BACKGROUND OF THE INVENTION
Field of the invention
[0001] The present invention relates to a method of producing large-scale quantities of
biologics. In particular, the present invention relates to a scaled-up process of
manufacturing a primary cell derived biologic.
Description of related art
[0002] There are various methods in the art used to produce biologics from cells which generally
involve the steps of stimulating cells through incubation and washing cells to obtain
the desired product.
[0003] For example,
U.S. Patent No. 4,390,623 to Fabricius discloses a serum-free and mitogen-free T-cell growth factor (interleukin-2) preparation
prepared from human, bovine, or porcine peripheral mononuclear blood cells which are
washed several times with a liquid tissue culture medium and then stimulated in tissue
culture medium supplemented with serum and mitogen. The separated stimulated cells
are again washed with fresh tissue culture medium to remove substantially all of the
serum and mitogen. The washed cells are suspended in fresh tissue culture medium and
conditioned under incubation conditions to transfer the growth factor into the liquid.
The tissue culture medium separated from the stimulated cells can be recycled to stimulate
additional cells. The supernatant can be concentrated from 50 to 100-fold on an ultrafilter.
[0004] U.S. Patent No. 4,406,830 to Fabricius discloses a process for producing serum-free, mitogen-free Interleukin-1 (II-1) (also
known as lymphocyte activating factor LAF) and serum-free, mitogen-free II-2 by incubating
peripheral mononuclear blood (PBL) cells in a serum-free liquid tissue culture medium
to remove residual serum proteins on the surfaces of the PBL cells, activating the
incubated cells with a mitogen, washing the activated cells with a sterile liquid
to remove the mitogen from the cells and conditioning the serum-free mitogen-free
activated cells in a liquid tissue culture medium to produce a serum-free, mitogen-free
Interleukin-1 (IL-1), contacting the IL-1 containing liquid tissue culture medium
with novel blood serum glycoprotein, and incubating the cells in the presence of IL-1
and the novel blood serum glycoprotein to induce synthesis of IL-2 and to transfer
the IL-2 (T-cell growth factor) from the cells to the liquid phase of the tissue culture
medium to thereby produce a serum-free, mitogen-free IL-2.
[0005] U.S. Patent No. 5,503,828 to Testa discloses a method of large-scale production of alpha interferon through induction
and purification. A mixture of alpha interferon subtypes produced from peripheral
blood leukocytes is produced by (a) preparing human peripheral blood leukocytes by
collecting buffy coats and lysing red blood cells with ammonium chloride; (b) suspending
leukocytes at a cell density of 1-10x106 cells/ml in an induction medium, comprising
Eagle's MEM containing Earle's Salts, L-glutamine, non-essential amino acids, 4.46
mg/ml Tricine, pH 7.4, 24 µg/ml neomycin sulfate, vitamins B3 and/or C, sodium bicarbonate,
and between 0.1 to 1.5 mg/ml human agamma serum; (c) adding crude or purified alpha
interferon as a primer to the leukocytes suspended in the induction medium; (d) incubating
the suspension for a sufficient time at about 36 degrees C while stirring at 100-300
rpm; (e) adding between 50-500 hemagglutinin units per ml of Sendai virus to the suspension;
(f) incubating for a sufficient time at about 36 degrees C while stirring at 100-300
rpm; (h) centrifuging at about 2,500 rpm to remove cells and debris; and (i) collecting
crude alpha interferon as product, without ever separating one alpha interferon subtype
from the other subtypes present in the alpha mixture.
[0006] U.S. Patent No. 6,350,589 to Morris discloses a method of producing multisubtype Type 1 interferons. The method includes
the steps of (a) culturing leukocytes; (b) stimulating the leukocytes to produce a
crude interferon; (c) concentrating the crude interferon to remove low-molecular weight
contaminants; (d) liquid volume to produce a concentrated crude interferon; (e) removing
a substantial amount of serum albumin and other contaminants from the concentrated
crude interferon to produce a partially purified interferon mixture containing a plurality
of subtypes; (f) removing substantially all remaining serum albumin and other contaminants
from the partially purified interferon mixture to generate an interferon mixture having
a purity of between about 50% and about 80%; and (g) purifying the about 50% to about
80% interferon mixture to produce a highly purified mixture of Type I interferon having
a purity of at least about 95% and containing no more than about 35% by weight IFN.alpha.-2
and IFN .alpha.-8 subtypes.
[0007] U.S. Patent No. 6,896,879 to Talor discloses a method of producing a cytokine mixture that is serum-free, mitogen-free,
and antibiotic-free. In the manufacturing process, mononuclear cells are separated
from human donor "buffy coats" by step-gradient centrifugation and cultured with phytohemagglutinin
(PHA) to enhance production and secretion of IL-2 and other cytokines from the donor
white blood cells in culture. Subsequently, the culture supernatant is aseptically
harvested, clarified and subjected to a commercial virus exclusion process. The supernatant
is then further concentrated approximately 10 fold by ultrafiltration and microfiltration.
At this point, Human Serum Albumin, Inj. USP is added and the concentrate is then
buffered to a physiological pH and brought to a target IL-2 concentration per the
label claim (example 400 IU/mL). The concentrate is then subjected to a second micro-filtration
(0.22 micron-rated filter) and aseptically dispensed into sterile serum-type vials
and labeled by its IL-2 content. Product potency is measured by the incorporation
of radio-labeled thymidine by a cytotoxic T-lymphoid line (CTLL-2). The final injectable
agent is further tested by ELISA for the presence of five marker cytokines: IL-2,
IL-10, GM-CSF, IFN-γ, and TNF-α.
[0008] U.S. Patent Nos. 5,632,983;
5.698.194;
6,977,072;
7,153,499;
7,182,942 to Hadden disclose a method of producing a natural cytokine mixture (NCM) that is a unique
cytokine mixture of IL-1β, IL-2, IL-6, IL-8, INF-γ, and TNF-α. Buffy coat white cells
of human blood from multiple HIV-negative hepatitis virus-negative donors are collected.
The cells from the donors are pooled and layered on ficoll hypaque gradients (Pharmacia)
to yield lymphocytes free of neutrophils and erythrocytes. In a preferred embodiment
for the production of NCM lymphocytes are washed and distributed in X vivo-10 media
(Whittaker Bioproducts) to flasks (MicroCELLector.TM. T-25 Cell Culture Flasks) in
which are immobilized stimulants, i.e. mitogens. The immobilization process for the
stimulants is as described by the manufacturer for immobilizing various substances
for panning procedures, i.e. separating cells, in the flasks. The cells are incubated
for 24-48 hours in X vivo-10 media with 80 µg/ml ciprofloxacin (Miles Lab) at 37 degrees
C in a CO2/air incubator. Following incubation the supernatants are poured off and
collected. Human serum albumin (HSA) can be added to stabilize the interleukins. Generally
the HSA is used at 0.1 to 0.5% (weight by volume). The supernatants are stored at
4 degrees C to -70 degrees C. The pooled supernatants are characterized by measuring
the cytokine content by bioassay for IL-2 and ELISAs for one or more of the interleukins
IL-1-IL-15, CSFs, TNFs, and IFNs. Sterility is tested by culture in thioglycolate
broth and endotoxin measured by limulus lysate assay as is known in the art. Each
supernatant is standardized either by concentration or amount administered so that
comparisons can be made. In particular the IL-2 equivalence for each supernatant is
utilized. DNA and virus exclusion, if used, employs such techniques as ultrafiltration,
ethanol fractionation, polyethylene glycol/bentonite precipitation, and/or solvent/detergent
treatment as has been used for intravenous gamma globulin (IGIV News Update brochure).
Photochemical inactivation, aluminum phthalocyanine, or gamma irradiation can be used.
This process is further discussed in the present invention below.
[0009] There are several limitations of manual processes used for producing biologics such
as operator sensitivity, potential for contamination in an open system, inconsistent
ratios and total protein levels in the final product, all of which make the product
unsuitable for pharmaceutical grade production. To deal with these problems in the
past, cumbersome procedures were performed such as filters, starch, manual centrifugations,
and washes. Previous processes were bench top procedures that produced inconsistent
batches and small-scale quantities of product.
[0010] Another step in biologics processing that must be considered is the removal of viruses.
Patient safety is paramount, and in biotechnology processes there is a risk of adventitious
viruses contaminating the incoming cells. Accordingly, inactivation and removal steps
are sought to remove viruses that may or may not be present. Several logs of clearance/inactivation
are required, per FDA and ICH guidances. Regulatory agencies suggest testing of the
unprocessed bulk for potential viruses as well including in the process methods which
provide a minimum of 4 log 10 of virus inactivation/removal to be considered significant.
