FIELD OF THE INVENTION
[0001] The present invention relates to a highly sensitive immunoassay with large particle
labels
BACKGROUND OF THE INVENTION
[0002] Immunoassays are widely used in health care and other fields to determine the presence
or absence of specific molecules, such as proteins, hormones, DNA, RNA or enzymes.
[0003] A well-known immunoassay method used to determine the concentration of a specific
target (the antigen) in a body fluid is the so-called "Enzyme linked immunoassay"
(ELISA). Therein, analytes from a sample are immobilized on a solid support, and then
an antibody specific to said analyte is added to the solid support, so that it can
bind to the latter. The said antibody is linked to an enzyme. A substrate which can
be converted by the enzyme in such way that a detectable moiety is produced, e.g.
a fluorophore, is then added to the solid support. After a washing step, the solid
substrate undergoes a treatment which allows detection of the detectable moiety, e.g.
on a fluorescence reader. Thus, it can be determined whether or not the analyte was
present in the sample.
[0004] A sandwich immunoassay comprises two antibodies that bind to different, non overlapping
epitopes on the antigen. A first antibody (the capture antibody) is bound to a solid
support and then the sample containing the antigen is added to allow complex formation
between antigen and capture antibody. Unbound molecules are removed in a washing step,
and then the labeled second antibody (detection antibody) is added and allowed to
bind to the complex of capture antibody and antigen, thus forming the "sandwich".
After a washing step to remove unbound detection antibodies the quantity of the target
molecule is determined by measuring the amount of labeled detection antibody. A number
of labeling techniques are used including fluorescence, chemiluminescence, radioactive
or magnetic labels.
[0005] In most cases, two monoclonal antibodies are used that recognize different sites
of the target. In another variant, a combination of a monoclonal capture antibody
and an affinity-purified polyclonal detection antibody that has been raised against
a different epitope on the antigen is used.
[0006] In health care many different molecules are measured to diagnose or monitor a disease.
For example the Glucose content in the blood is measured to monitor diabetes. Glucose
is a molecule that is present in the blood at relatively high concentration of about
of several hundred µg to about 1 mg per mL, corresponding to concentrations lying
in the range of about 3 to 6 millimol per mL. The measuring device is provided in
form of a handheld device comprising a test strip.
[0007] In contrast thereto, other molecules, like the biomarker NT-proBNP, which is used
to monitor heart failure, are present in the blood at significantly lower concentrations.
In healthy patients, NT-proBNP is present in the blood at concentrations of about
20 pg - 150 pg/mL, corresponding to about 24-176 picomol/mL. Values above 500 pg/mL
are generally considered to be indicative for acute congestive heart failure (CHF).
[0008] Currently, measuring very low concentrations of biomarkers for the diagnosis of disease
(for example, cardiovascular disease) requires laboratory analysis, large sample volumes
and a time-to-result delay of between 15 minutes and several hours. Although these
tests are compact benchtop tests, the relatively long turn around time and large sample
volume makes them unsuitable for more demanding environments such as hospital emergency
departments, physician's offices and ambulances, where small sample volumes, ease
of use, speed and high sensitivity are required.
[0009] Dittmer W. U. et al., Sensitive and rapid immunoassay for parathyroid hormone using
magnetic particle labels and magnetic actuation, Journal of immunological methods,
Elsevier Science publishers B.V., Amsterdam, NL, vol. 338, no 1- 2, 30 September 2008
(2008-09-30, pages 40- 46, XP025400186, ISSN: 0022-1759, DOI: 10.1016/J.JIM.2008.07.001, describes a rapid method for the sensitive detection of proteins using actuated
magnetic particle labels, which are measured with a giant magneto-resistive (GMR)
biosensor. The technique involves a 1 step sandwich immunoassay with no fluid replacement
steps. The various assay binding reactions as well as the bound/ free separation are
entirely controlled by magnetic forces induced by electromagnets above and below the
sensor chip. During the assay, particles conjugated with tracer antibodies are actuated
through the sample for target capture, and rapidly brought to the sensor surface where
they bind to immobilized capture antibodies. Weakly or unbound labels are removed
with a magnetic force orientated away from the GMR sensor surface. For the measurement
of parathyroid hormone (PTH) a detection limit in the 10pm range is obtained with
a total assay time of 15min when 300nm, particles are used. The same sensitivity can
be achieved in 5min when 500nm particles are used.
[0010] EP 1473567 A1 discloses an immunoassay for detection and/ or quantification of cardiac troponin
I (cTnI) in a sample derived from an individuals blood, said method being based on
a sandwich immunoassay employing at least two capture antibodies and at least one
tracer antibody.
[0011] WO 2004/046727 A1 describes an in-vitro ELISA assay and diagnostic test kit for determining levels
of NT-proBNP protein in a variety of bodily fluids, e.g. blood.
DEFINITIONS
[0012] The term "antibody", as used herein, shall refer to polyclonal and/or monoclonal
antibodies of any isotype (IgA, IgD, IgE, IgG, IgM), or an antigen-binding portion
thereof, including, but not limited to F(ab) and Fv fragments, single chain antibodies,
chimeric antibodies and humanized antibodies.
[0013] The term "analyte", as used herein, shall refer to a peptide or protein with a) ≥
20 and ≤ 180 amino acid residues, and/or b). a molecular weight of ≥ 2 and ≤ 17 kDa.
Examples of target molecules are molecular targets such as peptides, proteins, hormones,
and enzymes. The terms "analyte" and "target" are used interchangeably in the context
of the present application.
[0014] The term "homologue" as used herein, shall refer to peptides or proteins substantially
similar to said peptide or protein. The term "substantially similar" is well understood
by the person skilled in the art. In particular, a variant may be an isoform or allele
which shows amino acid exchanges compared to the amino acid sequence of the most prevalent
peptide isoform in the human population. Preferably, such a substantially similar
peptide has a sequence similarity to the most prevalent isoform of the peptide of
at least 70%, preferably at least 80%, 85%, 90%, 95%, 97%, 98 or 99%. Substantially
similar are also degradation products, e.g. proteolytic degradation products, which
are still recognized by the binding moieties such as antibodies or by ligands directed
against the respective full-length peptide. The term "variants" is also meant to relate
to splice variants.
