Technical Field
[0001] This invention relates to automated and semi-automated electrophysiology analysis
and in particular relates to high-throughput automated electrophysiology. For this
a separating device for receiving media, an apparatus having a separation cup and
a separation method are provided.
Background
[0002] The electrical behavior of cells and cell membranes is of profound importance in
basic research as well as in modem drug development. A specific area of interest in
this field is in the study of ion channels and transporters. Ion channels are protein-based
pores found in the cell membrane that are responsible for maintaining the electrochemical
gradients between the extracellular environment and the cell cytoplasm. Ion channels
are passive elements in that, once opened, ions flow in the direction of existing
electrochemical gradients.
[0003] The study of ion channels is a very diverse and prolific area encompassing basic
academic research as well as biotechnical and pharmaceutical research. Electrophysiology
is performed on isolated cell membranes or vesicles as well as on synthetic membranes
where solubilized channels are reconstituted into a manufactured membrane. Instrumentation
for automated, high-throughput studies of ion channels have been developed and may
be referred to as high-throughput electrophysiological measurement systems.
[0004] Generally, many types of assays require adequate cell preparation. Thus, an ongoing
need exists for effective methods for cell preparation and apparatuses or devices
configured to implement such methods. Adequate cell preparation is of particular interest
in the context of automated assays, which may entail performing multiple assays with
minimal human intervention to increase throughput and hence the number of data points
acquired per day. While known automated high-throughput measurement systems such as
noted above may be employed to perform electrophysiological assays in a relatively
quick and efficient manner, such systems may not be equipped to automatically prepare
the cells and cell solutions used in the assays.
[0005] It is an object of the invention to provide a device, an apparatus and a method convenient
for automatically prepare the cells and cell solutions used in electrophysiology assays.
Summary
[0006] The invention is defined in claims 1, 7 and 9, respectively. Particular embodiments
are set out in the dependent claims.
[0007] A device for separating materials of different densities is provided. A cup body
has an internal cavity configured to hold media. An inner wall defines a central body
region having an upper and lower end. The upper end is wider than the lower end. An
interior shoulder circumscribes the upper end of the central body region. The interior
shoulder defines a neck region above the central body region and a shoulder trap below
the neck region. The shoulder trap circumscribes the upper end of the central body
region and is wider than the neck region. When the device is spun about a central
axis, the media travels upward along the inner wall toward the shoulder trap. Relatively
more dense material in the media is collected in the shoulder trap, and relatively
less dense material is expelled from the device through an opening above the neck
region.
[0008] According to an embodiment the separation device is designed according to the particulars
for the separation cup specified in the apparatus claims or as specified in the detailed
description. Features disclosed therein can be combined individually or in any arbitrary
combination.
[0009] A method for preparing a cell suspension from a starting mixture that includes relatively
less dense buffer solution and relatively more dense cells is also provided. The starting
mixture is dispensed into a device having a cup body with an internal cavity to hold
the starting mixture. The device is spun about a central axis such that the starting
mixture is driven upward along the inner wall of the cup body toward a shoulder trap
that circumscribes the internal cavity. The relatively more dense cells in the starting
mixture are collected in the shoulder trap, and at least some of the relatively less
dense buffer solution in the starting mixture is expelled from the device through
an opening of the cup body.
[0010] According to a preferred embodiment of the method, spinning comprises flowing at
least some of the starting mixture through one or more passages in the cup body such
that relatively more dense material is deposited in the shoulder trap when exiting
the one or more passages. Preferably the passages are designed as specified in the
apparatus claims or as specified in the detailed description.
[0011] An apparatus for separating materials of different densities is further provided.
A separation cup has an internal cavity configured to hold media. The separation cup
includes a shoulder trap that circumscribes the internal cavity. The shoulder trap
is configured such that, when the separation cup is spun about a central axis, relatively
more dense material in the media is collected in the shoulder trap, and relatively
less dense material in the media is expelled from the separation cup. A rotary actuator
is coupled to the separation cup and is configured to spin the separation cup about
a central axis of the separation cup.
[0012] Preferably the separation cup of the apparatus is designed according to the above
device for separating set out in the claims or is designed according to features specified
in the detailed description - the features combined individually or in any arbitrary
combination.
Brief Description of the Drawings
[0013] The invention may be better understood by referring to the following figures. The
components in the figures are not necessarily to scale, emphasis instead being placed
upon illustrating the principles of the invention. In the figures, like reference
numerals designate corresponding parts throughout different views.
- FIG. 1
- is a top view of an example of an implementation of an automated high-throughput electrophysiology
measurement system.
- FIG. 2
- is a side view of an example of an implementation of a robotic pipettor head of an
automated high-throughput electrophysiology measurement system.
- FIG. 3
- is a side cross-sectional view of an example implementation of a patch plate supported
on a plenum of an automated high-throughput electrophysiology measurement system.
- FIG. 4A
- is an exploded view of an example of an implementation of an apparatus for separating
materials of different densities.
- FIG. 4B
- is a front top-right perspective view of the automated apparatus for separating materials
of different densities of FIG. 4A shown in an assembled configuration.
- FIG. 5
- is a top perspective view of an example of an implementation of a separation cup.
- FIG. 6
- is a side cross-sectional view of the separation cup of FIG. 5.
- FIG. 7
- is a top perspective view of an example of an implementation of a cup housing.
- FIG. 8
- is a side cross-sectional view of the cup housing of FIG. 7.
- FIG. 9
- is a side cross-sectional view of an upper portion of the automated apparatus for
separating materials of different densities of FIG. 4A shown in an assembled configuration.
- FIG. 10
- is a perspective view of an example of an implementation of a cup mounting assembly.
- FIG. 11
- is a side cross-sectional view of a lower portion of the automated apparatus for separating
materials of different densities of FIG. 4A shown in an assembled configuration.
- FIG. 12
- is a top perspective view of an example of an alternative implementation of a separation
cup.
- FIG. 13
- is a flowchart of example method steps for automatically separating materials of different
densities.
- FIG. 14
- is a flowchart of example method steps for automatically agitating a separation cup
of an automated apparatus for separating materials of different densities.
Detailed Description
[0014] Apparatuses, devices, systems and methods for separating materials of different densities
are shown and described. The apparatus may, for example, be utilized for the automated
preparation of cells used in biological assays such as electrophysiological assays
performed by an automated, high-throughput electrophysiology measurement system. Preparing
cells for biological assays may include, for example, ensuring that the cells are
suspended in a desired buffer solution, at a desired concentration, and at a desired
level of homogeneity. It will be understood, however, that the apparatus may be employed
for separating materials of different densities in contexts beyond cell preparation
for biological assays.