It is suggested the methods include two (or more) orthogonal steps preferably with
one targeting non-enveloped viruses. The regulatory guidance suggests that validation
studies should be conducted to characterize the ability of production methods to remove/inactivate
adventitious viruses exhibiting a range of biochemical and biophysical properties
to characterize the robustness of the process.
[0011] For primary cell derived biologic production donor leukocytes, source cells for cytokine
production, are screened by the blood centers for presence of viral nucleic acid by
PCR (NHCV and NHIV) and traditional viral antigens (human immunodeficiency virus (HIV),
hepatitis C (HCV), hepatitis B (HBV) and human T-lymphotropic virus (HTLV)). However
other viruses, Epstein Barr (EBV), Cytomegalovirus (CMV) and Human Parvovirus B-19
(B-19) may still be present in qualified donors and used for production. Detectable
levels of EBV could be present in up to 100% of healthy donors (Walling et. al., 2003).
B-19 levels in asymptomatic individuals have been reported to be greater than 1012
per mL (Doyle and Corcoran, 2006) and infection results in a brief period of viraemia
with titers as high as 1014 per mL (Anderson 1985). Due to the extensive cell washing
used in the primary cell derived biologic process, most plasma associated viruses
are essentially removed from the donor leukocytes, and any virus detected virus in
the primary cell derived biologic bulk, prior to downstream removal/inactivation steps,
would only be those released from infected cells.
[0012] Nevertheless, robust inactivation/removal processes are required to assure product
safety.
The known manual production process for the primary cell derived biologic is labour
intensive and not readily amenable to scale-up; it is limited to volumes of sterile
fluid which could be handled by a manual process. Therefore, process development is
sought to reduce manual manipulations, and achieve practicality for commercialization.
BRIEF SUMMARY OF THE INVENTION
[0013] A known method of making and purifying a primary cell derived biologic containing
the cytokines IL-1β, IL-2 and IFN-γ includes the steps of
- (a) removing contaminated cells from mononuclear cells (MNCs), being leukocytes, by
loading the leukocytes onto lymphocyte separation medium (LSM), and washing and centrifuging
the medium ;
- (b) storing the purified MNCs;
- (c) stimulating the purified MNCs with a mitogen and ciprofloxacin in a disposable
cell culture system to produce cytokines;
- (d) removing the mitogen from the MNCs;
- (e) incubating the MNCs in a culture medium;
- (f) separating the MNCs from the culture nedium, thereby producing a supernatant;
- (g) removing DNA from the supernatant by anion exchange chromatography; and
- (h) removing viruses from the resultant chromatographed supernatant.
[0014] According to the present invention, step (a) is carried out with an automated cell
processing and washing system; step (b) is carried out overnight in a closed sterile
bag system; step (f) is carried out by filtering; and step (h) is carried out by filtering
with dual 15 nanometre filters in series. These improvements enable all the steps
to be carried out in an automated system, as will be explained in the following description.
[0015] Additional viral removal may also be used employing ultraviolet-C (UVC), as will
be described in more detail in the following description.
[0016] As indicated, the method according to the invention present invention may be carried
out in an automated method in an automated cell processor, with washing, centrifuging
the cells, and obtaining purified cells all being automatic.
[0017] Features of the present invention will be described in the following description
with reference to the accompanying drawings, in which:
FIG. 1 is a photograph of the cytokine profile of the (known) primary cell derived
biologic that was used in Phase II clinical trials;
FIG. 2 is chart comparing the manual versus the commercial scale primary cell derived
biologic process of the present invention;
FIG. 3 is a graph of the Cell population analysis of cell processor purified MNCs
versus Ac-T diff2;
FIG. 4 is a photograph of the cytokine profile of the primary cell derived biologic
that was obtained (according to the invention) in a commercial scale process;
FIG. 5 is a graph of peptide specific DTH assay for a product obtained according to
the invention (modified process) compared to one produced by the known (standard)
process;
FIG. 6 is a photograph of a Western Blot Analysis of the primary cell derived biologic
obtained according to the invention after UVC; and
FIG. 7 is a photograph of a cytokine array of the primary cell derived biologic obtained
according to the invention, before and after UVC.
DETAILED DESCRIPTION OF THE INVENTION
[0018] The present invention provides generally for a method of making large-scale quantities
of a primary cell derived biologic, preferably IRX-2, for commercial production. The
method makes novel use of several process steps that are scalable for desired product
quantity. Mononuclear cells (MNCs) are purified to remove contaminating cells by loading
leukocytes onto lymphocyte separation medium (LSM) and centrifuging the medium to
obtain purified MNCs with an automated cell processing and washing system. The MNCs
are then stored overnight in a FEP lymphocyte storage bag. An induction mixture of
the MNCs is stimulated with a mitogen, preferably phytohemagglutinin (PHA), and ciprofloxacin
in a disposable cell culture device and a primary cell derived biologic is produced
from the MNCs. The mitogen is removed from the induction mixture by filtering and
tangential flow filtration (TFF) mode, and then the induction mixture is incubated.
The induction mixture is clarified by filtering to obtain a primary cell derived biologic
supernatant. Finally, the primary cell derived biologic supernatant is cleared from
DNA and adventitious agents by applying anion exchange chromatography and 15 nanometer
filtration and optionally further inactivation by ultraviolet-C (UVC). The final product
can then be vialed and stored for future administration to a patient.
[0019] A "primary cell derived biologic", as used herein, is a set of cytokines, preferably
natural and non-recombinant cytokines, also previously known as an NCM (natural cytokine
mixture). Preferably, the primary cell derived biologic is IRX-2 as described below,
and the two terms can be used interchangeable throughout this application without
derivation from the intended meaning.
[0020] "IRX-2" is a leukocyte-derived, natural primary cell derived biologic produced by
purified human white blood cells (mononuclear cells) stimulated by phytohemagglutinin
(PHA) and ciprofloxacin (CIPRO). The major active components are interleukin 1β (IL-1β),
interleukin 2 (IL-2), and γ-interferon (IFN-γ). IRX-2 has also previously been referred
to as an "NCM", a natural cytokine mixture, defined and set forth in United States
Patent Nos.
6,977,072 and
7,153,499. Briefly, IRX-2 is prepared in the continuous presence of a 4-aminoquinolone antibiotic
and with the continuous or pulsed presence of a mitogen, which in the preferred embodiment
is PHA. However, other mitogens can also be used. According to a preferred embodiment
of the invention, the IRX-2 contains a concentration of IL-1β that ranges from 60
- 6,000 pcg/mL, more preferably, from 150 - 1,800 pcg/mL; a concentration of IL-2
that ranges from 600-60,000 pcg/mL, more preferably, from 3,000-12,000 pcg/mL, and
a concentration of IFN-γ that ranges from 200-20,000 pcg/mL, more preferably, from
1,000-4,000 pcg/mL.
[0021] IRX-2 can also contain a concentration of IL-6 that ranges from 60-6,000 pcg/mL,
more preferably, from 300-2,000 pcg/mL; a concentration of IL-8 that ranges from 6000-600,000
pcg/mL, more preferably from 20,000-180,000 pcg/mL; a concentration of TNF-α that
ranges from 200-20,000 pcg/ml, more preferably, from 1,000-4,000 pcg/mL. Recombinant,
natural or pegylated cytokines can be used or IRX-2 can include a mixture of recombinant,
natural or pegylated cytokines. IRX-2 can further include other recombinant, natural
or pegylated cytokines such as IL-12, GM-CSF (at a concentration that ranges from
100-10,000 pcg/mL, more preferably from 500-2,000 pcg/mL), and G-CSF.
[0022] For T-cells to become activated to kill neoplastic cells (e.g., head and neck cancer
cells), a number of steps must occur. First, a cellular antigen recognizable to a
T-cell must be presented to the T-cell. The lymph node contains antigen presenting
cells (APCs) that perform this function. APCs are also identified as dendritic cells
and are present in the stroma of the lymph node. Thus, the first step is antigen presentation
by dendritic or APC cells. Second, TH1 cells must be developed that are specific to
the antigen in question. Third, cytotoxic T-cells (CTL's) are "helped" to recognize
and then attack the foreign cellular material bearing the antigen following mobilization
from the lymph node to the site of invasion. Those TH cells that secrete cytokines
interleukin 2 (IL-2) and interferon gamma (IFN-γ) are called TH1 cells and are associated
with specifically stimulating CTL cytotoxic activity and cell-mediated immunity. Another
class of T cells designated TH2 secrete primarily interleukins 4, (IL-4), 5 (IL-5),
and 10 (IL-10) and promote the production of antibodies. The predominant "class" of
cytokines (e.g., TH1 or TH2) produced at the outset of an immune response acts to
"steer" the development of continued immune responses in part by inhibiting the production
of the opposite type of cytokines. Thus, the immune response becomes "pointed" in
either the TH1 (cell-mediated) or the TH2 (humoral) direction by the cytokine(s) present
early on. For the initiation of a robust anti-tumor immune response, it is therefore
crucial to have TH1-biased cytokines (e.g., IL-2, IFN-γ) present during the initial
phase of the immune response. The goal in cancer immunotherapy has been to stimulate
production of a sufficient number of tumor-specific cytotoxic T-cells to destroy the
tumor.