[0015] The term "solid substrate" as used herein, shall refer to the substrate to which
the capture moieties which are not specific for the same epitope are bound. The terms
"solid substrate" and "solid support" are used interchangeably in the context of the
present application.
[0016] The term "binding moiety", as used herein, shall refer to epitope-specific detection
moieties, or capture moieties which are not specific for the same epitope, respectively.
[0017] The term "epitope-specific detection moiety", as used herein, shall refer to at least
one moiety which binds to one and the same epitope of a given target, e.g. an analyte
protein.
[0018] Such epitope-specific detection moiety is for example a monoclonal antibody, an epitope-specific
aptamer, an epitope-specific anticalin, an epitope-specific lectin, an epitope-specific
affibody, an epitope-specific chemical ligand or an epitope-specific peptide. The
terms "epitope-specific detection moiety" and detection moiety are used interchangeably
in the context of the present application.
[0019] The term "capture moieties which are not specific for the same epitope", as used
herein, shall refer to a collection of at least two moieties which bind to different
epitopes of a given target, or to different subregions of the same epitope of a given
target. Two moieties, from which one binds to amino acids 1 - 10 of an epitope of
a given target, whereas the second binds to amino acids 2 - 11 of the same epitope,
do thus qualify as "capture moieties which are not specific for the same epitope"
in the meaning of the present invention.
[0020] Such capture moieties which are not specific for the same epitope are for example,
a polyclonal antibody (which is, despite the use of the singular form, a plurality
of at least two different antibodies), an affinity-purified polyclonal antibody (again,
a plurality of at least two different antibodies), non epitope-specific aptamers,
non epitope-specific anticalins, non epitope-specific lectins, non epitope-specific
affibodies, non epitope-specific chemical ligands or non epitope-specific peptides.
The terms "capture moieties which are not specific for the same epitope"and "capture
moieties" are used interchangeably in the context of the present application.
SUMMARY OF THE INVENTION
[0021] The present invention is defined in its broadest sense by the appended claims.
[0022] It is an object of the invention to provide a method for the detection of an analyte
in a sample comprising the steps of:
- 1. a). adding magnetic particles conjugated to detection moieties specific for at
least one epitope of an analyte to a sample suspected to contain said analyte, wherein
said magnetic particle has a size of ≥ 50 nm and ≤ 5000 nm;
- 2. b). exposing the sample with said particles to a sensor surface containing capture
moieties bound to a solid substrate which are a collection of at least two moieties
which bind to different epitopes of the analyte, or to different subregions of the
same epitope of the analyte;
- 3. c). permitting complex formation of said detection moieties, analyte and capture
moieties;
- 4. d). removing unbound particles; and
- 5. e). detecting the number of bound detection moieties; wherein the analyte is a
peptide or protein with a) ≥ 20 and ≤ 180 amino acid residues, and/or b). a molecular
weight of ≥ 2 and ≤17 kDa.
[0023] In a further embodiment of said method the magnetic particle comprises an optical
or a non-optical marker.
[0024] In an embodiment the analyte is Brain natriuretic peptide (BNP) and/or NT-proBNP.
[0025] In a further embodiment the sample is a body fluid or a tissue sample.
[0026] In another preferred embodiment the epitope specific detection moiety is a monoclonal
antibody.
[0027] In an embodiment the capture moieties are a polyclonal antibody.
[0028] In a further embodiment the solid substrate has essentially a shape selected from
the group consisting of beads, strips, slides and/or chips
[0029] Further preferred are solid substrates comprising at least one material selected
from the group consisting of latex, plastic, gold, silicon, silicon nitride and/or
glass.
[0030] In an embodiment the magnetic particle is detected with an optical or non-optical
detection method
[0031] Preferably, said detection method is performed with FTIR.
[0032] Also disclosed is a kit of parts suitable for detecting an analyte in a sample, comprising
a) capture moieties, which are a collection of at least two moieties which bind to
different epitopes of a given target, or to different subregions of the same epitope
of a given target, bound to a solid substrate, and b). an epitope specific detection
moiety bound to a detectable marker, wherein the detectable marker to which the epitope
specific detection moiety is bound is a large particle marker having a particle size
of ≥ 50 nm and ≤ 5000 nm.
[0033] It is vital that the capture moieties which are not specific for the same epitope
bind to at least two different epitopes of a given target, or to different subregions
of the same epitope of a given target.
[0034] The inventors have surprisingly found that the use of capture moieties which bind
to different epitopes of a target is highly effective for improving the sensitivity
of an immunoassay, when large particle markers are used for labeling the detection
moieties, particularly in case a relatively small target is to be detected.
[0035] The inventors have found that the use of a large particle marker results in a loss
of rotational freedom of the complex of epitope-specific detection moiety, target
and large particle marker. Furthermore, the translational and/or diffusional speed,
which is dependent on the particle radius, is also reduced for large particle markers.
[0036] Due to the bulk size of the marker the complex of epitope-specific detection moiety,
target and large particle marker cannot move and rotate as fast as a complex of epitope-specific
detection moiety and target having a small marker. This is detrimental in a setting
where the assay time is short, as some of the capture moieties do not have enough
time to couple to the target bound to the epitope-specific detection moiety carrying
a large particle marker. Accordingly not all complexes of epitope-specific detection
moiety, target and large particle marker will be coupled to a capture moiety and thus
to the solid support. These unbound complexes will be removed in a washing step, which
leads to a reduced sensitivity of the assay.
[0037] The above described effects for large labels are even more pronounced when a detection
moiety with a large label is used to detect a small target, as this will further reduce
the degrees of freedom of complex of epitope-specific detection moiety, target and
large particle marker to move into the right position to bind to the capture moiety.
[0038] Before this background, the inventors of the present invention surprisingly found
that it is extremely helpful when capture moieties which are not specific for the
same epitope are used as a capture moieties. As the capture moieties which are not
specific for the same epitope bind to different epitopes of the analyte, they can
thus bind analytes no matter what position, or angle, they take in. This means that
the loss of rotational freedom caused by the large labels carried by the detection
moiety is compensated by the use of capture moieties which are not specific for the
same epitope. The above described effect will be even more pronounced if one marker
carries more than one detection moiety and accordingly more than one analyte is bound
to one marker.
[0039] The capture moieties which are not specific for the same epitope and the detection
moiety preferably bind to different sites (epitopes) of an analyte.