[0015] As disclosed herein, an apparatus (or device, or system) for separating materials
of different densities may include a separation cup configured for holding flowable
media, which may include materials of different respective densities. The separation
cup may include one or more internal features that separate materials of different
densities held within the separation cup. Methods for preparing cell solutions are
also disclosed, including methods for suspending cells in a desired buffer solution
at a desired concentration and at a desired level of homogeneity. In some implementations,
the apparatus for separating materials may be utilized in performing one or more of
the methods. For example, cells may be prepared by controlling one or more operating
parameters of the apparatus such as, for example, the acceleration and deceleration
rates of the separation cup, the rotational speed of the separation cup, the spin
direction of the separation cup, and the duration of the spin. The apparatus may be
provided at the process deck of an automated high-throughput electrophysiology measurement
system thereby enabling on-deck automated preparation of cell concentrations. These
and other aspects relating to the cell preparation apparatus and methods will be discussed
in further detail below.
[0016] Referring to FIG. 1, an example of an implementation of an automated high-throughput
electrophysio logical measurement system 100 is shown in a top view. The system 100,
in this example, is configured to conduct simultaneous measurements on multiple samples
(e.g., a two-dimensional grid or array of samples). The high-throughput electrophysio
logical measurement system 100 may include a measurement platform 102, which may also
be referred to as a process deck 102. The process deck 102 may support the various
components of the system 100 and may comprise a generally planar surface for supporting
or maintaining a desired spatial arrangement of some or all of the components of the
measurement system 100.
[0017] The system may include a control module 104 that controls operation of the system
100 during an assay. The control module 104 may include, for example, an external
microcomputer, display device, and software user interface. The control module 104
may also include a microcontroller interfaced to the external microcomputer for controlling
the real-time functional aspects of the system 100 including motion control, fluidics
control, and electrical data recording.
[0018] The system 100 may also include a patch engine that controls the components of the
system 100, performs electrophysiological measurements, and digitizes the data acquired
during patch clamp assays. The patch engine, in this example, includes a plenum 106,
electrode plate 108, and data acquisition engine. These components will be discussed
in further detail below.
[0019] The system 100 may include multiple stations or modules configured for implementing
various functions. In the illustrated example, the system 100 includes seven stations:
a tip rack station 110; an external buffer station 112; a first compound station 114;
an analysis station 116; a wash station 118; a second compound station 120; and a
cell station 122. It will be understood that the system 100 may include more or less
stations, including stations providing functions different from those just noted.
[0020] Each of the stations, in this example, is shaped to receive an SBS-standard 384-well
microtitre plate (Society for Biomolecular Sciences). In other words, the stations,
in this example, may be described as having an SBS-standard 384-well microplate footprint.
Assay steps take place at the process deck 102, and a robotic pipettor head delivers
fluids from the external buffer station 112, cell station 122, and compound stations
114 and 120 to a measurement substrate at the analysis station 116. The robotic pipettor
head will be discussed further below with reference to FIG. 2.
[0021] The measurement substrate may be referred to as the patch plate and may include multiple
holes or apertures around which corresponding samples (e.g., cells or cell membranes)
may be positioned or sealed for analysis. The patch plate, in this example, is an
SBS-standard 384-well microplate. Accordingly, the patch plate, in this example, includes
384 individual wells for holding cells, external buffer solution, and biological screening
compounds. The 384 wells of the patch plate, in this example, may be arranged in a
grid of 16 rows (identified as A-P) and 24 columns (identified as 1-24). The wells
of the patch plate may include one or more apertures formed through the lower surface.
Each aperture may have a diameter of, for example, about 2 micrometers (µm). A patch
plate having one aperture per well may be referred to as a single-hole plate. A patch
plate having multiple apertures per well (e.g., an array of 64 apertures) may be referred
to as a population patch clamp (PPC) plate. The patch plate may be moved to and from
the analysis station during an assay. The patch plate will be discussed further below
with reference to FIG. 3.
[0022] The tip rack station 110 holds a tray that may be preloaded with pipettor tips. The
robotic pipettor head may lower onto the tip rack station 110 to load the pipettor
tips at the start of an assay. The pipettor tips may be utilized to aspirate and dispense
external buffer solution, compounds, and cells at appropriate times during a given
assay, depending on the particular method specified for the assay.
[0023] The external buffer station 112 may also be referred to as an input station and may
include an external buffer boat that holds external buffer solution. In some example
implementations, a peristaltic pump and vacuum-assisted waste bottle may be selectively
employed to automatically fill and drain the external buffer station 112. The external
buffer boat may be filled with external buffer solution prior to the start of an assay.
The external buffer solution may be a physiological saline solution comprising a salt
or mixture of salts that mimics extracellular solution (e.g., a solution containing
low concentrations of potassium). The robotic pipettor head may aspirate the external
buffer solution from the external buffer station 112, transport the external buffer
solution to the analysis station 116, and dispense the buffer solution into the wells
of the patch plate.
[0024] The first and second compound stations 114 and 120 may also be referred to as input
stations and hold biological screening compounds or other types of reagents that may
be utilized during the assay. An SBS-standard 384-well compound plate (e.g., a microplate)
may hold the biological screening compounds and reside within the footprint at the
first or second compound station 114 or 120. The robotic pipettor head may similarly
aspirate the compounds from the compound stations 114 and 120, transport the compounds
to the analysis station 116, and dispense the compounds into the wells of the patch
plate.
[0025] The analysis station 116 includes the plenum 106 of the patch engine and supports
the patch plate during the assay. The plenum 106 includes a reservoir 126, and an
internal buffer solution may be pumped into and out of the plenum reservoir 126 from
below during an assay. The internal buffer solution may be a saline solution comprising
a salt or mixture of salts that mimics the internal cytoplasm of a living cell (e.g.,
a solution containing high concentrations of potassium). The patch plate rests on
the plenum 106, and an o-ring 128 surrounding the perimeter of the plenum 106 creates
an air-tight seal between the patch plate and the plenum reservoir 126. A small negative
(differential) pressure is introduced that pulls cells (or cell membranes) residing
in the wells toward the aperture at the bottom of the well. The differential pressure
thus forms a high-resistance electrical seal between the cell (or cell membrane) and
the bottom of the well, as appreciated by persons skilled in the art.
[0026] The electrode plate 108 may be referred to as an electronics head and used to perform
electrophysiological measurements on cell samples at the patch plate. Electrophysiological
measurements may be performed by forming an electrical circuit across the apertures
in the wells of the patch plate. An electrical circuit may be formed by positioning
electrodes on opposite sides of the membrane of the patch plate. For example, a sense
electrode may be positioned above the membrane, and a ground electrode may be positioned
below the membrane. Accordingly, the plenum 106, in this example, includes four ground
electrodes 130 positioned at the top of the plenum reservoir 126, and the electrode
plate 108, in this example, may include an array of sense electrodes 132 housed in
a frame that fits on top of the patch plate and plenum. The electrode plate 108 will
be discussed in further detail below with reference to FIG. 2 and FIG. 3.
