphine)palladium(0)
(0.903g) and TEA (10mL) were added. The reaction mixture was heated at 70°C for 20h
then cooled to rt. The organic layer was washed with water and brine and the solvent
evaporated under reduced pressure. The residue was taken up in MeOH and purified via
SCX resin. The product was further purified by chromatography eluting with DCM:MeOH
95:5 to give the subtitle compound 3.7g. LC-MS m/z 348 ESI
- (iv) tert-Butyl 3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propylcarbamate
The product from step (iii) (3.7g) was dissolved in EtOH (100mL) then 5% Pd/C (300mg)
was added. The reaction mixture was hydrogenated at 3bar for 16h. The catalyst was
removed by filtation and the solvent evaporated to give the subtitle compound 3.8g.
LC-MS m/z 352 ESI
- (v) 5-(3-Aminopropyl)-6-methyl-N4-pentylpyrimidine-2,4-diamine
The product from step (iv) (3.8g) was dissolved in DCM (100mL) and TFA (35 mL) and
the reaction mixture stirred at rt for 16h. The solvent was evaporated and the residue
taken up in MeOH. The product was purified via SCX resin to give the subtitle compound
2.3g.
1H NMR (DMSO-d6): δ 6.79 - 6.71 (m, 1H), 5.51 - 5.44 (m, 2H), 3.27 - 3.19 (m, 4H), 2.38 - 2.28 (m,
2H), 2.04 (s, 3H), 1.57 - 1.36 (m, 4H), 1.33 - 1.18 (m, 4H), 0.87 (t, 3H)
LC-MS m/z 252 ESI
- (vi) Methyl 2-(3-((3-(2-Amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propylamino)methyl)
phenyl)acetate
The product from step (v) (1g) was dissolved in THF (30mL) then acetic acid (0.239g,
0.23m) and methyl 2-(3-formylphenyl)acetate (0.709g) were added followed by MeOH (0.5mL).
The reaction mixture was stirred at rt for 72h then sodium borohydride (0.1506g) was
added. After 2h a further portion of sodium borohydride (0.0452g) was added and the
reaction mixture stirred for 16h. A further portion of sodium borohydride (0.1506g)
was added and stirred for 2h. The reaction mixture was poured into saturated sodium
bicarbonate solution and extracted with EtOAc. The solvents were evaporated and the
product was purified by chromatography eluting with DCM:MeOH 97:3 to 80:20 to give
the title compound 0.5g.
1H NMR (DMSO-d6): δ 7.31 - 7.18 (m, 3H), 7.12 (d, 1H), 6.54 (t, 1H), 5.48 (d, 2H), 3.65 (d, 4H),
3.60 (s, 3H), 3.27 - 3.17 (m, 2H), 2.49 - 2.44 (m, 2H), 2.35 (t, 2H), 2.05 (s, 3H),
1.55 - 1.39 (m, 4H), 1.29 - 1.16 (m, 4H), 0.84 (t, 3H)
LC-MS m/z 414 ESI
Example 2
Methyl 2-(4-((3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propylamino)methyl)phenyl)acetate
[0170]

[0171] The product from Example 1 step (v) (0.3g) and methyl 2-(4-formylphenyl)acetate (0.213g)
were combined in THF (20mL), acetic acid (0.072g) was added and the reaction mixture
stirred at rt for 16h. Sodium borohydride (0.0677g) and MeOH (3 drops) were added
and the reaction mixture stirred for 72h. The solvents were evaporated and the product
dissolved in MeOH and purified by RPHPLC to give the title compound 0.3g.
1H NMR (DMSO-
d6): δ 7.28 (d, 2H), 7.19 (d, 2H), 6.58 - 6.54 (m, 1H), 5.50 - 5.45 (m, 2H), 3.64 (s,
3H), 3.61 (d, 2H), 3.29 (s, 4H), 3.25 - 3.18 (m, 2H), 2.47 - 2.40 (m, 2H), 2.38 -
2.30 (m, 2H), 2.05 (s, 3H), 1.54 - 1.39 (m, 4H), 1.28 - 1.18 (m, 3H), 0.85 (t, 3H)
LC-MS m/z 414 ESI
Example 3
Methyl 2-(3-((N-(3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propyl)-2-(dimethylamino)acetamido)methyl)phenyl)acetate
[0172]

(i) Methyl 2-(3-((N-(3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propyl)-2-chloroacetamido)methyl)phenyl)acetate
[0173] The product from Example 1 (0.1g) was dissolved in MeCN (10mL) and chloroacetyl chloride
(0.027g) was added. The reaction mixture was stirred for 16h and the solvents evaporated
to give the subtitle compound which was used without further purification.
LC-MS m/z 490 ESI
(ii) Methyl 2-(3-((N-(3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propyl)-2-(dimethylamino)acetamido)methyl)phenyl)acetate
[0174] The product from step (i) (0.1g) was dissolved in MeOH and dimethylamine (2M in MeOH,
0.61ml) was added. The reaction mixture was stirred for 72h at rt, the solvents were
evaporated and the residue purified by RPHPLC to give the title compound 24mg.
1H NMR (DMSO-
d6): δ 7.35 - 7.21 (m, 1H), 7.21 - 7.03 (m, 3H), 6.21 - 6.09 (m, 1H), 5.54 - 5.47 (m,
2H), 4.46 (s, 1H), 3.67 (s, 1H), 3.63 (s, 5H), 3.59 (s, 4H), 3.30 - 3.21 (m, 2H),
3.05 - 3.02 (m, 2H), 2.30 - 2.19 (m, 2H), 2.16 (d, 6H), 2.02 (s, 2H), 1.98 (s, 1H),
1.66 - 1.54 (m, 1H), 1.54 - 1.42 (m, 3H), 1.34 - 1.19 (m, 2H), 0.86 (t, 3H)
LC-MS m/z 499 ESI
Example 4
Methyl 2-(4-((N-(3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propyl)-2-(dimethylamino)acetamido)methyl)phenyl)acetate
[0175]

[0176] The title compound was prepared by the method of Example 3 using the product from
Example 2 and the appropriate amine.
1H NMR (DMSO-
d6): δ 7.22 (dd, 2H), 7.17 - 7.11 (m, 2H), 6.20 - 6.11 (m, 1H), 5.53 - 5.47 (m, 2H),
4.45 (s, 2H), 3.65 (d, 2H), 3.60 (s, 3H), 3.27 - 3.20 (m, 2H), 3.04 (s, 2H), 2.30
- 2.20 (m, 2H), 2.19 - 2.13 (m, 7H), 2.02 (s, 2H), 1.99 (s, 1H), 1.64 - 1.54 (m, 1H),
1.53 - 1.42 (m, 3H), 1.33 - 1.19 (m, 5H), 0.86 (t, 3H).
LC-MS m/z 499 ESI
Examples 5 - 10 were prepared using the method of Example 3 and the appropriate amine.
Example 5
(S)-Methyl 1-(2-((3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propyl)(3-(2-methoxy-2-oxoethyl)benzyl)amino)-2-oxoethyl)pyrrolidine-2-carboxylate
[0177]
1H NMR DMSO-
d6 @90°C; δ 7.33 - 7.19 (m, 1H), 7.19 - 7.03 (m, 3H), 5.80 - 5.70 (m, 1H), 5.21 - 5.12
(m, 2H), 3.68 - 3.51 (m, 6H), 3.45 - 3.21 (m, 5H), 2.98 - 2.92 (m, 6H), 2.33 - 2.22
(m, 2H), 2.00 (s, 4H), 1.84 - 1.71 (m, 3H), 1.59 - 1.45 (m, 4H), 1.34 - 1.22 (m, 6H),
0.86 (t, 3H)
LC-MS m/z 583 ESI
Example 6
Methyl 2-(3-((N-(3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propyl)-2-(4-methylpiperazin-1-yl)acetamido)methyl)phenyl)acetate
[0178]
1H NMR DMSO-
d6 @90°C; δ 7.34 - 7.19 (m, 1H), 7.19 - 7.03 (m, 3H), 5.84 - 5.75 (m, 1H), 5.20 - 5.11
(m, 2H), 3.61 (s, 4H), 3.36 - 3.23 (m, 4H), 3.08 (s, 2H), 2.98 - 2.93 (m, 2H), 2.47
- 2.17 (m, 10H), 2.13 (s, 3H), 2.02 (s, 3H), 1.60 - 1.47 (m, 4H), 1.34 - 1.23 (m,
5H), 0.86 (t, 3H)
LC-MS m/z 554 ESI
Example 7
Methyl 2-(3-((N-(3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propyl)-2-(4-hydroxypiperidin-1-yl)acetamido)methyl)phenyl)acetate
[0179]
1H NMR DMSO-
d6: δ 7.30 - 7.04 (m, 4H), 5.81 - 5.75 (m, 1H), 5.17 (s, 2H), 4.14 (s, 1H), 3.64 - 3.58
(m, 5H), 3.50 - 3.37 (m, 1H), 3.37 - 3.22 (m, 4H), 3.07 (s, 2H), 2.98 - 2.95 (m, 2H),
2.69 - 2.62 (m, 2H), 2.33 - 2.24 (m, 2H), 2.18 - 2.08 (m, 2H), 2.01 (s, 3H), 1.72
- 1.45 (m, 6H), 1.43 - 1.21 (m, 6H), 0.86 (t, 3H)
LC-MS m/z 555 ESI
Example 8
Methyl 2-(3-((2-(4-acetyl-1,4-diazepan-1-yl)-N-(3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propyl)acetamido)methyl)phenyl)acetate
[0180]
1H NMR DMSO-
d6: δ 7.40 - 7.02 (m, 4H), 6.23 - 6.13 (m, 1H), 5.57 - 5.46 (m, 2H), 4.68 - 4.44 (m,
2H), 3.71 - 3.62 (m, 4H), 3.60 (s, 4H), 3.48 - 3.36 (m, 4H), 3.30 - 3.23 (m, 5H),
2.68 (s, 3H), 2.33 (s, 3H), 2.31 - 2.19 (m, 2H), 2.04 - 1.92 (m, 4H), 1.52 - 1.42
(m, 2H), 1.32 - 1.19 (m, 6H), 0.89 - 0.82 (m, 3H)
LC-MS m/z 596 ESI
Example 9
Methyl 2-(3-((N-(3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propyl)-2-(4-(3-(dimethylamino)propyl)piperazin-1-yl)acetamido)methyl)phenyl)acetate
[0181]
1H NMR DMSO-
d6: δ 7.37 - 6.98 (m, 4H), 6.23 - 6.08 (m, 1H), 5.57 - 5.44 (m, 2H), 4.66 (s, 1H), 4.47
(s, 1H), 3.70 - 3.56 (m, 5H), 3.42 - 3.34 (m, 2H), 3.29 - 3.21 (m, 4H), 3.11 - 2.99
(m, 2H), 2.40 - 2.14 (m, 12H), 2.10 (s, 5H), 2.09 - 1.97 (m, 3H), 1.69 - 1.38 (m,
6H), 1.34 - 1.18 (m, 5H), 0.93 - 0.77 (m, 3H)
LC-MS m/z 625 ESI
Example 10
Methyl 2-(3-((N-(3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propyl)-2-((2-hydroxyethyl)(methyl)amino)acetamido)methyl)phenyl)acetate
[0182]
1H NMR DMSO-
d6: δ 7.37 - 6.99 (m, 4H), 6.22 - 6.09 (m, 1H), 5.59 - 5.44 (m, 2H), 4.69 (s, 1H), 4.56
- 4.32 (m, 3H), 3.69 - 3.56 (m, 5H), 3.27 - 3.21 (m, 4H), 3.20 - 3.14 (m, 2H), 2.29
- 2.18 (m, 5H), 2.01 (d, 4H), 1.64 - 1.42 (m, 5H), 1.34 - 1.14 (m, 5H), 0.86 (t, 3H)
LC-MS m/z 529 ESI
Example 11
Methyl 4-((3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propyl)(3-(2-methoxy-2-oxoethyl)benzyl)amino)-4-oxobutanoate
[0183]

[0184] The product from Example 1 (61mg), mono-methyl succinate (23.4mg) and TEA (0.062
ml) were dissolved in DCM (15ml) then HATU (61.7mg) was added. The resulting solution
was stirred at rt for 16h. The solvents were evaporated, the residue was taken up
in MeOH and the crude product was purified by RPHPLC to afford the title compound
as a colorless gum 32mg.
1H NMR DMSO-
d6: δ 7.36 - 7.02 (m, 4H), 6.24 - 6.09 (m, 1H), 5.55 - 5.46 (m, 2H), 4.63 - 4.42 (m,
2H), 3.71 - 3.51 (m, 8H), 3.29 - 3.19 (m, 4H), 2.71 - 2.62 (m, 2H), 2.32 - 2.17 (m,
2H), 2.00 (s, 3H), 1.60 - 1.42 (m, 4H), 1.34 - 1.18 (m, 5H), 0.89 - 0.80 (m, 4H)
LC-MS m/z 528 ESI
Example 12
Methyl 2-(3-((N-(3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propyl)-4-(dimethylamino)butanamido)methyl)phenyl)acetate
[0185]

[0186] To a stirred DCM (15mL) solution of the product from Example 1 (58mg), 4-(dimethylamino)butyric
acid hydrochloride (28.2mg) and TEA (0.059mL) was added HATU (58.7mg) under nitrogen.
The resulting solution was stirred at rt for 16h. The solvent was evaporated and the
residue was taken up in MeOH and the crude product purified by RPHPLC to afford the
title compound 5mg.
1H NMR DMSO-
d6: δ7.37 - 7.21 (m, 1H), 7.19 - 7.10 (m, 1H), 7.08 - 7.03 (m, 2H), 6.22 - 6.11 (m,
1H), 5.54 - 5.46 (m, 2H), 4.59 - 4.44 (m, 2H), 3.70 - 3.61 (m, 2H), 3.60 (s, 3H),
3.29 - 3.20 (m, 2H), 2.39 - 2.30 (m, 2H), 2.30 - 2.14 (m, 4H), 2.09 (s, 4H), 2.04
(s, 2H), 1.99 (s, 3H), 1.72 - 1.57 (m, 2H), 1.57 - 1.42 (m, 4H), 1.33 - 1.18 (m, 6H),
0.86 (t, 3H)
LC-MS m/z 527 ESI
Example 13
Methyl 2-(3-((N-(3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propyl)methylsulfonamido)methyl)phenyl)acetate
[0187]

[0188] To a stirred solution of the product from Example 1 (70mg) dissolved in DCM was added
methanesulfonyl chloride (16µl) and TEA (28.3µl) under nitrogen. The resulting solution
was stirred at rt for 16h. The solvents were evaporated, the residue redissolved in
MeOH and the crude product was purified by RPHPLC to afford the title compound 32mg.
1H NMR DMSO-
d6: δ 7.33 - 7.27 (m, 1H), 7.23 - 7.15 (m, 3H), 6.14 - 6.07 (m, 1H), 5.52 - 5.47 (m,
2H), 4.30 (s, 2H), 3.67 (s, 2H), 3.58 (s, 2H), 3.28 - 3.20 (m, 2H), 3.19 - 3.12 (m,
2H), 2.94 (s, 3H), 2.20 - 2.13 (m, 2H), 1.92 (s, 3H), 1.51 - 1.40 (m, 4H), 1.32 -
1.19 (m, 5H), 0.86 (t, 3H)
LC-MS m/z 492 ESI
Example 14
Methyl 2-(3-((N-(3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propyl)-1-methyl-1H-imidazole-4-sulfonamido)methyl)phenyl)acetate
[0189]

[0190] To a stirred solution of the product from Example 1 (80mg) dissolved in DCM (5mL)
was added 1-methylimidazole-4-sulfonyl chloride (38.4mg) and TEA (0.032mL) under nitrogen.
The resulting solution was stirred at rt for 16h, the solvents were evaporated and
the residue redissolved in MeOH and the crude product purified by RPHPLC to afford
the title compound 69mg.
1H NMR DMSO-
d6: δ 7.83 - 7.81 (m, 1H), 7.78 - 7.76 (m, 1H), 7.33 - 7.10 (m, 4H), 6.07 - 6.02 (m,
1H), 5.48 (s, 2H), 4.28 (s, 2H), 3.71 (s, 3H), 3.64 (s, 2H), 3.58 (s, 3H), 3.25 -
3.11 (m, 4H), 2.14 - 2.07 (m, 2H), 1.85 (s, 3H), 1.49 - 1.39 (m, 2H), 1.40 - 1.17
(m, 6H), 0.85 (t, 3H)
LC-MS m/z 558 ES+
Example 15
Methyl 2-(4-((N-(3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propyl)-2-((2-methoxyethyl)(methyl)amino)acetamido)methyl)phenyl)acetate
[0191]

[0192] The title compound was prepared by the method of Example 3 using the product from
Example 2 and N-(2-methoxyethyl)methylamine.
1H NMR DMSO-
d6: δ 7.27 - 7.10 (m, 4H), 6.18 - 6.10 (m, 1H), 5.54 - 5.46 (m, 2H), 4.67 (s, 1H), 4.45
(s, 1H), 3.67 - 3.61 (m, 2H), 3.59 (s, 3H), 3.41 (t, 1H), 3.29 - 3.20 (m, 8H), 3.16
(s, 1H), 3.12 (s, 1H), 2.59 - 2.53 (m, 1H), 2.30 - 2.17 (m, 5H), 2.01 (d, 3H), 1.62
- 1.41 (m, 4H), 1.33 - 1.18 (m, 5H), 0.86 (t, 3H)
LC-MS m/z 543 ESI
Example 16
Methyl 2-(3-((N-(3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propyl)-3-(dimethylamino)propanamido)methyl)phenyl)acetate
[0193]

[0194] The product from Example 1 (80mg) and 3-(dimethylamino)propanoic acid hydrochloride
(45mg) were combined in DCM (5mL) then TEA (73mg) and HATU (101mg) were added. The
reaction mixture was stirred at rt for 16h. The solvents were evaporated, the residue
dissolved in MeOH and purified by RPHPLC to give the title compound 32mg.
1H NMR DMSO-
d6: δ 7.37 - 7.02 (m, 4H), 6.24 - 6.11 (m, 1H), 5.55 - 5.45 (m, 2H), 4.62 - 4.39 (m,
2H), 3.69 - 3.62 (m, 2H), 3.59 (s, 4H), 3.27 - 3.18 (m, 4H), 2.47 - 2.34 (m, 2H),
2.30 - 2.20 (m, 2H), 2.13 (s, 3H), 2.08 - 1.95 (m, 6H), 1.57 - 1.44 (m, 4H), 1.32
- 1.19 (m, 5H), 0.86 (t, 3H)
LC-MS m/z 513 ESI
Example 17
Methyl 2-(3-((4-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)butylamino)methyl)phenyl)acetate
[0195]
- (i) Benzyl 4-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)but-3-ynylcarbamate
Benzyl but-3-ynylcarbamate (0.666g) was dissolved in THF (20 mL), briefly purged with
nitrogen and copper(I) iodide (0.042g) was added. The reaction mixture was stirred
for 30min, the product from example 1 step (ii) (0.7g), tetrakis(triphenylphosphine)
palladium(0) (0.126g) and TEA (5mL) were added. The reaction mixture was heated to
70°C for 16h. The reaction mixture was cooled to rt and the organic layer washed with
water and brine. The organic layer was evaporated under reduced pressure, MeOH added
and the solid filtered off. The filtrate was purified via SCX resin then further purified
by chromatography oeluting with DCM:MeOH (95:5) to give the subtitle compound 0.4g.
LC-MS m/z 396 ESI
- (ii) 5-(4-Aminobutyl)-6-methyl-N4-pentylpyrimidine-2,4-diamine
The product from step (i) (0.2 g) was dissolved in EtOH (20mL) then 5% Pd/C (100mg)
in EtOH (5mL) was added. The reaction mixture was hydrogenated at 4 bar overnight.
The catalyst was filtered off then 20% Pd(OH)2/C (100 mg) in EtOH (5ml) was added and the reaction mixture hydrogenated at 4bar
for 3h. The catalyst was filtered off and the solvents evaporated to give the subtitle
compound 0.06g.
LC-MS m/z 266 ESI
- (iii) Methyl 2-(3-((4-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)butylamino)methyl)phenyl)acetate
To the product of step (ii) (0.06g), methyl 2-(3-formylphenyl)acetate (0.0403g) and
acetic acid (0.0136g) in THF (10mL) was added sodium triacetoxyborohydride (0.1102g).
The reaction mixture was stirred for 72h, the solvents were evaporated and the residue
dissolved in MeOH, acidified and purified via SCX resin, then RPHPLC to give the title
compound 6mg.
LC-MS m/z 428 ESI
Example 18
(S)-Methyl 2-(4-((3-(2-amino-4-(1-hydroxyheptan-3-ylamino)-6-methylpyrimidin-5-yl)propylamino)methyl)phenyl)acetate
[0196]
- (i) (E)-tert-Butyl hept-2-enoate
To a solution of valeraldehyde (5.81g) in THF (100mL) was added tert-butoxycarbonylmethylenetriphenylphosphorane
(25.4g) and the reaction mixture stirred for 16h at rt. The solvents were evaporated,
the residue slurried in diethyl ether and filtered. The filtrate was evaporated and
the residue purified by chromatography eluting with 3% EtOAc in isohexane to give
the subtitle compound 8.5g.
1H NMR (CDCl3); δ 6.86 (dt, 1H), 5.73 (dt, 1H), 2.25 - 2.09 (m, 2H), 1.47 (s, 9H), 1.47 - 1.27
(m, 4H), 0.90 (t, 3H)
- (ii) (S)-tert-Butyl 3-(benzyl((S)-1-phenylethyl)amino)heptanoate
n-Butyllithium (2.5M in hexanes, 27.66ml) was added to a stirred solution of (S)-N-benzyl-1-phenylethanamine
(15.59g) in THF (150mL) at -78°C. The reaction mixture was stirred for 30 mins then
the product from step (i) (8.5 g) in THF (50 mL) was added and the reaction mixture
stirred for 2h at -78°C. The mixture was quenched with sat. NH4Cl solution and warmed to rt. The product was partitioned between EtOAc and water,
the organic phase was washed with water, dried, and evaporated. The residue was purified
by column chromatography eluting with 5% EtOAc in isohexane to give the subtitle compound
12.7g.
1H NMR (CDCl3); δ 7.49 - 7.15 (m, 10H), 3.87 - 3.70 (m, 2H), 3.48 (d, 1H), 3.35 - 3.21 (m, 1H),
1.99 - 1.78 (m, 2H), 1.53 (s, 3H), 1.39 (s, 9H), 1.36 - 1.14 (m, 6H), 0.88 (t, 3H)
LC-MS m/z 396 ESI
- (iii) (S)-3-(Benzyl((S)-1-phenylethyl)amino)heptanoic acid
The product from step (ii) (12 g) was dissolved in DCM (40mL) and TFA (2 mL) and the
reaction mixture stirred for 24h. The solvents were evaporated to give the subtitle
compound 17g.
LC-MS m/z 340 ESI
- (iv) (S)-3-(Benzyl((S)-1-phenylethyl)amino)heptan-1-ol
The product from step (iii) (12 g) was dissolved in THF (120mL) and borane-tetrahydrofuran
complex (1M in THF, 132.3ml) added dropwise. The reaction mixture was stirred at rt
overnight then MeOH was added followed by 2M HCl (20mL). The mixture was evaporated
and the residue taken up in MeOH and purified via SCX resin and the residue was further
purified via column chromatography eluting with 10-20% EtOAc in isohexane to give
the subtitle compound 6g.
1H NMR (CDCl3); δ 7.45 - 7.13 (m, 10H), 4.00 - 3.91 (m, 1H), 3.85 (d, 1H), 3.69 (d, 1H), 3.56 -
3.43 (m, 1H), 3.27 - 3.15 (m, 1H), 2.84 - 2.71 (m, 1H), 2.61 (s, 1H), 1.77 - 1.63
(m, 1H), 1.55 (s, 2H), 1.47 - 1.20 (m, 8H), 0.93 (t, 3H)
LC-MS m/z 326 ESI
- (v) (S)-3-Aminoheptan-1-ol
A solution of the product from step (iv) (5g) and 5% Pd/C (0.5g) in EtOH (25mL) was
hydrogenated under 5bar at rt for 5 days. A further portion of 5% Pd/C (1.5g) was
added, and the reaction mixture hydrogenated under 5 bar at rt for a further 1 day.
The reaction mixture was filtered and the solvent evaporated to give the subtitle
compound 1.8g.
1H NMR (CDCl3); δ 3.89 - 3.74 (m, 2H), 2.94 - 2.84 (m, 1H), 2.79 - 2.41 (m, 3H), 1.70 - 1.60 (m,
I H), 1.55 - 1.38 (m, 2H), 1.39 - 1.19 (m, 5H), 0.96 - 0.83 (m, 3H)
- (vi) tert-Butyl 3-(2-amino-4-chloro-6-methylpyrimidin-5-yl)prop-2-ynylcarbamate tert-Butyl
prop-2-ynylcarbamate (3.11 g), 4-chloro-5-iodo-6-methylpyrimidin-2-amine (1.8g) and
bis(triphenylphosphine)palladium(II) chloride (0.469g) were combined in TEA (100mL).
The reaction mixture was purged with nitrogen gas for 3min then copper(I) iodide (0.254g)
added. The resulting mixture was stirred at 70°C for 16h, then cooled to rt and filtered.
The filtrate was washed with water and brine, dried and the solvents evaporated. The
crude material was dissolved in MeOH (20mL), acidified with acetic acid (1 mL) and
purified by SCX and further purified by chromatography eluting 10% MeOH and 0.25%
Ammonia (7N) in DCM to afford the subtitle compound 0.93g.
1H NMR DMSO-d6: δ 7.33 (s, 2H), 4.01 - 3.93 (m, 1H), 3.30 (s, 2H), 2.35 (s, 3H), 1.40 (s, 9H)
LC-MS m/z 297 ESI
- (vii) (S)-tert-Butyl 3-(2-amino-4-(1-hydroxyheptan-3-ylamino)-6-methylpyrimidin-5-yl)prop-2-ynylcarbamate
The product from step (vi) (200mg) and the product from step (v) (177mg) were combined
in butan-1-ol (5mL) and reacted in a CEM Microwave, at 120 °C for 1h. The solvents
were evaporated, and the crude product was purified by chromatography, eluting with
5% MeOH in EtOAc to afford the subtitle compound 170mg.
LC-MS m/z 392 ESI
- (viii) (S)-tert-Butyl 3-(2-amino-4-(1-hydroxyheptan-3-ylamino)-6-methylpyrimidin-5-yl)propylcarbamate
The product from step (vii) (100mg) and Pd/C (30mg) in EtOH (5mL) were hydrogenated
under 3 bar at rt for 16h. The catalyst was filtered off and the solvent evaporated
to give the subtitle compound 76 mg.
LC-MS m/z 396 ESI
- (ix) (S)-3-(2-Amino-5-(3-aminopropyl)-6-methylpyrimidin-4-ylamino)heptan-1-ol
The product from step (viii) (76mg) was dissolved in DCM (5mL) and TFA (5mL) and the
mixture stirred at rt for 1h. The solvent was evaporated and the crude material dissolved
in MeOH (5mL) and purified by SCX. The product was dissolved in THF (10mL) then lithium
hydroxide (12.2mg) in water (5mL) was added. The reaction mixture was heated to reflux
for 1h, the solvents were evaporated and the crude product purified by RPHPLC to afford
the subtitle product 40mg.
LC-MS m/z 297 ESI
- (x) (S)-Methyl 2-(4-((3-(2-amino-4-(1-hydroxyheptan-3-ylamino)-6-methylpyrimidin-5-yl)propylamino)methyl)phenyl)acetate
To a solution of the product from step (ix) (57mg) in THF (5mL) was added (4-formylphenyl)acetic
acid methyl ester (51mg) and acetic acid (0.011 mL). The resulting mixture was stirred
for 5h, sodium triacetoxyborohydride (90mg) was added and the resulting solution stirred
at rt for 16h. TEA (0.013mL) was added and the reaction mixture stirred for a further
2h. The solvents were evaporated, the residue redissolved in MeOH and purified by
RPHPLC to afford the title compound 2.7mg.
1H NMR DMSO-d6: δ 7.28 (d, 2H), 7.20 (d, 2H), 6.09 - 6.03 (m, 1H), 5.53 (s, 2H), 4.53 - 4.43 (m,
1H), 4.19 - 4.09 (m, 1H), 3.64 (s, 3H), 3.61 (s, 2H), 3.42 - 3.35 (m, 2H), 3.30 -
3.28 (m, 2H), 2.40 - 2.31 (m, 2H), 2.06 (s, 3H), 1.70 - 1.58 (m, 2H), 1.56 - 1.39
(m, 4H), 1.31 - 1.18 (m, 5H), 0.84 (s, 3H)
LC-MS m/z 458 ESI
Example 19
(S)-Methyl 2-(4-((N-(3-(2-amino-4-(1-hydroxyheptan-3-ylamino)-6-methylpyrimidin-5-yl)propyl)-2-(dimethylamino)acetamido)methyl)phenyl)acetate
[0197]