[0040] In one embodiment the capture moieties which are not specific for the same epitope
bound to the solid support are directed to at least two different epitopes or at least
two different subregions of the same epitope on the analyte. Most preferred the capture
moieties which are not specific for the same epitope are directed to between ≥ 2 and
≤ 10 different epitopes or different subregions of the same epitope. Preferably the
capture moieties which are not specific for the same epitope are a polyclonal antibody.
In a preferred embodiment the capture moieties which are not specific for the same
epitope are a sheep polyclonal antibody, and/or a goat or rabbit polyclonal antibody.
[0041] In preferred embodiment, the analyte is a cardiac hormone. More preferred, the cardiac
hormone is a natriuretic peptide. The peptide may be BNP and/or NT-pro BNP. Most preferred,
the peptide is human BNP and/or human NT-pro BNP.
[0042] Brain natriuretic peptides (BNP) and the related molecule NT-proBNP are substances
that are released into the blood stream and are used to diagnose and monitor heart
failure.
[0043] The determination of BNP and/or NT-proBNP has strict requirements in precision and
high requirements for sensitivity as patient blood levels of BNP and/or NT-proBNP
at several picomolar or above have important clinical consequences. Because of the
urgent nature of heart failure, it is desirable to have a test that is able to deliver
lab-quality results in a short time that can be used in point-of-care settings such
as an emergency department or an ambulance.
[0044] The pre-pro peptide of BNP (pre-proBNP) has 134 amino acids and comprises a short
signal peptide, which is enzymatically cleaved off to release the pro peptide (proBNP)
a having108 amino acids. The pro peptide is further cleaved into BNP, comprising amino
acids 77-108 of proBNP and an N-terminal pro peptide (NT-proBNP). NT-proBNP is a small
peptide consisting of only 76 amino acid residues having a molecular weight of about
8.5 kDa. BNP is an even smaller peptide of 32 amino acids having a molecular weight
of about 3.5 kDa.
[0045] When the target is human proBNP or human NT-proBNP, the capture moieties which are
not specific for the same epitope are directed to at least one epitope selected from
the group consisting of amino acids residues 1-12, 1-21,5-12,13-27, 28-45, 39-50,
46-60 and/or 61-76.
[0046] Preferably the epitope-specific detection moieties are directed to at least one epitope
selected from the group consisting of amino acids residues 1-10, 5-12, 11-22, 13-27,
26-32 and/or 61-76.
[0047] Particularly preferred, at least two the epitope-specific detection moieties are
being used out of which one detects a BNP epitope and the other detecs a NT pro BNP
epitope.
[0048] The detectable marker to which the detection moiety is bound is a large particle
marker. The particles may have a size between ≥ 50 nm and a few micrometers, more
preferred between ≥ 50 nm and ≤ 5000 nm, such as between ≥ 250 nm and ≤ 5000 nm. Most
preferred the particle size is between ≥ 500 nm and ≤ 1000 nm.
[0049] The terms "large particle label" or "label" and "large particle marker" or "marker"
are used interchangeably in the context of the present application.
[0050] When large particle markers are used in an Immunoassay this will reduce the mobility
the epitope-specific detection moieties, leading to a loss in binding efficiency of
the large particle marker to the solid surface.
[0051] The reason for this unprecedented effect is that as the degree of freedom of the
epitope-specific detection moieties bound to large particle markers are limited. This
means that the speed of rotation of a complex consisting of a large particle marker
carrying at least one epitope-specific detection moiety with a bound target is substantially
restriced. This may lead to a situation in which the marker/detection moiety/target
complex can not bind to an epitope-specific capture moiety, as the rotational angle
of the former does not allow a binding between the capture moiety and the respective
target epitope.
[0052] For this reason, the inventors have surprisingly found that it is beneficial to use
capture moieties which are not specific for the same epitope, such as a polyclonal
antibody. The latter allows binding of the marker/detection moiety/target complex
no matter what rotaional angle the latter has, and thus faciliates the binding of
a marker/detection moiety/target complex the rotational degree of freedom of which
is reduced due to large marker size.
[0053] In the context of the present invention, it is desirable to use capture moieties
which are not specific for the same epitope when a large particle marker is used,
as the capture moieties which are not specific for the same epitope enhance the sensitivity
of an Immunoassay by improving the binding efficiency of the large particle marker
to the solid surface.
[0054] In another preferred embodiment of the Immunoassay according to the invention the
detectable marker to which the epitope-specific detection moiety is bound may be an
optical or a non-optical marker. Preferably, the optical marker is at least one selected
from the group consisting of light scattering markers, enzymatic markers, fluorescent
markers, chromophoric groups, electroluminescent markers, chemiluminescent markers,
phosphorescent markers, reflecting markers and/or radioactive markers.
[0055] Fluorescent markers include fluorescein dyes, such as 5- (and 6-) carboxy-4',5'-dichloro-2',7'-dimethoxyfluorescein,
5-carboxy-2',4',5',7'-tetrachlorofluorescein and 5 carboxyfluorescein, rhodamine dyes
such as 5- (and 6-) carboxy rhodamine, 6-carboxytetramethyl rhodamine and 6-carboxyrhodamine
X, phthalocyanines such as methyl, nitrosyl, sulphonyl and amino phthalocyanines,
azo dyes, azomethines, cyanines and xanthines such as the methyl, nitro, sulphano
and amino derivatives, and succinylfluoresceins. Other suitable labels are fluorophores
from the group of cyanine dimers and monomers, such as TOTO, YOYO, TO-PRO, Cy3, Cy5,
Cy5.5, Cy7 etc., or dyes such as LCRod 705 may be used as the fluorescent marker.
Other fluorescent markers are fluorescent proteins, like GFP and the like.
[0056] A light scattering marker is preferably used in case FTIR (Frustrated total internal
reflection) is used as a detection technique, the latter being described below. Light
scattering occurs, for example, when a beam of light passes through a colloidal dispersion,
as the particles or droplets scatter some of the light in all directions. When the
particles are very small compared to the wavelength of the incident light, than the
intensity of the scattered light is uniform in all directions (Rayleigh scattering).
For larger particles (above approximately 250nm diameter), the intensity is angle
dependent (Mie scattering).
[0057] Such light scattering marker is, for example, a bead with a diameter of greater than
250 nm, so that it can scatter incoming light in an angel dependent manner. These
beads are opaque, in such way that they do not transmit light. They can, for example,
be made of dyed plastics, metal and the like.