[0027] The arrangement of the sense electrodes 132 of the electrode plate 108 may correspond
to the arrangement of the wells of the patch plate such that each sense electrode
132 may perform an electrophysiological measurement at a respective well of the patch
plate. Accordingly, the electrode plate 108, in this example, may include an array
of 384 sense electrodes 132. Each sense electrode 132 may correspond to an electronic
channel. Accordingly, the 384 sense electrodes 132 in this example correspond to 384
electronic channels.
[0028] The electrodes 132 may be, for example, silver or silver-coated pins (i.e., Ag/AgCl).
To complete the circuit, a suitable electrolyte (e.g., saline) solution may be added
to the wells of the patch plate and the plenum reservoir 126. For example, the external
buffer solution and the internal buffer solution may contain chloride ions to enable
the sense electrodes 132 and ground electrodes 130 to monitor electrical activity.
[0029] The electrode plate 108 may be clamped to the plenum 106 during an assay such that
the sense electrodes 132 are received into respective wells of the patch plate. The
electrode plate 108 may include apertures formed through its upper surface to provide
access to the pipettor tips. In this way, the electrode plate 108 allows for the addition
of compounds to the patch plate wells while simultaneously measuring ion current in
the wells. As discussed further below with reference to FIG. 3, the sense electrodes
132 and the ground electrodes 130 may be coupled to measurement electronics to obtain
data relating to the electrophysiological measurements.
[0030] The wash station 118 may receive various components in order to clean those components
following an assay. The wash station 118, in this example, includes a reservoir that
accommodates the pipettor tips and the electrode pins of the electrode plates for
the washing procedures. Accordingly, the wash station 118, in this example, may include
a manifold of input ports that match the dimensionality of the pipettor tips and electrode
pins. A fluid handling system (not shown) may pump cleaning solution through the wash
station 118, which may then empty into waste carboys (not shown) below the process
deck 102. The wash station 118 may also serve as a resting position for the electrode
plate when not in use. The robotic pipettor head may pick up the electrode plate 108
at the wash station 118 and transport the electrode plate 108 to the analysis station
116 during an assay. The robotic pipettor head may then return the electrode plate
108 to its resting position at the wash station 118 at the conclusion of an assay.
[0031] The cell station 122 may also be referred to as an input station and include a cell
boat that holds the cells (or other biological samples) used in an assay. The cells
may be suspended in an external buffer solution while residing in the cell boat. The
robotic pipettor head may similarly aspirate the cells from the cell station 122,
transport the cells to the analysis station 116, and dispense the cells into the wells
of the patch plate.
[0032] Referring now to FIG. 2, an example of an implementation of a robotic pipettor head
150 for a high-throughput electrophysiology measurement system 100 is shown in a side
view. The robotic pipettor head 150 may also be referred to as a fluidics head or
a multi-channel dispensing head. The robotic pipettor head 150 may be used to add,
remove, replace, or transfer fluids, cell solutions, and compounds into the wells
of a patch plate. The robotic pipettor head 150, in this example, may hold the pipettor
tips utilized to transport fluids from the cell station 122, the external buffer station
112, and the compound stations 114 and 120 to the analysis station 116. The pipettor
tips aspirate or dispense the fluids in precise amounts according to the assay protocols.
[0033] The robotic pipettor head 150 may be coupled to a three-dimensional mechanical gantry
system 152 for moving the robotic pipettor head 150 between the stations of the process
deck. The control module 104 may communicate with the mechanical gantry system 152
to control the movement of the robotic pipettor head 150 during an assay.
[0034] At the start of an assay, the robotic pipettor head 150 may move to the tip rack
station 110 and load the pipettor tips. The robotic pipettor head 150 may also serve
as the transport mechanism for the electrode plate 108. Accordingly, the robotic pipettor
head 150 may, for example, include electrode plate transport clips 154 that hold the
electrode plate 108. The robotic pipettor head 150 may load the electrode plate 108
from its resting position at the wash station 118 and transport it to the analysis
station 116 where it clamps to the plenum 106 during the assay. At the conclusion
of the assay, the robotic pipettor head 150 may load the electrode plate 108 from
the analysis station 116 and transport it back to the wash station 118.
[0035] Referring now to FIG. 3, an example implementation of a patch plate 160 supported
by a plenum 106 of a high-throughput electrophysiology measurement system 100 is shown.
The patch plate 160 may include multiple wells 162 as discussed above (e.g., 384 wells).
Two wells 162 of the patch plate 160 are shown by way of example in FIG. 3. Each well
162 is partitioned by a well wall 164 and bounded by the bottom 166 of the patch plate
160. Additionally, the wells 162 in the example patch plate 160 of FIG. 3 each include
an aperture 168 formed through the bottom 166 of the patch plate 160. Cells 170 in
the respective wells 162 may be sealed to the bottom 166 of the patch plate 160 via
differential pressure as discussed above.
[0036] The wells 162 of the patch plate 160 may be filled with external buffer solution
172, and the plenum reservoir 126 of the plenum 106 situated beneath the patch plate
160 may be filled with internal buffer solution 174. Sense electrodes 132 may be positioned
in the respective wells 162 of the patch plate 160 to measure the electrical activity
occurring in the wells 162 during the assay, such as the activity of ion channels
176 of the cells 170 as appreciated by persons skilled in the art. The ground electrodes
130 of the plenum 106 may complete the electrical circuits across the respective apertures
168 of the patch plate 160.
[0037] The sense electrodes 132 of the electrode plate 108 and the ground electrodes 130
may communicate with the data acquisition engine 178 via measurement electronics 180
such as, for example, a programmable voltage source (not shown), an amplifier 182
and analog-to-digital converter (ADC) 184. As seen in the example shown in FIG. 3,
the sense electrodes 132 and the ground electrodes 130 are in signal communication
with the amplifier 182, which is in signal communication with the ADC 184, which is
in turn in signal communication with the data acquisition engine 178. The amplifier
182 may be a high-gain, low-noise trans-impedance amplifier that converts the current
measured on the sense electrode 132 to an analog voltage signal. The ADC 184 may convert
the analog voltage signal from the amplifier 182 into a digital voltage measurement.
The data acquisition engine 178 may thus save the digital voltage measurements for
the sense electrode channels in a computer memory.
[0038] Referring now to FIG. 4A, an exploded view of an example of an implementation of
an apparatus 200 for separating materials of different densities is shown. A mounting
frame 202 supports a separation cup 204 and a rotary actuator 206. The rotary actuator
206 drives rotation of the separation cup 204 about a central axis to separate materials
of different densities. The mounting frame 202 may be, for example, part of a process
deck 102 of an automated high-throughput electrophysiology measurement system 100
such as illustrated in FIGS. 1 and 2. As discussed further below, the separation cup
204 includes internal features that trap relatively high-density material while allowing
relatively low-density material to exit the cup 204 through an opening 208 at the
top of the cup 204.
[0039] The rotary actuator 206 includes a motor 210 and is mounted to the underside of the
mounting frame 202 by an actuator housing 212. The separation cup 204 is received
and positioned in a cup housing 214. The cup housing 214 is mounted to the top side
of the mounting frame 202 and may be secured to a pair of support frames 216 that
also mount to the top side of the mounting frame 202.