[0198] The product from Example 18 (5.7mg) was dissolved in acetonitrile (2mL) and chloroacetyl
chloride (0.991 µL) added. The reaction mixture was stirred at rt for 16h. The solvent
was evaporated and dimethylamine (2M in MeOH, 0.016mL) in MeOH (1mL) was added. The
reaction mixture was stirred for 5 h, then more dimethylamine (2M in MeOH, 0.016mL)
added and the reaction mixture stirred for a further 16h. A further aliquot of dimethylamine
(0.039mL) was added and the reaction mixture stirred for 16h. The solvents were evaporated
and the residue purified by RPHPLC to afford the title compound 1.5mg.
1H NMR DMSO-
d6 @90°C; δ 7.21 (d, 2H), 7.14 (d, 2H), 5.48 - 5.42 (m, 1H), 5.19 (s, 2H), 3.60 (s,
5H), 3.49 - 3.38 (m, 2H), 3.36 - 3.25 (m, 2H), 3.06 (s, 2H), 2.99 - 2.95 (m, 2H),
2.33 - 2.28 (m, 2H), 2.18 (s, 6H), 2.02 (s, 3H), 1.72 - 1.46 (m, 6H), 1.33 - 1.20
(m, 6H), 0.84 (t, 3H)
LC-MS m/z 543 ESI
Example 20
Methyl 2-(3-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl)acetate
[0199]
- (i) [3-(2-Amino-4-hydroxy-6-methyl-pyrimidin-5-ylmethyl)]-benzoic acid ethyl ester
Guanidine carbonate (2.71g) was added to a stirred solution of 3-(2-ethoxycarbonyl-3-oxobutyl)-benzoic
acid methyl ester (2.12g) in EtOH (40mL). The reaction mixture was heated to reflux
for 6h and allowed to cool. The solvent was evaporated under reduced pressure and
the residue suspended in water (30mL). The resulting precipitate was collected by
filtration and the solid suspended in EtOAc (30mL). The solid was collected by filtration
to give the subtitle compound as a colourless solid 2.12g that was used without further
purification.
1H NMR DMSO-d6: δ 7.77 - 7.73 (m, 2H), 7.46 - 7.36 (m, 2H), 6.50 (s, 2H), 4.29 (q, 2H), 3.70 (s,
2H), 2.01 (s, 3H), 1.30 (t, 3H)
- (ii) [3-(2-Amino-4-chloro-6-methyl-pyrimidin-5-ylmethyl)]-benzoic acid ethyl ester
The product from step (i) (1.9g) was added to phosphorous oxychloride (30mL) and the
mixture was heated at 100°C for 15h. The mixture was allowed to cool and the phosphorous
oxychloride evaporated under reduced pressure. The residue was diluted with water
(10mL) and the pH of the mixture was adjusted to pH ∼7 using sodium bicarbonate. The
mixture was then heated at 50°C for 2h and the aqueous was extracted with EtOAc. The
combined organic phase was dried and evaporated under reduced pressure to give the
subtitle compound as a pale yellow solid 1.65g that was used without further purification.
1H NMR DMSO-d6: δ 7.80 (d, 1H), 7.71 (s, 1H), 7.49 - 7.34 (m, 2H), 6.92 (s, 2H), 4.30 (q, 2H), 4.04
(s, 2H), 2.21 (s, 3H), 1.30 (t, 3H)
- (iii) [3-(2-Amino-4-methyl-6-pentylamino-pyrimidin-5-ylmethyl)]-benzoic acid ethyl
ester
Pentylamine (2.5mL) was added to a stirred solution of the product from step (ii)
(1.65g) in NMP (3mL). The mixture was heated at 150°C for 15h and allowed to cool.
The solution was diluted with EtOAc (50mL) and saturated aqueous NaHCO3 (50mL) added. The aqueous phase was separated and the organic phase washed with water,
dried and evaporated under reduced pressure. The residue was purified by chromatography
eluting with 2% to 5% MeOH in DCM to give the subtitle compound as an orange solid.
0.7g.
1H NMR DMSO-d6: δ 7.79 - 7.71 (m, 2H), 7.45 - 7.32 (m, 2H), 6.36 (s, 1H), 5.78 (s, 2H), 4.29 (q,
2H), 3.82 (s, 2H), 3.29 - 3.22 (m, 2H), 2.01 (s, 3H), 1.49 - 1.38 (m, 2H), 1.28 -
1.07 (m, 4H), 0.79 (t, 3H)
- (iv) [3-(2-Amino-4-methyl-6-pentylamino-pyrimidin-5-ylmethyl)-phenyl]-methanol
A solution of the product from step (iii) (0.7g) in THF (10mL) was added to a solution
of lithium aluminium hydride (1M in THF, 4.1 mL) in THF (10mL) at 0°C. The mixture
was stirred at rt for 2h, sodium sulfate decahydrate (10g) was added and the suspension
stirred for 1h. The suspension was filtered and the filtrate diluted with saturated
aq ammonium chloride (20mL). The aqueous phase was separated and the organic phase
dried and evaporated under reduced pressure to give the subtitle compound 0.60g, which
was used without further purification.
1H NMR DMSO-d6: δ 7.19 (t, 1H), 7.12 - 7.05 (m, 2H), 6.97 (d, 1H), 6.34 - 6.27 (m, 1H), 5.81 (s,
2H), 5.15 - 5.08 (m, 1H), 4.43 (d, 2H), 3.73 (s, 2H), 3.26 (q, 2H), 2.03 (s, 3H),
1.45 (quintet, 2H), 1.28 - 1.10 (m, 4H), 0.82 (t, 3H)
- (v) 5-(3-Chloromethyl-benzyl)-6-methyl-N4-pentyl-pyrimidine-2,4-diamine
Thionyl chloride (0.17mL) was added to a stirred solution of the product from step
(iv) (0.60g) in DCM (10mL) at rt. The mixture was stirred for 1h and the solvent evaporated
under reduced pressure to give the subtitle compound as a yellow oil 0.62g that was
used without further purification.
1H NMR DMSO-d6: δ 8.03 - 7.94 (m, 1H), 7.50 (s, 2H), 7.34 - 7.26 (m, 3H), 7.21 (s, 1H), 7.13 (d,
1H), 4.72 (s, 2H), 3.87 (s, 2H), 3.37 (q, 2H), 2.20 (s, 3H), 1.47 (quintet, 2H), 1.26
- 1.17 (m, 2H), 1.15 - 1.06 (m, 2H), 0.80 (t, 3H)
- (vi) [3-(2-Amino-4-methyl-6-pentylamino-pyrimidin-5-ylmethyl)-phenyl]-aeetonitrile
Potassium cyanide (0.61 g) was added to a stirred solution of the product from step
(v) (0.62g) in DMSO (5mL) and DMF (5mL) and the mixture stirred at rt for 1h. The
reaction mixture was diluted with saturated aqueous NaHCO3 (10mL) and the aqueous phase was extracted with EtOAc. The combined organic phase
was washed with water, dried and evaporated under reduced pressure to give the subtitle
compound as a yellow oil 0.59g that was used without further purification.
1H NMR DMSO-d6: δ 7.27 (t, 1H), 7.15 - 7.04 (m, 3H), 6.17 (t, 1H), 5.66 (s, 2H), 3.97 (s, 2H), 3.75
(s, 2H), 3.24 (q, 2H), 2.01 (s, 3H), 1.49 - 1.39 (m, 2H), 1.27 - 1.09 (m, 4H), 0.82
(t, 3H)
- (vii) Methyl 2-(3-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl)acetate
[0200] A 5M aqueous solution of potassium hydroxide (5mL) was added to a stirred solution
of the product from step (vi) (0.59 g) in MeOH (10mL). The mixture was stirred at
65°C for 15h and allowed to cool. The organic solvent was removed under reduced pressure
and the aqueous phase acidifed to pH 7 with concentrated HCl. The aqueous phase was
extracted with EtOAc and the combined organic phase dried and evaporated under reduced
pressure. The residue was dissolved in MeOH (10mL) and concentrated sulfuric acid
(5mL) added. The mixture was heated at 70°C for 2h and allowed to cool. The mixture
was poured into saturated aqueous NaHCO
3 (30mL) and the aqueous phase extracted with EtOAc. The combined organic phase was
dried and evaporated under reduced pressure. The residue was purified by chromtography
eluting with 5% MeOH in DCM to give the title compound 0.24g.
1H NMR DMSO-
d6: δ 7.36 (s, 1H), 7.23 (t, 1H), 7.11 - 6.98 (m, 3H), 6.77 (s, 2H), 3.79 (s, 2H), 3.62
(s, 2H), 3.59 (s, 3H), 3.30 - 3.26 (m, 2H), 2.12 (s, 3H), 1.47 (quintet, 2H), 1.29
- 1.06 (m, 4H), 0.81 (t, 3H)
LC-MS m/z 357 ESI
Example 21
Methyl 2-(4-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)-3-methoxyphenyl)acetate
[0201]
- (i) Methyl 4-(2-(ethoxycarbonyl)-3-oxobutyl)-3-methoxybenzoate
Sodium hydride (60% in mineral oil; 1.45g) was added portionwise over 10min to a solution
of ethyl acetoacetate (4.4mL) in THF (60mL) at 0°C. The resulting suspension was stirred
at 0°C for 10min and a solution of methyl 4-(bromomethyl)-3-methoxybenzoate (7.5g)
in THF (40mL) added portionwise over 10min. The mixture was warned to 70°C and stirred
for 15h. The mixture was allowed to cool and then poured cautiously into ice/water
(300mL) and stirred for 30min. The aqueous phase was extracted with EtOAc and the
combined organic phase was dried filtered and evaporated to afford crude product.
The reaction was repeated on an identical scale and the two batches of crude product
were combined and purified by chromatography eluting with 20-30% EtOAc in isohexane
to give the subtitle compound as a colorless oil 14.70g.
1H NMR DMSO-d6: δ 7.48 (dd, 1H), 7.45 (d, 1H), 7.24 (d, 1H), 4.05 (q, 2H), 3.95 (dd, 1H), 3.86 (s,
3H), 3.84 (s, 3H), 3.10 (dd, 1H), 3.00 (dd, 1H), 2.17 (s, 3H), 1.09 (t, 3H)
- (ii) Methyl 4-((2-amino-4-hydroxy-6-methylpyrimidin-5-yl)methyl)-3-methoxybenzoate
Guanidine carbonate (8.73g) was added in one portion to a solution of the product
from step (i) (14.7g) in MeOH (200mL). The resulting mixture was stirred at 65°C for
16h and allowed to cool. The precipitate was collected by filtration and suspended
in water (50mL). The solid was collected by filtration, washed with MeOH (20mL) and
EtOAc (20mL) to give the subtitle compound as a colourless solid 8.60 g that was used
without further purification.
1H NMR DMSO-d6: δ 10.78 (s, 1H), 7.46 (d, 2H), 7.45 (s, 2H), 6.98 (d, 1H), 6.34 (s, 2H), 3.89 (s,
3H), 3.83 (s, 3H), 3.61 (s, 2H), 1.93 (s, 3H)
LC-MS m/z 304 ESI
- (iii) Methyl 4-((2-amino-4-chloro-6-methylpyrimidin-5-yl)methyl)-3-methoxybenzoate
The product from step (ii) (8.6g) was added to phosphorous oxychloride (50ml) and
the resulting suspension stirred at 100°C for 15h. The reaction mixture was allowed
to cool and the phosphorous oxychloride evaporated under reduced pressure. The residue
was diluted with water (100mL) and the suspension adjusted to pH 7 with NaHCO3. The mixture was heated at 50°C for 1h and allowed to cool. The solid was collected
by filtration, washed with water, EtOAc and dried under vacuum to give the subtitle
compound 9.05g.
1H NMR DMSO-d6: δ 7.50 (s, 1H), 7.49 (d, 1H), 6.90 (s, 2H), 6.81 (d, 1H), 3.92 (s, 3H), 3.90 (s,
3H), 3.84 (s, 2H), 2.16 (s, 3H).
- (iv) Methyl 4-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)-3-methoxybenzoate
Pentylamine (7.2mL) was added to a solution of the product from step (iii) (5g) in
NMP (80mL). The resulting solution was stirred at 150°C for 15h. The reaction mixture
was allowed to cool, diluted with EtOAc and washed with water and brine. The organic
phase was dried and evaporated under reduced pressure. The residue was suspended in
diethyl ether (20mL) and the solid was collected by filtration to give the subtitle
compound as a colourless solid 1.2g that was used without further purification.
1H NMR DMSO-d6: δ 7.48 (d, 1H), 7.45 (dd, 1H), 6.81 (d, 1H), 6.07 (t, 1H), 5.68 (s, 2H), 3.92 (s,
3H), 3.83 (s, 3H), 3.68 (s, 2H), 3.25 - 3.20 (m, 2H), 1.93 (s, 3H), 1.47 - 1.38 (m,
2H), 1.27 - 1.08 (m, 4H), 0.81 (t, 3H)
LC-MS m/z 374 ESI
- (v) (4-((2-Amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)-3-methoxyphenyl)methanol
A solution of the product from step (iv) (2.4g) in THF (50mL) was added portionwise
over 10min to a stirred solution of lithium aluminum hydride (1M in THF; 12.89mL)
in THF (50mL) at 0 °C under nitrogen. The resulting mixture was stirred at 0 °C for
10min and then at rt for 1h. EtOAc (20mL) was added portionwise over 10min and the
resulting mixture stirred for a further 20min. The mixture was added portionwise to
2M NaOH (300mL) and stirred for 30min. The resulting suspension was filtered through
a pad of celite and the resulting biphasic filtrate separated. The aqueous phase was
extracted with EtOAc (200mL) and the combined organic phase was dried, filtered and
evaporated. The crude product was purified by chromatography, eluting with 5 to 10%
MeOH in DCM. to afford the subtitle compound as a colorless gum 0.94g.
1H NMR DMSO-d6: δ 6.94 (s, 1H), 6.75 (d, 1H), 6.66 (d, 1H), 6.03 - 5.96 (m, 1H), 5.67 (s, 2H), 5.10
(t, 1H), 4.44 (d, 2H), 3.84 (s, 3H), 3.59 (s, 2H), 3.25 - 3.19 (m, 2H), 1.98 (s, 3H),
1.43 (quintet, 2H), 1.30 - 1.10 (m, 4H), 0.82 (t, 3H)
LC-MS m/z 345 ESI
- (vi) 5-(4-(Chloromethyl)-2-methoxybenayl)-6-methyl-N4-pentylpyrimidine-2,4-diamine
Thionyl chloride (0.239mL) was added portionwise to a solution of the product from
step (v) (0.94g) in DCM (20mL) under nitrogen. The resulting solution was stirred
at rt for 1h. The solvent was evaporated under reduced pressure to give the subtitle
compound as a colourless gum 0.99g that was useed without purification.
1H NMR DMSO-d6: δ 7.88 (t, 1H), 7.46 (s, 2H), 7.10 (d, 1H), 6.92 (dd, 1H), 6.79 (d, 1H), 4.73 (s,
2H), 3.86 (s, 3H), 3.69 (s, 2H), 3.38 - 3.33 (m, 2H), 2.11 (s, 3H), 1.48 (quintet,
2H), 1.30 - 1.11 (m, 4H), 0.83 (t, 3H)
LC-MS m/z 363 ES+
- (vii) 2-(4-((2-Amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)-3-methoxyphenyl)acetonitrile
Potassium cyanide (0.53g) was added to a solution of the product from step (vi) (0.99g)
in DMSO (10mL) and DMF (10mL) under nitrogen. The resulting mixture was stirred at
rt for 20h and diluted with saturated aqueous NaHCO3 (50mL). The mixture was extracted with EtOAc and the combined organic phase was washed
with water and brine, dried, filtered and evaporated. The crude product was purified
by chromatography, eluting with 5% MeOH in DCM to afford the subtitle compound as
an orange solid 0.6g.
1H NMR DMSO-d6: δ 6.97 (d, 1H), 6.80 (dd, 1H), 6.70 (d, 1H), 6.10 (t, 1H), 5.75 (s, 2H), 3.96 (s,
2H), 3.86 (s, 3H), 3.60 (s, 2H), 3.25 - 3.20 (m, 2H), 1.96 (s, 3H), 1.43 (quintet,
2H), 1.28 - 1.10 (m, 4H), 0.82 (t, 3H)
- (viii) 2-(4-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)-3-methoxyphenyl)acetic
acid
A 5M aqueous solution of potassium hydroxide (5mL) was added to a solution of the
product from step (vii) (0.60g) in MeOH (10mL). The resulting mixture was stirred
at 65°C for 15h. The mixture was allowed to cool and the solvent evaporated under
reduced pressure. The resulting aqueous mixture was neutralised with 2M HCl and extracted
with EtOAc. The combined organic phase was dried, filtered and evaporated to give
the subtitle compound as a colourless solid 0.329g that was used without further purification.
1H NMR DMSO-d6: δ 6.88 (d, 1H), 6.70 (dd, 1H), 6.64 (d, 1H), 6.30 - 6.21 (m, 1H), 5.99 (s, 2H),
3.83 (s, 3H), 3.59 (s, 2H), 3.49 (s, 3H), 3.27 - 3.18 (m, 2H), 1.98 (s, 3H), 1.44
(quintet, 2H), 1.30 - 1.09 (m, 4H), 0.82 (t, 3H)
- (ix) Methyl 2-(4-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)-3-methoxyphenyl)acetate
The product from step (vii) (0.329g) was added in one portion to a mixture of sulfuric
acid (2ml) and MeOH (4mL). The resulting solution was stirred at 70°C for 2h. The
mixture was allowed to cool and poured into saturated aqueous NaHCO3 (20mL). The aqueous was extracted with EtOAc and the combined organic phase was dried,
filtered and evaporated. The crude product was purified by RPHPLC to afford a colourless
gum that was triturated with hexane (5mL). The solid was collected by filtration to
give the title compound as a colorless solid 0.089g.
1H NMR DMSO-d6: δ 6.89 (d, 1H), 6.70 (dd, 1H), 6.64 (d, 1H), 5.98 (t, 1H), 5.63 (s, 2H), 3.84 (s,
3H), 3.61 (s, 2H), 3.59 (s, 3H), 3.58 (s, 2H), 3.26 - 3.18 (m, 2H), 1.97 (s, 3H),
1.43 (quintet, 2H), 1.29 - 1.10 (m, 4H), 0.82 (t, 3H)
LC-MS m/z 387 ESI
Example 22
Methyl 2-(4-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)-3-fluorophenyl)acetate
[0202]
- (i) Methyl 4-(2-(ethoxycarbonyl)-3-oxobutyl)-3-fluorobenzoate
Sodium hydride (60% dispersion in mineral oil; 2.45g) was added portionwise over 10min
to a solution of ethyl acetoacetate (7.5mL) in THF (60 mL) at 0°C under nitrogen.
The resulting mixture was stirred at 0°C for 10min and a solution of methyl 4-(bromomethyl)-3-fluorobenzoate
(12.1g) in THF (40mL) added over 10min. The mixture was heated to 65°C for 15h and
allowed to cool. The mixture was poured cautiously into ice/water (300mL) and the
aqueous extracted with EtOAc. The combined organic phase was dried, filtered and evaporated.
The crude product was purified by chromatography eluting with 10 to 20% EtOAc in isohexane
to give the subtitle compound as a colorless oil 11.10g.
1H NMR DMSO-d6: δ 7.73 (d, 1H), 7.64 (d, 1H), 7.46 (dd, 1H), 4.11 - 4.00 (m, 2H), 3.86 (s, 3H),
3.65 - 3.58 (m, 1H), 3.22 - 3.04 (m, 2H), 2.22 (s, 3H), 1.10 (t, 3H)
- (ii) Methyl 4-((2-amino-4-hydroxy-6-methylpyrimidin-5-yl)methyl)-3-fluorobenzoate
Guanidine carbonate (6.86g) was added to a stirred solution of the product from step
(i) (11.1g) in MeOH (200mL). The resulting mixture was stirred at 70°C for 15h. The
mixture was allowed to cool to rt and the resulting precipitate collected by filtration.
The solid was suspended in water (50mL), collected by filtration and washed with MeOH
to give the subtitle compound as a colourless solid 6.60g that was used without further
purification.
1H NMR DMSO-d6: δ 10.83 (s, 1H), 7.68 (d, 1H), 7.63 (d, 1H), 7.23 (dd, 1H), 6.39 (s, 2H), 3.85 (s,
3H), 3.70 (s, 2H), 2.00 (s, 3H)
LC-MS m/z 292 ESI
- (iii) Methyl 4-((2-amino-4-chloro-6-methylpyrimidin-5-yl)methyl)-3-fluorobenzoate
The product from step (ii) (6.6g) was added to phosphorous oxychloride (40ml) under
nitrogen. The resulting mixture was stirred at 90°C for 15h. The phosphorous oxychloride
was evaporated under reduced pressure and the residue cautiously diluted with water
(50mL). The aqueous phase was neutralised with NaHCO3 and heated at 50°C for 1h. The mixture was allowed to cool and the precipitate was
collected by filtration. The solid was suspended in MeCN (40mL) and collected by filtration
to give the subtitle compound as a cream solid 3.70g that was used without further
purification.
1H NMR DMSO-d6: δ 7.72 (d, 1H), 7.69 (d, 1H), 7.08 (dd, 1H), 6.95 (s, 2H), 4.02 (s, 2H), 3.85 (s,
3H), 2.22 (s, 3H)
LC-MS m/z 310 ESI
- (iv) Methyl 4-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)-3-fluorobenzoate
Pentylamine (5.82mL) was added to a solution of the product from step (iii) (3.1g)
in dioxane (50mL). The resulting mixture was stirred at 100°C for 50h. The mixture
was allowed to cool and then the solvent was evaporated under reduced pressure. The
crude product was purified by flash silica chromatography eluting with 2 to 5% MeOH
in DCM. to give the subtitle compound as a yellow solid 1.52g.
1H NMR DMSO-d6: δ 7.70 - 7.63 (m, 2H), 6.95 (dd, 1H), 6.31 (t, 1H), 5.75 (s, 2H), 3.84 (s, 3H),
3.80 (s, 2H), 3.28 - 3.20 (m, 2H), 1.94 (s, 3H), 1.51 - 1.36 (m, 2H), 1.31 - 1.10
(m, 4H), 0.81 (t, 3H)
- (v) (4-((2-Amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)-3-fluorophenyl)methanol
A solution of the product from step (iv) (1.52g) in THF (30mL) was added portionwise
to a stirred solution of lithium aluminium hydride (1M in THF; 8.43 mL) in THF (30
mL) at 0°C under nitrogen. The resulting mixture was stirred at rt for 2h. EtOAc (10mL)
was added cautiously to the reaction mixture and the mixture added portionwise to
2M NaOH (100mL). The mixture was stirred for 30min and the aqueous solution was extracted
with EtOAc. The combined organic phase was dried, filtered and evaporated. The crude
product was purified by chromatography elutinhg with 2 to 5% MeOH in acetonitrile
to give the subtitle compound as a yellow oil 0.85g.
1H NMR DMSO-d6: δ 7.22 - 6.90 (m, 2H), 6.79 (s, 1H), 6.28 (s, 2H), 5.36 - 5.09 (m, 1H), 4.47 (s,
2H), 4.11 (s, 1H), 3.72 (s, 2H), 3.29 - 3.12 (m, 2H), 1.97 (s, 3H), 1.57 - 1.39 (m,
2H), 1.37 - 1.15 (m, 4H), 0.94 - 0.78 (m, 3H)
- (vi) 5-(4-(Chloromethyl)-2-fluorobenzyl)-6-methyl-N4-pentylpyrimidine-2,4-diamine
Thionyl chloride (0.224mL) was added to a solution of the product from step (v) (0.85g)
in DCM (15mL) under nitrogen. The resulting mixture was stirred at rt for 2h. The
reaction mixture was evaporated to dryness under reduced pressure to give the subtitle
compound as a yellow solid 0.85g that was used without purification.
1H NMR DMSO-d6: δ 12.24 (s, 1H), 8.02 (t, 1H), 7.46 (s, 2H), 7.30 (dd, 1H), 7.17 (dd, 1H), 6.96
(dd, 1H), 4.74 (s, 2H), 3.83 (s, 2H), 3.39 - 3.32 (m, 2H), 2.14 (s, 3H), 1.54 - 1.41
(m, 2H), 1.32 - 1.08 (m, 4H), 0.82 (t, 3H)
- (vii) 2-(4-((2-Amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)-3-fluorophenyl)acetonitrile
Potassium cyanide (0.473g) was added to a stirred solution of the product from step
(vi) (0.85g) in DMSO (10mL) and DMF (10mL). The mixture was stirred at rt for 15h,
diluted with EtOAc, washed with saturated NaHCO3 solution, saturated brine dried, filtered and evaporated. The crude product was purified
by chromatography eluting with 0 to 5% MeOH in DCM to afford the subtitle compound
as a yellow solid 0.530g.
1H NMR DMSO-d6: δ 7.17 (d, 1H), 7.06 (d, 1H), 6.83 (dd, 1H), 6.34 - 6.25 (m, 1H), 5.76 (s, 2H),
4.01 (s, 2H), 3.72 (s, 2H), 3.27 - 3.22 (m, 2H), 1.95 (s, 3H), 1.45 (quintet, 2H),
1.30-1.11 (m, 4H), 0.83 (t, 3H)
- (viii) 2-(4-((2-Amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)-3-fluorophenyl)acetic
acid
A 5M aqueous solution of potassium hydroxide (3.10mL) was added to a solution of the
product of step (vii) (0.53g) in MeOH (6mL). The mixture was stirred at 65°C for 15h
and allowed to cool. The solvent was evaporated under reduced pressure and the resulting
aqueous solution adjusted to pH ∼7 with conc. HCl. The aqueous phase was extracted
with DCM and EtOAc, the combined organic phase was evaporated under reduced pressure
to give the subtitle compound as a colourless solid 0.547g.
1H NMR DMSO-d6: δ 7.08 (dd, 1H), 6.95 (dd, 1H), 6.80 (dd, 1H), 6.52 - 6.42 (m, 1H), 3.74 (s, 2H),
3.55 (s, 2H), 3.28 - 3.24 (m, 2H), 2.03 (s, 3H), 1.50 - 1.43 (m, 2H), 1.29 - 1.11
(m, 4H), 0.83 (t, 3H)
- (ix) Methyl 2-(4-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)-3-fluorophenyl)acetate
Sulfuric acid (3ml) was added to a solution of the product from step (viii) (0.54g)
in MeOH (6mL). The mixture was heated to 70°C for 2h and allowed to cool. The mixture
was diluted with cold water (10mL) and the pH adjusted to ∼7 using NaHCO3. The aqueous phase was extracted with EtOAc and the combined organic phase was dried,
filtered and evaporated. The crude product was purified by RPHPLC to afford the title
compound as a colourless solid 0.08g.
1H NMR DMSO-d6: δ 7.08 (d, 1H), 6.95 (d, 1H), 6.76 (dd, 1H), 6.25 (t, 1H), 5.70 (s, 2H), 3.70 (s,
3H), 3.66 (s, 2H), 3.60 (s, 2H), 3.27 - 3.22 (m, 2H), 1.95 (s, 3H), 1.45 (quintet,
2H), 1.29 - 1.11 (m, 4H), 0.83 (t, 3H)
LC-MS m/z 375 ESI
Example 23
Methyl 2-(4-(2-(3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propylamino)-2-oxoethyl)phenyl)acetate
[0203]
- (i) {4-[2-({3-[2-Amino-4-methyl-6-(pentylamino)pyrimidin-5-yl]propyl}amino)-2-oxoethyl]phenyl}acetic
acid
A solution of T3P (1.591ml, 1.57M in THF) was added to a mixture of the product from example 1 step
(v) (0.2g), TEA (0.333ml) and 2,2'-(1,4-phenylene)diacetic acid (0.463g) in THF (15mL)
and the mixture stirred at rt overnight. The reaction was diluted with EtOAc, washed
with water, dried and evaporated under reduced pressure. Used crude in next step.
LC-MS m/z 428 APCI+
- (ii) Methyl 2-(4-(2-(3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propylamino)-2-oxoethyl)phenyl)acetate
[0204] The product from step (i) was dissolved in MeOH (20mL) then a solution of HCl in
dioxane (4M, 0.3ml) was added and stirred overnight. Solvent was removed and the residue
purified by RPHPLC to afford the title compound, 0.032g.
1H NMR DMSO-
d6: δ 8.06 - 7.98 (m, 1H), 7.23 - 7.14 (m, 5H), 6.19 - 6.12 (m, 1H), 5.52 - 5.45 (m,
2H), 3.67 - 3.57 (m, 7H), 3.13 - 3.02 (m, 2H), 2.32 - 2.20 (m, 2H), 2.00 (s, 3H),
1.55 - 1.37 (m, 4H), 1.33 - 1.22 (m, 4H), 0.85 (t, 3H).
LC-MS m/z 442 multimode+
Example 24
Methyl 2-(3-(2-(3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propylamino)-2-oxoethyl)phenyl)acetate
[0205]