[0058] A large label having a size of greater than 250 nm is preferred when a light scattering
marker is used. As mentioned above the use of a large marker will lead to a reduced
freedom of rotation of the epitope-specific detection moieties bound to the large
particle markers.
[0059] In a preferred embodiment, the detectable marker is a magnetic marker, or a marker
linked to a magnetic particle. The use of magnetic markers as detectable markers is
preferred as they enable to speed up the reaction kinetics by use of magnetic actuation,
thus reducing the assay time. In addition the use of magnetic markers facilitates
improving the sensitivity of the assay by using pulsed magnetic actuation. Moreover,
the use of magnetic markers enables binding of the detection moiety-target complex
to the solid support. Furthermore the use of magnetic labels facilitates removal of
any label, bound or unbound to the detection moiety, that is not bound to the sensor
surface via a magnetic field. This embodiment abolishes the need for additional washing
steps to identify specific signal versus background binding.
[0060] Accordingly the detectable marker can also be used as a handling agent facilitating
the binding of the detection moiety-target complex to the solid support. Preferably
the detectable marker thus double-acts as a handling agent.
[0061] When the magnetic marker is used as detectable marker, the magnetic marker may be
detected optically or magnetically. Preferably the magnetic marker is optically detected,
preferably by frustrated total internal reflection (FTIR).
[0062] The nature of the magnetic marker, or particle, used in the context of the present
invention is not critical. Suitable magnetic labels include completely inorganic labels
and labels which comprise a mixture of an inorganic and an organic material (e.g.
a polymer). Magnetic labels are commercially available from e.g. Dynal, Estapor, Seradyn
and are widely used in biological analysis that are available from several diagnostic
companies.
[0063] Attachment of the magnetic label to the epitope-specific detection moiety can be
performed by methods described in the art. For instance, the magnetic label may carry
one or more functional groups such as hydroxyl, carboxyl, aldehyde or amino groups.
These may in general be provided, for example, by treating uncoated monodisperse,
[0064] superparamagnetic labels, to provide a surface coating of a polymer carrying one
of such functional groups, e. g. polyurethane together with a polyglycol to provide
hydroxyl groups, or a cellulose derivative to provide hydroxyl groups, a polymer or
copolymer of acrylic acid or methacrylic acid to provide carboxyl groups or an aminoalkylated
polymer to provide amino groups. The coupling of an epitope-specific detection moiety
to a particle can be irreversible but can also be reversible by the use of a linker
molecule for the crosslinking between label and epitope-specific detection moiety.
Examples of such linkers include peptides with a certain proteolytic recognition site,
oligonucleotide sequences with a recognition site for a certain restriction enzyme,
binding partners such as streptavdin/biotin, or chemical reversible crosslinking groups
as those comprising a reducible disulfide group. A variety of reversible crosslinking
groups can be obtained from Pierce Biotechnology Inc. (Rockford, IL, USA).
[0065] The non-optical label may be an acoustic label.
[0066] In the Immunoassay according to the invention the analyte is a small peptide or protein.
As used herein, the term "small peptide or protein" refers to a peptide or protein
with ≥ 20 and ≤ 180 amino acid residues. BNP has, for example, 32 amino acid residues
(3.47 kD), while NT-proBNP has 76 amino acid residues (8.46 kD). Likewise, the term
"small peptide or protein" refers to a peptide or protein with a molecular weight
of ≥ 2 and ≤ 17 kDa.
[0067] It is important for the understanding of the present invention that the above described
effects for large labels are even more pronounced, when a detection moiety with a
large label is used to detect a small target. When the combination of large marker
and small target is used, the degrees of rotational freedom will be limited more dramatically
than in case a large marker is used to detect a large target. Accordingly the detection
moiety/target complex will require more time to move into the right position to bind
to the capture moiety and thus to the solid support. Thus even less target proteins
will be coupled to the solid support in a setting where a short assay time is used.
These unbound target proteins will be removed in a washing step, which leads to a
reduced sensitivity of the assay. This will be detrimental in point-of-care settings,
where small sample volumes, ease of use, speed and high sensitivity are required.
[0068] Preferably the peptide is a cardiac hormone. More preferred the cardiac hormone is
a natriuretic peptide. The peptide may be BNP and/or NT-pro BNP. Particularly the
peptide is human BNP and/or human NT-pro BNP.
[0069] As mentioned above, NT-proBNP is a small peptide consisting of only 76 amino acid
residues having a molecular weight of about 8.5 kDa. BNP is an even smaller peptide
of 32 amino acids having a molecular weight of about 3.5 kDa.
[0070] This property is highly disadvantageous when NT-proBNP or BNP containing large particles
are required to bind to a solid sensor surface through this small peptide for detection.
Like described above, small target proteins, such as NT-proBNP and/or BNP, require
more time to move into the right position to bind to the capture moiety and thus to
the solid support when coupled to a large marker, as the degrees of rotational freedom
for the detection moiety-target complex are highly limited in this situation.
[0071] Before this background, the inventors have surprisingly found that it is highly beneficial
to use capture moieties which are not specific for the same epitope, such as a polyclonal
antibody, for the determination of NT-proBNP. The use of capture moieties which are
not specific for the same epitope allow for binding of the marker/detection moiety/target
complex no matter what rotaional angle the latter has, and thus faciliates the binding
of a marker/detection moiety/target complex the rotational degree of freedom of which
is reduced due to the large size of the marker and the small size of NT-proBNP.
[0072] In one embodiment the analyte is contained in a sample. The term "sample" is used
in a broad sense herein and is intended to include a wide range of biological materials
as well as compositions derived or extracted from such biological materials. Preferably
the analyte is contained in a body fluid or tissue sample, and the amount of the analyte
in the sample is measured.
[0073] In a preferred embodiment the analyte can be measured in tissue, cell, and body fluid
samples, i.e. preferably in vitro. Preferably, the analyte of interest is measured
in a body fluid sample. A tissue sample according to the present invention refers
to any kind of tissue obtained from the dead or alive human or animal body. Tissue
samples can be obtained by any method known to the person skilled in the art, for
example by biopsy or curettage.