[0040] As discussed further below, the separation cup 204 is coupled to the rotary actuator
206 through an opening 218 formed through the mounting frame 202 via a cup mounting
assembly 220 and a rotor assembly 222. The cup mounting assembly 220, in this example,
includes a cup mount 224, a support pad 226, a biasing spring 228, and a rotary actuator
mount 230. The rotor assembly 222, in this example, includes a pair of ball bearings
232 that facilitate the rotation of the cup mounting assembly 220. The rotor assembly
222 may also include one or more washers 234, which may be used to selectively adapt
different types of motors to the actuator housing 212.
[0041] As seen in FIG. 4A, the cup housing 214, in this example, includes a drainage tube
236 that may fluidly communicate with a drainage nozzle 238 through a drain opening
240 formed through the mounting frame 202. The drainage nozzle 238 may be connected
to a plumbing system (not shown) in order to transport away the relatively low-density
material spun out of the separation cup 204. As also seen in FIG. 4A, a housing cap
242 may cover the top side of the cup housing 214 in order to enclose the separation
cup 204 when the separation cup 204 is situated in the cup housing 214. An opening
244 is formed through the housing cap 242, in this example, to permit a pipettor to
access the interior of the cup housing 214. The opening 244 in the housing cap 242,
in this example, is positioned above the separation cup 204 so that the pipettor may
aspirate material from or dispense material into the separation cup 204.
[0042] FIG. 4B is a front top-right perspective view of the apparatus 200 for separating
materials of different densities of FIG. 4A shown in an assembled view. As seen in
FIG. 4B, the separation cup 204 is situated in the cup housing 214, which is mounted
to the mounting frame 202. The separation cup 204 is coupled to the rotary actuator
206 through the opening 218 formed through the mounting frame 202. Accordingly, the
rotary actuator 206 may drive rotation of the separation cup 204 to expel relatively
low-density material out of the separation cup 204. As discussed further below, the
relatively low-density material spun out of the separation cup 204 may drain into
the drainage tube 236 and be transported away by a plumbing system (not shown) via
the drainage nozzle 238.
[0043] The motor 210 may be a brushless direct current (DC) motor coupled to a corresponding
encoder 246. The motor 210 may rotate the mounting assembly 220 and the separation
cup 204 secured in the mounting assembly 220 about a central axis. The motor 210 of
the rotary actuator 206 may communicate with a controller (e.g., a servo drive controller)
that controls operation of the motor 210 to rotate the mounting assembly 220 and separation
cup 204. The controller, in this example, may be in signal communication with and
driven by the control module 104 discussed above with reference to FIG. 1. In this
way, the control module 104 may control one or more operating parameters such as rotational
acceleration and deceleration, rotational speed, and the duration of rotation of the
separation cup 204. The control module 104, in this example, may be the control module
discussed above with reference to FIG. 1.
[0044] Referring now to FIGS. 5 and 6, a top perspective view and side cross-sectional view
of an example of an implementation of a separation cup 300 are respectively shown.
The separation cup 300 includes an internal cavity 302 formed in a body 304 (FIG.
6) of the separation cup 300. The internal cavity 302 of the separation cup body 304
may hold flowable media such as a solution, suspension, slurry, emulsion, etc. The
internal cavity 302 may, for example, hold a starting mixture having the relatively
more and relatively less dense materials to be separated. The starting mixture may
be, for example, a cell suspension that includes cells suspended in media (e.g., serum,
buffer, antibiotics, etc.). Accordingly, an inner wall 306 of the separation cup 300
that at least in part defines the internal cavity 302 may further define various regions
of the separation cup 300 including a central body region 308, a neck region 310,
and a bottom region 312 as shown by way of example in FIG. 5. The neck region 310
of the separation cup 300, in this example, is situated above the central body region
308, and the bottom region 312 of the separation cup, in this example, is situated
below the central body region 308.
[0045] The contour of the inner wall 306 facilitates movement of the cell suspension upward
along the inner wall 306. In this regard, the internal cavity 302 may have a substantially
conical shape as shown by way of example in FIG. 5. In particular, the central body
region 308 of the separation cup 300, in this example, may have a substantially frustoconical
shape, and the bottom region 312 of the separation cup 300, in this example, may have
a substantially hemispherical shape. Accordingly, the upper end 314 of the central
body region 308 may be wider than the lower end 316 of the central body region 308,
and the diameter, D, of the internal cavity 302 may taper through the central body
region 308 downward towards the lower end 316 of the central body region 308. That
is, the diameter, D, at the central body region 308 reduces in the direction toward
the lower end 316.
[0046] The separation cup 300, in this example, also includes a shoulder 318 circumscribing
the upper end 314 of the central body region 308. As seen in FIG. 5, the shoulder
318, in this example, defines the neck region 310 above the central body region 308
and a shoulder trap 320 below the neck region 310. The shoulder trap 320 also circumscribes
the upper end 314 of the central body region 308 of the separation cup 300. Accordingly,
the shoulder 318 and shoulder trap 320 may each be described as having an annular
shape. As seen in FIG. 5, the shoulder trap 320 is wider than the neck region 310.
In this way, the shoulder trap 320 of the separation cup 300 collects (i.e., traps,
localizes, etc.) the relatively more dense materials when the separation cup 300 is
spun about a central axis. As the separation cup 300 is spun about a central axis,
the cell suspension travels upward along the inner wall 306 toward the shoulder trap
320. The shoulder trap 320 collects the relatively more dense material in the cell
suspension while the relatively less dense material in the cell suspension continues
to travel upward through the neck region 310 and is expelled from the separation cup
300 through an opening 322 above the neck region 310. The separation cup 300 may also
include an opening portion 324 above the neck region 310 that circumscribes the neck
region 310. The opening portion 324 may have an outwardly-flared shape, which also
facilitates movement of the relatively less dense material up along the inner wall
306 and out from the top as the separation cup 300 spins about a central axis.
[0047] The separation cup 300, in this example, also includes a rim 326 surrounding the
opening portion 324 of the cup 300, and a base 328 at the bottom of the cup 300. As
seen in FIG. 5, an annular notch 330 may be formed in the underside of the rim 326
such that the notch 330 separates the outer wall 332 of the separation cup body 304
from an inward-facing surface 334 of the rim wall 336. The base 328 of the separation
cup 300 may include one or more coupling members configured for coupling the separation
cup 300 to, and thus being driven by, a rotary actuator such that the separation cup
300 rotates about its central axis. In the illustrated example, the base 328 includes
multiple feet 337, which may be used when securing the separation cup 300 within the
mounting assembly (220 in FIG. 4A) as discussed further below.