[0206] The title compound was prepared using the method of example 23.
1H NMR DMSO-
d6: δ 8.05 - 7.98 (m, 1H), 7.28 - 7.21 (m, 1H), 7.16 - 7.09 (m, 3H), 6.18 - 6.13 (m,
1H), 5.52 - 5.47 (m, 2H), 3.64 (s, 2H), 3.60 - 3.58 (m, 3H), 3.39 (s, 2H), 3.29 -
3.22 (m, 2H), 3.12 - 3.04 (m, 2H), 2.30 - 2.22 (m, 2H), 1.97 (s, 1H), 1.53 - 1.41
(m, 4H), 1.35 - 1.19 (m, 4H), 0.86 (t, 3H)
LC-MS m/z 442 multimode+
Example 25
Methyl 2-(3-((3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propylarnino)methyl)phenoxy)acetate
[0207]

[0208] The product from example 1 step (v) (0.2g) was dissolved in THF (10mL) then methyl
2-(3-formylphenoxy)acetate (0.154g) was added and stirred at rt overnight. Sodium
borohydride (0.0301mg) was added and stirred for 3hr. The reaction was quenched with
water and extracted with EtOAc, dried and solvent removed under reduced pressure.
The residue was purified by RPHPLC to afford the title compound 0.038g.
1H NMR DMSO-
d6: δ 6.98 - 6.89 (m, 2H), 6.82 - 6.72 (m, 1H), 6.67 - 6.58 (m, 1H), 5.61 - 5.52 (m,
2H), 4.81 - 4.70 (m, 2H), 3.71 - 3.67 (m, 3H), 3.68 - 3.65 (m, 2H), 3.27 - 3.18 (m,
2H), 2.48 - 2.41 (m, 2H), 2.38 - 2.31 (m, 2H), 2.07 - 2.04 (m, 3H), 1.57 - 1.42 (m,
4H), 1.30 - 1.17 (m, 4H), 0.85 (t, 3H)
LC-MS m/z 429 multimode+
Example 26
Methyl 2-(4-((N-(3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propyl)-2-(3-(4-(methylsulfonyl)phenyl)piperidin-1-yl)acetamido)methyl)phenyl)acetate
[0209]

The title compound was prepared by the method of example 3 using the product from
example 2 and the appropriate amine.
1H NMR DMSO-
d6: δ 7.88 - 7.79 (m, 2H), 7.56 - 7.47 (m, 2H), 7.27 (d, 1H), 7.21 - 7.15 (m, 2H), 7.14
- 7.08 (m, 1H), 6.21 - 6.11 (m, 1H), 5.50 (s, 2H), 4.77 - 4.59 (m, 1H), 4.56 - 4.35
(m, 1H), 3.70 - 3.56 (m, 5H), 3.29 - 3.19 (m, 3H), 3.17 (s, 3H), 3.14 - 3.04 (m, 1H),
2.86 - 2.78 (m, 2H), 2.77 - 2.63 (m, 1H), 2.38 - 2.07 (m, 4H), 2.05 - 1.93 (m, 2H),
1.85 - 1.54 (m, 5H), 1.55 - 1.40 (m, 5H), 1.32 - 1.18 (m, 5H), 0.84 (sextet, 3H)
LC-MS m/z 693 multimode+
Example 27
Methyl 2-(4-((N-(3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propyl)-2-morpholinoacetamido)methyl)phenyl)acetate
[0210]

[0211] The title compound was prepared by the method of example 3 using the product from
example 2 and the appropriate amine.
1H NMR DMSO-
d6: δ 7.29 - 7.08 (m, 4H), 6.23 - 6.11 (m, 1H), 5.56 - 5.44 (m, 2H), 4.64 (s, 1H), 4.47
(s, 1H), 3.68 - 3.63 (m, 2H), 3.60 (s, 3H), 3.56 - 3.45 (m, 4H), 3.30 - 3.21 (m, 4H),
3.11 (s, 1H), 3.05 (s, 2H), 2.41 - 2.30 (m, 4H), 2.02 (s, 2H), 1.98 (s, 1H), 1.66
- 1.57 (m, I H), 1.52 - 1.43 (m, 3H), 1.33 - 1.19 (m, 5H), 0.88 - 0.82 (m, 3H)
LC-MS m/z 541 multimode+
Example 28
Methyl 2-(4-((N-(3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propyl)-2-(4-phenylpiperidin-1-yl)acetamido)methyl)phenyl)acetate
[0212]

[0213] The title compound was prepared by the method of example 3 using the product from
example 2 and the appropriate amine.
1H NMR DMSO-
d6: δ 7.34 - 7.09 (m, 9H), 6.23 - 6.12 (m, 1H), 5.54 - 5.46 (m, 2H), 4.71 (s, 1H), 4.48
(s, 1H), 3.70 - 3.62 (m, 2H), 3.59 (s, 2H), 3.29 - 3.22 (m, 4H), 3.18 - 3.05 (m, 2H),
2.94 - 2.75 (m, 2H), 2.38 - 2.18 (m, 3H), 2.17 - 1.97 (m, 5H), 1.79 - 1.42 (m, 8H),
1.33 - 1.18 (m, 5H), 0.90 - 0.79 (m, 3H)
LC-MS m/z 615 multimode+
Example 29
Methyl 2-(4-((N-(3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propyl)-2-(piperidin-1-yl)acetamido)methyl)phenyl)acetate
[0214]

[0215] The title compound was prepared by the method of example 3 using the product from
example 2 and the appropriate amine.
1H NMR DMSO-
d6: δ 7.28 - 7.07 (m, 4H), 6.16 (t, 1H), 5.50 (d, 2H), 4.68 (s, 1H), 4.46 (s, 1H), 3.68
- 3.57 (m, 4H), 3.28 - 3.13 (m, 5H), 3.07 - 2.95 (m, 2H), 2.37 - 2.25 (m, 6H), 2.05
- 1.94 (m, 3H), 1.66 - 1.38 (m, 7H), 1.39 - 1.18 (m, 7H), 0.86 (t, 3H)
LC-MS m/z 539 multimode+
Example 30
(S)-Methyl 2-(4-((2-amino-4-(1-hydroxypentan -2-ylamin o)-6-methylp yr imidin-5-yl)methyl)-3-methoxyphenyl)acetate
[0216]
- (i) (4-((2-Amino-4-chloro-6-methylpyrimidin-5-yl)methyl)-3-methoxyphenyl)methanol
A solution of diisobutylaluminium hydride (1M in hexanes, 5.44mL) was added over 10min
to a suspension of the product from example 21 step (iii) (0.5g) in THF (10mL) at
0°C. The mixture was allowed to warm to rt and stirred for 1h. EtOAc (10mL) was added
cautiously and then the reaction mixture was added to ice/water (100mL). The mixture
was stirred for 30min and then diluted with EtOAc (50mL). The organic phase was separated
and the aqueous was extracted with EtOAc. The combined organic phase was dried, filtered
and evaporated to afford the subtitle compound, 0.39g.
1H NMR (DMSO-d6); δ 6.96 (s, 1H), 6.84 (s, 2H), 6.78 (d, 1H), 6.58 (d, 1H), 5.13 (t,
1H), 4.45 (d, 2H), 3.83 (s, 3H), 3.81 (s, 2H), 2.15 (s, 3H)
- (ii) 4-Chloro-5-(4-(chloromethyl)-2-methoxybenzyl)-6-methylpyrimidin-2-amine Thionyl
chloride (0.12mL) was added to a solution of the product from step (i) (0.39g) in
DCM (10mL) at 0 °C. The reaction mixture was stirred at rt for 1h and then the solvent
was evaporated under reduced pressure to give the subtitle compound (0.40g) which
was used without purification.
1H NMR DMSO-d6: δ 7.09 (1H, s), 6.92 (1H, d), 6.66 (1H, d), 4.72 (2H, s), 3.92 - 3.73 (5H, m), 2.17
(3H, s)
- (iii) 2-(4-((2-Amino-4-chloro-6-methylpyrimidin-5-yl)methyl)-3-methoxyphenyl) acetonitrile
Potassium cyanide (0.17g) was added to a stirred solution of the product from step
(ii) (0.40g) in DMSO (5mL) and DMF (5mL). The mixture was stirred at rt for 15h, diluted
with water and then extracted with EtOAc. The combined organic phase was dried, filtered
and evaporated to give the subtitle compound, 0.20g.
1H NMR (DMSO-d6); δ 6.98 (1H, d), 6.86 (2H, s), 6.83 (1H, dd), 6.66 (1H, d), 3.98 (2H,
s), 3.85 (3H, s), 3.82 (2H, s), 2.16 (3H, s)
- (iv) (S)-2-(4-((2-Amino-4-(1-hydroxypentan-2-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-methoxyphenyl)acetonitrile
(S)-2-Aminopentan-1-ol (0.136g) was added to a solution of the product from step (iii)
in NMP (2mL) . The resulting mixture was stirred at 140°C for 50h then diluted with
EtOAc and washed with saturated NaHCO3 solution and saturated brine. The organic phase was dried, filtered and evaporated.
The crude product was purified by column chromatography, elution gradient 5 to 10%
MeOH in DCM to give the subtitle compound, 0.095g.
1H NMR DMSO-d6: δ 6.98 (1H, s), 6.84 - 6.78 (2H, m), 4.62 (1H, t), 4.21 - 4.12 (1H, m), 3.97 (2H,
s), 3.86 (3H, s), 3.65 (2H, s), 3.41 - 3.33 (2H, m), 2.06 (3H, s), 1.55 - 1.41 (1H,
m), 1.35 - 1.21 (1H, m), 1.15 - 1.00 (2H, m), 0.78 (3H, t)
- (v) (S)-2-(4-((2-Amino-4-(1-hydroxypentan-2-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-methoxyphenyl)acetic
acid
A 5M aqueous solution of potassium hydroxide (0.5mL) was added to stirred solution
of the product from step (iv) (0.095g) in MeOH (1mL). The mixture was stirred at 70°C
for 15h and then the solvent was evaporated under reduced pressure. The resulting
aqueous solution was adjusted to pH ∼7 using concentrated HCl. The aqueous was extracted
with EtOAc and the combined organic phase was dried, filtered and evaporated to give
the subtitle compound, 0.09g.
1H NMR DMSO-d6: δ 6.87 (1H, s), 6.66 (2H, s), 5.65 (2H, s), 5.45 (1H, d), 4.13 - 4.05 (1H, m), 3.82
(3H, s), 3.58 (2H, s), 3.33 (2H, s), 3.42 - 3.34 (1H, m), 3.27 - 3.22 (1H, m), 3.17
- 3.11 (1H, m), 2.03 (3H, s), 1.53 - 1.41 (1H, m), 1.39 - 1.20 (1H, m), 1.20 - 1.05
(2H, m), 0.78 (3H, t)
- (vi) (S)-Methyl 2-(4-((2-amino-4-(1-hydroxypentan-2-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-methoxyphenyl)acetate
Concentrated sulfuric acid (0.3mL) was added to a solution of the product from step
(v) (0.09g) in MeOH (1mL). The solution was heated at 70°C for 3h and then poured
into saturated aqueous NaHCO3 solution (10mL). The aqueous was extracted with EtOAC and the combined organic phases
were dried, filtered and evaporated. The crude product was purified by RPHPLC to give
the title compound, 0.007g.
1H NMR DMSO-d6: δ 6.89 (1H, s), 6.74 - 6.69 (2H, m), 5.62 (2H, s), 5.44 (1H, d), 4.59 - 4.53 (1H,
m), 4.13 - 4.04 (1H, m), 3.84 (3H, s), 3.62 (2H, s), 3.59 (3H, s), 3.30 - 3.23 (4H,
m), 2.03 (3H, s), 1.52 - 1.41 (1H, m), 1.33 - 1.21 (1H, m), 1.17-0.99 (2H, m), 0.77
(3H, t) LC-MS m/z 403 multimode+
Example 31
(S)-Methyl 2-(4-((2-amino-4-(1-hydroxyheptan-3-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-methoxyphenyl)acetate
[0217]
- (i) (S)-2-(4-((2-Amino-4-(1-hydroxyheptan-3-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-methoxyphenyl)acetic
acid
(S)-3-Aminoheptan-1-ol (108 mg) was added to a suspension of the product from example
30 step (iii) (0.1g) in butan-1-ol (2mL). The resulting mixture was stirred at 180°C
for 3h in a CEM microwave. The mixture was then diluted with 5M aqueous potassium
hydroxide (0.5mL) and heated at 150°C for 3h in a CEM microwave. The mixture was adjusted
to ∼ pH 7 with conc. HCl and the organic phase was separated. The aqueous was extracted
with butan-1-ol and the combined organic phase was evaporated under reduced pressure
to give the subtitle compound, 0.124g.
1H NMR (DMSO-d6); δ 6.88 (1H, s), 6.70 (1H, d), 6.67 (1H, d), 5.90 (2H, s), 5.70 (1H,
d), 4.23 - 4.12 (1H, m), 3.83 (3H, s), 3.60 (2H, s), 3.46 (2H, s), 3.35 - 3.27 (2H,
m), 2.00 (3H, s), 1.65 - 1.52 (1H, m), 1.50 - 1.29 (3H, m), 1.27 - 0.97 (4H, m), 0.77
(3H, t)
- (ii) (S)-Methyl 2-(4-((2-amino-4-(1-hydroxyheptan-3-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-methoxyphenyl)acetate
Concentrated HCl (1mL) was added to a solution of of the product from step (i) (0.1
g) in MeOH (2mL). The mixture was heated at 70°C for 2h, poured into saturated aqueous
NaHCO3 solution (10mL) and the aqueous was adjusted to pH ∼7 by adding NaHCO3. The aqueous was extracted with EtOAc and the combined organic phase was dried, filtered
and evaporated. The crude product was purified by RPHPLC to give the title compound,
0.018g.
1H NM R DMSO-d6: δ 6.89 (1H, s), 6.71 (1H, d), 6.69 (1H, d), 5.66 (2H, s), 5.57 (1H, d), 4.37 (1H,
t), 4.21 - 4.11 (1H, m), 3.84 (3H, s), 3.62 (2H, s), 3.60 (2H, s), 3.59 (3H, s), 3.29
- 3.26 (2H, m), 2.00 (3H, s), 1.62 - 1.52 (1H, m), 1.48 - 1.30 (3H, m), 1.27 - 1.01
(4H, m), 0.77 (3H, t)
LC-MS m/z 431 multimode+
Example 32
(S)-Methyl 2-(4-((2-amino-4-(1-hydroxyhexan-2-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-methoxyphenyl)acetate
[0218]
- (i) (S)-2-(4-((2-Amino-4-(1-hydroxyhexan-2-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-methoxyphenyl)acetic
acid
(S)-2-aminohexan-1-ol (0.077g) was added to a suspension of the product from example
30 step (iii) (0.1g) in butan-1-ol (2mL). The resulting mixture was stirred at 180°C
for 2h in a CEM microwave. The mixture was then diluted with 5M aqueous potassium
hydroxide (0.5mL) and heated at 100°C for 15h. The mixture was adjusted to ∼ pH 7
with conc. HCl and the organic phase was separated. The aqueous was extracted with
butan-1-ol and the combined organic phase was evaporated under reduced pressure to
give the subtitle compound, 0.1g.
1H NMR DMSO-d6: δ 6.88 (1H, s), 6.69 (2H, s), 5.67 (2H, s), 5.45 (1H, d), 4.11 - 4.03 (1H, m), 3.83
(3H, s), 3.59 (2H, s), 3.43 (2H, s), 3.39 - 3.33 (1H, m), 3.28 - 3.22 (1H, m), 2.04
(3H, s), 1.58 - 1.46 (1H, m), 1.31 - 0.99 (3H, m), 0.90 - 0.82 (2H, m), 0.77 (3H,
t)
- (ii) (S)-Methyl 2-(4-((2-amino-4-(1-hydroxyhexan-2-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-methoxyphenyl)acetate
Concentrated hydrochloric acid (1mL) was added to a stirred solution of the product
from step (i) (0.1g) in MeOH (2mL) and the mixture was heated at 70°C for 2h. The
mixture was allowed to cool and then poured into saturated aqueous NaHCO3 solution (5mL). The mixture was adjusted to pH ∼7 by adding NaHCO3 and the aqueous was extracted with EtOAc. The combined organic phase was dried, filtered
and evaporated. The crude product was purified by RPHPLC to give the title compound,
0.014g.
1H NMR DMSO-d6: δ 6.89 (1H, s), 6.74 - 6.69 (2H, m), 5.62 (2H, s), 5.43 (1H, d), 4.56 (1H, t), 4.12
- 4.02 (1H, m), 3.84 (3H, s), 3.61 (2H, s), 3.59 (5H, s), 3.39 - 3.33 (1H, m), 3.29
- 3.22 (1H, m), 2.03 (3H, s), 1.58 - 1.47 (1H, m), 1.30 - 0.99 (5H, m), 0.76 (3H,
t)
LC-MS m/z 417 multimode+
Example 33
(S)-Methyl 2-(4-((2-amino-4-(1-hydroxyheptan-3-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-fluorophenyl)acetate
[0219]
- (i) (4-((2-Amino-4-chloro-6-methylpyrimidin-5-yl)methyl)-3-fluorophenyl)methanol
A solution of diisobutylaluminium hydride (1M in hexanes, 8.8mL) was added dropwise
over 10min to a suspension of the product from example 22 step (iii) (0.78g) in THF
(10mL) at 0 °C. The mixture was allowed to warm to rt and stirred for 1h. EtOAc (10mL)
was added and then the mixture stirred for 10min before being added to ice/water (100mL).
The mixture was stirred for 30min and then diluted with EtOAc (50mL). The organic
phase was separated and the aqueous was extracted with EtOAc. The combined organic
phase was dried, filtered and evaporated to afford the subtitle compound, 0.3g.
1H NMR (DMSO-d6); δ 7.11 (d, 1H), 7.04 (d, 1H), 6.89 (s, 1H), 6.84 (dd, 2H), 5.27 (t,
1H), 4.46 (d, 2H), 3.92 (s, 2H), 2.21 (s, 3H)
- (ii) 4-Chloro-5-(4-(chloromethyl)-2-fluorobenzyl)-6-methylpyrimidin-2-amine Thionyl
chloride (0.078mL) was added to a stirred solution of the product from step (i) (0.30g)
in DCM (5mL). The mixture was stirred at rt for 1h and then the solvent was evaporated
under reduced pressure. The crude product was purified by column chromatography to
give the subtitle compound, 0.13g.
1H NMR DMSO-d6: δ 7.29 (d, 1H), 7.19 (d, 1H), 6.96 - 6.87 (m, 3H), 4.73 (s, 2H), 3.94 (s, 2H), 2.22
(s, 3H)
- (iii) 2-(4-((2-Amino-4-chloro-6-methylpyrimidin-5-yl)methyl)-3-fluorophenyl) acetonitrile
Potassium cyanide (0.056g) was added to a stirred solution of the product from step
(ii) (0.13g) in DMSO (1mL) and DMF (1mL). The mixture was stirred at rt for 15h and
then diluted with EtOAc (10mL). The organic phase was washed with water and brine
then dried, filtered and evaporated to give the subtitle compound, 0.12g.
1H NMR DMSO-d6: δ 7.20 (d, 1H), 7.11 (d, 1H), 6.97 - 6.88 (m, 3H), 4.03 (s, 2H), 3.93 (s, 2H), 2.22
(s, 3H)
- (iv) (S)-2-(4-((2-Amino-4-(1-hydroxyheptan-3-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-fluorophenyl)acetonitrile
(S)-3-Aminoheptan-1-ol (0.135g) was added to a stirred solution of the product from
step (iii) (0.12g) in NMP (2mL). The mixture was heated at 150°C for 48h, and then
at 170°C for a further 8h. The mixture was allowed to cool, diluted with water (1
OmL) and the aqueous extracted with EtOAc. The combined organic phase was dried and
evaporated. The crude product was purified by column chromatography, to give the subtitle
compound, 0.11g.
1H NMR DMSO-d6: δ 7.17 (d, 1H), 7.05 (d, 1H), 6.86 (dd, 1H), 5.87 (s, 2H), 4.38 (t, 1H), 4.26 -
4.16 (m, 1H), 4.01 (s, 2H), 3.75 (s, 2H), 3.37 - 3.33 (m, 2H), 1.96 (s, 3H), 1.65
- 1.36 (m, 4H), 1.31 - 1.05 (m, 4H), 0.79 (t, 3H)
- (v) (S)-2-(4-((2-Amino-4-(1-hydroxyheptan-3-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-fluorophenyl)acetic
acid
A 5M aqueous solution of potassium hydroxide (0.58mL) was added to a stirred solution
of the product from step (iv) (0.11 g) in MeOH (1.5mL)). The mixture was heated at
70°C for 15h. The solvent was evaporated under reduced pressure and the aqueous residue
was adjusted to pH -7 with concentrated HCl. The aqueous was extracted with EtOAc
and the combined organic phase was dried, filtered and evaporated to the subtitle
compound, 0.102g.
1H NMR DMSO-d6: δ 7.03 (d, 1H), 6.87 (d, 1H), 6.75 - 6.68 (m, 1H), 5.78 - 5.66 (m, 3H), 4.25 - 4.14
(m, 1H), 3.82 - 3.70 (m, 2H), 3.69 (s, 2H), 3.58 (s, 2H), 3.45 - 3.37 (m, 2H), 1.96
(s, 3H), 1.62 - 1.53 (m, 1H), 1.51 - 1.37 (m, 3H), 1.30 - 1.08 (m, 4H), 0.80 (t, 3H)
- (vi) (S)-Methyl 2-(4-((2-amino-4-(1-hydroxyheptan-3-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-fluorophenyl)acetate
Concentrated sulfuric acid (0.3mL) was added to a stirred solution of the product
from step (v) (0.08g) in MeOH (1mL) and the mixture was heated to 70°C for 2h. The
mixture was allowed to cool, diluted with water (2mL) and neutralised with NaHCO3. The aqueous was extracted with EtOAc and the combined organic phase was dried and
evaporated. The crude product was purified by RPHPLC to give the title compound, 0.005g.
1H NMR DMSO-d6: δ 7.09 (d, 1H), 6.95 (d, 1H), 6.78 (dd, 1H), 5.83 (d, 1H), 5.71 (s, 2H), 4.39 (t,
1H), 4.25 - 4.15 (m, 1H), 3.72 (s, 2H), 3.66 (s, 2H), 3.60 (s, 3H), 3.37 - 3.33 (m,
2H), 1.95 (s, 3H), 1.65 - 1.54 (m, 2H), 1.53 - 1.35 (m, 2H), 1.30 - 1.04 (m, 4H),
0.79 (t, 3H)
LC-MS m/z 419 multimode+
Example 34
Methyl 2-(4-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl) acetate,
benzene sulphonic acid salt
[0220]
- (i) Ethyl 3-oxo-2-(4-((tetrahydro-2H-pyran-2-yloxy)methyl)benzyl)butanoate
Ethyl acetoacetate (1.7ml) was added to a stirred suspension of sodium hydride (60%
disp. in oil, 3.8g) in THF (200ml) at 0°C under nitrogen. After 1h, a solution of
2-(4-(chloromethyl)benzyloxy)tetrahydro-2H-pyran (22.2g) in THF (50ml) was added,
the mixture warmed to rt, then potassium iodide (16g) added and heated under reflux
for 48h. The mixture was partitioned between water and ether, the organics separated,
washed with water, dried and evaporated under reduced pressure. The residue was purified
by column chromatography eluting with 20% EtOAc in isohexane to afford the subtitle
compound, 15.66g.
LC-MS m/z 333 APCI-
- (ii) 2-Amino-6-methyl-5-(4-((tetrahydro-2H-pyran-2-yloxy)methyl)benzyl)pyrimidin-4-ol
A mixture of the product from step (i) (15.66g) and guanidine carbonate (8.7g) in
EtOH (150ml) was heated under reflux for 48h. The mixture was cooled, the solvent
removed under reduced pressure and the residue triturated with water. The solid was
filtered, washed with water then diethylether and dried to afford the subtitle compound,
11.58g.
1H NMR DMSO-d6: δ 7.18 (d, 2H); 7.14 (d, 2H) ; 4.64 (t, 1H) ; 4.61-4.35 (m, 2H) ; 3.81-3.75 (m,
1H) ; 3.62 (s, 2H) ; 3.48-3.43 (m, 1H) ; 1.96 (s, 3H) ; 1.74-1.60 (m, 2H) ; 1.53-1.43
(m, 4H)
LC-MS m/z 330 APCI+
- (iii) 2-Amino-6-methyl-5-(4-((tetrahydro-2H-pyran-2-yloxy)methyl)benzyl)pyrimidin-4-yl
2,4,6-trimethylbenzenesulfonate
2-Mesitylenesulfonyl chloride (3.65g) was added to a stirred mixture of the product
from step (ii) (5g), TEA (4.2ml) and DMAP (0.2g) in DCM (100ml) at rt under nitrogen.
The mixture was stirred at rt for 4h then partitioned between DCM and water. The organics
were separated, washed with aq NaHCO3 soln, water, dried and evaporated under reduced pressure to afford the subtitle compound,
6.49g.
LC-MS m/z 512 APCI+
- (iv) 6-Methyl-N4-pentyl-5-(4-((tetrahydro-2H-pyran-2-yloxy)methyl)benzyl)pyrimidine-2,4-diamine
A mixture of the product from step (iii) (6.49g) and n-pentylamine (7.34ml) in 1-butanol
was heated under reflux for 24h. The solvent was evaporated and the residue partitioned
between EtOAc and water. The organics were separated, dried and evaporated under reduced
pressure. The residue was purified by column chromatography eluting with 8% MeOH/DCM
to afford the subtitle compound, 3.4g.
LC-MS m/z 399 APCI+
- (v) (4-((2-Amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl)methanol
2M HCl (10ml) was added to a stirred solution of the product from step (iv) (3.4g)
in MeOH (30ml). The mixture was stirred at rt for 3 days then the solvent evaporated
under reduced pressure. The residue was partitioned between DCM/aq NaHCO3 solution, the organics separated, dried and evaporated under reduced pressure to
afford the subtitle compound, 2.38g.
LC-MS m/z 315 APCI+
- (vi) 5-(4-(Chloromethyl)benzyl)-6-methyl-N4-pentylpyrimidine-2,4-diamine
Thionyl chloride (1ml) was added to a mixture of the product from step (v) (1.2g)
in DCM (20ml) and stirred at rt for 2h. The solvent was evaporated under reduced pressure
and the residue used crude in the next step.
- (vii) 2-(4-((2-Amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl)acetonitrile
Potassium cyanide (0.75g) was added to a solution of the crude product from step (vi)
in DMSO (10ml) and DMF (10ml). The mixture was stirred at rt for 18h, then partitioned
between EtOAc/water. The organics were separated, washed with aq NaHCO3 solution, dried and evaporated under reduced pressure to afford the subtitle compound,
1.2g.
LC-MS m/z 324 APCI+
- (viii) 2-(4-((2-Amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl)acetic
acid
A mixture of the product from step (vii) (1.2g) and KOH (5M in water, 5ml) in MeOH
(15ml) was heated under reflux for 18h. The solvent was evaporated under reduced pressure
and the residue dissolved in water (15ml). The solution was adjusted to pH7 with 2M
HCl then the solid filtered, washed with water then ether to afford the subtitle compound,
1.13g
LC-MS m/z 343 multimode+
- (ix) Methyl 2-(4-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl) acetate,
benzene sulphonic acid salt
2M HCl in ether (2ml) was added to a mixture of the product from step (viii) (0.1g)
in MeOH (5ml) and the mixture stirred at rt for 18h. The solvent was evaporated and
the residue purified by RPHPLC. The gum (0.06g) was dissolved in MeCN (2ml) then benzenesulphonic
acid (0.027g) added and the solvent evaporated under reduced pressure. The residue
was triturated with ether and filtered to afford the title compound, 0.069g.
1H NMR DMSO-d6: δ 11.87 (s, 1H) ; 7.93 (t, 1H) ; 7.62-7.59 (m, 2H) ; 7.41-7.25 (m, 4H) ; 7.18 (d,
2H) ; 7.09 (d, 2H) ; 3.82 (s, 2H) ; 3.63 (s, 2H) ; 3.59 (s, 3H) ; 3.39-3.34 (m, 2H)
; 2.18 (s, 3H); 1.51-1.44 (m, 2H) ; 1.27-1.07 (m, 4H); 0.81 (t, 3H)
LC-MS m/z 357 multimode+
Example 35
2-Morpholinoethyl 2-(4-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl)acetate,
benzene sulphonic acid salt
[0221]