[0074] Body fluids according to the present invention may include blood, blood serum, blood
plasma, lymphe, cerebral liquor, saliva, mucus, semen, stool, spinal fluid, urine
and/or sputum or any fraction thereof. Particularly, the body fluid is at least one
selected from the group consisting of blood, blood serum, blood plasma, urine, salvia
and/or sputum. Samples of body fluids can be obtained by any method known in the art.
Exemplary samples include whole blood, red blood cells, white blood cells, buffy coat,
hair, nails and cuticle material, swabs, including but not limited to buccal swabs,
throat swabs, vaginal swabs, urethral swabs, cervical swabs, rectal swabs, lesion
swabs, abscess swabs, nasopharyngeal swabs, nasal swabs and the like, lymphatic fluid,
amniotic fluid, cerebrospinal fluid, peritoneal effusions, pleural effusions, fluid
from cysts, synovial fluid, vitreous humor, aqueous humor, bursa fluid, eye washes,
eye aspirates, plasma, serum, pulmonary lavage, lung aspirates, biopsy material of
any tissue in the body. The skilled artisan will appreciate that lysates, extracts,
or material obtained from any of the above exemplary biological samples are also considered
as samples. Tissue culture cells, including explanted material, primary cells, secondary
cell lines, and the like, as well as lysates, extracts, supernatants or materials
obtained from any cells, tissues or organs, are also within the meaning of the term
biological sample as used herein. These lists are not intended to be exhaustive.
[0075] In particular embodiments of the invention, the sample is pre-treated to facilitate
the detection of the sample with the detection method. For instance, typically a pre
treatment of the sample resulting in a semi-isolation or isolation of the target is
envisaged. Many methods and kits are available for pre-treating samples of various
types. Mostly preferred the sample is blood.
[0076] The epitope-specific detection moiety may be a monoclonal antibody, an affinity purified
polyclonal antibody, an epitope-specific aptamer, an epitope-specific anticalin, an
epitope-specific lectin, an epitope-specific affibodiy, an epitope-specific chemical
ligand or an epitope-specific peptide. Most preferred the epitope-specific detection
moiety is a monoclonal antibody.
[0077] By using detection moieties that all bind to the same epitope, the formation of complexes
in the medium can be avoided. When large particle labels are used, more than one detection
moiety can be bound to one label particle. In case the detection moieties would bind
to different epitopes, it can occur that different detection moiety-label komplexes
bind to more than one target. This may led to the formation of large complexes which
eventually might precipitate. Detection moieties that are specific to the same epitope
or subregions of the same epitope avoid that problem as they always bind to the same
epitope.
[0078] The detection moiety may be linked to the large particle label in any suitable way.
This linking may be done by any suitable method such as covalent linking or non-covalent
linking or adsorption. The Ademtech protocol, known for a person skilled in the art,
can be used for linking magnetic labels to the epitope-specific detection moiety.
In this protocol, a detection moiety, such as a monoclonal antibody at a concentration
of for example 20 ug antibody/mg magnetic label is coupled to 25 carboxylated magnetic
labels in the presence of EDC (1-Ethyl-3-(3-dimethylaminopropyl)-carbodiimide).
[0079] When the target is human proBNP or human NT-proBNP, the capture moieties which are
not specific for the same epitope are directed to at least one epitope selected from
the group consisting of amino acids residues 1-12, 1-21, 5-12, 13-27, 28-45, 39-50,
46-60 and/or 61-76.
[0080] Preferably the epitope-specific detection moieties are directed to at least one epitope
selected from the group consisting of amino acids residues 1-10, 5-12, 11-22, 13-27,
26-32 and/or 61-76.
[0081] Particularly preferred, at least two the epitope-specific detection moieties are
being used out of which one detects a BNP epitope and the other detecs a NT pro BNP
epitope.
[0082] In a preferred embodiment the solid substrate has essentially a shape selected from
the group consisting of beads, strips, slides and/or chips. Furthermore, the surface
can be flat, curved, porous or structured, e.g. in order to achieve a structured optical
surface for enhanced sensitivity when using optical detection techniques.
[0083] The solid substrate may be the surface of a sensing device. Typically, the surface
of the sensing device is a solid, uniform surface. The surface can be a sensor surface,
i.e. a surface which is involved in detection. Alternatively, the sensor can be located
in the vicinity e.g. under the surface of the sensing device, allowing detection of
labels present close to the detection surface.
[0084] The sensing device may be any sensing device suitable for detecting a label. Suitable
sensing devices may be non-optical sensing devices or optical sensing devices. The
non-optical sensing device may be capable of detecting a non-optical signal such as,
but not limited, to a magnetic signal, magnetoresistance and/or a Hall effect. The
optical sensing device may be capable of detecting an optical signal such as reflection,
absorption, scattering, fluorescence, radioactivity, chemiluminescence, RAMAN and/or
FTIR.
[0085] Frustrated total internal reflection is a phenomenon which occurs in cases wherein
an evanescent wave extends across a separating medium into a region occupied by a
higher index of refraction material, energy may flow across the boundary. This phenomenon
is similar to quantum mechanical tunneling or barrier penetration. When transmission
across the boundary occurs in this manner, the "total internal reflection" is no longer
total since the transmitted wave comes at the expense of the internally reflected
one.
[0086] In practise, a light beam is directed to a glass slide, wher total reflection occurs.
However, part of the light enters the glass slide and creates an evanscent field.
Scattering markers which are close to the glass slide cause light scattering within
the evanescent field and are thus detectable with a respective device, e.g, a CCD
camera.
[0087] The applicant has, in prior inventions, for the first time disclosed the use of a
frustrated total internal reflection technique in diagnostic assays. It has turned
out that this method provides high sensitivity, short assay times and requires only
small sample volumes. This is an advantage in point-of-care settings where speed and
high sensetivety are reqiered.
[0088] In particular embodiments detection means are capable of detecting an non-optical
signal such as an acoustical signal (quartz crystal microbalance (QCM), surface acoustic
waves (SAW) or Bulk Acoustic Wave (BAW) etc.). Such acoustic signals may be generated
by vesicles such as liposomes, micelles, or bubbles. Such vesicles may be filled with
a liquid, a gas, a gaseous precursor, and/or a solid or solute material.
[0089] Depending on the nature of the signal to be detected, the detection surface can be
an integral part of the detection means (sensor surface) or can allow the detection
of the presence of labels on its surface.