[0048] Referring particularly to FIG. 6, as mentioned above the internal cavity 302, in
this example, includes from top to bottom a neck region 310, a shoulder trap 320,
a central body region 308, and a bottom region 312. In this example, the neck region
310 may be described as having a frustoconical shape, the shoulder trap 320 may be
described as having an annular shape, the central body region 308 may also be described
as having a frustoconical shape, and the bottom region 312 may be described as having
a hemispherical shape. Accordingly, from top to bottom, the inner diameter, D, of
the internal cavity 302, in this example, may reduce through the neck region 310,
increase through the shoulder trap 320, and reduce through the central body region
308 and the bottom region 312. In this way, the neck region 310, the central body
region 308, and the bottom region 312, in this example, may be described as tapering
in a downward direction. The shoulder trap 320, in this example, may thus be described
as flaring laterally toward the outer wall 332 of the cup body 304. As seen in FIG.
6, the contour of the inner wall 306 may follow a somewhat S-shaped curve through
the shoulder trap 320.
[0049] As the separation cup 300 is spun about a central axis, centrifugal forces act on
the cell suspension held in the cup 300. As the separation cup 300 spins, the centrifugal
forces draw the cell suspension toward the tapered inner wall 306. Due to the conical
shape of the internal cavity 302, the cell suspension travels up the inner wall 306
toward the annular shoulder trap 320. When the cell suspension reaches the shoulder
trap 320, the relatively more dense material in the cell suspension collects in the
shoulder trap 320. The relatively less dense material in the cell suspension continues
traveling upward past the shoulder trap 320, along the neck region 310, and along
the outwardly flared opening portion 324 to exit the separation cup 300.
[0050] Also seen in FIG. 6, the rim 326 of the separation cup 300, in this example, is an
annular rim 326 that folds back on itself forming an annular notch 330 between the
inward-facing surface 334 rim wall 336 of the rim 326 and the outer wall 332 of the
body 304 of the separation cup 300. As shown by way of example in FIG. 6, the rim
wall 336 of the rim 326 is substantially parallel with the outer wall 332 of the separation
cup body 304 with the notch 330 positioned between the rim wall 336 and the outer
wall 332.
[0051] The separation cup 300 may have a height of around, for example, 100 millimeters
(mm), and an outer diameter of around, for example, 70 mm. The internal cavity 302
may have a depth of around, for example, 70 mm, and the inner diameter, D, of the
conical internal cavity 302 may taper between, for example, around 35 mm near the
upper end 314 of the central body region 308 to around 10 mm near the lower end 316
of the central body region 308.
[0052] With reference to FIG. 7, a top perspective view of an example of an implementation
of a separation cup housing 400 is shown. The separation cup housing 400 may include
multiple mounting flanges 402 around the base 404 used to mount the separation cup
housing 404 to the mounting frame (202 in FIG. 4A). As discussed above, the separation
cup (204 in FIG. 4A) resides within the separation cup housing 400. Accordingly, the
cup housing 400 in this example includes a central duct 406 defined by a vertical
duct wall 408 and leads to a lower internal chamber 410. The duct wall 408, in this
example, has a cylindrical shape.
[0053] The separation cup 204 may be inserted through the central duct 406 such that the
lower portion of the separation cup 204 (e.g., the base 328 in FIG. 6) resides in
the lower internal chamber 410 of the cup housing 400. The underside of the separation
cup housing 400, in this example, is open such that the cup mounting assembly (220
in FIG. 4A) may be received and situated in the lower internal chamber 410. The cup
housing 400 also includes an annular collection chamber 412 surrounding the central
duct 406 and the separation cup 204.
[0054] The collection chamber 412 receives the relatively low-density material spun out
of the separation cup 204 when the cup 204 is spun in the central duct 406 about a
central axis. The floor 414 of the collection chamber 412 is slanted toward an upper
drainage opening 416 formed in the floor 414 of the collection chamber 412. A drainage
tube 418connects the upper drainage opening 416 to a lower drainage opening 420 down
at the base 404 of the cup housing 400. The lower draining opening 420 may be positioned
over a drain opening (240 in FIG. 4A) in the mounting frame 202 that receives a drainage
nozzle (238 in FIG. 4A) as mentioned above. In this way, the cup housing 400 facilitates
removal of the low-density material spun out of the separation cup 204.
[0055] In FIG. 8, a side cross-sectional view of the cup housing 400 of FIG. 7. As seen
in FIG. 8, the cup housing 400 includes an annular collection chamber 412 formed between
the duct wall 408 of the central duct 406 and the outer wall 422 of the cup housing
400. The central duct 406 leads to a lower internal chamber 410 that houses the cup
mounting assembly 220 as discussed further below. The floor 414 of the collection
chamber 412 slants towards an upper draining opening 416 and drainage tube 418.
[0056] Referring now to FIG. 9, a side cross-sectional view of an upper portion of the apparatus
200 for separating materials of different densities of FIG. 4A is shown in an assembled
configuration. As seen in FIG. 9, the separation cup 300 resides within the central
duct 406 of the cup housing 400. The duct wall 408 of the central duct 406 separates
the separation cup 300 from the collection chamber 412 of the cup housing 400. The
separation cup 300 passes through the central duct 406 of the cup housing 400 such
that the lower portion of the separation cup 300 resides in the lower internal chamber
410 of the cup housing 400 with the cup mounting assembly 220. The lower internal
chamber 410 of the cup housing 400 will be discussed in further detail below with
reference to FIG. 11.
[0057] Additionally, the top of the duct wall 408 is received in the notch 330 of the rim
326 surrounding the top of the separation cup 300 such that the rim wall 334 of the
rim 326 and the duct wall 408 of the central duct 406 overlap as shown by way of example
in FIG. 9. In this way, the notch 330 prevents fluid expelled from the separation
cup 300 from contacting the outer wall 332 of the separation cup 300. Moreover, the
housing cap 242 may cover the top of the cup housing 400 in order to enclose the separation
cup 300 residing within the housing 400. The pipettor opening 244 of the housing cap
242 is positioned over the opening 208 of the separation cup 204. In this way, a pipettor
may be inserted through the opening 244 of the housing cap 242 in order to aspirate
media from and dispense media into the separation cup 300. As seen in FIG. 9, this
configuration enables a pipettor to aspirate and dispense media even when the separation
cup 300 is spinning.
[0058] The configuration of the separation cup 300 and cup housing 400 shown by way of example
in FIG. 9 facilitates the separation of relatively high-density and low-density materials
using centrifugal forces. As explained above, the separation cup 300 may be spun about
a central axis as the cup 300 resides in the cup housing 400. Relatively high-density
material is trapped in the shoulder trap 320 of the internal cavity 302, and relatively
low-density material exits through the outwardly flared opening portion 324 of the
cup 300. The annular collection chamber 412 of the cup housing 400 surrounding the
separation cup 300 thus receives the relatively low-density material spun out of the
separation cup 300.
[0059] Referring now to FIG. 10, a perspective view of an example of an implementation of
a cup mounting assembly 500 is shown. The cup mounting assembly 500, in this example,
includes a rotor mount 502, biasing spring 504, support pad 506, and cup mount 508.