[0023] IRX-2 is a cytokine product produced under pharmaceutical standards from phytohaemagglutinin
and ciprofloxacin stimulated mononuclear cells obtained from normal, healthy blood
donors. This product is intended to be injected locally subcutaneously to feed into
the lymph nodes draining head and neck cancers for treatment of head and neck cancers.
This product can also be used for any other type of cancer or infectious disease.
[0024] In the commercial IRX-2 process, the PHA, ciprofloxacin and cellular elements are
removed through centrifugation and washing. The cell-free supernatant is further processed
to clear adventitious agents (DNA, viruses) and then formulated, filter sterilized
and vialed. Interleukin 2 (IL-2) is a major active cytokine component in IRX-2, along
with gamma interferon (IFN-γ), interleukin 1 beta (IL-1β) and tumor necrosis factor
alpha (TNF-α). These cytokines enhance cell-mediated immunity primarily as stimulators
of the TH1 pathway. Analysis of IRX-2 also reveals the presence of other cytokine
constituents at low levels, but these cytokines are considered to be not critical
in the potency of the product.
[0025] These components act to enhance cell-mediated immunity by a variety of activities:
recruitment of lymphocytes (primarily by IL-1β), up-regulation of lymphocyte growth
receptors such as IL-2 receptor (IL-2R) (primarily by IL-1β, IL-2, IFN-γ), enhancing
T cell proliferation (primarily by IL-1β, IL-2), maintaining a TH1 functional bias
(primarily by IFN-γ), and enhancing the processing and presentation of (tumor) antigens
by antigen presenting cells such as macrophages and dendritic cells (primarily by
IFN-γ) which are important for full activation of T cells leading to tumor destruction.
IRX-2 promotes the differentiation and maturation of dendritic cells. Mature dendritic
cells are required to effectively present antigen to T cells. IRX-2 also induces the
production of naïve T cells, which are capable of becoming specific upon presentation
by a mature dendritic cell having antigen exposed thereon. TNF-α is not considered
to be a primary active component clinically, but levels in IRX-2 are close to those
of the foregoing; because of the high lability of TNF-α, its content is monitored
as an indicator of product stability. Table 1 below provides a listing of concentrations
for these cytokines in cGMP lots used in Phase I and Phase II Clinical trials.
Table 1. Primary Cytokine Components of IRX-2
| Description |
IL-2 |
Cytokines ELISA (pg/mL) |
| |
Bioassay (IU/mL) |
IL-1β |
IL-2 |
IFN-γ |
TNF-α |
| Manual |
76 |
418 |
5263 |
2028 |
1356 |
| Manual |
145 |
615 |
5797 |
1502 |
1815 |
[0026] Additional cytokines and chemokines in IRX-2 have been identified by ELISA. These
include IL-6, IL-10, IL-12, IL-8, granulocyte colony stimulating factor (G-CSF) and
granulocyte-macrophage colony stimulating factor (GM-CSF). The levels of these proteins
are much lower than the concentrations of the primary active components except for
IL-6 and IL-8. They are typically associated with the inflammatory response, and they
are pleiotropic (i.e., have multiple mechanisms depending on the surrounding cells
and cytokine milieu). Table 2 presents a listing of these cytokines and their levels
in IRX-2.
Table 2. Primary Cytokine Components of IRX-2
| Description |
Cytokines ELISA (pg/mL) |
| IL-6 |
IL-8 |
IL-10 |
IL-12 |
G-CSF |
GM-CSF |
| Manual |
1487 |
20,689 |
109 |
15 |
152 |
579 |
| Manual |
4127 |
49,180 |
123 |
4 |
214 |
578 |
[0027] In addition to ELISA, RAYBIO Human Cytokine Array (Ray Biotech, Inc.) of the 42-most
common cytokines provides a cytokine profile or "footprint" of the IRX-2 product.
Figure 1 shows the cytokine profile of the IRX-2 that was used in Phase II clinical
trials.
[0028] The IRX-2 cytokine product contrasts with prior cytokine therapy in the following
ways: (1) physiological rather than pharmacological doses are used; (2) the product
is administered perilymphatically rather than intratumorally or intravenously; and,
(3) production is from activated leukocytes rather than based upon recombinant technology
in order to simulate endogenous cytokine levels from native activated cells.
[0029] The mode of delivery takes advantage of the normal afferent and efferent pathways
of lymph node activation. Normally, lymphatics drain from an area of interest, such
as a tumor bed, and antigens and other factors associated with disease migrate in
the lymphatics to the regional nodes. At the regional nodes, antigen-presenting cells
(APC or dendritic cells) are responsible for securing and processing these disease-related
antigens and presenting them to T-cells, with resultant proliferation of activated,
antigen-specific T-cells. By presenting the natural primary cell derived biologic
at this location, rather than systemically, there is an opportunity to facilitate
or mobilize dendritic cell function as well as directly activate T-cells to proliferate
and become CTL cells. Additionally, by more direct application, lower drug exposures
are permitted and less active cytokine drug substance is lost in systemic circulation.
[0030] Individual cytokine doses have been evaluated for toxicity in clinical trials and
found to have typical dose-toxicity profiles. In contrast, cytokine dose-response
curves are typically bell-shaped. Many cytokines are approved for human therapeutic
use or have been evaluated in Phase I or Phase II clinical studies. When tested, the
dose-toxicity profile of investigated cytokines has not been affected by concomitant
administration of other cytokines. Based on the history of past use, a comparison
chart of recommended or evaluated doses at the threshold of toxicity for various cytokines
and the amount that cytokine present in a complete course of IRX-2 is shown in Table
3 along with the likely margin of safety in orders of magnitude as follows.
Table 3. Comparison of maximum IRX-2 cytokine doses vs. therapeutic doses
| Cytokine |
Upper Limit New Specs. |
Cumulative IRX-2 Dose with new upper limit specification |
Therapeutic Dose (Systemic Administration) |
Safety Margin Log scale) |
| IL-2 |
8000 pg/mL |
3 3360 IU |
>1,000,000,000 IU |
>6 |
| γ-IFN |
3800 pg/mL |
4 0.076 pg |
450 µg |
>3.5 |
| IL-1β |
1400 pg/mL |
4 0.028 µg |
10 µg |
>2.5 |
| TNF-α |
4300 pg/mL |
4 0.086 pg |
200 µg |
>3 |
| IL-2 Bioactivity |
310 IU/mL |
4 6200 IU |
>1,000,000,000 IU |
>6 |
3Calculation : 8000 pg IL-2/mL x 0.021 IU/pg x 20 mL = 3360 IU
4 New Specifications x (10 x 2) mL = cumulative IRX-2 maximum dose |
[0031] Given these safety margins, it is unlikely that significant toxicological impact
would result from the doses of individual cytokines contained within IRX-2.
[0032] As used herein, "mononuclear cells" (MNCs) are cells of the hematopoietic system
which do not contain granules. MNCs include lymphocytes, plasma cells, monocytes and
macrophages, and mast cells.
[0033] As used herein, "adventitious agents" are viruses and toxins, and often infectious
agents, which can accidentally contaminate a cell line. Adventitious agents in the
present invention are desired to be removed from primary cell derived biologic before
administration to a patient to reduce or eliminate chances of infection of unwanted
diseases.
[0034] The process of the present invention is detailed in the right column of FIGURE 2.
Each of the steps in the process is amenable to scale-up for production of large quantities
of the primary cell derived biologic.
[0035] In the first step of the process, the MNCs are purified to remove any cells that
could be contaminating to the production of the primary cell derived biologic through
the use of a cell processor, which is a programmable centrifugal device. This device
is further described in the Examples below. The MNCs are enriched to be composed of
lymphocytes and monocytes by loading the MNCs on Lymphocyte Separation Medium (LSM)
and then centrifuging the MNCs. Preferably, 300 mL of LSM is used. The MNCs from donors
are purified simultaneously, which means that multiple donors can be purified at once.