[0222] A solution of T
3P (1.57M in THF, 0.28ml) was addded to a mixture of the product from example 34 step
(viii) (0.1g), 4-(2-hydroxyethyl)morpholine (0.06g), TEA (0.14ml) and DMAP (0.01g)
in DMF (5ml) and stirred at rt for 24h. The mixture was partitioned between DCM/water,
the organics separated, washed with aq NaHCO
3 soln, brine, dried and evaporated under reduced pressure. The residue was purified
by RPHPLC to give a gum, 0.06g. The gum was dissolved in MeCN (4ml) and benzene sulphonic
acid (0.021 g) was added, the solution evaporated under reduced pressure and the residue
triturated with ether/EtOAc and the solid filtered and dried to afford the title compound,
0.042g.
1H NMR DMSO-d
6: δ 11.85 (brs, 1H) ; 7.94 (brs, 1H) ; 7.60 (m, 2H) ; 7.40-7.26 (brm, 4H) ; 7.20 (d,
2H) ; 7.09 (d, 2H) ; 4.14 (s, 2H) ; 3.82 (s, 2H) ; 3.62 (s, 2H) ; 3.52 (s, 4H) ; 3.37-3.31
(m, 2H) ; 2.37 (brs, 4H) ; 1.50-1.45 (m, 2H) ; 1.26-1.11 (m, 4H) ; 0.81 (t, 3H)
LC-MS m/z 456 multimode+
Example 36
2-(Dimethylamino)ethyl 2-(4-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl)acetate
[0223]

[0224] A solution of T
3P (1.57M in THF, 0.42ml) was addded to a mixture of the product from example 34 step
(viii) (0.15g), N,N-dimethylethanolamine (0.08ml), TEA (0.3ml) and DMAP (0.02g) in
DMF (5ml) and stirred at rt for 24h. The mixture was partitioned between DCM/water,
the organics separated, washed with aq NaHCO
3 soln, brine, dried and evaporated under reduced pressure. The residue was purified
by RPHPLC, then the product dissolved in MeCN (10ml) and PS-TBD (0.1g) added and left
for 2h. The mixture was filtered, the solvent evaporated under reduced pressure and
the residue triturated with isohexane and filtered to afford the title compound, 0.034g.
1H NMR DMSO-d
6: δ 7.14 (d, 2H) ; 7.04 (d, 2H) ; 6.14 (t, 1H); 5.63 (s, 2H) ; 4.08 (t, 2H) ; 3.71
(s, 2H) ; 3.58 (s, 2H) ; 3.26-3.22 (m, 2H) ; 2.43 (t, 2H) ; 2.12 (s, 6H) ; 1.99 (s,
3H) ; 1.47-1.40 (m, 2H); 1.27-1.13 (m, 4H); 0.82 (t, 3H)
LC-MS m/z 414 multimode+
Example 37
3-(Dimethylamino)propyl 2-(4-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl)acetate
[0225]

[0226] The title compound was prepared using the same method as example 36.
1H NMR DMSO-d
6: δ 7.13 (s, 2H) ; 7.04 (s, 2H) ; 6.14 (t, 1H) ; 5.63 (s, 2H) ; 4.02 (t, 2H) ; 3.71
(s, 2H) ; 3.58 (s, 2H) ; 3.26-3.22 (m, 2H); 2.18 (t, 2H); 2.06 (s, 6H) ; 2.00 (s,
3H); 1.69-1.62 (m, 2H); 1.47-1.40 (m, 2H); 1.27-1.12 (m, 4H); 0.82 (t, 3H)
LC-MS m/z 428 multimode+
Example 38
2-(4-Methylpiperazin-1-yl)ethyl 2-(4-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl)acetate,
di benzene sulphonic acid
[0227]

[0228] The title compound was prepared using the same method as example 36.
The dibenzene sulphonic acid salt was prepared by dissolving the product (0.098g)
in MeCN (4ml) then benzene sulphonic acid (0.066g) was added and the solution evaporated
under reduced pressure to afford the title compound.
1H NMR DMSO-d
6 (broad spectra, major peaks reported): δ 11.89 (s, 1H) ; 9.31 (s, 1H) ; 7.95 (s,
1H) ; 7.61-7.30 (m, 12H) ; 7.19 (d, 2H) ; 7.10 (d, 2H) ; 4.15 (s, 2H) ; 3.82 (s, 2H)
; 3.63 (s, 2H) ; 3.37 (brs, 4H) ; 3.00 (brs, 4H) ; 2.79 (s, 3H) ; 2.18 (s, 3H) ; 1.49-1.45
(m, 2H) ; 1.23-1.07 (m, 4H) ; 0.81 (t, 3H)
LC-MS m/z 469 multimode+
Example 39
Methyl 2-(3-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)-4-hydroxyphenyl)acetate
[0229]
- (i) 2-Amino-4-chloro-6-(pentylamino)pyrimidine-5-carbaldehyde
A mixture of 2-amino-4,6-dichloropyrimidine-5-carbaldehyde (30g), pentylamine (18.5ml)
and TEA (22ml) in MeOH (600ml) were heated under reflux for 3h then partitioned between
EtOAc/water. The organics were separated, washed with water, dried and evaporated
under reduced pressure. The residue was triturated with ether/iso-hexane to afford
the subtitle compound, 20g.
LC-MS m/z 243/5 APCI+
- (ii) 2-Amino-4-methyl-6-(pentylamino)pyrimidine-5-carbaldehyde
A mixture of the product from step (i) (20g), tetramethyltin (20ml) and tetrakis(triphenylphosphine)palladium
(0) (2g) in DMF (200ml) was heated at 100°C for 16h then evaporated under reduced
pressure. The residue was partitioned between EtOAc/brine, the organics separated,
dried and evaporated under reduced pressure. The residue was purified by chromatography
on silica eluting with 50-60% EtOAc/isohexane to afford the subtitle compound, 14.4g.
LC-MS m/z 223 APCI+
- (iii) (2-Amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methanol
Sodium borohydride (0.6g) was added to a solution of the product from step (ii) (2g)
in MeOH (30ml) at 0-5°C. The mixture was warmed to rt, stirred for 3h then the solvent
evaporated under reduced pressure. The residue was partitioned between EtOAc and brine,
the organics separated, dried and evaporated under reduced pressure to afford the
subtitle compound, 1.78g.
1H NMR DMSO-d6: δ 6.14 (t, 1H) ; 5.73 (s, 2H) ; 4.64 (t, 1H) ; 4.30 (d, 2H) ; 3.30-3.25 (m, 2H)
; 2.10 (s, 3H) ; 1.54-1.47 (m, 2H) ; 1.34-1.24 (m, 4H) ; 0.87 (t, 3H)
- (iv) Methyl 2-(3-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)-4-hydroxyphenyl)acetate
A mixture of the product from step (iii) (1.5g) and 4-hydroxyphenylacetic acid (1.02g)
in water (35ml) and 2M HCl (5ml) was heated at 100°C for 48h , cooled and evaporated
under reduced pressure. The residue was azeotroped with toluene and the residue dissolved
in MeOH (20ml). Conc. HCl (1ml) was added and the mixture stirred at rt for 4h then
evaporated under reduced pressure. The residue was partitioned between EtOAc/aq NaHCO3 soln, the organics separated, dried and evaporated under reduced pressure. The residue
was purified by column chromatography eluting with 8% MeOH/DCM to give a solid which
was then purified by RPHPLC to afford the title compound, 0.23g.
1H NMR DMSO-d6: δ 9.66 (s, 1H) ; 6.87 (d, 1H) ; 6.76 (d, 1H) ; 6.66 (s, 1H) ; 6.05 (brs, 1H) ; 5.61
(s, 2H) ; 3.56 (s, 2H) ; 3.54 (s, 3H) ; 3.43 (s, 2H) ; 3.25-3.20 (m, 2H) ; 2.07 (s,
3H) ; 1.48-1.40 (m, 2H) ; 1.28-1.14 (m, 4H) ; 0.83 (t, 3H)
LC-MS m/z 373 multimode+
Example 40
Methyl 2-(4-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)-3-methoxyphen
oxy)acetate
[0230]
- (i) Ethyl 2-(4-(benzyloxy)-2-methoxybenzylidene)-3-oxobutanoate
A solution of 4-(benzyloxy)-2-methoxybenzaldehyde (28.3g), ethyl acetoacetate (18ml),
acetic acid (1.74ml) and piperidine (0.56ml) in toluene (400ml) was heated under reflux
for 48h. A solution of acetic acid (1.74ml) and piperidine (0.56ml) in toluene (10ml)
was added and the solution heated under reflux for a further 48h. The solvent was
evaporated under reduced pressure and the residue partitioned between EtOAc and brine.
The organics were separated, washed with aq NaHCO3 soln, 1M HCl, brine, dried and evaporated under reduced pressure to give the subtitle
compound, 40g (used crude in next step).
- (ii) Ethyl 2-(4-hydroxy-2-methoxybenzyl)-3-oxobutanoate
A mixture of the product from step (i) (40g) and 5% Pd-C (3g) in EtOAc were hydrogenated
at 3Bar for 48h. The mixture was filtered through celite and evaporated under reduced
pressure. The residue was purified by column chromatography eluting with 30% EtOAc/iso-hexane
to afford the subtitle compound, 23.35g.
LC-MS m/z 265 APCI-
- (iii) 2-Amino-5-(4-hydroxy-2-methoxybenzyl)-6-methylpyrimidin-4-ol
A mixture of the product from step (ii) (23.35g) and guanidine carbonate (15.9g) in
EtOH (300ml) was heated under reflux for 24h. The mixture was cooled and the solid
filtered and washed with EtOH, water, EtOH then diethyl ether and dried to afford
the subtitle compound, 11.36g.
1H NMR DMSO-d6: δ 9.10 (s, 1H); 6.61 (d, 1H); 6.35 (s, 1H); 6.27 (s, 2H) ; 6.20 (d, 1H) ; 3.74 (s,
3H) ; 3.42 (s, 2H) ; 1.92 (s, 3H)
- (iv) 4-((2-Amino-4-(mesitylsulfonyloxy)-6-methylpyrimidin-5-yl)methyl)-3-methoxyphenyl
2,4,6-trimethylbenzenesulfonate
2-Mesitylenesulfonyl chloride (5.25g) was added to a mixture of the product from step
(iii) (5g), TEA (7ml) and DMAP (120mg) in DCM (100ml) and stirred at rt for 24h. DMF
(10ml) was added and the mixture heated under reflux for 12h. Another portion of 2-mesitylenesulfonyl
chloride (2g) was added and heated under reflux for a further 24h. The mixture was
partitioned between DCM/water, the organics separated, washed with aq NaHCO3 soln, brine, dried and evaporated under reduced pressure. The residue was triturated
with ether/isohexane and filtered to afford the subtitle compound, 9.515g.
LC-MS m/z 626 APCI+
- (v) 4-((2-Amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)-3-methoxyphenol
A mixture of the product from step (iv) (9.51g) and pentylamine (12ml) in dioxane
(100ml) was heated under reflux for 48h. The solvent was evaporated and the residue
partitioned between EtOAc/water. The organics were separated, washed with aq NaHCO3 soln, water, dried and evaporated under reduced pressure. The residue was dissolved
in MeOH (200ml) then aq NaOH (2M, 40ml) added and the mixture heated under reflux
for 6h. The mixture was acidified to pH 7 with aq 2M HCl, the solvent evaporated under
reduced pressure and the residue partitioned between DCM/water. The organics were
separated, washed with aq NaHCO3 soln, brine, dried and evaporated under reduced pressure. The residue was triturated
with ethyl acetate and filtered to afford the subtitle compound, 2.43g.
1H NMR DMSO-d6: δ 9.24 (s, 1H); 6.56-6.54 (m, 2H) ; 6.43 (s, 1H) ; 6.29 (s, 2H) ; 6.23 (d, 1H) ;
3.78 (s, 3H) ; 3.51 (s, 2H) ; 3.27 (q, 2H) ; 2.04 (s, 3H) ; 1.48-1.40 (m, 2H) ; 1.29-1.11
(m, 4H) ; 0.83 (t, 3H)
LC-MS m/z 331 APCI+
- (vi) Methyl 2-(4-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)-3-methoxyphenoxy)acetate
Methyl bromoacetate (57ul) was added to a mixture of the product from step (v) (0.2g)
and K2CO3 (0.251g) in DMF (10ml) and the mixture stirred at rt for 24h. The mixture was partitioned
between EtOAc/water, the organics separated, dried and evaporated under reduced pressure.
The residue was purified by RPHPLC to afford the title compound, 0.057g
1H NMR DMSO-d6: δ 6.60-6.58 (m, 2H) ; 6.35 (dd, 1H) ; 5.92 (t, 1H) ; 5.62 (s, 2H) ; 4.73 (s, 2H)
; 3.83 (s, 3H) ; 3.68 (s, 3H) ; 3.52 (s, 2H) ; 3.22 (m, 2H) ; 1.97 (s, 3H) ; 1.46-1.39
(m, 2H) ; 1.27-1.09 (m, 4H) ; 0.83 (t, 3H)
LC-MS m/z 403 multimode+
Example 41
Methyl 2-(4-((2-amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)phenyl) acetate,
benzene sulphonic acid
[0231]
- (i) 2-Amino-5-(4-(hydroxymethyl)benzyl)-6-methylpyrimidin-4-ol
Conc. HCl (4ml) was added to a mixture of the product from example 34 step (ii) (5.2g)
in MeOH (100ml) at rt and stirred for 30min. The solvent was evaporated under reduced
pressure and the residue dissolved in water (150ml). Aq sat. NaHCO3 soln was added until basic then the solid filtered, washed with water, ether and
dried to afford the subtitle compound, 3.48g.
LC-MS m/z 246 APCI+
- (ii) 2-Amino-5-(4-(chloromethyl)benzyl)-6-methylpyrimidin-4-ol, hydrochloride
Thionyl chloride (6ml) was added to a mixture of the product from step (i) (2.38g)
in DCM (80ml) and the mixture stirred at rt under nitrogen for 18h. The mixture was
evaporated under reduced pressure to afford the subtitle compound, used crude in next
step.
LC-MS m/z 264/266 APCI+
- (iii) 2-(4-((2-Amino-4-hydroxy-6-methylpyrimidin-5-yl)methyl)phenyl)acetonitrile
Potassium cyanide (2g) was added to a solution of the product from step (ii) in DMF
(20ml) and DMSO (10ml) and the mixture stirred at rt for 18h. The mixture was flushed
with nitrogen for 20min, then diluted with brine (80ml), stirred for 10min and the
precipitate filtered, washed with water then ether and dried to afford the subtitle
compound, 2.46g.
1H NMR DMSO-d6: δ 10.92 (s, 1H); 7.22-7.17 (m, 4H); 6.41 (s, 2H) ; 3.95 (s, 2H) ; 3.63 (s, 2H) ;
1.99 (s, 3H)
- (iv) 2-Amino-5-(4-(cyanomethyl)benzyl)-6-methylpyrimidin-4-yl 2,4,6-trimethylbenzenesulfonate
A mixture of the product from step (iii) (3.4g), 2-mesitylenesulfonyl chloride (3.51g),
TEA (5.59ml) and DMAP (82mg) was stirred at rt for 18h. The mixture was partitioned
between DCM/water, the organics separated, washed with aq. NaHCO3 soln, water, dried and evaporated under reduced pressure. The residue was triturated
with ether/ethylacetate and filtered to afford the subtitle compound, 5.08g.
LC-MS m/z 437 APCI+
- (v) 2-(4-((2-Amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)phenyl) acetonitrile
A mixture of the product from step (iv) (0.3g) and butylamine (1ml) in 1,4-dioxane
(6ml) was sealed into a microwave tube and the reaction was performed in the CEM Microwave,
at 160°C and 100W for 1 h. The solvent was evaporated under reduced pressure and the
residue used crude in the next step.
- (vi) 2-(4-((2-Amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)phenyl)acetic acid
The product from step (v) in MeOH (10ml) and 5M KOH in water (3ml) was heated under
reflux for 18h. The mixture was neutralised with acetic acid then purified by RPHPLC
to afford the subtitle compound, 0.168g.
1H NMR DMSO-d6: δ 7.06 (d, 2H) ; 6.91 (d, 2H) ; 6.11 (t, 1H); 5.64 (s, 2H) ; 3.67 (s, 2H) ; 3.27-3.22
(m, 2H) ; 3.15 (s, 2H) ; 2.00 (s, 3H) ; 1.47-1.40 (m, 2H) ; 1.26-1.17 (m, 2H) ; 0.84
(t, 3H)
- (vii) Methyl 2-(4-((2-amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)phenyl) acetate,
benzene sulphonic acid
A mixture of the product from step (vi) (0.146g) and 4M HCl in dioxane (3ml) in MeOH
(7ml) was stirred at rt for 18h. The solvent was evaporated and the residue purified
by RPHPLC to afford the ester, 0.098g. The ester was dissolved in MeCN (4ml) then
benzene sulphonic acid (0.045g) added. The solvent was evaporated to give a solid
which was triturated with ether and filtered to afford the title compound, 0.111g.
1H NMR DMSO-d6: δ 11.88 (s, 1H) ; 7.93 (t, 1H) ; 7.62-7.59 (m, 2H) ; 7.37-7.28 (m, 4H) ; 7.18 (d,
2H) ; 7.09 (d, 2H) ; 3.82 (s, 2H) ; 3.63 (s, 2H) ; 3.59 (s, 3H) ; 3.39-3.34 (m, 2H)
; 2.18 (s, 3H) ; 1.49-1.42 (m, 2H) ; 1.21-1.11 (m, 2H) ; 0.82 (t, 3H)
LC-MS m/z 343 multimode+
Example 42
(S)-Methyl 2-(3-((2-amino-4-(1-hydroxyhexan-3-ylamino)-6-methylpyrimidin-5-yl)methyl)-4-fluorophenyl)acetate
[0232]
- (i) Methyl4-fluoro-3-methylbenzoate
Thionyl chloride (5.68 ml) was added dropwise to a solution of 4-fluoro-3-methylbenzoic
acid (10 g) in MeOH (150 mL) at 0°C over a period of 10 minutes under nitrogen. The
resulting mixture was stirred at rt for 24h. The solvent was removed and the residue
diluted with EtOAc, washed with sat. NaHCO3, brine, dried, filtered and evaporated to afford the subtitle compound, 9.85 g.
LC-MS m/z 169 ESI
- (ii) Methyl 3-(bromomethyl)-4-fluorobenzoate
NBS (14.60 g) and AIBN (2.89 g) were added to a solution of the product from step
(i) (9.85 g) in EtOAc (200 mL). The resulting mixture was stirred at 80°C for 20h.
After cooling the mixture was washed with sat. sodium thiosulphate, brine, dried,
filtered and the solvent removed. The crude product was purified using chromatography,
to give the subtitle compound, 5.30 g.
LC-MS m/z 248 ESI
- (iii) Methyl 3-((2-amino-4-chloro-6-methylpyrimidin-5-yl)methyl)-4-fluorobenzoate
The subtitle compound was prepared using the product of step (ii) and the method of
example 22 steps (i)-(iii).
1H NMR DMSO-d6: δ 7.92 - 7.87 (m, 1H), 7.51 - 7.49 (m, 1H), 7.37 (dd,1H), 6.98 (s,
2H), 4.01 (s, 2H), 3.81 (s, 3H), 2.23 (s, 3H)
LC-MS m/z 310 ESI
- (iv) 2-(3-((2-Amino-4-chloro-6-methylpyrimidin-5-yl)methyl)-4-fluorophenyl)acetonitrile
The subtitle compound was prepared using the product of step (iii) and the method
of example 30 steps (i)- (iii).
1H NMR DMSO-d6: δ 7.27-7.20 (m, 2H), 6.95-6.87 (m, 3H), 3.97 (s, 2H), 3.95 (s, 2H),
2.22 (s, 3H)
LC-MS m/z 291 ESI.
- (v) (S)-2-(3-((2-Amino-4-(1-hydroxyhexan-3-ylamino)-6-methylpyrimidin-5-yl)methyl)-4-fluorophenyl)acetonitrile
(S)-3-Aminohexan-1-ol (101mg) was added to a stirred solution of the product from
step (iv) (100mg) in butan-1-ol (2mL). The reaction was performed in a microwave,
at 180°C for 2h. The solvent was removed and the crude product was purified using
chromatography, to give the subtitle compound, 70mg.
1H NMR DMSO d-6: δ 6.99 (s, 1H), 6.93 - 6.77 (m, 5H), 4.70 (t, 1H), 4.26 - 4.17 (m,
1H), 3.98 (s, 2H), 3.86 (s, 3H), 3.69 (s, 2H), 3.43-3.33 (m, 2H), 2.12 (s, 3H), 1.39-1.27
(m, 2H), 1.15-1.03 (m, 2H), 0.79 (t, 3H)
LC-MS m/z 370 ESI
- (vi) (S)-Methyl 2-(3-((2-amino-4-(1-hydroxyhexan-3-ylamino)-6-methylpyrimidin-5-yl)methyl)-4-fluorophenyl)acetate
Aq. 5M KOH (0.5mL) was added to a stirred solution of the product from step (v) (70mg)
in butan-1-ol (1mL) and heated to 100°C for 15h. The mixture was allowed to cool,
diluted with water (2mL) and then adjusted to ∼ pH 7 with conc. HCl. The organic phase
was separated and the aqueous was extracted with butan-1-ol (5 mL). The combined organic
extracts were evaporated, the residue was dissolved in MeOH and conc. HCl (0.3 mL)
was added and the mixture heated to 70°C for 1h. After cooling the reaction was poured
into sat. NaHCO3 (10 mL) and extracted with EtOAc, dried and the solvent removed. The crude product
was purified by RPHPLC to afford the title compound as a colourless gum, 22mg. 1H NMR DMSO d-6: δ 7.12 - 7.06 (m, 2H), 6.76 (d, 1H), 5.83 (d, 1H), 5.72 (s, 2H), 4.38
(t, 1H), 4.30 - 4.17 (m, 1H), 3.73 (s, 2H), 3.58 - 3.51 (m, 5H), 3.39 - 3.34 (m, 2H),
1.95 (s, 3H), 1.68 - 1.33 (m, 4H), 1.30 - 1.11 (m, 2H), 0.80 (t, 3H)
LC-MS m/z 405 multimode+
Example 43
(S)-Methyl 2-(4-((2-amino-4-(1-hydroxypentan-2-ylamino)-6-methylpyrimidin-5-yl)methyl)phenyl)acetate,
benzenesulphonic acid salt
[0233]
- (i) (S)-2-(4-((2-Amino-4-(1-hydroxypentan-2-ylamino)-6-methylpyrimidin-5-yl)methyl)phenyl)acetonitrile
To the product from example 41 step (iv) (300mg) in butanol (2ml), (S)-(+)-2-amino-1-pentanol
(213mg) was added and the reaction mixture heated in a microwave, at 180°C for 2h.
The solvent was evaporated under reduced pressure and the crude product was purified
using chromatography, to give the subtitle compound, 150mg.
1H NMR DMSO d-6: δ 7.26 (, 2H), 7.20 - 7.15 (m, 2H), 6.74 (s, 2H), 6.29 (s, 1H), 4.67
(t, 1H), 4.25 - 4.16 (m, 1H), 3.95 (s, 2H), 3.87 (d, 1H), 3.79 (d, 1H), 3.44 - 3.33
(m, 2H), 2.17 (s, 3H), 1.56-1.46 (m, 1H), 1.40-1.28 (m, 1H), 1.12-1.00 (m, 2H), 0.78
(t, 3H) LC-MS m/z 340 ESI
- (ii) (S)-2-(4-((2-Amino-4-(1-hydroxypentan-2-ylamino)-6-methylpyrimidin-5-yl)methyl)phenyl)acetic
acid
Aq. 5M KOH (1 ml) was added to a stirred solution of the product from step (i) (0.15
g) in butan-1-ol (2 mL). The mixture was heated at 100°C for 15h and then allowed
to cool. The pH was adjusted to - 7 using conc. HCl and the organic phase was separated.
The aqueous was extracted with butanol (5mL) and then the combined organics were evaporated
under reduced pressure. The crude product was purified by RPHPLC to afford the subtitle
compound as a colorless solid, 0.041 g.
LC-MS m/z 359 multimode+
- (iii) (S)-Methyl 2-(4-((2-amino-4-(1-hydroxypentan-2-ylamino)-6-methylpyrimidin-5-yl)methyl)phenyl)acetate,
benzenesulphonic acid salt
Conc. HCl (0.5mL) was added to a stirred solution of the product from step (ii) (40mg)
in MeOH (1mL) and the mixture heated at 70°C for 2h. The mixture was poured into sat
aq NaHCO3 (5mL) and then adjusted to pH ∼ 7 with solid sodium bicarbonate. The aqueous was
extracted with EtOAc and the combined organics were dried, filtered and evaporated
under reduced pressure. The crude product was purified by RPHPLC to give a gum. The
salt was formed as in example 41 step (vii) to give a white solid, 12mg.
1H NMR DMSO d-6: δ 11.83 (s, 1H), 7.61 - 7.56 (m, 1H), 7.41 - 7.24 (m, 4H), 7.18 (d,
2H), 7.11 (d, 2H), 4.79 - 4.67 (m, 1H), 4.33 - 4.21 (m, 1H), 3.90 (d, 1H), 3.81 (d,
1H), 3.63 (s, 2H), 3.59 (s, 3H), 3.43-3.37 (m, 2H), 2.19 (s, 3H), 1.59-1.20 (m, 2H),
1.13 - 1.0.1 (m, 2H), 0.78 (t, 3H)
LC-MS m/z 373 multimode+
Example 44
(S)-Methyl 2-(4-((2-amino-4-(1-hydroxyhexan-2-ylamino)-6-methylpyrimidin-5-yl)methyl)phenyl)acetate,
benzene sulphonic acid salt
[0234]

[0235] The title compound was prepared by the method of example 43 using (S)-2-amino-1-hexanol.
The salt was formed as in example 41 step (vii) to give a white solid, 15mg.
1H NMR DMSO d-6: δ 7.24 (d, 2H), 7.15 (d, 2H), 6.23 - 6.02 (m, 3H), 4.61 (t, 1H), 4.17-4.05
(m, 1H), 3.97 (s, 2H), 3.82 (d
" 1H), 3.75 (d
" 1H), 3.43 - 3.35 (m, 2H), 2.07 (s, 3H), 1.60 - 1.48 (m, 1H), 1.37 - 0.97 (m, 5H),
0.77 (t, 3H)
LC-MS m/z 387 multimode+
Example 45
(S)-Methyl 2-(4-((2-amino-4-(1-hydroxyhexan-3-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-fluorophenyl)acetate
[0236]