In this example, the biasing spring 504 and support pad 506 are received in the rotor
mount 502, and the cup mount 508 is secured to the rotor mount 502 (e.g., via screws
or other attachment means). In FIG. 10, the top side of the rotor mount 502 is shown,
and the respective undersides of the support pad 506 and the cup mount 508 are shown.
[0060] The rotor mount 502, in this example, includes a recess 510 that receives the biasing
spring 504 and support pad 506 as well as a central duct 512 for receipt of a shaft
514 on the support pad 506. The biasing spring 504, in this example, is positioned
to surround the walls 516 of the central duct 512 of the rotor mount 502. The biasing
spring 504, in this example, is also positioned to surround the shaft 514 of the support
pad 506. The support pad 506 also includes a recess 518 formed on its underside for
receipt of the biasing spring 504. In this configuration, the biasing spring 504 biases
the support pad 506 away from the rotor mount 502. When the biasing spring 504 is
loaded, the central duct 512 of the rotor mount 502 receives the shaft 514 of the
support pad 506. The rotor mount 502 is coupled to the rotor assembly (222 in FIG.
4A) to receive the rotational force provided by the rotary actuator (206 in FIG. 4A).
[0061] The separation cup mount 508, in this example, secures the separation cup (300 in
FIG. 5) when the separation cup 300 is situated in the cup housing (400 in FIG. 7).
As seen in FIG. 10, the separation cup mount 508 includes a set of internal flanges
520 that define an opening 522 for the base (328 in FIG. 5) of the separation cup
300 formed through the cup mount 508. The base opening 522 defined by the internal
flanges 520 has a shape that matches the base 328 of the separation cup 300. Accordingly,
the base opening 522 of the cup mount 508 includes respective openings 524 to receive
the feet (337 in FIG. 5) on the base 328 of the separation cup 300. The cup mount
508, in this example, also includes a recess 526 for the base 328 of the separation
cup 300 formed on the underside of the internal flanges 520. The shape of the base
recess 526 on the underside of the internal flanges 520, in this example, also matches
the shape the base 328 of the separation cup 300. Accordingly, each internal flange
520, in this example, respectively includes a recess 528 to receive one of the feet
337 on the base 328 of the separation cup 300.
[0062] The shape of the base recess 526 on the underside of the cup mount 508, however,
is rotated relative to the shape of the base opening 522 of the cup mount 508. Accordingly,
the base 328 of the separation cup 300 may be inserted through the opening 522 of
the cup mount 508 and rotated such that the feet 337 on the base 328 of the separation
cup 300 line up with and are received into the foot recesses 528 formed on the underside
of the internal flanges 520. The recesses 528 formed on the underside of the internal
flanges 520 may thus secure and lock the feet 337 on the base 328 of the separation
cup 300. In this way, the cup mount 508 may apply the rotational force provided by
the rotary actuator 206 to the separation cup 300 in order to spin the cup 300 about
a central axis.
[0063] The rotor mount 502 may also include respective recesses 530 for receipt of the feet
337 on the base 328 of the separation cup 300. As seen in FIG. 10, the foot recesses
530 at the rotor mount 502 are sized and shaped to permit the feet 337 on the base
328 of the to rotate clockwise and counterclockwise in order to respectively line
up with the foot openings 524 or the foot recesses 528 of the cup mount 508. In this
way, the separation cup 300 may be rotated in one direction to secure the cup 300
to the cup mount 508 by lining up the feet 337 on the base 328 of the cup 300 with
the foot recesses 528 formed on the underside of the internal flanges 520. Likewise,
the separation cup 300 may be rotated in the opposite direction to remove the cup
300 from the cup mount 508 by lining up the feet 337 on the base 328 of the cup 300
with the foot openings 524 defined by the internal flanges 520. The rotary actuator
(206 in FIG. 4A) may include a brake to prevent rotation of the rotary actuator when
securing or removing the separation cup 300 in the cup mounting assembly 500.
[0064] Referring to FIG. 11, a side cross-sectional view of a lower portion of the apparatus
200 for separating materials of different densities of FIG. 4A is shown in an assembled
configuration. As seen in FIG. 11, the lower portion of the separation cup 300 and
the cup mounting assembly 500 reside in the lower internal chamber 410 of the separation
cup housing 400.
[0065] When a separation cup 300 is inserted into the separation housing 400, the cup 300
passes through the central duct 406 until the base 328 of the cup 300 engages the
cup mounting assembly 500. The separation cup 300 may be rotated until the feet 337
on the base 328 of the cup 300 line up with the foot openings (524 in FIG. 10) of
the cup mount 508. With the feet 337 on the base 328 of the separation cup 300 lined
up with the foot openings 524 at the cup mount 508, the cup 300 may be pushed downward
through the opening (522 in FIG. 10) of the cup mount 508. As the separation cup 300
is pushed through the opening 522 of the cup mount 508, the base 328 of the cup 300
engages the support pad 506 and loads the biasing spring 504. The feet 337 on the
base 328 of the separation cup 300 are also received into the foot recesses 530 of
the rotor mount 502 as the cup 300 is pushed through the opening 522 of the cup mount
508.
[0066] Once the feet 337 on the base 328 of the separation cup 300 pass through the opening
522 of the cup mount 508, the cup 300 may be rotated in the foot recesses 530 of the
rotor mount 502 such that the feet 337 on the base 328 of the cup 300 line up with
the foot recesses 528 formed on the underside of the internal flanges 520 of the cup
mount 508. The separation cup 300 may then be released such that the biasing spring
504 unloads and pushes the separation cup 300 upward and into the recess (526 in FIG.
10) formed on the underside of the internal flanges 520 cup mount 508. The foot recesses
528 formed on the underside of the internal flanges 520 receive the feet 337 on the
base 328 of the separation cup 300. The biasing spring 504 continues to bias the support
pad 506 against the base 328 of the separation cup 300, which secures the cup 300
in the recess 526 formed on the underside of the internal flanges 520 of the cup mount
508. Secured in the recess 526, the cup mount 508 may apply the rotational force provided
by the rotary actuator (206 in FIG. 4A) to the separation cup 300 as mentioned above.
[0067] The separation cup 300 may be removed from the cup mounting assembly 500 by reversing
the procedure: pushing down on the separation cup 300 such that the foot recesses
530 of the rotor mount 502 receive the feet 337 on the base 328 of the cup 300; rotating
the cup 300 until the feet 337 on the base 328 of the cup 300 line up with the foot
openings 524 of the cup mount 508, and lifting the cup 300 through the opening 522
of the cup mount 508 out of the cup mounting assembly 500.