Preferably, MNCs from 12 donors are simultaneously purified. The purification of cells
by centrifuging of the MNCs is preferably at 1500 to 3000 rpm to optimize removal
of granulocytes and red blood cells.
[0036] In general, the first step is an automated method of purifying cells by loading cells
into an automated cell processor, washing and centrifuging the cells automatically,
and obtaining purified cells. In other words, the automated method can be used for
any cells for which purification is desired, and it is not limited to MNCs. Importantly,
the use of the automated cell processor allows for scale-up or scale-down of the cells
purified through adjusting specifications of the cell processor.
[0037] Such a purification process has previously been used to simply purify cells for subsequent
use of the cells. It has not been used to produce cytokines and has not been used
to produce natural cytokines.
[0038] The MNCs are then stored overnight in a closed sterile bag system. Preferably the
bag is a fluorinated ethylene propylene (FEP) bag. The use of the bags in the present
invention optimizes cytokine production above normal production levels. This is due
to the rich O
2 environment in the bags which is optimal for cytokine production.
[0039] The next day, an induction mixture of the MNCs is stimulated with PHA for 2 hrs and
ciprofloxacin for 2 hours at 37 C in 5% CO
2. Preferably, 80 µg/mL of ciprofloxacin are used. The induction occurs in a scalable
cell culture device, which allows for greater quantities of mixtures to be induced
than have previously been induced. Induction with the scalable cell culture device
allows for the production of cytokines in greater quantities than have previously
been induced in the manual method. Thus, in general, the present invention provides
for a method of inducing cells by inducing cells in a scalable cell culture system.
Cells can be induced to make any cellular product, such as the cytokines induced in
the present invention. The process is not limited to induction of cytokines, and any
desired product can be induced.
[0040] PHA is then removed from the induction mixture through filtering. More specifically,
the induction mixture is washed with sterile saline, the MNCs are recovered, and then
resuspended in culture medium with 80 µg/mL ciprofloxacin. Preferably, the level of
PHA is reduced to less than <150 ng/mL. Preferably, the filter is the Spectrum® CellFlow
Plus® Hollow Fiber filter, and operates in tangential flow mode. The incubation mixture
is then incubated, preferably for 24 hours. Normally, cell washing processes are used
to obtain cells to be used. The present invention uses washing to remove PHA but the
cells are returned to the culture in order to produce further cytokines. The filters
in this step and in each step of the process are scalable and any appropriate filter
can be used. After 24 hours the primary cell derived biologic is produced comprised
of type I (TH1) cytokines. The induction mixture is then clarified, i.e. harvested,
to obtain the primary cell derived biologic supernatant from the MNCs. The cells are
filtered with a fluorodyne membrane with a 0.45 µm filter. Preferably, the filter
is a FLUORODYNE II TM (Pall) filter is used and further described in the Examples.
This automatic step provides advantages over the previous manual centrifugation of
the primary cell derived biologic.
[0041] The last step in the method of production is clearing the primary cell derived biologic
supernatant from DNA and adventitious agents by applying anion exchange chromatography
and 15 nanometer virus filtration. Additional viral inactivation can be achieved by
applying UVC. Various adventitious agents can be cleared, as described above, such
as viruses and DNA. Viruses cleared include, but are not limited to, human immunodeficiency
virus (HIV), hepatitis C (HCV), hepatitis B (HBV), human T-lymphotropic virus (HTLV),
simian virus 40 (SV40), porcine parvovirus (PPV), pseudorabies virus (PRV), hepatitis
A (HAV), bovine viral diarrhea virus (BVDV), Sindbis, Reo and Adeno viruses. Preferably,
the anion exchange and 15 nanometer virus filtration steps clear over 4 log
10 viruses.
[0042] When UVC is applied, it is uniformly delivered to the primary cell derived biologic
by spirally flowing the primary cell derived biologic supernatant along an UVC irradiation
source. Preferably, the UVC is delivered at a wavelength of 254 nm of the primary
cell derived biologic, and at a dose of up to 150 J/m
2.
[0043] Preferably, the unique primary cell derived biologic produced is IRX-2 (formerly
known as NCM). The cytokines produced in IRX-2 include IL-1β, IL-2, and IFN-γ. Preferably,
IL-2 and IL-1β are produced in a 10:1 ratio. Preferably, greater than 4 L of IRX-2
is produced total in a batch. Preferably, the primary cell derived biologic supernatant
can be concentrated and formulated to 300-1800 pg/mL IL-1β, 4000-8000 pg/mL IL-2,
1000-3800 pg/mL IFN-γ, and 1000-4300 pg/mL TNF-α are produced. The induction mixture
can be optionally actively gassed.
[0044] The data herein show that the IRX-2 process is significantly improved by the following
process improvements: (1) MNC purification using the automated cell processor, (2)
storage of MNCs in VUELIFE® (American Fluoroseal Corporation) FEP bags, (3) induction
in a scalable cell culture device (4) cell washing using Hollow Fiber (HF) filter
system and (5) culture supernatant clarification via filtration using a 0.45 µm filter,
(6) DNA removal using anion exchange chromatography filtration, (7) virus removal
using dual 15 nanometer filters in series, and (8) additional viral inactivation can
be achieved by applying UVC. An assessment of each unit operation and its changes
shows that the critical parameters are maintained within an acceptable working range
and that the process is able to provide product meeting its specifications.
[0045] The commercial process was further evaluated by performing several batches with all
of the process modifications which produced all of the IRX-2 cytokines in typical
ratios as previously seen with the manual process. Comparability of the primary cell
derived biologic components and biological equivalence were confirmed by the RAYBIO
Human Cytokine Antibody Array (RayBiotech, Inc.) and the peptide conjugate vaccine
model. Based on these data, the commercial process is comparable to the manual IRX-2
process and producing a consistent and reproducible product.
[0046] As shown in FIGURE 2, developments/changes from the previous IRX-2 process were made
in each of the following steps of manufacturing. First, in the purification step,
there was a change from manual centrifugation to an automated cell processor. The
overnight storage of the MNCs was changed from overnight storage of MNC in polypropylene
tubes to storage of MNCs in VUELIFE® FEP bags. Cell washing was improved by changing
from manual centrifugation to a Hollow Fiber (HF) filter system. Induction was improved
and scalability of the process was achieved by using a disposable cell culture device
(Cell Factory). Also, harvesting/clarification of the culture supernatant was improved
by changing from manual centrifugation to single pass filtration using a 0.45µm filter
DNA removal was improved by filtration with anion exchange chromatography filters.
Virus removal was improved by filtration with dual 15 nanometer filters in series.
Further virus inactivation can be improved by applying UVC.
[0047] Due to these changes, the IRX-2 commercial manufacturing process has been improved
over the previous manual process. Overall, a reduction of production time and effort
by use of the automated cell processor removes much of the error and variation produced
between batches of IRX-2 in the previous process. For example, operator error is reduced
due to automation. Volume scale up is achieved due to the system design and automation.
Furthermore, contamination is avoided because a closed bag system is used, affording
aseptic processing, which is an immense advantage over the previous process. The advantages
of the viral clearance are discussed below.
[0048] The commercial method of IRX-2 manufacture includes viral clearance by nanofiltration
15N filters in series as a dedicated virus removal step and also includes DNA removal
by the disposable anion exchange chromatography unit. 15N filters have been shown
to be highly effective in removal of human immunodeficiency virus type 1 (HIV-1),
pseudorabies virus (PRV), hepatitis A virus (HAV), bovine viral diarrhea virus (BVDV)
and porcine parvovirus (PPV) in studies performed by the manufacturer and end users.
In contrast, anion exchange has been shown to be effective against select target viruses.
It is strongly advised to have two orthogonal methods that are capable of removing
or inactivating a variety of model viruses in order to best assure patient safety
(FDA Points To Consider, 1993).
[0049] In order to add an additional viral clearance method to the IRX-2 process, UVC inactivation
is added as an inactivation step in the present invention. As further discussed in
the Examples below, studies were conducted over a wide range of UV doses from 20-150
J/m
2 and showed no significant change in cytokine content using cytokine ELISA, western
blot, cytokine arrays or CTLL-2 bioassay. In addition a new bioassay for TNF-α was
developed which measures bioactivity of this labile cytokine. Although some decrease
in TNF-α bioactivity was detected, this loss was comparable to the loss typically
seen in other processing steps. At these same UVC doses (100 J/m
2) greater than 4 log
10 of viral inactivation was achieved for the model viruses, PPV and BVDV, and for the
blood borne virus, HAV. HIV was minimally inactivated with < 2 log
10 of viral inactivation. Utilizing this UVC technology, multiple laboratory batches
of IRX-2 were successfully produced at the current scale and passed bulk release specifications
confirming the robustness of the UVC process. The improved process provides better
protection of patients by including an inactivation step which is robust and can inactivate
a wide range of viral contaminants including non-enveloped viruses such as hepatitis
A and parvovirus B19 and enveloped viruses (hepatitis C virus).