[0237] The title compound was prepared by the method of example 33 using (S)-3-aminohexan-1-ol
to give a white solid, 102mg.
1H NMR DMSOd-6: δ 7.08 (dd" 1H), 6.95 (dd, 1H), 6.78 (dd, 1H), 5.83 (d, 1H), 5.71 (s,
2H), 4.39 (t, 1H), 4.28 - 4.17 (m, 1H), 3.72 (s, 2H), 3.66 (s, 2H), 3.60 (s, 3H),
3.36 - 3.32 (m, 2H), 1.94 (s, 3H), 1.65 - 1.54 (m, 1H), 1:53 - 1.32 (m, 3H), 1.22
- 1.08 (m, 2H), 0.79 (t, 3H)
LC-MS m/z 405 multimode+
Example 46
Methyl 2-(4-((2-amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)-3-methoxyphenyl)acetate,
benzene sulphonic acid salt.
[0238]

[0239] The title compound was prepared by the method of example 30 using butylamine. The
salt was formed as in example 41 step (vii) to give a white solid, 140mg.
1H NMR DMSOd-6: δ 6.85 (s, 1H), 6.59 (d, 1H), 6.53 (d, 1H), 5.90 (t, 1H), 5.60 (s,
2H), 3.80 (s, 3H), 3.55 (s, 2H), 3.25 - 3.20 (m, 2H), 3.08 (s, 2H), 1.99 (s, 3H),
1.42 (q, 2H), 1.22 (sextet, 2H), 0.85 (t, 3H)
LC-MS m/z 373 multimode+
Example 47
(S)-Methyl 2-(4-((2-amino-4-(1-hydroxypentan-2-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-fluorophenyl)acetate,
benzene sulphonic acid salt
[0240]

[0241] The title compound was prepared by the method of example 33 and (S)-2-aminopentan-1-ol.
The salt was formed as in example 41 step (vii) to give a white solid, 34mg.
1H NMR DMSOd-6: δ 11.88 (s, 1H), 7.61 - 7.57 (m, 2H), 7.47 (d, 1H), 7.35 - 7.27 (m,
4H), 7.13 (dd, 1H), 7.00 (dd, 1H), 6.94 (dd, 1H), 4.72 (t, 1H), 4.35 - 4.25 (m, 1H),
3.85 (s, 2H), 3.69 (s, 2H), 3.60 (s, 3H), 3.44 - 3.35 (m, 2H), 2.12 (s, 3H), 1.59
- 1.46 (m, 1H), 1.44 - 1.32 (m, 1H), 1.28 - 1.06 (m, 2H), 0.80 (t, 3H)
LC-MS m/z 390 multimode+
Example 48
(S)-Methyl 2-(4-((2-amino-4-(1-hydroxyhexan-3-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-methoxyphenyl)acetate,
benzene sulphonic acid salt
[0242]

[0243] The title compound was prepared by the method of example 30 using (S)-3-aminohexan-1-ol.
The salt was formed as in example 41 step (vii) to give a white solid, 76mg.
1H NMR DMSOd-6: δ 11.82 (s, 1H), 7.61 - 7.58 (m, 2H), 7.37 (d, 1H), 7.34 - 7.26 (m,
5H), 6.93 (s, 1H), 6.78-6.74 (m, 2H), 4.42-4.32 (m, 1H), 3.84 (s, 3H), 3.69 (s, 2H),
3.65 (s, 2H), 3.60 (s, 3H), 3.36-3.27 (m, 2H), 2.13 (s, 3H), 1.65 - 1.59 (m, 2H),
1.48 - 1.39 (m, 2H), 1.19 - 1.05 (m, 2H), 0.80 (t, 3H)
LC-MS m/z 417 multimode+
Example 49
(S)-Methyl 2-(4-((2-amino-4-(1-hydroxyhexan-3-ylamino)-6-methylpyrimidin-5-yl)methyl)phenyl)acetate,
benzene sulphonic acid salt
[0244]

[0245] The title compound was prepared by the method of example 43 using (S)-3-aminohexan-1-ol.
The salt was formed as in example 41 step (vii) to give a white solid, 56mg.
1H NMR DMSOd-6: δ 7.61 - 7.56 (m, 1H), 7.33 - 7.27 (m, 2H), 7.17 (d, 2H), 7.08 (d,
2H), 4.40 - 4.23 (m, 2H), 3.84 - 3.75 (m, 2H), 3.65 - 3.55 (m, 5H), 2.11 (s, 3H),
2.05 - 1.93 (m, 1H), 1.64 - 1.54 (m, 2H), 1.47 - 1.36 (m, 2H), 1.13 - 1.02 (m, 2H),
0.77 (t, 3H)
LC-MS m/z 387 multimode+
Example 50
(S)-Methyl 2-(4-((2-amino-4-(1-hydroxyheptan-3-ylamino)-6-methylpyrimidin-5-yl)methyl)phenyl)acetate,
benzene sulphonic acid salt
[0246]

[0247] The title compound was prepared by the method of example 43 using (S)-3-aminoheptan-1-ol.
The salt was formed as in example 41 step (vii) to give a white solid, 51 mg.
1H NMR DMSOd-6: δ11.86 - 11.78 (m, 1H), 7.61 - 7.57 (m, 2H), 7.33 - 7.27 (m, 3H), 7.18
(d, 2H), 7.09 (d, 2H), 4.39 - 4.28 (m, 2H), 3.87 - 3.80 (m, 2H), 3.61 (d, 5H), 2.17
(s, 3H), 2.05-1.94 (m, 1H), 1.67 - 1.59 (m, 2H), 1.50 - 1.39 (m, 2H), 1.26 - 1.10
(m, 3H), 1.07-0.99 (m, 2H), 0.77 (t, 3H)
LC-MS m/z 401 multimode +
Example 51
Methyl 2-(4-((N-(3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propyl)-1-methylpiperidine-4-carboxamido)methyl)phenyl)acetate,
benzene sulphonic acid salt
[0248]

[0249] To the product of example 2 (50mg) in DMF (4ml) and TEA (0.118ml), 1-methylpiperidine-4-carboxylic
acid hydrochloride (23.89 mg) was added followed by T3P (1.57M in THF, 0.092 ml).
The reaction mixture was stirred for 1h. The solvents were evaporated, the crude product
was purified by RPHPLC. The resulting gum was dissolved in MeCN, benzenesulfonic acid
was added and the solvent removed to give the title compound as a white solid, 15mg.
1H NMR DMSO d-6 δ 7.65 - 7.59 (m, 1H), 7.32 - 7.18 (m, 5H), 7.16 - 7.08 (m, 2H), 4.60
- 4.42 (m, 2H), 3.66 - 3.57 (m, 5H), 3.41 - 3.23 (m, 4H), 2.40 - 2.16 (m, 9H), 2.11
(s, 3H), 1.82 - 1.43 (m, 9H), 1.35-1.18 (m, 5H), 0.87 (t, 3H)
LC-MS m/z 539 multimode +
Example 52
Methyl 2-(4-((N-(3-(2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)propyl)-2-(methylthio)acetamido)methyl)phenyl)acetate
[0250]

[0251] The title compound was prepared by the method of example 51 and 2-(methylthio)acetic
acid to give a gum, 27mg.
1H NMR DMSOd-6: δ7.32 - 7.11 (m, 4H), 6.27 - 6.13 (m, 1H), 5.60 - 5.45 (m, 2H), 4.64
- 4.44 (m, 2H), 3.76 - 3.55 (m, 5H), 3.44 - 3.37 (m, 2H), 2.34 - 2.20 (m, 3H), 2.18-1.97
(m, 8H), 1.66 - 1.41 (m, 4H), 1.35 - 1.20 (m, 5H), 0.86 (t, 3H)
LC-MS m/z 502 multimode +
Example 53
(S)-Methyl 2-(4-((2-amino-4-(2-hydroxybutylamino)-6-methylpyrimidin-5-yl)methyl)-3-methoxyphenyl)acetate,
benzene sulphonic acid salt
[0252]
- (i) (S)-2-(2-Hydroxybutyl)isoindoline-1,3-dione
To 1,2-Benzenedicarboximide (4.29g) in DMF (10ml), (S)-(-)-1,2-epoxybutane (2.1g)
was added followed by K2CO3 (4.03g) and heated at 60°C for 48h. The reaction was diluted with water, extracted
with EtOAc, dried and solvent removed to give the subtitle compound as a white solid,
1.8g.
LC-MS m/z 220 ESI
- (ii) (S)-1-Aminobutan-2-ol
To the product from step (i) (0.8g) in MeOH (30ml), hydrazine hydrate (60% in water,
0.6ml) was added and the mixture stirred at rt for 48h. The mixture was acidified
with acetic acid, filtered and solvent removed. The product was purified on SCX resin
to give the subtitle compound as a gum, 0.3 1 g.
1H NMR DMSOd-6: δ 5.54 - 5.28 (m, 3H), 3.45 - 3.32 (m, 1H), 2.52 - 2.39 (m, 2H), 1.46
- 1.20 (m, 2H), 0.85 (t 3H)
- (iii) (S)-2-(tert-Butyldimethylsilyloxy)butan-1-amine
To the product from step (ii) (310 mg,) in DMF (10 mL), tert-butylchlorodimethylsilane
(734 mg) was added followed by imidazole (474 mg) and stirred at rt for 24h. The mixture
was washed with water and extracted with EtOAc, dried and the solvent removed to give
the subtitle compound as a yellow oil, 610mg.
LC-MS m/z 204 ESI
- (iv) (S)-2-(4-((2-Amino-4-(2-hydroxybutylamino)-6-methylpyrimidin-5-yl)methyl)-3-methoxyphenyl)acetonitrile,
hydrochloride
The product of step (iii) (605mg) was added to the product of example 30 step (iii)
(300mg) in butan-1-ol (3 mL) and stirred at 180°C for 6 h in a microwave. The solvent
was removed and the residue dissolved in EtOAc washed with water, dried and solvent
removed. The product was purified using chromotagraphy to give the protected compound
(105 mg) as a white solid. (LC-MS m/z 470 ESI). This was dissolved in MeOH (5ml) and
2M HCl (1ml) was added and stirred overnight, the solvent was removed to give the
subtitle compound as a yellow gum, 80mg.
LC-MS m/z 356 ESI
- (v) (S)-Methyl 2-(4-((2-amino-4-(2-hydroxybutylamino)-6-methylpyrimidin-5-yl)methyl)-3-methoxyphenyl)acetate,
benzene sulphonic acid salt
The title compound was prepared using the product of step (iv) (80mg) and the method
of example 42 step (vi). The benzene sulphonic acid salt was prepared as a white solid,
15mg.
1H NMR DMSOd-6: δ 11.91 - 11.87 (m, 1H), 7.69 - 7.63 (m, 1H), 7.63 - 7.56 (m, 1H),
7.35 - 7.27 (m, 2H), 3.85 (s, 3H), 3.70 (s, 2H), 3.66 (s, 2H), 3.62 (s, 3H), 3.57
- 3.51 (m, 1H), 3.41-3.25 (m, 2H), 2.18 (s, 3H), 1.36-1.17 (m, 2H), 0.89 - 0.81 (m,
3H) LC-MS m/z 389 multimode +
Example 54
Methyl 2-(3-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)-4-methoxyphenyl)acetate
[0253]
- (i) 2-Amino-4-chloro-6-(pentylamino)pyrimidine-5-carbaldehyde
To 2-mmino-4,6-dichloropyrimidine-5-carbaldehyde (30g) in MeOH (600ml) and TEA (22ml),
pentylamine (18.5ml) was added and heated at reflux for 3h. The solvent was removed
and the residue partitioned between EtOAc and water, the organic layer was dried and
the solvent evaporated. The residue was triturated with ether/isohexane to give the
subtitle compound as a solid, 20.2g.
LC-MS m/z 243 APCI +
- (ii) 2-Amino-4-methyl-6-(pentylamino)pyrimidine-5-carbaldehyde
To the product from step (i) (20g) in DMF (200ml), Pd(PPh3)4 (2g) was added followed by SnMe4 (20ml) and the mixture heated at 100°C for 16h. The solvent was evaporated and the
residue partitoned between EtOAc and brine, the organics were dried and solvent removed.
The product was purified by silica chromatography to give the subtitle compound, 14.4g.
LC-MS m/z 233 APCI +
- (iii) (2-Amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methanol
To the product from step (ii) (4g) in MeOH (50ml), sodium borohydride (0.7g) was added
portionwise over 5min. The mixture was stirred at rt for 1h then the solvent removed
under reduced pressure. The residue was partitioned between EtOAc and water, the organics
were separated, dried and evaporated under reduced pressure to give the subtitle compound,
3.89g.
LC-MS m/z 225 APCI+
- (iv) 2-(3-((2-Amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)-4-methoxyphenyl)acetic
acid
To the product from step (iii) (0.8g) in 1M aq HCl (20ml), 4-methoxyphenylacetic acid
(1.8g) was added and heated under reflux for 48h. The solvent was evaporated and the
residue purified by SCX then by RPHPLC to give the subtitle compound, 164mg. LC-MS
m/z 373 APCI+
- (v) Methyl 2-(3-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)-4-methoxyphenyl)acetate
A solution of the product from step (iv) (135mg) in MeOH (5ml) and 4M HCl in dioxane
(0.5ml) was stirred at rt for 18h. The solvent was evaporated and the residue purified
by RPHPLC to give the title compound as a solid, 31mg.
1H NMR DMSO-d6: δ 7.05 (d, 1H), 6.93 (d, 1H), 6.65 (s, 1H), 5.97 (t, 1H), 3.84 (s,
3H) , 3.60 (s, 2H), 3.54 (s, 3H), 3.48 (s, 2H), 3.26-3.19 (m, 2H), 1.98 (s, 3H), 1.48-1.38
(m, 2H), 1.29-1.14 (m, 4H), 0.83 (t, 3H)
LC-MS m/z 387 multimode +
Example 55
3-(Dimethylamino)-2,2-dimethylpropyl 2-(4-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl)acetate,
benzene sulphonic acid salt
[0254]

[0255] The title compound was prepared using the method of example 35 and 3-(dimethylamino)-2,2-dimethylpropan-1-ol
to give a white solid, 65mg.
1H NMR DMSOd-6: δ 7.62 - 7.55 (m, 2H), 7.35 - 7.25 (m, 2H), 7.22 - 7.13 (m, 2H), 7.12-6.91
(m, 3H), 3.84 - 3.73 (m, 4H), 3.63 (s, 2H), 2.22 - 1.93 (m, 11H), 1.54 - 1.40 (m,
3H), 1.29 - 1.08 (m, 6H), 0.88 - 0.74 (m, 8H)
LC-MS m/z 456 multimode +
Example 56
3-(4-Methylpiperazin-1-yl)propyl 2-(4-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl)acetate,
benzene sulphonic acid salt
[0256]

[0257] The title compound was prepared using the method of example 35 and 3-(4-methylpiperazin-1-yl)propan-1-ol
to give a white solid, 63mg.
1H NMR DMSOd-6: δ 7.64 - 7.53 (m, 2H), 7.38 - 7.25 (m, 3H), 7.17 (d, 2H), 7.08 (d,
2H), 6.95 - 6.81 (m, 1H), 4.03 (t, , 2H), 3.79 (s, 2H), 3.59 (s, 2H), 3.48 - 3.36
(m, 2H), 3.36 - 3.27 (m, 4H), 2.65 - 2.54 (m, 2H), 2.40 - 2.28 (m, 6H), 2.13 (s, 3H),
1.75 - 1.65 (m, 2H), 1.51-1.41 (m, 2H), 1.28-1.17 (m, 3H), 1.16-1.05 (m, 2H), 0.81
(t, 3H) LC-MS m/z 483 multimode +
Example 57
4-(Dimethylamino)butyl 2-(4-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl)acetate,
bis benzene sulphonic acid salt
[0258]

[0259] The title compound was prepared using the method of example 35 and 4-dimethylamino-1-butanol
to give a foam, 131mg.
1H NMR DMSO-d6: δ 7.94-7.30 (m, 10H); 7.18 (d, 2H); 7.09 (d, 2H) ; 4.03 (s, 2H); 3.82
(s, 2H) ; 3.63 (s, 2H) ; 3.37-3.32 (m, 2H) ; 3.04-3.01 (m, 2H) ; 2.75 (s, 6H) ; 2.18
(s, 3H) ; 1.61-1.44 (m, 6H); 1.23-1.10 (m, 4H); 0.80 (t, 3H)
LC-MS m/z 442 multimode+
4-(Dimethylamino)butyl 2-(4-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl)acetate,
monosaccharin salt
[0260] To a stirred suspension of 4-(dimethylamino)butan-1-ol (1.54g), the product from
example 34 step (viii) (1.5g) and Hunig's base (2.295 mL) in DMF (30mL) was added
HATU (1.666g). After 4h a further portion of HATU (250mg) was added and stirring continued
for 2h. The solution was diluted with EtOAc and washed with brine, dried and concentrated
to give a brown oil, 2g. The crude product was purified by column chromatography eluting
with DCM; MeCN; Et
3N (90:10:10 to 70 :20:20) then by RPHPLC. The residue was dissolved in EtOAc, washed
with sat NaHCO
3 soln., dried and concentrated to give a clear oil 0.45g. The oil was dissolved in
MeCN and saccharin (0.18g) was added. Evaporation of the solvent gave a foam which
was triturated under ether for 60h to give a white solid which was collected, washed
with ether and dried in vacuo at 40°C, yield 0.5g.
1H NMR DMSO-d6: δ 7.66-7.56 (m, 4H), 7.2-7.18 (d, 2H), 7.17-7.06 (m 3H), 6.56 (s, 2H),
4.02 (t, 2H), 3.78 (s, 2H), 3.60 (s, 2H), 3.33-3.28 (m, 2H), 2.69-2.64 (m, 2H), 2.50
(s, 6H), 2.10 (s, 3H), 1.60-1.40 (m, 6H), 1.30-1.20 (m, 4H), 0.81 (t, 3H)
LC-MS m/z 442 multimode+
Example 58
3-Morpholinopropyl 2-(4-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl)acetate,
benzene sulphonic acid salt
[0261]

[0262] The title compound was prepared using the method of example 35 and 3-morpholinopropan-1-ol
to give a white solid, 115mg.
1H NMR DMSO-d6: δ 7.84 (s, 1H), 7.61-7.59 (m, 2H), 7.34-7.2 (m, 4H), 7.18 (d, 2H),
7.09 (d, 2H), 4.04 (t, 2H), 3.81 (s, 2H), 3.61 (s, 2H), 3.55 (brs, 4H), 3.38-3.33
(m, 2H), 2.33 (brs, 6H), 2.17 (s, 3H), 1.75-1.68 (m, 2H), 1.51-1.44 (m, 2H), 1.27-1.08
(m, 4H), 0.81 (t, 3H)
LC-MS m/z 470 multimode+
Example 59
1-Methylpiperidin-4-yl 2-(4-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl)acetate
[0263]

[0264] The title compound was prepared using the method of example 35 and 1-methylpiperidin-4-ol
to give a white solid, 25mg.
1H NMR DMSO-d6: δ 7.14 (d, 2H), 7.04 (d, 2H), 6.15 (t, 1H), 5.64 (s, 2H), 4.68-4.61
(m, 1H), 3.71 (s, 2H), 3.57 (s, 2H), 3.27-3.21 (m, 2H), 2.12 (s, 3H), 2.12-2.07 (m,
2H), 1.99 (s, 3H), 1.80-1.70 (brm, 2H), 1.59-1.39 (m, 4H), 1.27-1.13 (m, 4H), 0.82
(t, 3H)
LC-MS m/z 440 multimode+
Example 60
(1-Methylpiperidin-4-yl)methyl 2-(4-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl)acetate,
benzene sulphonic acid salt
[0265]

[0266] A solution of T
3P (1.57M in THF, 0.56ml) was addded to a mixture of the product from example 34 step
(viii) (0.15g), (1-methylpiperidin-4-yl)methanol (114mg) and TEA (0.3ml) in DMF (5ml)
and stirred at rt for 24h. The mixture was partitioned between DCM/water, the organics
separated, washed with aq NaHCO
3 soln, brine, dried and evaporated under reduced pressure. The residue was purified
by RPHPLC to give a gum, 100mg. The gum was dissolved in MeCN (5ml) then benzenesulphonic
acid (35mg) added and the solvent evaporated under reduced pressure. The residue was
triturated with ether and filtered, 103mg
1H NMR DMSO-d6: δ 7.61-7.59 (m, 2H); 7.34-7.28 (m, 3H); 7.16 (d, 2H); 7.08-7.06 (m,
3H) ; 6.54 (s, 2H) ; 3.90 (d, 2H); 3.77 (s, 2H) ; 3.62 (s, 2H) ; 3.33-3.27 (m, 2H);
3.07-3.04 (m, 2H) ; 2.45 (s, 3H) ; 2.45-2.34 (m, 2H) ; 2.09 (s, 3H) ; 1.71-1.65 (m,
3H) ; 1.50-1.42 (m, 2H) ; 1.33-1.09 (m, 6H) ; 0.82 (t, 3H)
LC-MS m/z 454 multimode+
Example 61
4-(Pyrrolidin-1-yl)butyl 2-(4-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl)acetate,
benzene sulphonic acid salt
[0267]

[0268] The title compound was prepared using the method of example 35 and 4-(pyrrolidin-1-yl)
butan-1-ol to give a white solid, 26mg.
1H NMR DMSOd-6: δ 7.59 (dd, 2H), 7.34 - 7.28 (m, 3H), 7.16 (d, 2H), 7.07 (d, 2H), 4.03
(t, 2H), 3.75 (s, 2H), 3.60 (s, 2H), 2.95 - 2.76 (m, 5H), 2.07 (d, 4H), 2.03 - 1.91
(m, 1H), 1.89-1.74 (m, 2H), 1.64-1.51 (m, 5H), 1.49-1.39 (m, 2H), 1.29-1.19 (m, 4H),
1.18 - 1.09 (m, 2H), 0.82 (t, 3H)
LC-MS m/z 468 multimode+
Example 62
(1-(2-Methoxyethyl)piperidin-4-yl)methyl 2-(4-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl)acetate,
bis benzene sulphonic acid salt
[0269]

[0270] The title compound was prepared using the method of example 35 and (1-(2-methoxyethyl)piperidin-4-yl)
methanol to give a foam, 168mg.
1H NMR DMSOd-6: δ 11.94 (s, 1H), 9.12 (s, 1H), 7.95 (t, 1H), 7.60 (d, 4H), 7.43 (brs,
2H), 7.34-7.27 (m, 6H), 7.19 (d, 2H), 7.10 (d, 2H), 3.90 (d, 2H), 3.82 (s, 2H), 3.66-3.61
(m, 4H), 3.49 (d, 2H), 3.39-3.33 (m, 2H), 3.31 (s, 3H), 3.27-3.18 (m, 2H), 2.98-2.89
(m, 2H), 2.18 (s, 3H), 1.89-1.78 (m, 3H), 1.52-1.42 (m, 4H), 1.25-1.07 (m, 4H), 0.81
(t, 3H) LC-MS m/z 498 multimode+
Example 63
4-(4-Methylpiperazin-1-yl)butyl 2-(4-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl)acetate,
benzene sulphonic acid salt
[0271]

[0272] The title compound was prepared using the method of example 35 and 4-(4-methylpiperazin-1-yl)butan-1-ol
to give a white solid, 151mg.
1H NMR DMSOd-6: δ 7.62 - 7.57 (m, 2H), 7.33 - 7.28 (m, 3H), 7.16 (d, 2H), 7.07 (d,
2H), 4.01 (t, 2H), 3.77 (s, 2H), 3.60 (s, 2H), 2.34 - 2.28 (m, 2H), 2.11 (s, 3H),
2.07 (s, 2H), 2.05 - 1.95 (m, 1H), 1.61-1.50 (m, 2H), 1.50 - 1.37 (m, 4H), 1.27-1.18
(m, 4H), 1.17-1.09 (m, 2H), 0.81 (t,, 3H)
LC-MS m/z 497 multimode+
Example 64
4-(1,1-Dioxidothiomorpholin-4-yl)butyl(4-{[2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl]methyl}phenyl)acetate,
benzene sulphonic acid salt
[0273]

[0274] The title compound was prepared using the method of example 35 and 4-(4-hydroxybutyl)thiomorpholine1,1-dioxide
to give a white solid, 98mg.
1H NMR DMSOd-6: δ 7.95 - 7.88 (m, 1H), 7.60 - 7.56 (m, 2H), 7.33 - 7.29 (m, 3H), 7.20
- 7.16 (m, 2H), 7.12 - 7.07 (m, 2H), 4.06 - 3.99 (m, 2H), 3.82 (s, 2H), 3.61 (s, 2H),
3.40 - 3.34 (m, 1H), 3.09 - 3.02 (m, 4H), 2.85 - 2.79 (m, 4H), 2.46 - 2.39 (m, 2H),
2.19 (s, 3H), 1.59-1.50 (m, 1H), 1.50-1.36 (m, 4H), 1.26 - 1.17 (m, 2H), 1.15 - 1.06
(m, 2H), 0.81 (t, 3H)
LC-MS m/z 532 multimode+
Example 65
4-Morpholinobutyl 2-(4-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl)acetate,
benzene sulphonic acid salt
[0275]

[0276] The title compound was prepared using the method of example 35 and 4-morpholinobutan-1-ol
to give a white solid, 30mg.
1H NMR DMSOd-6: δ 7.60 - 7.55 (m, 2H), 7.33 - 7.28 (m, 3H), 7.19 - 7.14 (m, 2H), 7.09
- 7.04 (m, 2H), 4.02 (t, 2H), 3.77 (s, 2H), 3.62 - 3.51 (m, 5H), 3.31 (2H, m) 2.35
- 2.20 (m, 6H), 2.11 (s, 3H), 1.59 - 1.51 (m, 2H), 1.50 - 1.36 (m, 4H), 1.27 - 1.17
(m, 3H), 1.17-1.07 (m, 2H), 0.81 (t, 3H)
LC-MS m/z 484 multimode+
Example 66
2-(1-Methylpiperidin-4-yl)ethyl 2-(4-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl)acetate,
benzene sulphonic acid salt
[0277]

[0278] The title compound was prepared using the method of example 35 and 2-(1-methylpiperidin-4-yl)
ethanol to give a gum, 90mg.
1H NMR DMSOd-6: δ 7.61 - 7.58 (m, 2H), 7.34 - 7.28 (m, 3H), 7.15 (d, 2H), 7.07 (d,
2H), 6.40 (s, 1H), 4.05 (t, 2H), 3.76 (s, 2H), 3.59 (s, 2H), 3.32-3.27 (m, 2H), 3.13
- 3.05 (m, 2H), 2.54 - 2.50 (m, 3H), 2.08 (s, 3H), 1.73 - 1.67 (m, 2H), 1.53 - 1.37
(m, 6H), 1.29 - 1.05 (m, 7H), 0.82 (t, 3H)
LC-MS m/z 468 multimode+
Example 67
Piperidin-4-ylmethyl 2-(4-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl)acetate
[0279]
- (i) tert-Butyl 4-((2-(4-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl)acetoxy)methyl)piperidine-1-carboxylate
The subtitle compound was prepared using the method of example 60 and tert-butyl 4-(hydroxymethyl)piperidine-1-carboxylate
to give a crude solid, 237mg.
LCMS m/z 540 APCI +ve
- (ii) Piperidin-4-ylmethyl 2-(4-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl)acetate
To the product of step (i) (237mg) in DCM (7ml), TFA (2ml) was added and stirred at
rt for 7h. The solvent was removed and the crude product was partitioned between DCM
/NaHCO3 (aq), dried and evaporated under reduced pressure. The residue was purified by RPHPLC
to give a white solid, 54mg.
1H NMR DMSOd-6: δ 7.13 (d, 2H), 7.04 (d, 2H), 6.14 (t, 1H), 5.63 (s, 2H), 3.83 (d,
1H), 3.71 (s, 2H), 3.59 (s, 2H), 3.27-3.22 (m, 2H), 2.90-2.84 (m, 2H), 2.41-2.33 (m,
2H) , 1.99 (s, 3H), 1.66-1.55 (m, 1H), 1.51-1.40 (m, 4H), 1.27-0.95 (m, 6H), 0.82
(t, 3H) LC-MS m/z 440 multimode+
Example 68
4-(4-(Dimethylamino)piperidin-1-yl)butyl 2-(4-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl)acetate,
saccharin salt
[0280]