[0068] Referring now to FIG. 12, an example of an alternative implementation of a separation
cup 600 is shown. The alternative implementation of the separation cup 600 includes
one or more passages 602 formed through the body 304 of the cup 600 that define flow
paths from the lower end 316 of the central body region 308 to the upper end 314 of
the central body region 308 near the annular shoulder trap 320. The passages 602 each
include a longitudinal bore 604 formed through the body 304 of the separation cup
600 that connects a lower aperture 606 formed in the inner wall 306 near the lower
end 316 of the central body region 308 to an upper aperture 608 formed in the inner
wall 306 near the upper end 314 of the central body region 308 below the shoulder
trap 320.
[0069] As the separation cup 600 spins, centrifugal forces drive the cell suspension towards
lower apertures 606 formed in the inner wall 306 near the lower end 316 of the central
body region 308. The centrifugal forces drive the cell suspension through the lower
apertures 606 and into the bores 604 of the passages 602. The centrifugal forces then
drive the cell suspension upwards through the bores 604 of the passages 602 and out
of the upper apertures 608 below the shoulder trap 320. As the cell suspension exits
the upper apertures 608, the relatively more dense material is deposited in the shoulder
trap 320 while the relatively less dense material continues past the shoulder trap
320 and out of the cup 600 as described above.
[0070] As mentioned above, the cell suspension may include cells-the relatively more dense
material-suspended in a media such as a buffer solution-the relatively less dense
material. The passages 602 of the separation cup 600, in this alternative example,
advantageously help to ensure that the cells remain immersed in the buffer solution
as the cells travel upward through the passages 602 toward the shoulder trap 320.
[0071] The alternative implementation of the separation cup 600 shown by way of example
in FIG. 12 includes six passages 602 from the lower end 316 to the upper end 314of
the central body region 308. The passages 602, in this example, each include a longitudinal
bore 604 that connects a lower aperture 606 formed in the inner wall 306 to an upper
aperture 608 formed in the inner wall 306. Also seen in FIG. 12, the passages 602,
in this example, may be angled relative to the body 304 of the separation cup 600.
[0072] Additionally, the passages 602 may include different regions that define the respective
flow paths. As shown by way of example in FIG. 12, a passage 602 may include a lower
elbow-shaped region 610 connected to the lower aperture 606; the lower elbow-shaped
region 610 leads to a slanted middle region 612; the slanted middle region 612 leads
to an upper elbow-shaped region 614; the upper elbow-shaped region 614 leads to a
vertical top region 616; and the vertical top region 616 is connected to the upper
aperture 608.
[0073] The upper apertures 608 and lower apertures 606 may, for example, have a circular
or an oval shape. Accordingly, a cross-section of a bore 604 of a passage 602 may
also have a circular or oval shape. The width of the apertures 606 and 608 may be
around, for example, 1 mm, and the width of the bores 604 of the passages 602 may
also be around, for example, 1 mm. The passages 602 may have a length, for example,
of around 40 mm.
[0074] A method for separating materials of different densities using the separation cup
described above has also been developed. The method may be employed to prepare cells
for use in a biological assay such as those carried out by automated high-throughput
electrophysiology measurement systems. As evident from the present disclosure, the
method may be automated and thus conducive for implementation with a suitable automated
system such as the system 100 described above and illustrated by example in FIGS.
1 and 2.
[0075] Referring to FIG. 13, a flowchart 700 of example method steps for separating materials
of different densities is shown. In this example, the method is described in the context
of preparing cells for a biological assay. It will be understood however, that the
method may be employed in other contexts to separate other types of materials of different
densities.
[0076] First, a pipettor may aspirate cell solution from a cell holding station and dispense
the cell solution into the separation cup (step 702). For example, around 15 milliliters
(ml) to around 30 ml of cell solution may be dispensed into the separation cup. The
pipettor may dispense the cell solution into the separation cup at rate of, for example,
around 100 microliters (µl) per second (s).
[0077] The separation cup may then be rotated about a central axis in order to remove the
relatively low-density materials from the cup as described above (step 704). The separation
cup, in this example, may be rotated at a spin speed of around 3000 rotations per
minute (rpm) in order to remove the relatively low-density materials.
[0078] After the relatively low-density materials have been removed from the separation
cup, the pipettor may then dispense a desired solution (e.g., wash buffer) into the
cup (step 706). For example, around 20 ml to around 30 ml of desired solution may
be dispensed into the separation cup. Like before, the pipettor may dispense the desired
solution into the separation cup at a rate of around 100 µl/s. The pipettor may deliver
the desired solution to the separation cup while the cup is still spinning.
[0079] Having delivered the desired solution to the separation cup, the cup may be agitated
to remove the relatively high-density materials from the shoulder trap and place the
relatively high-density materials in the desired solution (step 708). In this way,
the method ensures that substantially all of the relatively high-density materials
are in the desired solution.
[0080] Agitating the separation cup to mix the desired solution and the cells may involve
controlling the rotational duration, direction, speed, acceleration, and deceleration.
As mentioned above, the control module may control the rotary actuator when the actuator
drives the rotation of the separation cup. Referring to FIG. 14, a flowchart 800 of
example method steps for automatically agitating the separation cup is shown. It will
be understood that any combination or subset of the agitation steps discussed below
may be selectively performed to agitate the separation cup. First, the separation
cup may be accelerated forward (e.g., clockwise) at a predetermined forward acceleration
rate (step 802), and a predetermined forward spin speed may be maintained for a predetermined
duration (step 804). After maintaining the forward spin speed, the separation cup
may be decelerated at a predetermined forward deceleration rate (step 806). The predetermined
forward acceleration rate may be, for example, 1000 rotations per minute (rpm) per
second (s)-rpm/s; the predetermined forward spin speed may be, for example, 3000 rpm;
the predetermined duration may be, for example, 100 s; and the predetermined forward
deceleration rate may be, for example, 1000 rpm/s.
[0081] The separation cup may then be accelerated backward (e.g., counterclockwise) at a
predetermined backward acceleration rate (step 808), and a predetermined backward
spin speed may be maintained for a predetermined duration (step 810). After maintaining
the backward spin speed, the separation cup may be decelerated at a predetermined
backward deceleration rate (step 812). The predetermined backward acceleration rate
may be, for example, 1000 rpm/s; the predetermined backward spin speed may be, for
example, 3000 rpm; the predetermined duration may be, for example, 100 s; and the
predetermined backward deceleration rate may be, for example, 1000 rpm/s.
[0082] After spinning the separation cup forwards and backwards as described above, the
pipettor may be used to triturate or titrate the cell solution (step 814) and thereby
achieve the desired level of homogeneity. Triturating or titrating the cell solution
may include aspirating the cell solution from the separation cup with a pipettor and
dispensing the cell solution back into the separation cup. The pipettor may aspirate
and dispense the solution a predetermined number of times (e.g., ten times) when triturating
or titrating the cell solution. If more uniform homogeneity is desired, then additional
trituration or titrating steps may be performed.
[0083] In general, terms such as "communicate" and "in ... communication with" (for example,
a first component "communicates with" or "is in communication with" a second component)
are used herein to indicate a structural, functional, mechanical, electrical, signal,
optical, magnetic, electromagnetic, ionic or fluidic relationship between two or more
components or elements. As such, the fact that one component is said to communicate
with a second component is not intended to exclude the possibility that additional
components may be present between, and/or operatively associated or engaged with,
the first and second components.