[0050] The data in the Examples summarizes the development of a new viral inactivation technology,
UVC irradiation, capable of complementing the viral clearance methods without significantly
reducing IRX-2 cytokine yields. Based on these requirements and the source material,
human leukocytes, inactivation of 4 log
10 of the test viruses is the desired target for this additional procedure to be useful.
UVC inactivation when combined with the two existing methods of viral clearance in
the IRX-2 process, anion exchange and 15N filtration, could potentially increase the
overall viral inactivation/removal to 12 or more log
10 of non-enveloped viruses.
[0051] Development/changes in the IRX-2 process were made in the following steps of manufacturing:
Cobe 2991 automated cell processing centrifugation, use of sterile bags for lymphocyte
storage, induction in a disposable cell culture device, cell washing with hollow fiber
filtration, DNA removal with anion exchange chromatography, viral removal with dual
15 nanometer filtration in series and additional viral inactivation by UVC. Figure
2 illustrates the IRX-2 process with the addition of UVC viral inactivation.
[0052] The invention is further described in detail by reference to the following experimental
examples. These examples are provided for the purpose of illustration only, and are
not intended to be limiting unless otherwise specified. Thus, the present invention
should in no way be construed as being limited to the following examples, but rather,
be construed to encompass any and all variations which become evident as a result
of the teaching provided herein.
EXAMPLE 1
Purification of MNCs using Cell processor/ FEP bag storage
LSM Fraction Studies
[0053] The purpose of the LSM purification step in the IRX-2 process is to remove contaminating
cells (granulocytes, red blood cells and platelets) yielding an enriched preparation
of mononuclear cells (MNCs) composed of lymphocytes and monocytes.
[0054] Granulocytes can cause poor cytokine yield by interfering with accurate cell counting
of MNC as well as interfering with PHA induction (i.e. by binding PHA). The actual
process limit of granulocytes has not yet been determined. Early in the process development
of IRX-2, granulocyte removal was monitored on the Coulter Ac•T diff 2 hemocytology
analyzer and the process limit was set at NMT 5% (limit of detection of the Ac•T diff
2).
[0055] In the previous process, MNCs are purified manually using centrifugation over Lymphocyte
Separation Medium density gradients (LSM, equivalent to FICOLL-HYPAQUE 1077 (Sigma)).
Each donation is purified separately and up to 24 donations are pooled just prior
to cytokine induction. This results in high purity, but is not suited to scale up
due to the limitation of manual processing which requires two operators a full 8-10
hr shift to process 24 donors (12 donors per operator).
[0056] In the modified process of the present invention, LSM purification is performed using
a closed sterile bag system and a programmable centrifugal device, a cell processor.
The commercial process allows the leukocytes to be processed in donor pools of 12.
This allows one operator to process up to 36 donors per shift.
[0057] In the commercial process bags are aseptically filled and leukocytes are pooled.
The leukocyte bags are aseptically attached to a harness. Leukocytes are pooled into
a single bag and the bag is heat sealed. The bag is installed in the Cell Processor
and valves and color-coded tubing is aligned. The leukocytes are loaded and centrifuged.
A buffy coat is prepared, concentrated, and collected. A second bag is installed in
the Cell Processor. The buffy coat is layered onto LSM at 20 mL/minute, and centrifuged
for 20 minutes. The MNCs are separated out into a third bag. Cells are washed in the
programmed wash cycles with saline and resuspended in serum-free culture media.
[0059] To analyze the feasibility of using the cell processor for LSM purification of MNCs,
initial development of the procedure involved purifying MNCs via a cell processor
and aseptically collecting the expressed cells in fractions. These fractions were
analyzed via the Coulter Ac•T diff 2 analyzer and showed that the purified MNCs can
be collected essentially free of granulocytes.
Table 4. Coulter Ac•T diff 2 analysis of collected MNC Fractions
| Fraction |
Total Cells (108) |
Volume (mL) |
% Lymph |
% Mono |
% Grans |
| 1 |
0.075 |
25 |
---n.d. |
--- |
--- |
| 2 |
0.025 |
25 |
--- |
--- |
--- |
| 3* |
20 |
25 |
88 |
9 |
2.2 |
| 4* |
15 |
25 |
90 |
7.5 |
2.4 |
| 5* |
2.7 |
25 |
88 |
5.9 |
5.7 |
| 6* |
1.3 |
25 |
89 |
3.4 |
7.4 |
| 7 |
0.85 |
25 |
88 |
2.2 |
9.8 |
| 8 |
0.48 |
25 |
81 |
3.9 |
14.7 |
| 9 |
0.30 |
25 |
73 |
4.7 |
21.9 |
| 10 |
0.25 |
25 |
--- |
--- |
--- |
| pooled fractions; n.d. - none detected |
[0060] Figure 3 and Table 4 show the relative cell distribution of the fractions collected
from the cell processor This demonstrate the potential to collect up to 100 mL of
MNCs from the cell processor that meet the required purity (≤ 5% granulocytes), with
a total yield of cells as high as 4 x 10
9 cells. This equates to a 10 fold increase of cells that can purified by a single
operator. Fractions containing most of the MNC (Fractions 3-6) were aseptically collected,
pooled and washed by the standard wash method and stored overnight in FEP bags
[0061] The MNCs were used to produce an IRX-2 batch with the appropriate cytokine levels
of IL-1β, IL-2 & IFN-γ for IRX-2 production.
MNC Storage Studies
[0062] In the previous process, purified MNCs are stored overnight in polypropylene centrifuge
tubes. Due to the large volume of MNCs produced per run using the cell processor,
an alternative to storage of 40 mL of individual donor MNCs (approx 5 x 10
8) in 200 mL polypropylene tubes was implemented. To accommodate the high yields of
cells, (FEP) bags were used to store MNCs overnight (37°C, 5% CO
2). FEP bags storage bags have been utilized for expansion of dendritic cells, the
storage of human lymphocytes and production of LAK cells and are suitable for lymphocytes
storage due to the high gas permeability and low binding properties. To store the
cells, the concentration in the FEP bags was adjusted to be equivalent to the storage
concentration in polypropylene tubes. MNC viability and cell concentration were monitored
using the GUAVA VIACOUNT (Guava Technologies).
[0063] The MNCs are aseptically removed from their bag and aseptically transferred to the
FEP bag. The FEP bags are stored overnight.
[0065] The overnight storage procedure was evaluated by comparing the cell concentration
and viability for purified MNCs. Samples were evaluated by the Guava®Viacount® on
Day 1 (at time of dilution into FEP bags and Day 2 (prior to PHA induction). As can
be seen in Table 5, the MNCs showed no loss in cell concentration and retained high
viability (95%) during the overnight storage demonstrating the suitability of the
storage methods.
Table 5. Cell population analysis of cell processor purified MNCs via Viacount
| MNC Preparation |
Viacount Day 1 |
Viacount Day 2 |
| cells/mL* (x 107) |
% viability |
cells/mL+ (x107) |
% viability |
| N=20 |
1.9 ± 0.2 |
96 ± 2.1 |
1.9 ± 0.3 |
95 ± 3.5 |
Cell Type Characterization and Distribution Studies
[0066] To fully evaluate the MNCs produced on the cell processor, the various cell populations
in the purified MNCs were examined to determine comparability of the cells produced
by the new method versus the manual LSM purification. MNCs were analyzed using cell
differentiation (CD) marker via fluorescence activated cell sorting (FACS) to quantitate
the cell populations.
[0068] In Table 6, data on cell population distribution is presented both for MNCs prepared
by the manual LSM purification method, as well as by the automated cell processor
method.
[0069] For the original method, FACS analysis was performed on Day 2 pooled MNCs immediately
prior to PHA induction. For the commercial process, cell populations were sampled
and tested on both Day 1 (prior to overnight storage) and Day 2 (after overnight storage).