[0090] In one example, radioactive labels, such as e.g. luminescent or fluorescent labels,
are embedded in or attached to the labels that are used. Excitation of the fluorescent
labels can be done using an irradiation source, such as for example via focused laser
beam or via evanescent field excitation allowing optical detection of such labels.
Detection can be done in any suitable way, such as for example using confocal detection
or using a high-NA lens. The use of fluorescent labels enables multiplexing by using
different fluorophores, which differ in excitation and/or emission wavelengths.
[0091] Optical detection can be done also by Surface-Enhanced Resonance Raman spectroscopy
(SERRS). SERRS is an ultra-sensitive method for detection of molecules or species
by adsorption of the molecule or species that is optically labeled on colloidal labels,
e.g. silver particles. The optical label is a suitable dye molecule (such as Rhodamine)
causing plasmon and dye resonance when the colloidal particles cluster in a controlled
way. It is known that for example magnetic labels exist with a metallic coating. If
a target, such as for example an antigen (to which the binding moieties, i.e. antibodies,
bind) is coupled to such silver-coated magnetic label, while the target is also coupled
to a suitable dye, target-specific binding moieties will lead to linking of the dye
to the silver-coated magnetic labels. Magnetic actuation will lead to cluster/pillar
formation which will lead to dye resonance. SERRS can be detected after actuation
to a non-binding sensor surface in an evanescent field. In such a set-up, binding
moiety detection can be done in a single chamber omitting fluid wash steps since the
detection is surface specific and not disturbed by unbound dyes from solution. In
another example, a magnetic sensor may be used, such as for example a Hall sensor,
a magnetoresistive sensor such as for example an GMR, TMR or AMR sensor. In a particular
example, the magnetic sensing may take advantage of the fact that a particular frequency
may be used for the applied AC magnetic field. In the low frequency regime, i.e. at
frequencies e.g. below 100 Hz, the 1/f noise of the magnetic sensor element dominates.
1/f noise is caused by point-to-point fluctuations of the current and is proportional
to the inverse of the frequency. In magnetoresistive sensors, 1/fnoise originates
from magnetic fluctuations in the free layer. When the frequency of the generated
AC magnetic field is 100 Hz or above, the dominating 1/f noise is significantly reduced
compared to the prior art, resulting in an improved signal to noise ratio (SNR). It
is advantageous when the frequency of the AC magnetic field is further increased to
a value where the thermal white (Nyquist) noise level becomes dominant over the 1/f
noise level. Above a certain corner frequency fc » 50 kHz the thermal white noise
of GMR sensors becomes dominant. The white-noise level limits the theoretically achievable
detection limit.
[0092] As mentioned above the detection of magnetic labels at a detection surface can be
ensured by any direct or indirect method known in the art. Particular detection methods
are based on the magnetic properties of the label such as GMR or on optical properties
of the magnetic labels, such as detection with frustrated total internal reflection
(FTIR). Miniaturised GMR sensor chips, integrated in disposable flow-cell cartridges,
are suitable for performing the methods of the present invention, and can detect a
label density of three 300 nm labels on a 1500 µm
2 chip surface.
[0093] In another preferred embodiment the so lid substrate comprises at least one material
selected from the group consisting of latex, plastic, gold, silicon, silicon nitride
and/or glass.
[0094] The capture moieties which are not specific for the same epitope may be linked to
the solid support in any suitable way. This linking may be done by any suitable method
such as covalent linking or non-covalent linking or adsorption. For example the capture
moieties which are not specific for the same epitope may be bound to the solid support
by inkjet printing, microcontact printing, immersion coating (in a bulk solution)
and/or drop coating (from a nano or micropipette).
[0095] In an embodiment of the invention, the epitope-specific detection moiety bound to
the magnetic label and the capture moieties which are not specific for the same epitope
bound to the sensor surface are present within a cartridge. As the reagents for the
assay are already present within the cartridge, the user only needs to add the sample
fluid via the sample inlet, which redisperses the reagents and labels to produce the
intended buffer conditions. The dry reagents preferably include the buffer components
necessary for the assay and the magnetic labels with the epitope-specific detection
moiety. The components of the dry reagents can be deposited and dried individually
at different location in the cartridge or together at the same location. The reagents
can be deposited via several drying techniques including lyophilization. Lyophilization
prevents the formation of crystals and allows the reagents to be dried to an amorphous
glassy state that is readily redispersed upon the addition of a fluid. The cartridge
preferably is suitable detection of the large particle label. Mostly preferred the
cartridge is suitable for optical detection of the magnetic labels.
[0096] Preferably, the detectable marker is detected with an optical or non-optical detection
method. In a further preferred embodiment the detectable marker is detected with at
least one method selected from the group consisting of frustrated total internal reflection
(FTIR), luminescence measurement, fluoresence measurement, absorbance measurement,
weight measurement, and/or glass radioactivity measurement.
[0097] Furthernore, it is preferred that the detectable marker is a magnetic marker, and/or
that the detectable marker is detected with FTIR.
[0098] In particular embodiments of the method described in the present invention, the optimization
of target-binding moiety interaction is achieved by magnetic actuation; applying a
magnetic field directed towards the detection surface and/or pulsed magnetic actuation
forces to the magnetic labels carrying the epitope-specific detection moiety during
the assay to ensure optimized contact with the detection surface. Magnetic labels
can be manipulated in different ways to optimise contact with the immobilized binding
moieties. In particular embodiments, magnetic actuation in the assay is performed
as follows.
[0099] In a first step, the labels with the epitope-specific detection moiety are rapidly
attracted to the sensor surface in a "collection" step. This is ensured by applying
a magnetic field in the direction of the sensor surface. In particular embodiments
the magnetic field ensures that the magnetic labels have reached the sensor surface,
for instance such as to reach at least 50%, 75% or 90% of monolayer formation on the
surface, preferably 100% monolayer formation. In a second step, the magnetic forces
are removed and the labels are allowed to move over the surface with essentially unhindered
translational as well as rotational degrees of freedom. After a certain time diffusion
occurs and, in particular embodiments it is envisaged that the oriented magnetic field
of the first step is once again applied. These steps can be repeated several times
to ensure that all magnetic labels with the target bound to the epitope-specific detection
moieties are bound to the non epitope-specific detection moieties on the detection
surface. By this alternation of on/off of the magnetic field, pulsed actuation is
obtained.