[0084] The foregoing description of implementations has been presented for purposes of illustration
and description. It is not exhaustive and does not limit the claimed inventions to
the precise form disclosed. Modifications and variations are possible in light of
the above description or may be acquired from practicing the invention. The claims
and their equivalents define the scope of the invention.
1. A device (300) for separating materials of different densities, the device comprising:
a cup body (304) having an internal cavity (302) configured to hold media;
an inner wall (306) defining a central body region (308) having an upper end and a
lower end wherein the upper end is wider than the lower end;
an interior shoulder (318) circumscribing the upper end of the central body region
(308) wherein the interior shoulder defines a neck region (310) above the central
body region and a shoulder trap (320) below the neck region wherein the shoulder trap
circumscribes the upper end of the central body region; and
wherein the shoulder trap (320) is wider than the neck region (310) such that, when
the device is spun about a central axis, the media travels upward along the inner
wall (306) toward the shoulder trap (320), relatively more dense material in the media
is collected in the shoulder trap, and relatively less dense material in the media
is expelled from the device through an opening (322) above the neck region.
2. The device of claim 1, wherein the internal cavity (302) at the central body region
(308) has a substantially conical shape such that a diameter of the internal cavity
(302) at the central body region tapers downward toward the lower end of the central
body region.
3. The device of claim 1 or 2, comprising a coupling member (328) configured for coupling
the device to a rotary actuator (206) wherein the cup body (304) is rotatable about
a central axis of the cup body.
4. The device of claim 1, 2 or 3, wherein the inner wall (306) defines a bottom region
below the central body region (308), and the bottom region has a substantially hemispherical
shape.
5. The device of any of the previous claims, further comprising an opening portion (324)
above the neck region (310) that defines a or the opening (322) through which the
relatively less dense material is expelled wherein the opening portion circumscribes
the neck region and flares outward away from the neck region.
6. The device of any of the previous claims, further comprising one or more passages
(602) formed through the cup body (304) from the lower end of the central body region
(308) to the upper end of the central body region, wherein the one or more passages
each define a flow path from the lower end to the upper end of the central body region,
wherein in particular the one or more passages (602) each include a longitudinal bore
(604) formed through the cup body (304) that connects a lower aperture formed in the
inner wall (306) near the lower end of the central body region (308) to an upper aperture
formed in the inner wall near the upper end of the central body region below the shoulder
trap (320).
7. A method for preparing a cell suspension from a starting mixture, the starting mixture
including relatively less dense buffer solution and relatively more dense cells, the
method comprising:
dispensing the starting mixture into a device (204, 300, 600) having a cup body (304)
with an internal cavity (302) to hold the starting mixture, in particular into a device
according to any of the previous claims;
spinning the device about a central axis such that the starting mixture is driven
upward along an inner wall (306) of the cup body (304) toward a shoulder trap (320)
that circumscribes the internal cavity such that the relatively more dense cells in
the starting mixture are collected in the shoulder trap and at least some of the relatively
less dense buffer solution in the starting mixture is expelled from the device through
an opening (322) of the cup body;
dispensing a desired solution into the internal cavity (302) of the cup body (304)
after expelling at least some of the relatively less dense buffer solution; and
agitating the device such that the desired solution and the relatively more dense
cells are mixed together.
8. The method of claim 7, wherein agitating the device (300) includes at least one of:
accelerating the device forward at a predetermined forward acceleration rate;
maintaining a predetermined forward spin speed for a first predetermined amount of
time;
decelerating the device at a predetermined forward deceleration rate;
accelerating the device backward at a predetermined backward acceleration rate;
maintaining a predetermined backward spin speed for a second predetermined amount
of time;
decelerating the device at a predetermined backward deceleration rate; and
titrating or triturating the desired solution and the relatively more dense cells
with a pipettor.
9. An apparatus (200) for separating materials of different densities, the apparatus
comprising:
a separation cup (204, 300), in particular a separating device according to any of
claims 1 to 6, having an internal cavity (302) configured to hold media and comprising
a shoulder trap (320) circumscribing the internal cavity, wherein the shoulder trap
is configured such that when the separation cup is spun about a central axis, relatively
more dense material in the media is collected in the shoulder trap (320), and relatively
less dense material in the media is expelled from the separation cup (204, 300); and
a rotary actuator (206) coupled to the separation cup and configured to spin the separation
cup about a central axis of the separation cup.
10. The apparatus of claim 9, wherein the separation cup (204, 300) further includes:
an inner wall (306) defining a central body region (308) having an upper end and a
lower end wherein the upper end is wider than the lower end; and
an interior shoulder (318) circumscribing the upper end of the central body region
(308) wherein the interior shoulder defines the shoulder trap (320) circumscribing
the internal cavity (302) and a neck region (310) above the central body region, wherein
in particular the internal cavity (302) at the central body region (308) of the separation
cup has a substantially conical shape such that a diameter of the internal cavity
at the central body region tapers downward toward the lower end of the central body
region.
11. The apparatus of claim 9 or 10, wherein:
the diameter of the internal cavity (302) of the separation cup (204, 300) increases
in a downward direction through the shoulder trap (320), and the diameter of the internal
cavity of the separation cup reduces in a downward direction through the neck region
(310); and/or
the separation cup (204, 300) further includes an opening portion (324) above the
neck region (310) and circumscribing the neck region, and the opening portion (324)
flares outward away from the neck region.
12. The apparatus of claim 9, 10 or 11, wherein:
the separation cup (204, 300, 600) further includes one or more passages (602) formed
through the separation cup from the lower end of the central body region (308) to
the upper end of the central body region; and
the one or more passages (602) each define a flow path from the lower end to the upper
end of the central body region of the separation cup.
13. The apparatus of claim 12, wherein the one or more passages (602) of the separation
cup (204, 300, 600) each include a longitudinal bore (604) that connects a lower aperture
(606) formed in the inner wall (306) near the lower end of the central body region
(308) to an upper aperture (608) formed in the inner wall near the upper end of the
central body region below the shoulder trap (320).
14. The apparatus according to any of claims 9 to 13, further comprising a housing (400)
that surrounds the separation cup (204, 300, 600), wherein the housing includes a
collection chamber (412) that circumscribes the or an opening portion (324) of the
separation cup such that the collection chamber receives the relatively less dense
material expelled from the separation cup when the separation cup is spun about the
central axis, wherein in particular a floor (414) of the collection chamber (412)
slants towards a drain (416, 418) such that the relatively less dense material expelled
from the separation cup is drainable away from the collection chamber.
15. The apparatus according to any of claims 9 to 14, further comprising a mounting assembly
(220, 500) that couples the separation cup (204, 300, 600) to the rotary actuator
(206) wherein the separation cup is releasably securable within the mounting assembly.