[0281] To the product from example 34 step (viii) (250mg) in DMF (7ml), 4-(4-(dimethylamino)piperidin-1-yl)butan-1-ol
(292mg) was added followed by Hunig's base and HATU (278mg) and stirred at rt for
3h. The product was then purified by RPHPLC, to give a gum (193mg), this was dissolved
in MeCN (6ml) then saccharin (67mg) was added and the solvent evaporated under reduced
pressure. The residue was triturated with ether, filtered and dried under high vac
to give the title compound as a white solid, 156mg.
1H NMR DMSOd-6: δ 7.66-7.55 (m, 4H), 7.16 (d, 2H), 7.07 (d, 2H), 6.88 (s, 1H), 6.38
(s, 2H), 4.02 (t, 2H), 3.76 (s, 2H), 3.60 (s, 2H), 3.32-3.27 (m, 2H), 2.95 (d, 2H),
2.68-2.60 (m, 1H), 2.33 (brs, 2H), 2.09 (s, 3H), 1.97 (brs, 2H), 1.84 (d, 2H), 1.57-1.39
(m, 8H), 1.26-1.09 (m, 4H), 0.81 (t, 3H)
LC-MS m/z 525 multimode+
Example 69
(1-Methylpiperidin-4-yl)methyl 2-(4-((2-amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)phenyl)acetate,
saccharin salt
[0282]

[0283] To the product from example 41 step (vi) (140mg) in DMF (5ml), (1-methylpiperidin-4-yl)methanol
(0.11g), DMAP (5mg) and TEA (0.2ml) were added followed by HATU (195mg). The mixture
was stirred for 18h then purified by RPHPLC to give a gum (75mg). The gum was dissolved
in MeCN (5ml), saccharin (31mg) added and the solvent evaporated under reduced pressure.
The residue was triturated with ether and the solid filtered and dried to give the
title compound, 80mg.
1H NMR DMSOd-6: δ 7.66-7.55 (m, 4H), 7.16 (d, 2H), 7.07 (d, 2H), 6.57 (s, 2H), 3.90
(d, 2H), 3.77 (s, 2H), 3.62 (s, 2H), 3.34-3.29 (m, 2H), 3.09-3.06 (m, 2H), 2.47 (s,
3H), 2.46-2.36 (m, 2H), 2.09 (s, 3H), 1.70-1.67 (m, 2H), 1.48-1.41 (m, 2H), 1.33-1.13
(m, 4H), 0.83 (t, 3H)
LC-MS m/z 440 multimode+
Example 70
(S)-4-(Dimethylamino)butyl 2-(4-((2-amino-4-(1-hydroxypentan-2-ylamino)-6-methylpyrimidin-5-yl)methyl)phenyl)acetate,
saccharin salt
[0284]
- (i) 2-(4-((2-Amino-4-chloro-6-methylpyrimidin-5-yl)methyl)phenyl)acetonitrile
The product from example 41 step (iii) (3.7g) and POCl3 (30ml) were heated at 100°C for 18h then evaporated under reduced pressure. The residue
was diluted with cold water, and neutralised with aq 5M NaOH soln. and heated at 50°C
for 2h. The subtitle compound was filtered, washed with water and dried under vacum
at 45°C, 1.81 g.
1H NMR DMSOd-6: δ 7.27 (d, 2H), 7.12 (d, 2H), 6.88 (s, 2H), 3.98 (s, 2H), 3.96 (s,
2H), 2.21 (s, 3H)
LC-MS m/z APCI +273
- (ii) (S)-2-(4-((2-Amino-4-(1-hydroxypentan-2-ylamino)-6-methylpyrimidin-5-yl)methyl)phenyl)acetic
acid
To the product of step (i) (0.4g) in butan-1-ol (3ml), (S)-(+)-2-amino-1-pentanol
(0.5g) was added and the reaction heated in a microwave, at 160°C at 100W for 1.5h.
After cooling, aq. 5M KOH (1ml) was added and the mixture heated at 100°C for 48h.
The mixture was cooled and the solvent evaporated under reduced pressure. The residue
was purified by RPHPLC to give the TFA salt, which was purified by SCX, eluting with
MeCN then 10%aq NH3/MeCN to give the subtitle compound, 174mg.
LC-MS m/z APCI +372
- (iii) (S)-4-(Dimethylamino)butyl 2-(4-((2-amino-4-(1-hydroxyhexan-3-ylamino)-6-methylpyrimidin-5-yl)methyl)phenyl)acetate,
1.75 saccharin salt
The title compound was prepared using the method of example 68 and the product of
step (ii) with 4-(dimethylamino)butan-1-ol, yield 145mg.
1H NMR DMSOd-6: δ 7.68-7.58 (m, 8H), 7.19 (d, 2H), 7.11 (d, 2H), 4.37-4.30 (m, 1H),
4.04 (t, 2H), 3.90-3.80 (m, 2H), 3.63 (s, 2H), 3.37-3.29 (m, 2H), 3.06-3.02 (m, 2H),
2.76 (s, 6H), 2.20 (s, 3H), 1.66-1.58 (m, 6H), 1.46-1.40 (m, 2H), 1.09-1.04 (m, 2H),
0.77 (t, 3H)
LC-MS m/z 458 multimode+
Example 71
(S)-(1-Methylpiperidin-4-yl)methyl 2-(4-((2-amino-4-(1-hydroxypentan-2-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-methoxyphenyl)acetate,
benzenesulfonic acid salt
[0285]

[0286] To the product from example 30 step (v) (100mg) in DMF (3ml), (1-methylpiperidin-4-yl)methanol
(90mg), TEA (0.17ml) and DMAP (6.3mg) were added, followed by T3P (1.57M in THF, 0.24ml)
and stirred at rt for 15h. The reaction was diluted with EtOAc (10 mL), washed with
water, dried, filtered and evaporated under reduced pressure. The crude product was
purified by RPHPLC to give the product as a gum, this was dissolved in MeCN (0.5 mL)
and benzenesulfonic acid (6.33 mg) was added and the solvent evaporated. The residue
was triturated with Et
2O to give the title compound as a white solid, 25 mg.
1H NMR DMSOd-6: δ 7.61 - 7.58 (m, 2H), 7.35 - 7.28 (m, 3H), 6.91 (s, 1H), 6.78 (d,
1H), 6.73 (d, 1H), 4.70 - 4.62 (m, 1H), 4.22 - 4.13 (m, 1H), 3.91 (d, 2H), 3.83 (s,
3H), 3.65 (s, 2H), 3.64 (s, 2H), 3.41 - 3.35 (m, 4H), 3.13 - 3.01 (m, 2H), 2.49 -
2.44 (m, 3H), 2.10 (s, 3H), 1.74 - 1.66 (m, 3H), 1.55 - 1.43 (m, 1H), 1.37 - 1.22
(m, 4H), 1.09 (t, 3H), 0.78 (t,3H)
LC-MS m/z 500 multimode+
Example 72
(1-Methylpiperidin-4-yl)methyl 2-(4-((2-amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)-3-methoxyphenyl)acetate,
bis benzenesulfonic acid salt
[0287]
- (i) 2-(4-((2-Amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)-3-methoxyphenyl)acetic
acid
To the product of example 30 step (iii) (400mg) in butan-1-ol (3ml), butylamine (0.39
mL) was added and the reaction heated in a microwave, at 180°C for 1h. The reaction
was repeated on an identical scale and the two batches were combined. Aq. 5M KOH (1ml)
was added and the mixture was heated at 100°C for 36h. After cooling, the solvent
was evaporated under reduced pressure. The residue was diluted with water (5 mL) and
the pH adjusted to ∼ 7 using conc. HCl. The resulting precipitate was collected by
filtration and the solid suspended in MeCN (10 mL) for 10min. The suspension was filtered
and the collected solid dried under vacuum to give to the subtitle compound as a white
solid, 560 mg.
1H NMR DMSOd-6: δ 6.88 (d, 1H), 6.70 (dd, 1.4 Hz, 2H), 6.64 (d, 2H), 6.23 - 6.18 (m,
1H), 5.91 (s, 1H), 3.83 (s, 3H), 3.59 (s, 2H), 3.49 (s, 2H), 3.27 - 3.21 (m, 8H),
1.98 (s, 3H), 1.42 (q, 2H), 1.25 - 1.16 (m, 3H), 0.84 (t, 3H)
LC-MS m/z 359 multimode+
- (ii) (1-Methylpiperidin-4-yl)methyl 2-(4-((2-amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)-3-methoxyphenyl)acetate,
bis benzenesulphonic acid salt
The title compound was prepared using the product from step (i) and the method of
example 71 to give a white solid, 35mg.
1H NMR DMSOd-6: δ 11.90 (s, 1H), 7.90 - 7.86 (m, 1H), 7.62 - 7.57 (m, 4H), 7.35-7.26
(m, 6H), 6.92 (s, 1H), 6.76 - 6.72 (m, 2H), 3.92 (d, 2H), 3.83 (s, 3H), 3.67 (s, 2H),
3.65 (s, 2H), 3.46 - 3.32 (m, 4H), 2.97 - 2.85 (m, 2H), 2.79 - 2.73 (m, 2H), 2.52
- 2.51 (m, 3H), 2.10 (s, 2H), 1.90 - 1.80 (m, 2H), 1.52 - 1.30 (m, 4H), 1.28 - 1.15
(m, 4H), 0.85 (t, 3H)
LC-MS m/z 470 multimode+
Example 73
4-(Pyrrolidin-1-yl)butyl 2-(4-((2-amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)-3-methoxyphenyl)acetate,
benzenesulphonic acid salt
[0288]

[0289] The title compound was prepared using the method of example 72 and 4-(pyrrolidin-1-yl)butan-1-ol
to give a gum, 64mg.
1H NMR DMSOd-6: δ 7.60 - 7.57 (m, 2H), 7.34 - 7.28 (m, 3H), 6.90 (s, 1H), 6.72 (d,
1H), 6.68 (d, 1H), 4.04 (t, 2H), 3.84 (s, 3H), 3.62 (s, 2H), 3.61 (s, 2H), 2.92 -
2.78 (m, 2H), 2.58 - 2.50 (m, 4H), 2.02 (s, 3H), 1.85 - 1.75 (m, 4H), 1.65 - 1.50
(m, 4H), 1.48 - 1.38 (m, 4H), 1.31 - 1.14 (m, 4H), 0.84 (t, 3H)
LC-MS m/z 484 multimode+
Example 74
(S)-(1-Methylpiperidin-4-yl)methyl 2-(4-((2-amino-4-(1-hydroxyhexan-3-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-fluorophenyl)acetate,
saccharin salt
[0290]
- (i) (S)-2-(4-((2-Amino-4-(1-hydroxyhexan-3-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-fluorophenyl)acetonitrile
(S)-3-Aminohexan-1-ol (0.966g) was added to a suspension of the product of example
33 step (iii) (1.2 g) in butan-1-ol (9 mL). The reaction was performed in the CEM
Microwave, at 180 °C for 2h. The solvent was evaporated under reduced pressure and
the crude product was purified by flash silica chromatography, to give the subtitle
compound as an orange solid, 0.98g.
1H NMR DMSO-d6: δ 7.17 (dd, 1H), 7.06 (dd, 1H), 6.87 (dd, 1H), 6.01 (d, 1H), 5.91 (s,
2H), 4.44 - 4.36 (m, 1H), 4.30 - 4.19 (m, 1H), 4.01 (s, 2H), 3.75 (s, 2H), 3.41 -
3.23 (m, 2H), 1.96 (s, 3H), 1.65 - 1.32 (m, 2H), 1.30 - 1.05 (m, 4H), 0.79 (t, 3H)
LC/MS m/z 372 APCI+
- (ii) (S)-2-(4-((2-Amino-4-(1-hydroxyhexan-3-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-fluorophenyl)acetic
acid
5M KOH (3 ml) was added to a stirred solution of the product from step (i) (0.98 g)
in butan-1-ol (3 mL). The solution was heated to 100°C for 15h and then allowed to
cool. The solvent was evaporated under reduced pressure and the residue was diluted
with water (5 mL). The pH was adjusted to -7 using conc. HCl and the aqueous was extracted
with DCM/MeOH (9: 1). The combined organics were evaporated to dryness. The aqueous
was also evaporated to dryness and the residue suspended in MeOH (10 mL). The solids
were removed by filtration and the filtrate was combined with the residues from the
organic extracts and evaporated to dryness to give the subtitle compound as a light
brown solid, 0.830 g.
1H NMR DMSO-d6: δ 7.13 - 6.93 (m, 5H), 6.90 - 6.82 (m, 1H), 4.41 - 4.24 (m, 1H), 3.80
(s, 2H), 3.55 (s, 2H), 3.41 - 3.29 (m, 2H), 2.07 (s, 3H), 1.67 - 1.54 (m, 1H), 1.48
- 1.07 (m, 5H), 0.81 (t, 3H)
LC/MS m/z 391 APCI+
- (iii) (S)-(1-Methylpiperidin-4-yl)methyl 2-(4-((2-amino-4-(1-hydroxyhexan-3-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-fluorophenyl)acetate,
saccharin salt.
To the product of step (ii) (157mg) in DCM (1.5ml)/DMF (1.5ml), TEA (0.067ml), DMAP
(4.9mg) and (1-methylpiperidin-4-yl)methanol (156mg) were added followed by HATU (183
mg) and then stirred at rt for 1h. The reaction was diluted with water (5 mL) and
DCM (5 mL). The organic phase was separated and evaporated under reduced pressure.
The crude product was purified by RPHPLC the resulting residue was diluted with methanol
(0.5 mL) and saccharin (12.82 mg) was added and the solvent evaporated. The residue
was triturated with diethyl ether (0.5 mL) to give the title compound as a colourless
foam, 45mg.
1H NMR DMSOd-6: δ 7.66 - 7.54 (m, 4H), 7.11 (dd, 1H), 6.98 (dd, 1H), 6.85 (dd, 1H),
4.42 - 4.25 (m, 2H), 3.92 (d, 2H), 3.78 (s, 2H), 3.68 (s, 2H), 3.44 - 3.33 (m, 2H),
3.18 - 3.03 (m, 4H), 2.52 - 2.52 (m, 3H), 2.02 (s, 3H), 1.77 - 1.66 (m, 4H), 1.65
- 1.50 (m, 2H), 1.49 - 1.38 (m, 1H), 1.36 - 1.21 (m, 2H), 1.21 - 1.11 (m, 2H), 0.80
(t, 3H)
LC-MS m/z 502 multimode+
Example 75
(S)-Methyl 2-(4-((2-amino-4-(1-hydroxyhexan-3-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-hydroxyphenyl)acetate
[0291]
- (i) Methyl2-(benzyloxy)-4-iodobenzoate
A mixture of methyl 2-hydroxy-4-iodobenzoate (22.8g), benzyl bromide (10.3ml) and
K2CO3 (22.67g) in DMF (200ml) was stirred at rt for 72h. The mixture was partitioned between
diethyl ether and water, the organics separated washed with water, dried and evaporated
under reduced pressure to give a white solid, 29.5g.
1H NMR CDCl3 : δ 7.54-7.30 (m, 8H), 5.14 (s, 2H), 3.88 (s, 3H)
LC-MS m/z 369 APCI +
- (ii) (2-(Benzyloxy)-4-iodophenyl)methanol
A solution of DIBAL-H (179 mL, 1M) was added to a solution of the product from step
(i) (26.4g) in THF (400ml) at rt. The mixture was stirred for 3h then a further 10ml
of DIBAL-H was added and stirred for a further 1h. The mixture was quenched carefully
with EtOAc and then with 2M aq HCl. The mixture was partitioned between ether/ 2M
HCl, the organics were separated, washed with water, dried and evaporated under reduced
pressure. The residue was triturated with isohexane and filtered to give the subtitle
compound as a solid, 21g.
LC-MS m/z 341 APCI +
- (iii) Methyl 3-(benzyloxy)-4-(hydroxymethyl)benzoate
To a solution of the product from step (ii) (21 g) in MeOH (150 mL), hunig's base
(53.9 ml), and dichloro[1,1'-bis(diphenylphosphino)ferrocene]palladium (II) dichloromethane
adduct (2.54 g) was added. The resulting mixture was stirred at 90°C for 16h under
carbon monoxide (4 bar) in a carbonylator. After cooling, the reaction mixture was
filtered through a filter disc, evaporated and purified using chromatography, to give
the subtitle compound as a white solid, 10 g.
LC-MS m/z 273 APCI +
- (iv) Methyl 3-(benzyloxy)-4-(chloromethyl)benzoate
The product of step (iii) (9.5 g) was dissolved in DCM (200ml), cooled to 0 °C and
thionyl chloride (3.57 ml) was added and stirred at rt for 2h. The solvents were evaporated
and the residue taken up in DCM and washed with aq. NaHCO3. The combined organics were dried, filtered and evaporated to give the subtitle compound
as a brown oil, 9.60g. LC-MS m/z 291 APCI +
- (v) Methyl 3-(benzyloxy)-4-(2-(ethoxycarbonyl)-3-oxobutyl)benzoate
The subtitle compound was prepared using the product from step (iv) (9.6g) and the
method of example 34 step (i), to give an oil, 8.6g.
LC-MS m/z 385 APCI +
- (vi) Methyl 4-((2-amino-4-hydroxy-6-methylpyrimidin-5-yl)methyl)-3-(benzyloxy)benzoate
The subtitle compound was prepared using the product from step (v) (8.6g) and the
method of example 34 step (ii) to give a solid, 5.87g.
1H NMR DMSOd-6: δ 7.59 - 7.37 (m, 7H), 7.37 - 7.28 (m, 2H), 7.01 (d, 1H), 6.48 - 6.33
(m, 1H), 5.24 (s, 2H), 3.83 (s, 3H), 3.68 (s, 2H), 1.90 (s, 3H)
LC-MS m/z 380 APCI +
- (vii) Methyl 4-((2-amino-4-chloro-6-methylpyrimidin-5-yl)methyl)-3-(benzyloxy)benzoate
POCl3 (25 ml) was added to the product from step (vi) (4.8g) and stirred at 80°C for 18h.
After cooling, the reaction was evaporated to dryness and the residue diluted with
water (100 mL) and neutralized with solid NaHCO3. The mixture was heated at 50°C for 30min and left to cool. The subtitle compound
was collected by filtration as a solid, 3.78g.
1H NMR DMSOd-6: δ 7.63 - 7.29 (m, 8H), 6.93 - 6.77 (m, 2H), 5.28 (s, 2H), 3.97 (s,
2H), 3.83 (s, 3H), 2.15 (s, 3H)
LC-MS m/z 398 APCI +
- (viii)(4-((2-Amino-4-chloro-6-methylpyrimidin-5-yl)methyl)-3-(benzyloxy)phenyl)methanol
A solution of DIBAL-H (28.5 ml,1M in THF) was added portion wise over 30min to a stirred
solution of the product from step (vii) (3.78g) in THF (40mL) at -20°C. The mixture
was allowed to warm to 0 °C over 2h and then EtOAc (30 mL) and isopropanol (10 mL)
were added. The reaction was poured into a sat. solution of sodium sulfate and stirred
for 1h. The organics were separated, dried, filtered and the solvent evaporated under
reduced pressure. The crude product was purified using chromatography to give the
subtitle compound as a white solid, 2.60g.
LC-MS m/z 370 APCI +
- (ix) 5-(2-(Benzyloxy)-4-(chloromethyl)benzyl)-4-chloro-6-methylpyrimidin-2-amine
Thionyl chloride (0.513 ml) was added to a stirred solution of the product from step
(viii) (2.6g) in DCM (120mL) at 0 °C. The mixture was allowed to warm to rt and stirred
for 1h. The reaction mixture was poured into sat. sodium bicarbonate solution (100
mL) and extracted with EtOAc, the combined organics were dried filtered and the solvent
evaporated under reduced pressure to give the subtitle compound as a yellow solid,
2.78g. LC-MS m/z 389 APCI +
- (x) 2-(4-((2-Amino-4-chloro-6-methylpyrimidin-5-yl)methyl)-3-(benzyloxy)phenyl)acetonitrile
The subtitle compound was prepared using the product from step (ix) (2.78g) and the
method of example 20 step (vi) to give a solid, 2.1g.
1H NMR DMSOd-6: δ 7.53 - 7.29 (m, 5H), 7.10 (d, 1H), 6.89 - 6.80 (m, 3H), 6.68 (d,
1H), 5.19 (s, 2H), 3.97 (s, 2H), 3.88 (s, 2H), 2.14 (s, 3H)
LC-MS m/z 379 APCI +
- (xi) (S)-2-(4-((2-Amino-4-(1-hydroxyhexan-3-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-(benzyloxy)phenyl)acetic
acid
The subtitle compound was prepared using the product of step (x) (250mg) and the method
of example 72 step (i) with (S)-3-aminohexan-1-ol to give a solid, 250mg.
LC-MS m/z 479 APCI +
- (xii) (S)-2-(4-((2-Amino-4-(1-hydroxyhexan-3-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-hydroxyphenyl)acetic
acid
The product from step (xi) (250mg) was dissolved in EtOH (25 mL) and Pd/C (200mg)
in EtOH (5mL) was added, then the mixture stirred under hydrogen (4 bar) at rt for
16h. The catalyst was filtered off and the solvent was evaporated. The crude product
was purified by RPHPLC to give the subtitle compound as a white solid, 70mg.
LC-MS m/z 460 APCI +
- (xiii)(S)-Methyl 2-(4-((2-amino-4-(1-hydroxyhexan-3-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-hydroxyphenyl)acetate
The product from step (xii) (70mg) was dissolved in MeOH (5mL) and TMSCI (2ml) was
added and stirred for 1h. The solvents were evaporated, the residue was purified on
RPHPLC to give the title compound as a white solid, 50mg.
1H NMR DMSOd-6: δ 6.76 - 6.67 (m, 2H), 6.57 - 6.48 (m, 1H), 5.60 (s, 2H), 4.22 - 4.08
(m, 1H), 3.59 - 3.46 (m, 6H), 2.11 (s, 3H), 1.65 - 1.51 (m, 1H), 1.51-1.18 (m, 4H),
1.16 - 1.01 (m, 2H), 0.76 (t, 3H)
LC-MS m/z 403 multimode+
Example 76
(S)-(1-Methylpiperidin-4-yl)methyl 2-(4-((2-amino-4-(1-hydroxypentan-2-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-hydroxyphenyl)acetate
[0292]
- (i) (S)-2-(4-((2-Amino-4-(1-hydroxypentan-3-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-(benzyloxy)phenyl)acetic
acid
The subtitle compound was prepared using the product of example 75 step (x) (200mg)
and (S)-(+)-2-amino-1-pentanol (188mg), via the method of example 72 step (i) to give
a yellow solid, 100mg.
LC-MS m/z 479 APCI +
- (ii) (S)-(1-Methylpiperidin-4-yl)methyl 2-(4-((2-amino-4-(1-hydroxypentan-2-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-(benzyloxy)phenyl)acetate
The subtitle compound was prepared using the product from step (i) (260mg) and the
method of example 71 to give a white solid, 100mg.
LC-MS m/z 576 APCI +
- (iii) (S)-(1-Methylpiperidin-4-yl)methyl 2-(4-((2-amino-4-(1-hydroxypentan-2-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-hydroxyphenyl)acetate
The product from step (ii) (100mg) was dissolved in EtOAc (10mL) and Pd/C (73.9 mg)
in EtOAc (1mL) was added and the reaction stirred under hydrogen (4 bar) at rt for
16h. The catalyst was filtered off and the solvents were evaporated. The crude product
was purified by RPHPLC to give the title compound as a white solid, 22mg.
1H NMR DMSOd-6: δ 6.74 - 6.70 (m, 2H), 6.56 (d, 1H), 5.62 - 5.54 (m, 3H), 4.14 - 3.99
(m, 1H), 3.86 (d, 2H), 3.55 (s, 2H), 3.50 (s, 2H), 3.24 - 3.19 (m, 1H), 2.75 - 2.62
(m, 2H), 2.15 - 2.04 (m, 6H), 1.82 - 1.71 (m, 2H), 1.59 - 1.43 (m, 4H), 1.34 - 0.98
(m, 6H), 0.77 (t, 3H)
LC-MS m/z 486 multimode+
Example 77
Methyl 2-(4-((2-amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)-3-hydroxyphenyl)acetate
[0293]