[0100] In alternative embodiments of the magnetic actuation conditions envisaged herein,
the rotation and translation at the detection surface is not merely a result of passive
diffusion in the absence of a magnetic field, but is actively ensured by the application
of one or more magnetic fields which ensure the movement of magnetic labels over the
detection surface.
[0101] In particular embodiments the magnetic force enabling the movement of magnetic labels
over the detection surface is ensured by pulsed actuation of the labels. This can
involve e.g. alternating the direction of a magnetic field perpendicular to the detection
surface or parallel to the detection surface or a combination of different fields
with different orientations. The time and duration of each pulse is designed based
on the label size so as to optimally allow the label to undergo at least one full
rotation over its axis over the binding surface. In particular embodiments, the actuation
forces are essentially perpendicular to the surface as strong forces parallel with
the sensor surface can remove specifically bound magnetic labels.
[0102] In methods described herein it is optionally envisaged that, after the contacting
of the magnetic labels with the detection surface through magnetic actuation, a magnetic
force is applied directing the labels away from the detection surface to ensure the
removal of unbound labels. In this way additional washing steps for removal of the
magnetic label are no longer necessary.
[0103] It has been found that methods involving pulsed actuation alternated with translational
and rotational movement of magnetic labels on the detection surface are significantly
more efficient than methods which involve only a constant magnetic force attracting
the labels to the detection surface. The pulsed actuation also reduces the probability
that labels irreversibly aggregate as the amount of time that the labels are in contact
with one another is also reduced.
[0104] A preferred actuation scheme consists of about 1 minute incubation of the sample
with the cartridge and magnetic labels followed by about 4 minute pulsed actuation
and about 10 second label removal with a top coil.
[0105] The Immunoassay may be carried out in any assay format that is suitable. For example
the immunoassay may be carried out as a sandwich assay, a competitive immunoassay
or as an inhibition assay.
[0106] The assay may also be carried out as competitive assay format in which the most prevalent
isoform of the peptide or protein compete with homologues of said peptide or protein
that are immobilized on the large particle lable for polyclonal binding sites on the
solid support. When NT-proBNP is used as target, NT-pro BNP compete with NT-pro BNP-homologues
that are immobilized on the large particle label for polyclonal binding sites on the
solid support.
[0107] The assay is carried out in the 1-step format comprising the steps of:
- 1. a) adding magnetic particles conjugated to the detection moieties to the sample
suspected to contain the analyte,
- 2. b) exposing the sample with particles to the sensor surface containing the capture
moieties and
- 3. c) permitting complex formation of detection moieties, analyte and capture moieties.
- 4. d) removing unbound particles and
- 5. e) detecting the number of bound detection moieties
[0108] In another aspect the invention provides a method for the dection of analytes in
a sample, wherein an Immunoassay as described above is used. The level or concentration
of a suitable analyte can indicate the presence or absence of a condition, disease,
or complication, and thus allow diagnosis and/or monitoring of said condition, disease
or complication. In particular the method is used to diagnose and/or monitor heart
failure.
[0109] The assay times may be less than ≤ 5 minutes. The sample volumes may be smaller than
≤ 30µL, such as for example between ≥ 1µL and ≤ 30µL.
[0110] The label, or marker, which is used for these purposes is a label as set forth above.
Preferably the marker is a magnetic label. These magnetic labels have, however, a
relatively large size, preferably in the range of ≥ 50 nm and ≤ 5000 nm.
[0111] Furthermore, is disclosed a biosensor device capable of detecting an analyte in a
sample according to the method according to the invention. Such biosensor is optimally
suited for mobile use, e.g. as a handheld device, and allows quick detection of analytes
which are abundant only in small concentrations.
[0112] Disclosed is also a kit of parts suitable for detecting an analyte in a sample, comprising
- 1. a) capture moieties which are not specific for the same epitope bound to a solid
substrate, and
- 2. b) an epitope-specific detection moiety bound to a detectable marker,
wherein the detectable marker to which the epitope-specific detection moiety is bound
is a large particle marker having a particle size of ≥ 50 nm and ≤ 5 5000 nm.
[0113] It should be clear that the preferred embodiments set forth in connection with the
method according to the invention are also applicable with the kit of parts mentioned
above.
BRIEF DESCRIPTION OF THE DRAWINGS
[0114] These and other aspects of the invention will be apparent from and elucidated with
reference to the embodiments described hereinafter.
[0115] In the drawings:
Fig. 1 shows the principle set forth in an immunoassay 10 according to the invention.
The assay comprises capture moieties comprising at least two moieties 11,12 which
are not specific for the same epitope of an analyte 13. The capture moieties are bound
to a solid substrate 14. The assay further comprises at least one epitope-specific
detection moiety 15 which is bound to a detectable marker 16. The two moieties 11,
12 are not specific for the same epitope of an analyte but belong to the same polyclonal
antibody. The epitope-specific detection moiety is a monoclonal antibody.
The detectable marker 16 to which the epitope-specific detection moiety 15 is bound
is a large particle marker having a particle size of ≥ 50 nm and ≤ 5000 nm. It can
be an optical or non-optical marker, for example a light scattering marker. Furthermore,
the marker can serve as a handling agent, for example if it has magnetic properties.
Due to the large size of the marker, the marker/detection moiety/analyte complex has
a limited rotational degree of freedom, as symbolized by the dotted arrow. This is
however accounted for by the use of capture moieties which are not specific for the
same epitope comprising at the least two moieties 11, 12 which are not specific for
the same epitope of the analyte 13. Therefore, the marker/detection moiety/target
complex can bind to the substrate even if it has not a fixed rotational angle with
respect to the substrate. This increases speed and sensitivity of the assay, and makes
it thus useful for appliances wherin
- a) large markers are being used (like light scattering markers)
- b) small analytes are being detected (like NT-proBNP or BNP)
- c) analysis has to be done quickle (as required in emegrency devices, particularly
handheld devices), and
- d) the analyte is abundant only in small quantities (pg/ml - ng/ml scale, as it is
the case for NT-proBNP and BNP)
Fig. 2 shows the problem which occurs in immunassays according to the state of the
art. Here, the immunoassay 20 comprises only one type of epitope specific capture
moiety 21, namely a monoclonal antibody specific for an epitope of an analyte 22.