Table 6. Cell population analysis of cell processor purified MNCs via FACS
| Sample |
CD14+/ 45+ Monocytes |
CD14-/45+ lymphcytes |
CD15+ Granulo cytes |
CD3 + T cell |
CD19+ B Cells |
CD16/ 56+ NK Cells |
| Manual Process: Day 2 (n=13*) |
18 ±3 |
80 ±4 |
1 ± 0.4 |
55 ±4 |
7 ±2 |
8 ±2 |
| Commer cial Process Day 12 (n=25) |
18 ±3 |
69 ±6 |
2.2 ± 2.3 |
47 ±8 |
9 ±3 |
13 ±3 |
| Commer cial Process Day22 (n=25) |
12 ±4 |
75 ±5 |
1.7 ±1.6 |
54 ±5 |
8 ±2 |
12 ±4 |
| Data presented as percent total cells (mean ± s.d), B |
[0070] The data in Table 10 confirms the equivalence of the commercial process to the manual
method. The resulting MNC preparations were produced with granulocyte content below
the current specification of ≤ 5 % as predicted in the available literature (Brutel
de la Riviere et. al. 1977). This data indicates that the MNCs generated by the cell
processor are equivalent in cell distribution and purity to the standard method.
[0071] It was observed that the monocyte concentration (CD14
+/CD45
+) appears to be consistently lower in the commercial process after incubation (Day
2) compared to the previous manual process method. Examination of the freshly prepared
MNC (Day 1) revealed there was a slight drop in the monocyte marker (CD14+) population,
from 18% to 12%.
[0072] The slight difference in the cell population was investigated further by determining
the cell population of cell processor purified MNC immediately after processing and
prior to the overnight incubation.
[0073] Table 10 shows that the mononuclear cells sampled immediately from the cell processor
look comparable to that seen for the previous process. It is evident from these data
that the time when the cells are sampled and analyzed has a large effect on the population
profile. In the new process, cells sampled after the overnight storage have a slightly
lower shift in the CD14
+ CD45
+ marker for monocytes. This change in the CD14
+ CD45
+ population can be attributed to the activation of monocytes with heterologous donor
lymphocytes; this is termed a mixed lymphocyte reaction (MLR). According to the literature
(Jordan & Ritter 2002), this reaction can prime the T cells to produce TH 1 cytokines
(i.e. IL-1β, TNF-α, and IFN-γ), which are the primary products of the IRX-2 process.
Since these are desired in the product, holding the pool overnight shows no negative
impact on IRX-2 production.
2-3 L Batch Studies
[0074] The purpose of this study was to produce several 2-3 L IRX-2 development batches
utilizing cell processor purified MNCs. The purified MNCs cell preparations from several
runs, performed on the same day were pooled to produce sufficient cells to produce
a 10 stack cell culture device batch.
[0076] The equivalence of cytokine production from the commercial process was confirmed
via numerous ELISA assays and the CTLL-2 bioassay. The final product ranges for the
various cytokines were predicted by normalizing the cytokines to a target concentration
of 7000 pg/mL of IL-2. As can be seen in Table 7, the bulk product produced could
be formulated to pass all of the cytokine assays and are comparable to the Phase I
and II clinical product.
Table 7. Cytokine production of IRX-2 produced using a Cell Processor™ purified MNCs
| Description |
IL-2 Bioactivity (IU/mL) |
Cytokines ELlSA (pg/mL) |
| IL-1b |
IL-2 |
IFN-γ |
TNF-α |
| Bulk (n=5) |
560 ± 57 |
2,273 ± 402 |
21,428 ±1880 |
6820 ± 2064 |
10,279 ± 2299 |
| |
|
|
|
|
|
| Normalized (n=5) |
184 ± 26 |
741 ± 111 |
7000 |
2261 ± 773 |
3350 ± 620 |
| |
|
|
|
|
|
| QC Release Specification |
75-310 |
300-1400 |
4000-8000 |
1000-3800 |
1000-4300 |
| |
|
|
|
|
|
| Manual |
76 |
418 |
5263 |
2028 |
1356 |
| Manual |
145 |
615 |
5797 |
1502 |
1815 |
| Data presented as mean ± s.d |
[0077] The main difference in the modified process is the resulting purified MNCs from multiple
donors (monocytes, T cells, B cells and NK cells) are incubated together overnight
prior to mitogen induction. To confirm no new species of cytokines are produced from
this method, especially TH2 cytokines (i.e. IL-3, IL-4 & IL-5) and to prove the comparability
of cytokine production from the cell processor generated MNCs, the modified process
IRX-2 was analyzed via cytokine arrays (Array 3, RAYBIO Human Cytokine Antibody (RayBiotech,
Inc.)) which detects 42 human cytokines, chemokines and growth factors. Array analysis
of these most common cytokines (Huang et. al. 2001) on IRX-2 from cell processor generated
cells confirmed that the commercial IRX-2 product profile or "footprint" is comparable
in cytokine composition to the current product and no new cytokines are induced (i.e.
Type 2 cytokines) as shown in FIGURE 4.
EXAMPLE 2
Cell Washing using the Hollow filter system
[0078] An automated MNC wash method was developed, which effectively removes the process
chemical phytohemagglutinin (PHA), a mitogen, from induced MNCs to levels comparable
to washing by manual centrifugation while maintaining cell viability and the ability
to produce IRX-2 cytokines.
[0079] In the second step of the IRX-2 process, pooled MNCs are induced to produce biologically
active cytokines by the addition of a mitogen, phytohemagglutinin (PHA), and ciprofloxacin.
In conjunction with PHA, the ciprofloxacin stimulates the cells inducing transcription
of type I cytokines including IL-2 and IFN-γ. After induction, the induction mixture,
culture medium and cells, is aseptically harvested and the cells are recovered via
centrifugation. The cell culture device is washed with sterile saline three times
and approximately 20% of the cells are recovered from the combined the washes with
about 80% of the cells remaining attached to the CF surfaces. The recovered cells
are then resuspended in fresh X-Vivo 10 culture medium with 80 µg/mL ciprofloxacin
and returned to the cell culture device. Cytokine generation occurs over an additional
24 hr period producing the bulk IRX-2 free of mitogen.
[0080] To assess the efficiency of the wash process and assure minimal residual of the process
impurity, the final bulk product is tested for residual PHA via an ELISA. The final
product specification for residual PHA is < 150 ng/mL, the limit of detection of the
PHA ELISA assay.
[0081] In the improved method, cell washing and removal of PHA is accomplished using hollow
fiber filtration in tangential flow mode In addition to cytokine production, the critical
output parameters used to demonstrate equivalency are PHA removal and viable cell
recovery.
[0083] To more accurately determine these low residual levels of PHA a new more sensitive
PHA ELISA was developed and validated. Table 8 compares the PHA content of an IRX-2
Clinical lot processed using centrifugation (used in Phase II clinical production)
with that for six lots in which washing was performed by the hollow fiber filtration
method. With the new method, the mitogen has been removed to a level below the specification
limit for PHA.
Table 8. PHA content following removal by centrifugation or hollow fiber filtration
| Batch |
Batch Volume
(mL) |
Saline Wash volume |
Wash Method |
PHA concentration
(ng/mL)* |
| Specification limit |
N/A |
N/A |
N/A |
<150 |
| Phase II Manual Process |
2800 |
1.8 L |
Centrifugation |
104 |
| |
|
|
|
|
Hollow Fiber
N=6 |
2000-3500 |
2-3 L |
Hollowfiber filtration |
191
± 30 |
| 1Data presented as mean ± s.d assay date 11/06/06 Pre-MQ |
[0084] Table 9 presents the % cell recovery of the washed cells using the HF washing method
from two different batches. As can be seen below, the induction mixture recovered
from the cell factory after the two hours incubation (labeled "CF Contents") contains
a small fraction of the starting cells (12%) initially induced in the cell culture
device. These data confirm, after the hollow fiber wash process, the cells were recovered
with suitable viability and with minimal loss, well within assay variability, as determined
by Trypan blue dye exclusion.
Table 9. Trypan Blue dye exclusion of recovered MNC during hollow fiber wash
| Viable Cell Count |
| Sample Description |
Total cells |
% recovery |
| Total cell in reservoir Pre-PHA induction |
6.2 × 109 |
100 |
| |
|
|
| CF Contents |
6.9 × 108 |
12 |
| 1st wash |
4.5 × 108 |
7 |
| 2nd wash |
1.9 × 108 |
3 |
| 3rd wash |
2.8 × 107 |
1 |
| |
|
|
| Total cells from wash steps |
1.3 × 109 |
23 |
| |
|
|
| Recovered cell concentrate in XVG after wash and diafiltration |
1.5 × 109 |
24 |
[0085] Analysis of the cytokine produced by cells washed by the new method is presented
in Table 10 show the typical IRX-2 cytokines.