[0294] To the product from example 72 step (i) (550mg) in DCM (20mL), BBr
3 (0.29ml) was added dropwise and the reaction mixture stirred for 5h. MeOH (4mL) was
added followed by 4M HCl in dioxane (0.5mL) and stirred for 16h and the solvents evaporated.
The residue was purified by RPHPLC to give the title compound as a white solid, 8mg.
1H NMR DMSO-6: δ 6.73 (d,1H), 6.69 - 6.65 (m, 1H), 6.58 - 6.53 (m, 1H), 6.12 - 5.98
(m, 1H), 5.59 (d, 2H), 3.58 (s, 3H), 3.55 (s, 2H), 3.51 (s, 2H), 3.24 - 3.17 (m, 2H),
2.05 (s, 3H), 1.47 - 1.35 (m, 2H), 1.26 - 1.15 (m, 3H), 0.84 (t, 3H)
LC-MS m/z 359 multimode+
Example 78
(S)-4-(Pyrrolidin-1-yl)butyl 2-(4-((2-amino-4-(1-hydroxyhexan-3-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-hydroxyphenyl)acetate
[0295]
- (i) (S)-2-(4-((2-Amino-4-(1-hydroxyhexan-3-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-(benzyloxy)phenyl)acetic
acid
The subtitle compound was prepared using the product of example 75 step (x) and (S)-3-aminohexan-1-ol,
via the method of example 72 step (i) to give a white solid, 300mg.
LC-MS m/z 479 APCI +
- (ii) (S)-4-(Pyrrolidin-1-yl)butyl 2-(4-((2-amino-4-(1-hydroxyhexan-3-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-(benzyloxy)phenyl)acetate,
bis trifluoroacetate salt
The subtitle compound was prepared using the product of step (i) (154mg) and 4-(pyrrolidin-1-yl)butan-1-ol
(18mg), via the method of example 74 step (iii). The product was purified by RPHPLC
to give the product as the TFA salt, 170mg.
LC-MS m/z 603 APCI +
- (iii) (S)-4-(Pyrrolidin-1-yl)butyl 2-(4-((2-amino-4-(1-hydroxyhexan-3-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-hydroxyphenyl)acetate
The title compound was prepared using the product from step (ii) (170mg) and the method
of example 76 step (iii) to give a white solid, 50mg.
1H NMR DMSOd-6: δ 6.76 - 6.68 (m, 2H), 6.59 - 6.54 (m, 1H), 5.69 - 5.58 (m, 3H), 4.19
- 4.10 (m, 1H), 4.04 - 3.95 (m, 2H), 3.55 (s, 2H), 3.49 (s, 2H), 3.42 - 3.34 (m, 1H),
2.39 - 2.27 (m, 6H), 2.08 (s, 3H), 1.69 - 1.49 (m, 7H), 1.47 - 1.21 (m, 6H), 1.12
- 1.01 (m, 2H), 0.81 - 0.70 (m, 3H)
LC-MS m/z 514 multimode+
Example 79
4-(Pyrrolidin-1-yl)butyl 2-(4-((2-amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)-3-hydroxyphenyl)acetate
[0296]
- (i) 2-(4-((2-Amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)-3-hydroxyphenyl)acetic
acid
To the product of example 77 (100mg) in THF (5 mL), LiOH (35.1 mg) in water (5 mL)
was added and stirred for 16h at rt. The solvent was evaporated, the residue redissolved
in water and AcOH was added. The precipitate was filtered and dried to give the subtitle
compound as a white solid, 50mg.
LC-MS m/z 345 APCI +
- (ii) 4-(Pyrrolidin-1-yl)butyl 2-(4-((2-amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)-3-hydroxyphenyl)acetate
The title compound was prepared using the product of step (i) (50mg), 4-(pyrrolidin-1-yl)
butan-1-ol (64.2mg) and the method of example 74 step (iii) to give a tan solid, 9mg.
1H NMR DMSOd-6: δ 6.75 - 6.64 (m, 2H), 6.57 - 6.51 (m, 1H), 5.60 (s, 2H), 4.01 (t,
2H), 3.58 - 3.51 (m, 2H), 3.52 - 3.45 (m, 2H), 3.25 - 3.15 (m, 2H), 2.38 - 2.24 (m,
6H), 2.05 (s, 3H), 1.68 - 1.50 (m, 5H), 1.51 - 1.33 (m, 4H), 1.29 - 1.11 (m, 3H),
0.84 (t, 3H) LC-MS m/z 470 multimode+
Example 80
(S)-Methyl 2-(3-((2-amino-4-(1-hydroxypentan-2-ylamino)-6-methylpyrimidin-5-yl)methyl)-4-methoxyphenyl)acetate,
benzene sulphonic acid salt
[0297]
- (i) 2-(3-(Bromomethyl)-4-methoxyphenyl)acetic acid
NBS (2.72g) and AIBN (0.136g) were added in one portion to a solution of 2-(4-methoxy-3-methylphenyl)acetic
acid (2.99g) in EtOAc (50ml) and stirred at 80°C for 2h. Another portion of AIBN (0.136g)
was added and the suspension stirred for a further 2h. The reaction mixture was diluted
with EtOAc, washed with sat. sodium thiosulfate solution, 2M HCl, water, and sat.
brine. The organic phase was dried, filtered and evaporated to afford the subtitle
compound, 4.10g.
LC-MS m/z 260 APCI +
- (ii) Methyl 2-(3-(bromomethyl)-4-methoxyphenyl)acetate
Thionyl chloride (1.359ml) was added dropwise to a solution of the product from step
(i) (4.02g) in MeOH (50mL), the resulting suspension was stirred at 0 °C for 10min
then warmed to rt for 18h. The solvent was evaporated and the residue was diluted
with EtOAc washed with sat. NaHCO3 and sat. brine. The organic phase was dried, filtered and evaporated. The crude product
was purified by chromatography, to give the subtitle compound as a yellow oil, 1.47g.
LC-MS m/z 274 APCI +
- (iii) Ethyl 2-(2-methoxy-5-(2-methoxy-2-oxoethyl)benzyl)-3-oxobutanoate
The title compound was prepared using the product of step (ii) (1.2g) and the method
of example 34 step (i) to give a solid, 0.52g.
1H NMR DMSOd-6: δ 7.09 (dd, 1H), 6.96 (d, 1H), 6.90 (d, 1H), 4.08 - 3.99 (m, 3H), 3.77
(s, 3H), 3.58 (s, 3H), 3.54 (s, 2H), 3.03 (dd1H), 2.90 (dd, 1H), 2.15 (s, 3H), 1.10
(t, 3H) LC-MS m/z 323 APCI +
- (iv) Methyl 2-(3-((2-amino-4-hydroxy-6-methylpyrimidin-5-yl)methyl)-4-methoxyphenyl)acetate
Guanidine carbonate (0.443g) was added to a solution of the product from step (iii)
(0.52g) in MeOH (10ml) and stirred at 50°C for 15h. The solvent was evaporated and
the residue stirred in EtOAc (10mL) and water (10mL), the resulting solid was filtered
off. Further product was collected by evaporation of the filtrate, the solids were
combined to give the subtitle compound as a yellow solid, 0.607g.
1H NMR DMSOd-6: δ 7.01 (dd, 1H), 6.88 (d, 1H), 6.73 (d, 1H), 6.33 (s, 2H), 3.80 (s,
3H), 3.55 (s, 2H), 3.54 (s, 2H), 3.49 (s, 3H), 1.92 (s, 3H)
LC-MS m/z 318 APCI +
- (v) Methyl 2-(3-((2-amino-4-(mesitylsulfonyloxy)-6-methylpyrimidin-5-yl)methyl)-4-methoxyphenyl)acetate
The subtitle compound was prepared using the product from step (iv) (0.55g) and the
method of example 34 step (iii) to give a solid, 0.6g.
1H NMR DMSOd-6: δ 7.08 - 7.06 (m, 3H), 6.90 (d, 1H), 6.58 (d, 1H), 6.46 (s, 2H), 3.77
(s, 3H), 3.66 (s, 2H), 3.55 (s, 3H), 3.48 (s, 2H), 2.47 (s, 6H), 2.28 (s, 3H), 2.15
(s, 3H) LC-MS m/z 500 APCI +
- (vi) (S)-2-(3-((2-Amino-4-(1-hydroxypentan-2-ylamino)-6-methylpyrimidin-5-yl)methyl)-4-methoxyphenyl)acetic
acid
(S)-(+)-2-Amino-1-pentanol (100mg) was added to a suspension of the product from step
(v) (243mg) in butan-1-ol (2mL). The reaction was heated in a microwave at 160°C for
2h. 5M KOH (0.5mL) was added and the mixture heated in a microwave at 100°C for 1h.
The solvent was evaporated under reduced pressure and the residue purified by RPHPLC
to give the subtitle compound as a white solid, 60mg.
LC-MS m/z 389 APCI +
- (vii) (S)-Methyl 2-(3-((2-amino-4-(1-hydroxypentan-2-ylamino)-6-methylpyrimidin-5-yl)methyl)-4-methoxyphenyl)acetate,
benzene sulphonic acid salt
The title compound was prepared using the product from step (vi) (50mg) and the method
of example 34 step (ix) to give a white solid, 36mg.
1H NMR DMSOd-6: δ 7.62 - 7.56 (m, 2H), 7.36 - 7.22 (m, 6H), 7.11 (dd,1H), 6.97 (d,
1H), 6.79 (d,1H), 4.74 (t, 1H), 4.33 4.21 (m, 1H), 3.83 (s, 3H), 3.72 (s, 2H), 3.56
(s, 3H), 3.53 (s, 2H), 3.44 - 3.33 (m, 2H), 2.16 (s, 3H), 1.59 - 1.44 (m, 1H), 1.42
- 1.29 (m, 1H), 1.17 - 1.04 (m, 2H), 0.79 (t, 3H)
LC-MS m/z 403 multimode+
Example 81
(S)-(1-Methylpiperidin-4-yl)methyl 2-(4-((2-amino-4-(2-hydroxybutylamino)-6-methylpyrimidin-5-yl)methyl)phenyl)acetate,
saccharin salt
[0298]
- (i) Methyl 2-(4-(cyanomethyl)benzyl)-3-oxobutanoate
A stirred mixture of methyl 3-hydroxy-2-methylenebutanoate (19.5g), 2-(4-bromophenyl)acetonitrile
(40g), PdOAc2 (2g), tetrabutylammonium bromide (40g) and NaHCO3 (31.5g) in THF (300ml) was heated under N2 at reflux for 24h. The mixture was cooled, diluted with ether (500ml) and filtered
through celite. The filtrate was washed with water, dried and evaporated under reduced
pressure to give an oil, used crude in next step. LC-MS m/z 244 APCI -
- (ii) 2-(4-((2-Amino-4-hydroxy-6-methylpyrimidin-5-yl)methyl)phenyl)acetonitrile
A mixture of the crude product from step (i) and guanidine (16g) in EtOH (350ml) was
heated under reflux for 5h. The mixture was cooled, neutralised with acetic acid,
and the solid filtered and dried, 22.1g.
1H NMR DMSOd-6 δ 10.91 (brs, 1H), 7.20-7.17 (m, 4H), 6.38 (s, 2H), 3.95 (s, 2H), 3.63
(s, 2H), 2.00 (s, 3H)
LC-MS m/z 255 APCI +
- (iii) 2-(4-((2-Amino-4-chloro-6-methylpyrimidin-5-yl)methyl)phenyl)acetonitrile
The subtitle compound was prepared using the product from step (ii) (4g) and the method
of example 75 step (vii) to give a solid, 3.2g.
LC-MS m/z 274 APCI +
- (iv) (E)-N'-(4-Chloro-5-(4-(cyanomethyl)benzyl)-6-methylpyrimidin-2-yl)-N,N-dimethylformamide
N,N-Dimethylformamide dimethyl acetal (0.147ml) was added to a stirred suspension
of the product from step (iii) (200mg,) in toluene (3mL). The mixture was heated at
110°C for 3h and then the solvent evaporated under reduced pressure to give the subtitle
compound as a brown oil, 240mg.
1H NMR DMSOd-6: δ 8.58 (s, 2H), 7.27 (d, 2H), 7.24 (d, 2H), 7.17 (d, 2H), 7.13 (d,
2H), 4.05 (s, 2H), 3.98 (s, 2H), 3.32 (s, 4H), 3.14 (s, 6H), 3.02 (s, 6H), 2.32 (s,
3H), 2.30 (s, 3H)
LC-MS m/z 328 APCI +
- (v) (S)-5-Ethyloxazolidin-2-one
4-Nitrobenzoic acid (0.348g) was added to a stirred solution of (R,R)-(-)-N,N'-bis(3,5-di-t-butylsalicylid-ene)-1,2-cyclohexanediaminocobalt(II)
(0.628g) in MTBE (10mL). Urethane (3.09g,) and 2-ethyloxirane (6.02ml) was added and
the mixture stirred for 18h at rt. The solution was then added portion wise to a suspension
of sodium hydride (2.77g) in THF (50mL) and stirred for 3h and then sat. NH3Cl was added. The organic phase was washed with brine, dried, filtered and evaporated
under reduced pressure. The crude product was purified using chromatography, to afford
the subtitle compound as a white solid, 1g.
1H NMR DMSOd-6: δ 5.34 (s, 1H), 4.66 - 4.53 (m, 1H), 3.67 (dd, 1H), 3.25 (dd, 1H),
1.88 - 1.65 (m, 2H), 1.02 (t, 3H)
- (vi) (S,E)-N'-(5-(4-(Cyanomethyl)benzyl)-4-(5-ethyl-2-oxooxazolidin-3-yl)-6-methylpyrimidin-2-yl)-N,N-dimethylformimidamide
Palladium(II) acetate (8.22mg) and 9,9-dimethyl-4,5-bis(diphenylphosphino)xanthene
(42.4 mg) were added to dioxane (3mL) and the solution stirred at rt for 10min. The
product from step (iv) (240mg), (S)-5-ethyloxazolidin-2-one (169mg) and K2CO3 (202mg) were added and the mixture heated at 100 °C for 1h. The solvent was evaporated
under reduced pressure and the crude product was purified using chromatography, to
give the subtitle compound as a white solid, 136mg.
1H NMR DMSOd-6: δ 8.59 (s, 1H), 7.24 (d, 2H), 7.02 (d, 2H), 4.49 - 4.37 (m, 1H), 3.97
(s, 2H), 3.96 (s, 2H), 3.17 (t, 2H), 3.12 (s, 3H), 3.01 (s, 3H), 2.32 (s, 3H), 1.54
- 1.42 (m, 2H), 0.84 (t, 3H)
LC-MS m/z 407 APCI +
- (vii) (S)-2-(4-((2-Amino-4-(2-hydroxybutylamino)-6-methylpyrimidin-5-yl)methyl)phenyl)acetic
acid
Aq. 5M KOH (1ml) was added to a stirred solution of the product from step (vi) (136mg)
in butan-1-ol (2mL). The solution was heated at 100°C for 15h and the solvent evaporated
under reduced pressure. The residue was diluted with MeOH (2mL) and the pH adjusted
to ∼7 using acetic acid. The solution was purified by RPHPLC to give the subtitle
compound as a white solid, 55mg.
1H NMR DMSOd-6: δ 7.06 (d, 2H), 6.93 (d, 2H), 5.94 (t, 1H), 5.70 (s, 2H), 3.67 (s,
2H), 3.41 - 3.29 (m, 2H), 3.18 - 3.06 (m, 3H), 2.03 (s, 3H), 1.38 - 1.17 (m, 2H),
0.83 (t, 3H) LC-MS m/z 345 APCI +
- (viii)(S)-(1-Methylpiperidin-4-yl)methyl 2-(4-((2-amino-4-(2-hydroxybutylamino)-6-methylpyrimidin-5-yl)methyl)phenyl)acetate,
saccharin salt
The title compound was prepared using the product from step (vii) and the method of
example 74 step (iii) to give a white solid, 20mg.
1H NMR DMSOd-6: δ 7.65 - 7.61 (m, 1H), 7.60 - 7.55 (m, 3H), 7.15 (d, 2H), 7.07 (d,
2H), 4.78 - 4.72 (m, 1H), 3.90 (d, 2H), 3.75 (s, 2H), 3.62 (s, 2H), 3.52 - 3.45 (m,
2H), 3.23 - 3.16 (m, 2H), 3.06 - 2.93 (m, 2H), 2.43 - 2.36 (m, 3H), 2.06 (s, 3H),
1.71 - 1.60 (m, 4H), 1.35 - 1.14 (m, 5H), 0.82 (t, 3H)
LC-MS m/z 454 multimode+
Example 82
4-(Pyrrolidin-1-yl)butyl 2-(4-((2-amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)phenyl)acetate,
saccharin salt
[0299]

[0300] To a mixture of the product of example 41 step (vi) (240mg) in DMF (10ml), 4-(pyrrolidin-1-yl)butan-1-o
1 (209mg) and Hunig's base (0.4ml) were added followed by HATU (278mg), and the mixture
was stirred for 24h then purified by RPHPLC, The product was dissolved in MeCN (5ml)
and saccharin (80mg) added and the solvent evaporated under reduced pressure. The
residue was triturated with ether and filtered to give the title compound as a solid,
195mg.
1H NMR DMSO-d6: δ 7.66-7.56 (m, 4H), 7.16 (d, 2H), 7.07 (d, 2H), 6.84 (s, 1H), 6.34
(s, 2H), 4.03 (t, 2H), 3.76 (s, 2H), 3.61 (s, 2H), 3.32-3.28 (m, 2H), 2.96-2.80 (m,
6H), 2.08 (s, 3H), 1.92 (s, 4H), 1.82 (s, 4H), 1.48-1.40 (m, 2H), 1.23-1.14 (m, 2H),
0.83 (t, 3H)
LC-MS m/z 454 multimode+
Example 83
(1-Methylpiperidin-4-yl)methyl 2-(3-((2-amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)-4-methoxyphenyl)acetate
[0301]
- (i) Methyl 2-(5-(cyanomethyl)-2-methoxybenzyl)-3-oxobutanoate
N,N-dimethylacetamide (200mL) was added to Pd-118 (1.009g) and tetrabutylammonium
chloride hydrate (0.916g), followed by 2-(3-bromo-4-methoxyphenyl)acetonitrile (7g).
Methyl 3-hydroxy-2-methylenebutyrate (5.64mL) and dicyclohexylamine (9.25mL) were
added and the solution was heated at 80°C for 3 days. The reaction mixture was diluted
with EtOAc (200mL) and extracted with water. The organic phase was dried, filtered
and evaporated under reduced pressure. The crude product was purified by chromatography
to afford the subtitle compound as an orange oil, 5.01g. LC-MS m/z 276 APCI +
- (ii) 2-(3-((2-Amino-4-hydroxy-6-methylpyrimidin-5-yl)methyl)-4-methoxyphenyl)acetonitrile
Guanidine carbonate (5g) was added to a stirred solution of the product from step
(i) (5.01 g) in MeOH (80mL). The suspension was heated at 50°C for 15h and then the
solvent evaporated under reduced pressure. The residue was diluted with water (20mL)
and diethyl ether (20mL). The resulting precipitate was collected by filtration and
the solid was dried under vacuum to give the subtitle compound as an orange solid,
2.8g.
1H NMR DMSO-d6: δ7.11 (dd, 1H), 6.95 (d, 1H), 6.81 (d, 1H), 6.46 (s, 2H), 3.86 (s,
2H), 3.82 (s, 3H), 3.56 (s, 2H), 1.93 (s, 3H)
LC-MS m/z 285 APCI +
- (iii) 2-(3-((2-Amino-4-chloro-6-methylpyrimidin-5-yl)methyl)-4-methoxyphenyl)acetonitrile
The product from step (ii) (2.8g) was added to POCl3 (25ml) and heated at 90°C for 15h and then evaporated under reduced pressure. The
residue was diluted with ice/water (20 mL) and the mixture adjusted to pH ∼7 with
sodium bicarbonate. The mixture was heated at 50°C for 1h and the precipitate collected
by filtration. The solid was dried under vacuum to give the subtitle compound as a
brown solid, 2.88g.
LC-MS m/z 303 APCI +
- (iv) 2-(3-((2-Amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)-4-methoxyphenyl)acetic
acid
Butylamine (0.393mL) was added to a stirred suspension of the product from step (iii)
(0.4g) in butan-1-ol (3mL) and heated in a microwave, at 150°C for 1h. The reaction
was repeated on an identical scale and the two batches were combined. 5M KOH (3mL)
was added and the mixture was heated at 100°C for 48h. The solvent was evaporated
under reduced pressure and the residue diluted with water (5mL). The pH was adjusted
to ∼7 using conc. HCl and the precipitate was collected by filtration then dried under
vacuum to give the subtitle compound, 0.7g.
LC-MS m/z 359 APCI +
- (v) Methyl 2-(3-((2-amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)-4-methoxyphenyl)acetate
4M HCl in dioxane (1mL) was added to a stirred suspension of the product from step
(iv) (650mg) in MeOH (2mL). The suspension was heated at 60°C for 2h. The solvent
was evaporated under reduced pressure to give the subtitle compound as a brown solid,
630mg.
LC-MS m/z 373 APCI +
- (vi) (1-Methylpiperidin-4-yl)methyl2-(3-((2-amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)-4-methoxyphenyl)acetate
4M HCl in dioxane (1.5mL) was added to a mixture of the product from step (v) (300mg)
and (1-methylpiperidin-4-yl)methanol (520mg). The suspension was heated at 80°C for
24h and the solvent evaporated under reduced pressure.The residue was purified by
RPHPLC to give the title compound as a gum, 10mg.
1H NMR DMSO-d6: δ7.05 (d, 1H), 6.93 (d, 1H), 6.65 (s, 1H), 5.98 (t, 1H), 5.69 (s, 2H),
3.84 - 3.79 (m, 5H), 3.60 (s, 2H), 3.47 (s, 2H), 3.28 - 3.19 (m, 2H), 2.76 - 2.71
(m, 2H), 2.13 (s, 3H), 1.98 (s, 3H), 1.82 - 1.72 (m, 2H), 1.57 - 1.35 (m, 5H), 1.26
- 1.04 (m, 4H), 0.84 (t, 3H)
LC-MS m/z 470 multimode+
Example 84
4-(Pyrrolidin-1-yl)butyl 2-(3-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl)acetate,
saccharin salt
[0302]
- (i) Methyl 2-(3-(cyanomethyl)benzyl)-3-oxobutanoate
A stirred mixture of methyl 3-hydroxy-2-methylenebutanoate (11.37ml), 2-(3-bromophenyl)acetonitrile
(22g) PdOAc2 (3.15g), tetrabutylammonium bromide (30.1g) and NaHCO3 (19.64g) in THF (40ml) was heated at reflux for 24h. The mixture was partitioned
betwen ether and water, the organics separated, washed with water, dried and evaporated
under reduced pressure to give the subtitle compound, 22g.
LC-MS m/z 244 APCI -
- (ii) 2-(3-((2-Amino-4-hydroxy-6-methylpyrimidin-5-yl)methyl)phenyl)acetonitrile
The title compound was prepared using the method of example 83 step (ii) and the product
of step (i) (22g) to give the title compound as a gum, 16.2g.
LC-MS m/z 255 APCI +
- (iii) 2-(3-((2-Amino-4-chloro-6-methylpyrimidin-5-yl)methyl)phenyl)acetonitrile
The title compound was prepared using the method of example 83 step (iii) and the
product of step (ii) (3g) to give the title compound as a solid, 1.76g.
LC-MS m/z 273 APCI +
- (iv) 2-(3-((2-Amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl)acetonitrile
The product from step (iii) (1g) was combined with butan-1-ol (25mL) and pentan-1-amine
(4 mL) was added. The reaction mixture was heated to 110°C for 18h. The solvents were
evaporated and the product purified using chromatography to give the subtitle compound
as an orange oil, 600mg.
LC-MS m/z 324 APCI +
- (v) 2-(3-((2-Hydroxy-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl)acetic acid
The product from step (iv) (600mg) was dissolved in butan-1-ol (50mL) and aq. 5M KOH
(2mL) was added. The reaction was heated in a microwave for 8h at 160°C. The solvents
were evaporated and the product purified by RPHPLC to give the subtitle compound as
a solid, 252mg.
1H NMR DMSO-d6: δ7.20 - 7.12 (m, 1H), 7.03 (d, 2H), 6.92 (d, 1H), 6.23 (s, 1H), 5.81
(s, 2H), 3.71 (s, 2H), 3.40 (s, 2H), 3.28 - 3.18 (m, 2H), 2.00 (s, 3H), 1.49 - 1.39
(m, 2H), 1.29 - 1.19 (m, 2H), 1.20 - 1.09 (m, 2H), 0.82 (t, 3H)
LC-MS m/z 343 APCI +
- (vi) 4-(Pyrrolidin-1-yl)butyl 2-(3-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl)acetate,
saccharin salt
The title compound was prepared using the method of example 82 and the product from
step (v) (115mg) and 4-(pyrrolidin-1-yl)butan-1-ol (96mg) to give a white solid, 29mg.
1H NMR DMSO-d6: δ7.66 - 7.53 (m, 1H), 7.26 - 7.19 (m, 4H), 7.11 - 7.06 (m, 1H), 7.05
- 6.99 (m, 1H), 4.07 - 3.98 (m, 2H), 3.79 (s, 2H), 3.61 (d, 3H), 3.11 - 3.02 (m, 4H),
3.02 - 2.93 (m, 2H), 2.13 (d 4H), 1.88 (s, 4H), 1.66 - 1.54 (m, 4H), 1.52 - 1.41 (m,
2H), 1.30 - 1.19 (m, 2H), 1.19 - 1.07 (m, 2H), 0.82 (t, 3H)
LC-MS m/z 468 multimode+
Example 85
(1-Methylpiperidin-4-yl)methyl 2-(3-((2-amino-4-methyl-6-(pentylamino)pyrimidin-5-yl)methyl)phenyl)acetate
[0303]

[0304] The title compound was prepared using the method of example 82 using the product
of example 84 step (v) (115mg) and (1-methylpiperidin-4-yl)methanol (87mg) to give
a solid, 19mg.
1H NMR DMSO-d6: δ7.22 - 7.17 (m, 1H), 7.07 - 6.96 (m, 3H), 6.17 - 6.11 (m, 1H), 5.63
(s, 2H), 3.88 - 3.83 (m, 2H), 3.71 (s, 2H), 3.59 (s, 2H), 3.27 - 3.21 (m, 2H), 2.74
- 2.67 (m, 2H), 2.12 (s, 3H), 1.99 (s, 3H), 1.81 - 1.73 (m, 2H), 1.57 - 1.40 (m, 5H),
1.27 - 1.11 (m, 6H), 0.82 (t, 3H)
LC-MS m/z 454 multimode+
Example 86
(S)-4-(Dimethylamino)butyl 2-(4-((2-amino-4-(1-hydroxyhexan-3-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-fluorophenyl)acetate,
saccharin salt
[0305]

The title compound was prepared using the method of example 74 and 4-(dimethylamino)butan-1-ol
to give a white solid, 9mg.
1H NMR DMSO-d6: δ7.67 - 7.54 (m, 5H), 7.10 (dd, 1H), 6.97 (dd, 1H), 6.82 (dd, 1H),
6.28 (s, 1H), 6.15 (s, 2H), 4.44 - 4.33 (m, 1H), 4.32 - 4.22 (m, 1H), 4.03 (t, 2H),
3.75 (s, 2H), 3.66 (s, 2H), 3.46 - 3.38 (m, 2H), 2.36 (s, 6H), 1.99 (s, 3H), 1.66
- 1.34 (m, 10H), 1.21 - 1.10 (m, 2H), 0.80 (t, 3H)
LC-MS m/z 490 multimode+
Example 87
(S)-4-(4-Methylpiperazin-1-yl)butyl 2-(4-((2-amino-4-(1-hydroxyhexan-3-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-fluorophenyl)acetate,
saccharin salt
[0306]

The title compound was prepared using the method of example 74 and 4-(4-methylpiperazin-1-yl)butan-1-ol
to give a foam, 63mg.
1H NMR DMSO-d6: δ7.65 - 7.55 (m, 4H), 7.11 (dd, 1H), 6.98 (dd, 1H), 6.86 (dd, 1H),
6.77 - 6.62 (m, 2H), 4.42 - 4.27 (m, 2H), 4.03 (t, 2H), 3.79 (s, 2H), 3.66 (s, 2H),
3.53 - 3.36 (m, 2H), 2.65 - 2.54 (m, 2H), 2.40 - 2.29 (m, 11H), 2.05 (s, 3H), 1.65
- 1.50 (m, 4H), 1.50 - 1.35 (m, 4H), 1.22 - 1.07 (m, 2H), 0.80 (t, 3H)
LC-MS m/z 545 multimode+
Example 88
(S)-Methyl 2-(4-((2-amino-4-(1-hydroxypentan-2-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-hydroxyphenyl)acetate
[0307]
- (i) (S)-2-(4-((2-Amino-4-(1-hydroxypentan-2-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-hydroxyphenyl)acetic
acid
To the product from example 30 step (v) (250mg) in DMF (20ml), sodium thiomethoxide
(180mg) was added and stirred at 100°C for 16h. The solvents were evaporated, and
crude product purified by RPHPLC to give the subtitle compound as a colourless gum,
120mg. LC/MS m/z 375 APCI+
- (ii) (S)-Methyl2-(4-((2-amino-4-(1-hydroxypentan-2-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-hydroxyphenyl)acetate
The product from step (i) (120mg) was dissolved in MeOH (10mL) and TMS-Cl (0.205ml)
was added and stirred at rt overnight. The crude product was purified by RPHPLC to
give the title compound as a white solid, 35mg.
1H NMR DMSOd-6: δ6.74 - 6.70 (m, 2H), 6.56 (dd, 1H), 5.62 - 5.54 (m, 3H), 4.11 - 4.01
(m, 1H), 3.59 - 3.53 (m, 5H), 3.52 - 3.48 (m, 2H), 3.40 - 3.32 (m, 1H), 3.30 - 3.17
(m, 1H), 2.10 (s, 3H), 1.55 - 1.45 (m, 1H), 1.33 - 1.21 (m, 2H), 1.15 - 0.99 (m, 2H),
0.76 (t, 3H).
LC-MS m/z 389 multimode +
Example 89
2-Hydroxyethyl 2-(4-((2-amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)-3-methoxyphenyl)acetate
[0308]
- (i) Methyl4-((2-amino-4-chloro-6-methylpyrimidin-5-yl)methyl)-3-methoxybenzoate
The product from example 21 step (ii) (7g) was added portion wise over 5min to POCl5 (32ml) and heated at 100°C for 20h and then allowed to cool. The solvent was removed
under reduced pressure and the residue was cautiously diluted with ice water (100mL)
and adjusted to pH ∼7 using NaHCO3 and then heated at 50°C for 1h. The precipitate was collected by filtration and dried
under vacuum to give the subtitle compound as a cream solid, 3g.
LC/MS m/z 322 APCI+
- (ii) Methyl 4-((2-amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)-3-methoxybenzoate
A stirred mixture of the product from step (i) (8 g) and butylamine (7.40 ml) in dioxane
(100 ml) was heated at 90°C for 72h. More butylamine (7.40 ml) was added and the reaction
mixture stirred for a further 70 hrs. The solvent was evaporated and the crude product
was purified by chromatography (5%MeOH/DCM) to afford the subtitle compound as a tan
solid, 4.5g.
1H NMR DMSO d-6: δ 7.51 - 7.45 (m, 2H), 7.39 - 7.22 (m, 1H), 6.89 (d, 1H), 6.87 - 6.70
(m, 2H), 3.91 (d, 3H), 3.84 (s, 3H), 3.73 (s, 2H), 2.03 (s, 3H), 1.51 - 1.38 (m, 2H),
1.27 - 1.13 (m, 2H), 0.84 (t, 3H).
LC/MS m/z 359 APCI+
- (iii) (4-((2-Amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)-3-methoxyphenyl)methanol
A solution of DIBAL-H (80ml, 1M in hexanes) was added portion wise over 20min to a
stirred solution of the product from step (ii) (3.8g) in THF (25mL) at 0 °C. The mixture
was allowed to warm to rt, stirred for 2h, then cooled to 0°C. Isopropanol (2mL) was
added, stirred for 10 min and then added to a saturated solution of sodium sulfate
(50mL). The mixture was diluted with DCM (100 mL) and then stirred for 1h. The organic
phase was separated and the aqueous was extracted with DCM. The combined organic extracts
were dried and filtered. The crude product was purified via silica chromatography
(10% MeOH/DCM) to give the subtitle compound as a cream solid, 2.2 g.
LC/MS m/z 331 APCI+
- (iv) N4-Butyl-5-(4-(chloromethyl)-2-methoxybenzyl)-6-methylpyrimidine-2,4-diamine
The product from step (iii) (2.2 g) in DCM (100mL) was cooled to 0°C and SOCl2 (0.486ml) was added dropwise. The reaction was allowed to warm up to rt over 1hr,
and poured cautiously into sat. NaHCO3 and the aqueous phase was separated. The organic phase was dried, filtered and the
solvent evaporated under reduced pressure to give the subtitle compound as a yellow
solid, 2.260 g.
LC/MS m/z 349 APCI+
- (v) 2-(4-((2-Amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)-3-methoxyphenyl)acetonitrile
KCN (0.844g) was added to a stirred solution of the product from step (iv) (2.78g)
in DMF (10mL) and DMSO (10mL). The mixture was stirred at rt for 15h. The reaction
mixture was diluted with EtOAc (100 mL) and sat. NaHCO3 (100 mL). The organic phase was separated, dried and solvent removed to give the
subtitle compound as a solid, 2.2g.
LC/MS m/z 340 APCI+
- (vi) 2-(4-((2-Amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)-3-methoxyphenyl)acetic
acid
The product from step (v) (2.1g) was dissolved in butan-1-ol (20mL) and aq. 5M KOH
(3.71 ml) was added and the mixture was heated at 100°C for 36h. The mixture was allowed
to cool and the solvent was evaporated under reduced pressure. The residue was diluted
with water (5mL) and the pH adjusted to ∼ 7 using conc HCl. The resulting precipitate
was collected by filtration and the solid was then suspended in MeCN (10mL) for 10min.
The suspension was filtered and the solid dried under vacuum overnight to give the
subtitle compound as as a white solid, 2.60 g.
LC/MS m/z 359 APCI+
- (vii) 2-Hydroxyethyl 2-(4-((2-amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)-3-methoxyphenyl)acetate
The product from step (vi) (100mg), ethane-1,2-diol (0.031ml) and Hunig's Base (0.146ml)
were combined in DMF (5mL) and HATU (106mg) was added and stirred at rt for 1 h. The
reaction mixture was purified by RPHPLC to give the title compound as a solid, 6mg.
1H NMR DMSO d-6: δ 6.91 (s, 1H), 6.72 (d, 1H), 6.64 (d, 1H), 6.02 - 5.92 (m, 1H), 5.69
- 5.57 (m, 2H), 4.80 (t, 1H), 4.04 (t, 2H), 3.84 (s, 3H), 3.62 (s, 1H), 3.59 - 3.54
(m, 3H), 3.26 - 3.18 (m, 2H), 1.96 (s, 3H), 1.50 - 1.33 (m, 2H), 1.28 - 1.09 (m, 4H),
0.84 (t, 3H) LC-MS m/z 403 multimode +
Example 90
4-(4-(Dimethylamino)piperidin-1-yl)butyl 2-(4-((2-amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)-3-methoxyphenyl)acetate,
saccharin salt
[0309]