The monoclonal antibody 21 is bound to a solid substrate 23. The assay further comprises
at least one epitope-specific detection moiety 24 which is bound to a detectable marker
25. The complex can only bind to the epitope specific capture moiety 21 if it has
the right rotational angle (see left portion of Fig. 2). Due to the large size of
the marker, the marker/detection moiety/analyte complex has a limited rotational degree
of freedom. Therefore, in case the rotational angle of marker/detection moiety/analyte
complex is not correct, the complex cannot bind to the solid substrate 23. This reduces
speed and sensitivity of the assay, particulatrly in cases when at least one of the
conditions a) - d) as decsribed above are met.
Fig. 3 gives an overview over the magnetic approach according to a preferred embodiment
of the invention. In this case, the marker/detection moiety/analyte complex has magnetic
properties, either because of the fact that the marker is magnetic (it then double-acts
as a marker and a handling agent) or becauise a magentic agent is added to the complex.
In step a), marker/detection moiety/analyte complexes 31 are attracted to the solid
substrate 32 by a magnetic field applied by a magnetic actuator 33. Furthermore, marker/detection
moieties 34 not carring an analyte are attracted to the solid substrate as well as
marker/detection moieties 35 which have bound, e.g. by unspecific binding, a different
target. The solid substrate has capture moieties comprising at least two moieties
36, 37 which are not specific for the same epitope of the analyte bound in the marker/detection
moiety/analyte complexes 31.
In step b), the marker/detection moiety/target complexes 31 bind to moieties 36, 37
even if they have different rotational angles with respect to the substrate. The free
marker/detection moieties 34 and the marker/detection moieties 35 having bound a different
target,bind to the solid substrate as well due to magentic forces.
In step c), the magerntic field of the magnetic actuator is reversed, thus repelling
all magnetic agents not spcifically bound to the solid substrate. Therfore, the free
marker/detection moieties 34 and the marker/detection moieties 35 having bound a different
target are released, while the marker/detection moiety/target complexes 31 specifically
bound to the substrate are retained, and can then be detected, e.g. by the FTIR technique.
Fig 4a shows that each marker 41 can carry more than one epitope specific detection
moiety 42, e.g. monoclonal antibodies. This can lead to marker/detection moiety/analyte
complexes which carry more than one analyte 43.
Fig. 4b shows what can happen if a marker 44 carries more than one detection moiety,
wherein each moiety 45, 46, 47 binds to a different epitope of the analyte, e.g. polyclonal
antibodies. This can lead to the formation of large complexes which, later on, precipitate,
as symbolized by the dotted arrow. Therefore, it is preferred, in the present invention,
to use epitope specific detection moieties, like monoclonal antibodies.
Fig. 5 shows a dose response curve for NT-pro BNP using a sheep polyclonal NT-pro
BNP antibody directed to epitope 1-21 of NT-pro BNP as capture moiety. The latter
are, according to the definition of the present invention, not specific for the same
epitope, as they bind to different subregions of the same epitope of the given target.
Measurement took place with the Frustrated Internal Total Reflection technique See
experimental description for further details. As can be seen, speed and sensitivity
of the approach are exceptional. Fractional nanogram concentrations of NT-pro BNP
can be detected after an incubation protocol of 4 minute pulsed magnetic actuation
and 10 s magnetic marker removal.
DETAILED DESCRIPTION OF EMBODIMENTS
[0116] While the invention has been illustrated and described in detail in the drawings
and foregoing description, such illustration and description are to be considered
illustrative or exemplary.
[0117] Other variations to the disclosed embodiments can be understood and effected by those
skilled in the art in practicing the claimed invention, from a study of the drawings,
the disclosure, and the appended claims. In the claims, the word "comprising" does
not exclude other elements or steps, and the indefinite article "a" or "an" does not
exclude a plurality. The mere fact that certain measures are recited in mutually different
dependent claims does not indicate that a combination of these measures cannot be
used to advantage. Any reference signs in the claims should not be construed as limiting
the scope.
EXAMPLES
Example 1
Detection of NT-proBNP using a magnetic label
1. Materials
[0118]
- polyclonal NT-proBNP antibody directed to epitope 1-21 of NT-proBNP
- NT-pro BNP standards (Hytest 8NT1)
- 500 nm magnetic particles coated with 15C4 Hytest MAb antibody
2. Method
[0119] Polyclonal NT-pro BNP sheep antibody directed to epitope 1-21 was a polyclonal antibody
that has been inkjet printed on to surface of a polymer biochip at a concentration
of 150 ug/mL antibody in PBS. Iron oxide particles having a diameter of 500 nm covered
with a particle coating from Ademtech SA functionalized with a solution of 40 ug 15C4
Hytest MAb antibody/mg magnetic particle were diluted in assay buffer. NT-pro BNP
standards (Hytest 8NT1) were diluted in assay buffer. The magnetic label and NT-pro
BNP solutions were diluted 1:1 and 1 µL was exposed to the sensor surface. Mesurement
took place with the Frustrated Internal Total Reflection technique.
[0120] Magnetic nanoparticles at the sensor surface were detected with an evanescent field
created by a collimated beam of LED light with a wavelength of 625 nm at an incident
angle of 70° with respect to the normal, i.e. at an angle of 20° with respect to the
sensor surface. The reflected light passed through an imaging lens (f =7.5 mm, Anteryon)
onto a CCD camera (Marlin F080B/C, Allied Vision Technologies). The signal due to
the binding of nanoparticles to the sensor surface was calculated for each spot, averaging
over an area of 20 pixels x 20 pixels. The signal was determined by relating the reflected
light intensity to the measured light intensity prior to the binding of nanoparticles.
[0121] An actuation protocol consisting of 4 minute pulsed actuation and 10 s label removal
with a top coil was used. The solution was incubated for 30 s prior to insertion into
the cartridge to allow particles to bind cTnI molecules. After insertion of approximately
10 µL of fluid into the cartridge, the particles were attracted towards the sensor
surface for 225 s while the field was alternatingly switched (3·10
4 A/m). This results in the binding of particles containing NT pro BNP to the surface
containing anti-NT pro BNP antibodies. In the final step, the lower magnet was turned
off and the upper magnet was powered (2·10
4 A/m) to pull the unbound particles away from the sensor surface. The total assay
time was approximately 5 minutes Results are shown in Fig. 5.