Table 10. Cytokine production of IRX-2 produced using hollow fiber filtration
| Description |
IL-2 Bioactivity IU/mL |
Cytokine ELISA (pg/mL) |
| IL-1b |
IL-2 |
IFN-γ |
TNF-α |
| Phase II Manual Process |
204 |
899 |
10,470 |
2576 |
2264 |
| |
|
|
|
|
|
| Hollow Fiber Mean ± s.d. N=2 |
194 ± 58 |
1035 ± 858 |
11,999 ± 3984 |
2423 ± 858 |
5956 ± 3230 |
| 1Data presented as mean ± s.d |
[0086] These preliminary data confirmed the Hollow Fiber (HF) filter system can be used
to wash cells, replacing the arduous and time consuming manual centrifugation with
adequate PHA removal, cell recovery and cytokine production in the production of IRX-2.
EXAMPLE 3
Harvest/clarification of IRX-2 culture supernatant
[0087] A supernatant clarification method was developed 0.45 micron filtration, which effectively
removes cells from culture supernatant and is comparable to manual centrifugation
without significantly reducing IRX-2 cytokine yields. There is shown to be little
to no removal of critical IRX-2 cytokines. Supernatant clarification is shown in FIGURE
12.
[0089] During the current IRX-2 process the culture supernatant containing the induced cytokines
was clarified (i.e. cell removal) utilizing centrifugation. In order to streamline
and scale-up the process we evaluated a 0.45 micronfilter membrane filter for cell
removal and supernatant clarification. The same PVDF membrane material is used in
other stages of the IRX-2 process (anion exchange pre-filter and final product sterilizing
grade filter) and was selected for minimal protein binding. Evaluation of the data
demonstrates minimal cytokine removal when the IRX-2 culture supernatant was filtered
through the fluorodyne membrane (Table 11). The filter will be scaled (using the batch
volume to filter area ratio and at constant delta P) according to the required IRX-2
batch size.
Table 11. Cytokine % Recovery using 0.45 micron PVDF filtration
| Sample |
(% Recovery) |
| IL-2 Bioactivity |
Cytokines ELISA |
| IL-1 β |
IL-2 |
IFN-γ |
TNF-α |
| 0.45 micron PVDF (n=3) |
101±16 |
94±8 |
96±7 |
103±13 |
92±12 |
EXAMPLE 4
Feasibility batches
[0090] The purpose of this study is to produce several batches at the current scale (2-3
L,) combining all of the new methods for IRX-2 production. This study will confirm
that these automated, "scalable" methods for producing IRX-2 are comparable to the
manual IRX-2 process.
[0092] Three feasibility batches were produced utilizing all of the process modification
outlined in this application. Cytokine analysis of the IRX-2 product utilizing the
entire modified process is presented in Table 12. These batches were normalized to
a target IL-2 concentration of 7000 pg/mL and compared to two clinical lots produced
by the manual process. Analysis of these batches showed the new process did produce
IRX-2 in the typical cytokine ranges.
Table 12. Cytokine Analysis of IRX-2 Produced by Commercial Process
| Description |
IL-2* Bioactivity
(IU/mL) |
Cytokines ELISA (pg/mL)* |
| IL-1b |
IL-2 |
IFN-γ |
TNF-α |
CommercialProcess
N=3 |
322
±120 |
1933
±559 |
15,416
±6973 |
3349
±1899 |
4856
±2117 |
| Commercial Normalized |
|
|
|
|
|
Commercial Process
N=3 |
152
±29 |
939
±203 |
7000 |
1504
±293 |
2216
±61 |
| Clinical |
|
|
|
|
|
| Manual Phase I |
76 |
418 |
5263 |
2028 |
1356 |
| Manual Phase II |
145 |
615 |
5797 |
1502 |
1815 |
[0093] PHA removal via the hollow fiber washing method was also confirmed to provide acceptable
product with PHA levels meeting the QC release specification of < 150 ng/mL (Table
13) and provides a typical dose of 50 ng/kg, well below the level of safe administration
(167 ng/kg) or toxicity level (833,000 ng/kg) by 4 orders of magnitude. This clearly
demonstrates the low levels of the residual process mitogen represent a safe product.
Table 13. PHA content following removal by centrifugation or hollow fiber
| Description |
Batch Volume
(mL) |
Saline Wash volume |
Wash Method |
PHA concentration (ng/mL)* |
| Specification limit |
N/A |
N/A |
N/A |
<150 |
| Phase II Manual Process |
1500 |
1.2 L |
Centrifugation |
63 |
| |
|
|
|
|
HF
N=3 |
2500-3500 mL |
4-5 L |
Hollow fiber filtration |
64±7 |
| *Prior to anion exchange chromatography and viral filtration |
[0094] In addition to analytical testing, IRX-2 produced by the modified process also showed
equivalence performance in an
in vivo model, the peptide conjugate vaccine model. IRX-2 has been shown to illicit a T-cell
response in mice as measured by the generation of cytotoxic T cells or delayed type
hypersensitivity, DTH (Naylor and Hadden 2003). Samples of both the manual process
and IRX-2 made by the commercial process both induced delayed type hypersensitivity
reaction (DTH) in mice using PSMA peptide - KLH conjugate as antigen (Table 14 and
FIGURE 5). This confirms equivalent biological performance in an
in vivo model and provides data supporting the comparability of the IRX-2 made by the modified
process.
Table 14: In Vivo Activity Studies Evaluating Manual Process IRX-2 vs Commercial Process
IRX-2
| IRX-2 Sample |
ELISA Cytokine (pg/mL) |
| IL-2 |
IL-1b |
IFN-g |
TNF-a |
IL-8 |
| Phase II Manual |
5797 |
516 |
1502 |
1815 |
49180 |
| Manual |
6870 |
403 |
1688 |
1798 |
34824 |
| Commercial) (Experiment 1) |
7000 |
667 |
2544 |
3917 |
46671 |
| Commercial (Experiment 2) |
7000 |
667 |
2544 |
3917 |
46671 |
[0095] Protocol: Mice were immunized with PSMA-KLH conjugate vaccine and IRX-2 prepared
either by the standard process or the modified process. Mice received 9 additional
injection of IRX-2 alone and were boosted on day 14 and 28. The DTH response to the
peptides was measured as increase in footpad swelling 9 days after the booster immunization.
Conclusion
[0096] The data herein show that the IRX-2 process is significantly improved by the proposed
process improvements: (1) MNC purification using the automated cell processor, (2)
storage of MNCs in FEP bags, (3) cell washing using Hollow Fiber (HF) filter system,
(4) cytokine induction and generation in a disposable cell culture device, and (5)
culture supernatant clarification via filtration using PVDF 0.45µm filter. An assessment
of each unit operation and its changes shows that the critical parameters are maintained
within an acceptable working range and that the process is able to provide product
meeting its specifications. The process was further evaluated by performing several
batches with all of the process modifications which produced all of the IRX-2 cytokines
in typical ratios as previously seen with the current process. Comparability of the
primary cell derived biologic components and biological equivalence were confirmed
by the RAYBIO Human Cytokine Antibody Array (RayBiotech, Inc.) and the peptide conjugate
vaccine model. Based on these data, the modified process is comparable to the current
IRX-2 process and producing a consistent and reproducible product. A summary of the
changes can be found in Table 21 further below.
EXAMPLE 5
Virus elimination
[0097] As stated above, the previous method of IRX-2 manufacture includes viral clearance
by nanofiltration using dual 15N filters in series as a dedicated virus removal step
and also includes DNA removal by the (MQ) disposable anion exchange chromatography
unit.
UVC Treatment
[0098] The UVC system, a reactor with a novel spiral flow hydraulic mixing was designed
to overcome these limitations and to target application for use in biotechnology products
(Schmidt et al. 2005; Schmidt and Kauling, 2007). Studies with the UVC demonstrated
the effectiveness of UVC treatment, in the novel reactor, to inactivate viruses without
causing significant protein damage (Wang et. al. 2004). Virus and mock spiked Alpha
1-proteinase inhibitor (Alpha
1 PI) solutions were tested with various doses of UVC. The virus samples were assayed
for residual infectivity and amplified by the polymerase chain reaction (PCR). The
mock spiked samples were also assayed for protein integrity. Alpha
1 Pl, a plasma protein was selected as the target protein due to the presence of UV-absorbing
amino acids by which UV induced damage could be easily detected by a decrease in biological
activity. A diverse panel of viruses including enveloped and non-enveloped viruses
with single-stranded or double stranded, long or short, RNA or DNA genomes was tested.
UVC treatment of Alpha
1-PI resulted in over 4 log
10 inactivation of SV40, PPV, HAV, Sindbis, Reo and Adeno viruses demonstrating all
test viruses were inactivated regardless of the type of nucleic acid or presence of
an envelope.
[0099] In this study, viruses with the smallest genomes were found to be those most sensitive
to UVC treatment and detection of PCR amplicons 2.0kb was correlated to viral infectivity.