[0310] The title compound was prepared using the method of example 89 step (vii), using
the product of example 89 step (vi) (150mg) and 4-(4-(dimethylamino)piperidin-1-yl)butan-1-ol
(168mg). The saccharin salt was prepared to give the title compound as a white solid,
43mg.
1H NMR DMSO d-6: δ 7.66 - 7.54 (m, 5H), 6.90 (s, 1H), 6.75 - 6.66 (m, 2H), 6.64 - 6.49
(m, 1H), 6.28 - 6.13 (m, 2H), 4.03 (t, 2H), 3.83 (s, 3H), 3.61 (s, 3H), 3.31 - 3.23
(m, 2H), 2.96 - 2.87 (m, 2H), 2.44 (s, 5H), 2.35 - 2.26 (m, 2H), 2.02 (s, 3H), 1.99
- 1.85 (m, 2H), 1.85 - 1.77 (m, 2H), 1.60 - 1.51 (m, 2H), 1.49 - 1.37 (m, 6H), 1.27
- 1.13 (m, 3H), 0.84 (t, 3H)
LC-MS m/z 541 multimode +
Example 91
4-Hydroxybutyl 2-(4-((2-amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)-3-methoxyphenyl)acetate,
saccharin salt
[0311]

[0312] The title compound was prepared using the method of example 89 step (vii) and the
product of example 89 step (vi) (150mg) and butane-1,4-diol (75mg). The saccharin
salt was formed with one equivalent of saccharin in MeCN, to give the title compound,
30mg.
1H NMR DMSO d-6: δ 11.93 - 11.81 (m, 1H), 7.87(t, 1H), 7.68 - 7.54 (m, 5H), 7.43-7.28
(m, 2H), 6.93 (s, 1H), 6.74(s, 2H), 4.44 - 4.38 (m, 1H), 4.07 - 3.98 (m, 2H), 3.83
(s, 3H), 3.69 - 3.58 (m, 4H), 3.41 - 3.35 (m, 3H), 2.11 (s, 3H), 1.64 - 1.53 (m, 2H),
1.52 - 1.38 (m, 4H), 1.26 - 1.14 (m, 2H), 0.85 (t, 3H)
LC-MS m/z 431 multimode +
Example 92
3-(Methylsulfonyl)propyl 2-(4-((2-amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)-3-methoxyphenyl)acetate
[0313]

[0314] The title compound was prepared using the method of example 89 step (vii), using
the product of example 89 step (vi) (150mg) and 3-(methylsulfonyl)propan-1-ol (116mg),
to give the title compound as a gum, 6.3mg.
1H NMR DMSO d-6: δ 6.90 (d, 1H), 6.72 (dd, 1H), 6.65 (d, 1H), 6.02 - 5.95 (m, 1H),
5.66 - 5.61 (m, 2H), 4.15 - 4.08 (m, 2H), 3.84(s, 3H), 3.63(s, 2H), 3.58(s, 2H), 3.26
- 3.19 (m, 2H), 3.17 - 3.09 (m, 2H), 2.96 (s, 3H), 2.05 - 1.97 (m, 2H), 1.97 (s, 3H),
1.46 - 1.34 (m, 2H), 1.26 - 1.14 (m, 2H), 0.84 (t, 3H)
LC-MS m/z 479 multimode +
Example 93
3-Hydroxypropyl 2-(4-((2-amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)-3-methoxyphenyl)acetate,
saccharin salt
[0315]

[0316] The title compound was prepared using the method of example 89 (step vii) and the
product of example 89 step (vi) (150mg) and propane-1,3-diol (63mg). The saccharin
salt was formed with one equivalent of saccharin in MeCN, to give the title compound,
30.6mg.
1H NMR DMSO d-6: δ 11.84 (s, 1H), 7.93 - 7.85 (m, 1H), 7.67 - 7.61 (m, 1H), 7.60 -
7.53 (m, 4H), 7.39 - 7.32 (m, 1H), 6.93(s, 1H), 6.74(s, 2H), 4.53 - 4.46(m, 1H), 4.10
- 4.03 (m, 2H), 3.83 (s, 3H), 3.68(s, 2H), 3.62 (s, 2H), 3.47 - 3.35(m, 2H), 2.10(s,
3H), 1.77 - 1.65 (m, 2H), 1.52 - 1.40 (m, 2H), 1.24 - 1.13 (m, 2H), 0.85 (t, 3H)
LC-MS m/z 417 multimode +
Example 94
(S)-4-(Dimethylamino)butyl 2-(4-((2-amino-4-(1-hydroxyhexan-3-ylamino)-6-methylpyrimidin-5-yl)methyl)phenyl)acetate,
bis saccharin salt
[0317]
- (i) (S)-2-(4-((2-Amino-4-(1-hydroxyhexan-3-ylamino)-6-methylpyrimidin-5-yl)methyl)phenyl)acetic
acid
A mixture of the product of example 81 step (iii) (0.4g) and (S)-3-aminohexan-1-ol
(0.5g) in butan-1-ol (3 mL) was sealed into a microwave tube. The reaction was performed
in the CEM Microwave, at 160°C and 100W for 1.5h. Aq. 5M KOH (1ml) was added and the
mixture heated at 100°C for 48h. The mixture was cooled and the solvent evaporated
under reduced pressure. The residue was purified by RPHPLC to give the subtitle compound,
174mg.
LC/MS m/z 373 APCI+
- (ii) (S)-4-(Dimethylamino)butyl2-(4-((2-amino-4-(1-hydroxyhexan-3-ylamino)-6-methylpyrimidin-5-yl)methyl)phenyl)acetate,
bis saccharin salt
HATU (0.193g) was added to a stirred solution of the product from step (i) (0.172g),
4-(dimethylamino)butan-1-ol (0.216g) and Hunig base (0.25ml) in DMF (6ml) at rt. The
mixture was stirred at rt for 3h then purified by RPHPLC to give a gum, 130mg. The
gum was dissolved in MeCN (4ml) and saccharin (100mg) added and the solvent evaporated
under reduced pressure to give the title compound as a solid, 230mg.
1H NMR DMSO-d6/D2O: δ 7.68-7.58 (m, 8H), 7.19 (d, 2H), 7.11 (d, 2H), 4.37-4.30 (m,
1H), 4.04 (t, 2H), 3.90-3.80 (m, 2H), 3.63 (s, 2H), 3.37-3.29 (m, 2H), 3.06-3.02 (m,
2H), 2.76 (s, 6H), 2.20 (s, 3H), 1.66-1.58 (m, 6H), 1.46-1.40 (m, 2H), 1.09-1.04 (m,
2H), 0.77 (t, 3H)
LC-MS m/z 472 multimode +
Example 95
(1-Methylpiperidin-4-yl)methyl 2-(4-(2-amino-4-(butylamino)-6-methylpyrimidin-5-ylthio)phenyl)acetate,
saccharin salt
[0318]
- (i) 2-Amino-5-(4-(hydroxymethyl)phenylthio)-6-methylpyrimidin-4-ol
A stirred mixture of (4-mercaptophenyl)methanol (6.72g), 2-amino-5-bromo-6-methylpyrimidin-4-ol
(10.76g) and K2CO3 (7.29g) in ethylene glycol (120ml) was heated at 155°C for 9h. After cooling the
mixture was poured into water (500ml) and neutralised with conc. HCl. The precipitate
was filtered, washed with water then 50% EtOH/ether and dried to give the subtitle
compound as a solid, 6.7g.
1H NMR DMSO-d6: δ11.07 (brs, 1H) ; 7.18 (d, 2H) ; 6.99 (d, 2H) ; 6.87 (brs, 2H) ; 5.09
(s, 1H) ; 4.41 (s, 2H) ; 2.24 (s, 3H)
LC/MS m/z 264 APCI+
- (ii) 2-Amino-5-(4-(chloromethyl)phenylthio)-6-methylpyrimidin-4-ol
SOCl2 (20ml) was added slowly to a stirred mixture of the product from step (i) (6.7g)
in DCM (50ml) and stirred at rt for 24h. The solvent was evaporated under reduced
pressure to give the title compound, 8.7g.
LC/MS m/z 282 APCI+
- (iii) 2-(4-(2-Amino-4-hydroxy-6-methylpyrimidin-5-ylthio)phenyl)acetonitrile
A mixture of the product from step (ii) (8.7g) and KCN (8.28g) in DMF (20ml) and DMSO
(20ml) was stirred at rt for 2h then 50°C for 2h. Water (150ml) was added and stirred
for 30min. The solid obtained was filtered off and added to MeOH (150ml), heated to
reflux for 5min then hot filtered and allowed to cool to rt. The precipitate was filtered
and dried under high vacuum at 45°C, to give the subtitle compound as a brown solid,
2.3g.
LC/MS m/z 273 APCI+
- (iv) 2-(4-(2-Amino-4-chloro-6-methylpyrimidin-5-ylthio)phenyl)acetonitrile
A mixture of the product from step (iii) (2.3g) and POCl3 (25ml) was heated under reflux for 8h. The mixture was evaporated under reduced pressure
and ice/water added to the residue. The mixture was stirred at rt for 15min then neutralised
with aq. 2M NaOH solution and heated at 40°C for 2h then extracted with DCM. The organics
were dried, evaporated under reduced pressure and the residue purified by column chromatography
( 2% MeOH/DCM), to give the subtitle compound as a solid, 530mg.
1H NMR CDCl3: δ 7.22 (d, 2H) ; 7.07 (d, 2H) ; 5.36 (s, 2H) ; 3.70 (s, 2H) ; 2.50 (s, 3H) LC/MS
m/z 291 APCI+
- (v) 2-(4-(2-Amino-4-(butylamino)-6-methylpyrimidin-5-ylthio)phenyl)acetonitrile
A mixture of the product from step (iv) (525mg) and butylamine (3ml) in BuOH (14ml)
was heated under reflux for 5h. The solvent was evaporated under reduced pressure
and the residue partitioned between EtOAc/water. The organics were separated, dried
and evaporated under reduced pressure to give the subtitle compound as a gum, 610mg.
LC/MS m/z 328 APCI+
- (vi) 2-(4-(2-Amino-4-(butylamino)-6-methylpyrimidin-5-ylthio)phenyl)acetic acid
A mixture of the product from step (v) (610mg) and aq. 5M KOH (2ml) in EtOH (8ml)
was heated under reflux for 18h. The mixture was purified by RPHPLC to give the subtitle
compound as a solid, 392mg.
1H NMR DMSO-d6: δ7.09 (d, 2H); 6.87 (d, 2H) ; 6.54 (t, 1H) ; 6.30 (s, 2H) ; 3.29-3.24
(m, 2H) ; 3.20 (s, 2H) ; 2.19 (s, 3H) ; 1.45-1.38 (m, 2H) ; 1.23-1.13 (m, 2H) ; 0.82
(t, 3H)
LC/MS m/z 347 APCI+
- (vii) (1-Methylpiperidin-4-yl)methyl 2-(4-(2-amino-4-(butylamino)-6-methylpyrimidin-5-ylthio)phenyl)acetate,
saccharin salt
HATU (0.209g) was added to a stirred mixture of the product from step (vi) (0.19g),
(1-methylpiperidin-4-yl)methanol (0.142g), and Hunig's base (0.3ml) in DMF (6ml) at
rt. The mixture was stirred for 24h then purified by RPHPLC, to give a gum (130mg).
The gum was dissolved in MeCN (5ml) and saccharin (52mg) added and the solution evaporated
under reduced pressure, triturated with ether and filtered to give the title compound
as a solid, 173mg.
1H NMR DMSO-d6: δ 7.65-7.56 (m, 4H) ; 7.17 (d, 2H) ; 6.98 (d, 2H) ; 6.70 (s, 1H) ;
6.43 (s 2H) ; 3.93 (d, 2H) ; 3.62 (s, 2H) ; 3.31-3.23 (m, 2H) ; 2.91-2.81 (brm, 2H)
; 2.71 (s, 3H) ; 2.20 (s, 3H) ; 1.85-1.75 (m, 3H) ; 1.45-1.33 (m, 4H) ; 1.20-1.11
(m, 2H) ; 0.81 (t, 3H)
LC-MS m/z 458 multimode +
Example 96
4-(Pyrrolidin-1-yl)butyl 2-(4-(2-amino-4-(butylamino)-6-methylpyrimidin-5-ylthio)phenyl)acetate,
saccharin salt
[0319]

[0320] The title compound was prepared via the method of example 95, using the product of
step (vi) (180mg) and 4-(pyrrolidin-1-yl)butan-1-ol (149mg), to give a solid, 189mg.
1H NMR DMSO-d6: δ 7.65-7.55 (m, 4H) ; 7.17 (d, 2H) ; 6.97 (d, 2H) ; 6.66 (s, 1H) ;
6.41 (s, 2H) ; 4.04 (t, 2H) ; 3.61 (s, 2H) ; 3.27 (m, 2H) ; 3.08 (brm, 2H) ; 2.20
(s, 3H) ; 1.91 (s, 4H); 1.65-1.58 (m, 4H); 1.44-1.37 (m, 2H); 1.20-1.07 (m, 2H); 0.81
(t, 3H)
LC-MS m/z 472 multimode +
Example 97
4-(Dimethylamino)butyl 2-(3-((2-amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)-4-methoxyphenyl)acetate,
saccharin salt
[0321]

[0322] HATU (382 mg) was added to a stirred solution of the product from example 83 step
(iv) (300 mg), 4-(dimethylamino)-1-butanol (196mg) and triethylamine (0.233ml) in
DMF (3mL). The mixture was stirred at rt for 1h and then diluted with MeCN (2mL) and
purified via RPHPLC. The purified product was dissolved in MeCN (1mL) and saccharin
(14.84mg) was added and the solution was stirred for 10min. The solvent was evaporated
under reduced pressure and the residue was triturated with diethyl ether to give the
title compound as a white solid, 31 mg.
1H NMR DMSO-d6: δ 7.66 - 7.55 (m, 7H), 7.10 (dd, 1H), 6.96 (d, 1H), 6.72 (d 1H), 4.00
(t, 2H), 3.83(s, 3H), 3.68(s, 2H), 3.53 (s, 2H), 3.42 - 3.33(m, 2H), 3.02 - 2.93 (m,
2H), 2.71 (s, 6H), 2.10 (s, 3H), 1.68 - 1.51 (m, 4H), 1.47 (q, 2H), 1.27 - 1.15 (m,
2H), 0.85 (t, 3H)
LC-MS m/z 458 multimode +
Example 98
Methyl 2-(3-((2-amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)-4-methoxyphenyl)acetate
[0323]

[0324] A solution of boron tribromide (13.95ml, 1M in DCM) was added portionwise over 30min
to a stirred suspension of the product from example 83 step (iv) (1g) in DCM (15mL)
at 0 °C. The suspension was allowed to warm to rt and stirred for 5h. The suspension
was cooled to 0°C and then MeOH (10mL) and 4M HCl in dioxane (2mL) were added and
the mixture stirred for 1h. The solvent was evaporated under reduced pressure and
the residue was purified by flash silica chromatography (5% MeOH/DCM) to give the
title compound (minor product) as a white solid, 51 mg.
1H NMR DMSO-d6: δ 9.81 (s, 1H), 7.51 (s, 1H), 6.99 (s, 2H), 6.92 (dd, 1H), 6.79 (d,
1H), 6.70 (d, 1H), 3.63 (s, 2H), 3.55 (s, 3H), 3.47 (s, 2H), 3.38 - 3.33 (m, 2H),
2.16 (s, 3H), 1.53 - 1.41 (m, 2H), 1.28 - 1.16 (m, 2H), 0.85 (t, 3H)
LC-MS m/z 373 multimode +
Example 99
Methyl 2-(3-((2-amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)-4-hydroxyphenyl)acetate
[0325]

[0326] A solution of boron tribromide (2.51ml, 1M in DCM) was added portionwise over 30min
to a stirred suspension of the product from example 83 step (iv) (300mg) in DCM (5mL)
at 0 °C. The suspension was allowed to warm to rt and stirred for 3h. A further portion
of boron tribromide (1.674ml, 1M in DCM) was added and the mixture stirred at rt for
a further 2h. MeOH (2mL) and 4M HCl in dioxane (2mL) were added and the mixture stirred
for 1h. The solvent was evaporated under reduced pressure and the residue purified
by RPHPLC, to give the title compound as a white solid, 27 mg.
1H NMR DMSO-d6: δ 9.65 (s, 1H), 6.87 (dd, 1H), 6.76 (d, 1H), 6.66 (d, 1H), 6.05 (t,
1H), 5.61 (s, 2H), 3.56(s, 2H), 3.54 (s, 3H), 3.43 (s, 2H), 3.26 - 3.20 (m, 2H), 2.06
(s, 3H), 1.43 (q, 2H), 1.21 (sextet, , 2H), 0.84 (t, 3H)
LC-MS m/z 359 multimode +
Example 100
(S)-2-(1-Methylpiperidin-4-yl)ethyl 2-(4-((2-amino-4-(1-hydroxyhexan-3-ylamino)-6-methylpyrimidin-5-yl)methyl)-3-fluorophenyl)acetate,
saccharin salt
[0327]

[0328] HATU (175mg) was added to a stirred solution of the product from example 74 step
(ii) (150 mg), 2-(1-methylpiperidin-4-yl)ethanol (110mg) and triethylamine (0.107ml)
in DMF (2 ml). The mixture was stirred at rt for 1h and then diluted with MeCN (3ml).
The solution was purified by RPHPLC, the resulting gum was dissolved in MeCN (0.5mL)
and saccharin (11.72mg) was added and the solvent evaporated. The residue was triturated
with diethyl ether to give the title compound as a solid, 22 mg.
1H NMR DMSO-d6: δ 7.67 - 7.55 (m, 5H), 7.12 (d, 1H), 6.99 (d, 1H), 6.92 - 6.82 (m,
3H), 4.41 - 4.29 (m, 2H), 4.11 - 4.04 (m, 2H), 3.81 (s, 2H), 3.67 (s, 2H), 3.42 -
3.37 (m, 2H), 2.80 - 2.69 (m, 2H), 2.67 (s, 3H), 2.08 (s, 3H), 1.84 - 1.75 (m, 2H),
1.67 - 1.49 (m, 6H), 1.48 - 1.38 (m, 2H), 1.37 - 1.06 (m, 6H), 0.81 (t, 3H)
LC-MS m/z 516 multimode +
Example 101
2-(4-Methylthiazol-5-yl)ethyl 2-(4-((2-amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)-3-methoxyphenyl)acetate
[0329]

The title compound was prepared using the method of example 89 step (vii), using the
product of example 89 step (vi) (150mg) and 2-(4-methylthiazol-5-yl)ethanol (60mg)
to give the title compound as a gum, 10mg.
1H NMR DMSO-d6: δ 8.80 (s, 1H), 6.84 (d, 1H), 6.69 - 6.58 (m, 2H), 5.98 (t, 1H), 5.64
(s, 2H), 4.18 (t, 2H), 3.81 (s, 3H), 3.59 (d, 4H), 3.27 - 3.16 (m, 2H), 3.07 (t, 2H),
2.27 (s, 3H), 1.99 (d, 3H), 1.44 - 1.34 (m, 2H), 1.28 - 1.11 (m, 2H), 0.83 (t, 3H)
LC-MS m/z 484 multimode +
Example 102
4-(Dimethylamino)butyl 2-(4-((2-amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)-3-hydroxyphenyl)acetate
[0330]

[0331] The title compound was prepared using product of example 79 step (i) (80 mg) and
4-(dimethylamino)butan-1-ol using the general coupling method of example 74 step (iii).
The product was purified by RPHPLC to give the product, 25 mg.
1H NMR DMSO-d6: δ 6.73 - 6.64 (m, 2H), 6.54 - 6.46 (m, 1H), 5.57 (s, 2H), 4.00 (t,
2H), 3.54 (s, 2H), 3.49 - 3.40 (m, 2H), 3.26 - 3.16 (m, 4H), 2.19 - 2.11 (m, 2H),
2.07 (s, 6H), 1.60 - 1.48 (m, 2H), 1.47 - 1.28 (m, 4H), 1.26 - 1.14 (m, 3H), 0.83
(t, 3H)
LC-MS m/z 444 APCI +
Example 103
(1-Methylpiperidin-4-yl)methyl 2-(4-((2-amino-4-(butylamino)-6-methylpyrimidin-5-yl)methyl)-3-hydroxyphenyl)acetate,
di-trifluoroacetic acid salt
[0332]

[0333] The title compound was prepared using product of example 79 step (i) (90 mg) and
(1-methylpiperidin-4-yl)methanol using the general coupling method of example 74 step
(iii). The product was purified by RPHPLC to give the product, 15.4 mg.
1H NMR DMSO-d6: δ 12.32 - 12.11 (m, 1H), 10.04 - 9.86 (m, 1H), 9.40 - 9.18 (m, 1H),
7.92 - 7.78 (m, 1H), 7.57 - 7.42 (m, 2H), 6.80 - 6.69 (m, 2H), 6.65 - 6.54 (m, 1H),
3.91 (s, 2H), 3.63(s, 2H), 3.55 (s, 2H), 3.45 - 3.29 (m, 4H), 2.97 - 2.79 (m, 3H),
2.79 - 2.70 (m, 3H), 2.18 (s, 3H), 1.90 - 1.76 (m, 2H), 1.52 - 1.29 (m, 4H), 1.27
- 1.14 (m, 2H), 0.85 (t, 3H)
LC-MS m/z 456 APCI +
Biological Assay
Human TLR7 assay
[0334] Recombinant human TLR7 was stably expressed in a HEK293 cell line already stably
expressing the pNiFty2-SEAP reporter plasmid; integration of the reporter gene was
maintained by selection with the antibiotic zeocin. The most common variant sequence
of human TLR7 (represented by the EMBL sequence AF240467) was cloned into the mammalian
cell expression vector pUNO and transfected into this reporter cell-line. Transfectants
with stable expression were selected using the antibiotic blasticidin. In this reporter
cell-line, expression of secreted alkaline phosphatase (SEAP) is controlled by an
NFkB/ELAM-1 composite promoter comprising five NFkB sites combined with the proximal
ELAM-1 promoter. TLR signaling leads to the translocation of NFkB and activation of
the promoter results in expression of the SEAP gene. TLR7-specific activation was
assessed by determining the level of SEAP produced following overnight incubation
of the cells at 37°C with the standard compound in the presence of 0.1%(v/v) dimethylsulfoxide
(DMSO). Concentration dependent induction of SEAP production by compounds was expressed
as the concentration of compound which produced half of the maximal level of SEAP
induction for that compound (pEC50). The results obtained are shown in Table 1 following.
Table 1
| Compound of Ex. No. |
pEC50 |
Compound of Ex. No. |
pEC50 |
| 1 |
6.3 |
2 |
6.0 |
| 3 |
6.2 |
4 |
6.4 |
| 5 |
6.2 |
6 |
5.9 |
| 7 |
5.6 |
8 |
5.6 |
| 9 |
5.4 |
10 |
5.8 |
| 11 |
6.0 |
12 |
5.8 |
| 13 |
5.6 |
14 |
5.9 |
| 15 |
6.4 |
16 |
5.8 |
| 17 |
6.0 |
18 |
5.8 |
| 19 |
5.6 |
20 |
5.7 |
| 21 |
7.8 |
22 |
6.2 |
| 23 |
6.0 |
24 |
6.0 |
| 25 |
6.1 |
26 |
6.1 |
| 27 |
5.7 |
28 |
5.9 |
| 29 |
6.1 |
30 |
7.5 |
| 31 |
8.2 |
32 |
7.3 |
| 33 |
7.3 |
34 |
6.4 |
| 35 |
6.6 |
36 |
6.6 |
| 37 |
6.9 |
38 |
6.9 |
| 39 |
7.0 |
40 |
6.9 |
| 41 |
6.0 |
42 |
6.2 |
| 43 |
6.1 |
44 |
6.2 |
| 45 |
7.3 |
46 |
7.6 |
| 47 |
6.3 |
48 |
8.7 |
| 49 |
6.7 |
50 |
6.8 |
| 51 |
6.1 |
52 |
6.2 |
| 53 |
7.4 |
54 |
7.1 |
| 55 |
6.9 |
56 |
6.6 |
| 57 |
6.9 |
58 |
6.9 |
| 59 |
6.9 |
60 |
6.7 |
| 61 |
6.9 |
62 |
6.7 |
| 63 |
6.8 |
64 |
5.6 |
| 65 |
6.5 |
66 |
6.8 |
| 67 |
6.1 |
68 |
6.2 |
| 69 |
6.9 |
70 |
5.9 |
| 71 |
7.7 |
72 |
7.8 |
| 73 |
8.3 |
74 |
7.4 |
| 75 |
8.2 |
76 |
6.2 |
| 77 |
7.2 |
78 |
7.3 |
| 79 |
6.9 |
80 |
7.7 |
| 81 |
6.0 |
82 |
7.0 |
| 83 |
7.7 |
84 |
6.5 |
| 85 |
6.3 |
86 |
6.7 |
| 87 |
7.6 |
88 |
7.0 |
| 89 |
7.3 |
90 |
7.6 |
| 91 |
7.7 |
92 |
7.7 |
| 93 |
7.7 |
94 |
6.9 |
| 95 |
7.2 |
96 |
7.3 |
| 97 |
7.5 |
98 |
7.3 |
| 99 |
7.1 |
100 |
7.5 |
| 101 |
7.4 |
102 |
7.0 |
| 103 |
6.9 |
|
|