Doses that achieved significant virus inactivation yielded recovery of >90% protein
activity even in the absence of quenchers. The kinetics of viral inactivation were
relatively linear and no small resistant fraction of virus persisted. In addition,
PPV was shown to be a suitable model for B19 in UV irradiation studies by both PCR
and infectivity assays. A summary of the process development for the UVC treatment
is listed in Table 22 further below.
UVivatec® UVC System.
[0100] In the UVC reactor, novel hydraulic spiral flow along an irradiation source inducing
highly efficient mixing in a fluid stream, so high doses of UVC irradiation can be
delivered evenly and uniformly throughout the solution thus the required residence
times in the irradiation chamber are extremely short and UVC treatment is controllable
(Wang et. al., 2004; Schmidt et al., 2005; Schmidt and Kauling, 2007). A tubular poly(tetrafluorethelene)
conduit that spirals around a quartz tube with a concentric UVC source (254 nm) forms
the irradiation chamber of the reactor As fluid streams move spirally along the lamp
secondary circulating flows (Dean vortices) are generated that provide highly efficient
mixing which optimize virus exposure to the UV light source and allow for uniform
and controllable irradiation of the entire volume.
[0101] To optimize the virucidal activity of the UVC and minimize protein damage the UVC
system utilizes UVC irradiation at a wavelength of 254 nm. This wavelength was selected
to specifically target the nucleic acid component of the virus. Figure 7 illustrates
how viruses are inactivated at this wavelength while proteins are relatively unaffected
(Schmidt et. al. 2007).
[0102] In addition, doses required to inactivate viruses is 10 times lower than previous
described for UV irradiation used for plasma product, 1000-2000 J/m
2 (Chin et. al. 1995, Chin et. al. 1997, Caillet-Fauquet et. al. 2004, Sugawara et.
al. 2001).
[0103] UVC dosage is typically described in units of UV fluency and is dependent on (1)
average irradiance emitted by the lamp (2) residence time in the irradiation chamber
and (3) the optical density of the test solution, (W s/cm2 = J/cm2) (Wang et. al.,
2004; Li et. al. 2005). Prior to UVC treatment, the solution's A
254 is measured to determine the interference generated by the protein solution and based
on the A
254 the required flow rate to achieve the required dose is calculated.
Viral Clearance Studies
[0104] The IRX-2 commercial process includes two validated viral clearance methods shown
to remove or inactivate up to 11 log
10 of adventitious viral contamination (i.e. anion exchange chromatography and 15 nm
filtration). A third method, UV virus inactivation (UVC), was evaluated for use in
the IRX-2 process. Consistent with previously published data with the UVC technology
(Wang et. al., 2004; Schmidt et al., 2005; Schmidt and Kauling, 2007), doses known
to kill adventitious non-enveloped viruses, up to 150 J/m
2, show minimal inactivation of the IRX-2 cytokines.
[0105] The dose of 100 J/m
2 was shown to inactivate 4 logs of several target viruses including PPV, and HAV (Wang
et. al., 2004; Schmidt et al., 2005; Schmidt and Kauling, 2007) and was shown to have
minimal effect on IRX-2 cytokines. It was therefore selected as the target dose for
IRX-2.
[0106] The choice of viruses used for this study was based on the nature and origin of the
starting material and raw materials used in production (i.e., biotech product derived
from human leukocytes). Each virus used is a relevant virus that may contaminate the
source material (in this case human blood) or a recognized model for the expected
contaminating species. In addition, the model viruses were selected for their ability
to grow and create a high titer stock (in serum-free or low protein medium) and their
ease of detection in a sensitive and reliable assay. The viruses used for this study
were: HIV-1, BVDV, HAV, and PPV. The viruses used represent a wide range of physico-chemical
properties in order to thoroughly test the ability of the UVC systems to eliminate
viruses. It was not expected that UVC in these low dose ranges <100 J/m
2 would be effective against larger enveloped viruses. Therefore, pseudorabies virus
(PRV), typical surrogate for large, enveloped DNA viruses was not tested in this preliminary
study.
[0107] The viral clearance capability of UVC in IRX-2 was confirmed in two viral clearance
studies. Sample of IRX-2 (approximately 50ml) was spiked with model and blood borne
viruses and exposed to UVC doses ranging from 40-150 J/m
2. Table 15 shows the results at 100 J/m
2 and demonstrated UVC technology can provide 4 log
10 of inactivation of viruses.
Table 15.Viral Clearance Summary
| Virus Type |
Log10 Viral Clearance |
| Mustang -Q |
Dual 15 N |
UVC* |
Total |
| PPV |
4.30 |
≥7.24 |
7.37 |
≥18.9 |
| HIV-1 |
≥4.39 |
≥4.18 |
1.93 |
≥10.5 |
| HAV |
ND+ |
≥5.28 |
5.90 |
≥11.2 |
| BVDV |
ND+ |
≥6.01** |
5.31 |
≥11.3** |
| PRV |
≥4.5 |
≥6.45 |
nd+ |
≥ 10.9 |
| 100 J/M2; ** Calculated from a single 15N filter; + Not determined ≥ |
[0108] Under scaled down process conditions, UVC demonstrated over 4 logs
10 viral clearance for three of the viruses tested, PPV, HAV & BVDV. Over 7 logs of
PPV were inactivated with UVC. PPV, a model for B-19, is one of the smallest and most
difficult viruses to inactivate by other methods, solvent/detergent, pH or heat (Chin
et. al., 1995). Recent studies have confirmed the suitability of PPV to be a suitable
model for B-19 in parallel comparison during UVC inactivation (Wang et. al., 2004).
Human parvovirus, B-19, can reach >10
12 IU/mL in human plasma and is a potential hazard for blood derived products (Doley
and Corcoran 2006). HIV-1 was less efficiently inactivated by UVC, 1.9 logs, possibility
due to its larger genome size (80-110 nm), which potentially makes it more difficult
to inactivate with UVC (Wang et. al., 2004) but when added to the IRX-2 process increases
the viral clearance to over 10 logs
10.
[0109] This study validates the effectiveness of the UVC step for the IRX-2 process. In
addition, the UVC demonstrated over 4 logs removal of PPV, HAV and BVDV, thus providing
an additional viral clearance step in the IRX-2 process. With the addition of UVC,
the data indicates the total clearance through the cumulative validated process steps
was shown to be ≥ 10.5 logs for HIV-1, ≥11.2 for HAV, ≥11.3 for BVDV and ≥ 18.9 logs
for PPV.
2-3 L Batch UVC
[0110] To fully evaluate the UVC system, four batches were prepared using the new process
including all the combined process changes including processing with UVC (Table 16).
Table 16. Percent recovery of IRX-2 during UVC at the Commercial Scale
| % Recovery @100 J/m2 |
TNF-αIU/mL |
IL-2 IU/mL |
Cytokines (pg/mL) |
| IL-1β |
II-2 |
IFN -γ |
TNF-α |
IL- 8 |
IL-6 |
II10 |
G -CSF |
GM -C SF |
| |
|
|
|
|
|
|
|
|
|
|
|
| mean |
93 ± 19 |
88 ± 6 |
96 ± 7 |
90 ± 5 |
107 ± 10 |
92 ± 21 |
95 ± 3 |
66 ± 21 |
95 ± 32 |
96 ± 32 |
89 ± 7 |
[0112] UVC treatment of lab scale batches produced at the current scale, 2-3.5 L showed
less detectable loss of TNF-α bioactivity with a mean percent recovery of TNF-α bioactivity
of 93% and 92 % by ELISA, thus confirming the original findings in the small scale
studies, namely that IRX-2 is not affected by UVC irradiation under these conditions.
All other cytokines by ELISA or bioassay (CTLL-2) showed very good recovery of IRX-2
cytokines at a dose of 100J/m
2 which effectively inactivated non-enveloped viruses, HAV and PPV.
[0113] Array analysis, Ray Biotech, of the most common cytokines (Huang et. al. 2001) on
IRX-2 from UVC processed IRX-2 revealed IRX-2 product looks comparable in cytokine
composition before and after UVC treatment.
Conclusion
[0114] The data herein show that the IRX-2 process is significantly improved by the proposed
process addition of UVC inactivation and can be validated as a viral inactivation
method. The addition of an inactivation step meets the regulatory requirements and
adds to the robust viral inactivation/removal methods currently in the IRX-2 process.
Assessment of this unit operation and its changes shows that the critical parameters
are maintained within an acceptable working range and that the process is able to
provide product meeting its specifications. After UVC inactivation, the IRX-2 bulk
product can be frozen and prepared for distribution to patients.