TECHNICAL FIELD
[0001] The present invention relates to an antigen detection method using a lectin. More
particularly, the present invention relates to a high-sensitivity and low-noise antigen
detection method using a lectin, the method comprising the step of subjecting a sample
to an enzyme treatment.
BACKGROUND ART
[0002] In order to allow proteins assuming a principal role in the biological life functions
to orderly exert their functions in the cellular world, post-translation modifications
including glycosylation play an extremely important role. In recent years, it has
been gradually revealed that most in vivo proteins undergo modifications with sugar
chains and that those sugar chains attached to proteins play important roles in various
aspects of biological phenomena such as viral infection, protozoan parasitism and
infection, binding of toxins, binding of hormones, fertilization, development and
differentiation, protein stability, cancer cell metastasis, and apotosis.
[0003] It is known that even those proteins having an identical amino acid sequence (proteins
with the same name) are modified with a wide variety of sugar chains and the structures
of these sugar chains vary depending on the condition of the protein-producing cells.
[0004] The relationships between such changes in sugar chains and diseases have also been
gradually elucidated and the findings have been applied to, for example, such methods
of identifying hepatoma by fraction measurement of α-fetoprotein (AFP) sugar chains
as disclosed in Patent Document 1 and Non-patent Document 1, such methods of identifying
prostate adenocarcinoma by fraction measurement of prostate-specific antigen (PSA)
sugar chains as disclosed in Patent Document 2, and such methods of identifying adenocarcinoma
by fraction measurement of carcinoembryonic antigen (CEA) sugar chains as disclosed
in Non Patent Documents 2 and 3.
[0005] For specific detection of a sugar chain on a glycoprotein, proteins called lectins
that are capable of specifically recognizing, binding to and cross-linking a sugar
chain are widely utilized. This is because it is very difficult to prepare an antigen
against a sugar chain and such an antigen is hardly available.
[0006] Lectins are inexpensive and available in a large amount. In addition, lectins show
excellent protein stability and can thus be stored over a prolonged period. However,
lectins have such drawbacks of having lower binding activity and specificity than
antibodies.
[0007] For example, N-acetylgalactosamine is known as a main binding sugar chain in
Wisteria floribunda lectin (WFA) ; however, since N-acetylgalactosamine shows slight binding with galactose,
it may non-specifically react with a galactose residue if present in a reaction system.
[0008] As a method of simply and quantitatively analyzing a sugar chain on a specific protein
using a lectin having such a property, a sandwich assay using an antibody against
a protein and a lectin is exemplified.
[0009] However, although this technique is effective when the subject protein is purified
to a certain extent, since it shows markedly reduced performance in terms of sensitivity
and quantitative capacity in a system that contains a large amount of contaminants,
such as glycoproteins and glycolipids that are not measurement subjects and included
in blood, urine and the like to be used as a sample in ordinary disease diagnosis,
it is very difficult to perform an analysis using this technique. Accordingly, this
technique is utilized only in serum diagnosis and the like of limited items in which
the serum concentration of subject protein is extremely high (about several µg/mL).
[0010] As measures for reducing the effects of such contaminants, the use of a blocking
agent which inhibits adsorption of serum contaminants to the surface of an antibody-immobilized
support (Patent Document 3), the addition of an adsorbent which allows non-specific
substances to be adsorbed in advance (Patent Documents 4 and 5) and the use of a washing
solution capable of efficiently removing molecules adsorbing to a support (Patent
Document 3) have been examined.
[0011] Here, as blocking agents, for example, bovine serum albumin (BSA) and casein are
known, and synthetic macromolecular materials are also used in some cases. An absorbent
for non-specific substances is a molecular which is capable of binding with molecules
that inhibit antigen-antibody reaction and cause noise generation and removing such
molecules from a reaction system. As such an absorbent, macromolecules and sugar chain
complexes such as glycosaminoglycan and heparin may be used. As for a washing solution,
the composition thereof has been examined and there is also a report of a case where
the effects of salt strength and various surfactants are investigated (Patent Document
3).
[0012] However, it is an extremely rare case where these background-suppressing measures
show a drastic effect in quantitative analysis using a lectin for detection, and there
is also a problem that the search and examination of a subject-suitable blocking agent
require tremendous man-hours.
CITATION LIST
Patent Literature
Non Patent Literature
[0014]
[Non Patent Literature 1] Sugar Chains of Human Cord Serum α-Fetoprotein: Characteristics of N-linked Sugar
Chains of Glycoproteins Produced in Human Liver and Hepatocellular Carcinomas, K.
Yamashita et al., Cancer Res., 53, 1 (1993)
[Non Patent Literature 2] Carbohydrate Structures of Nonspecific Cross-reacting Antigen-2, a Glycoprotein Purified
from Meconium as an Antigen Cross-reacting with Anticarcinoembryonic Antigen Antibody,
K. Yamashita et al., Biol. Chem., 264, 17873 (1989)
[Non Patent Literature 3] Structural Studies of the Carbohydrate Moieties of Carcinoembryonic Antigens, K. Yamashita
et al., Cancer Res., 47, 3451 (1987)
SUMMARY OF INVENTION
Technical Problem
[0015] Objects of the present invention are: to provide an antigen detection method which
can improve the detection sensitivity and quantitative performance for a sugar chain
on an antigen to be detected with a lectin by a simple technique (simple constitution)
in an antigen detection system using a lectin; and to provide a detection kit.
Solution to Problem
[0016] The present inventors intensively studied to solve the above-described problems and
discovered that high background (noise) in a measurement system using a lectin is
attributed to that, since a lectin used for detection has a certain range in its sugar
chain recognition, the lectin may also bind to glycoproteins and glycolipids which
are not detection subjects and are generated in certain amounts even when a known
treatment method using a blocking agent or the like is performed, being non-specifically
bound to a support, an antigen-binding molecule (e.g., antibody) and the like. Based
on this new finding, the present inventors discovered that suppression of background
and increase in the sensitivity can be attained by cleaving at least one sugar chain
excluding the target sugar chain with hydrolase, thereby completing the present invention.
That is, in one aspect of the present invention, in order to realize at least one
of the above-described objects, the present invention includes the following matters.
- [1] A method of detecting an antigen having a specific sugar chain in a sample with
a lectin that binds to plural kinds of sugar chains including the specific sugar chain,
the method comprising: a first step of bringing the lectin into contact with the sample;
a second step of bringing a glycohydrolase capable of cleaving at least one kind of
sugar chain to which the lectin can bind into contact with the sample, the at least
one kind of sugar chain excluding the specific sugar chain among the plural kinds
of sugar chains; a fourth step of detecting the antigen bound with the lectin after
the first and second steps.
- [2] A kit for detecting an antigen having a specific sugar chain, the kit comprising:
a reagent which comprises a lectin that binds to plural kinds of sugar chains including
the specific sugar chain; a reagent which comprises a glycohydrolase capable of cleaving
at least one kind of sugar chain to which the lectin can bind, the at least one kind
of sugar chain excluding the specific sugar chain among the plural kinds of sugar
chains; and a reagent which comprises a molecule that binds to an antigen having the
specific sugar chain.
[0017] Fig. 1 provides conceptual diagrams showing one example of the means for solving
the problems according to the present invention. In Fig. 1, a lectin that binds to
plural kinds of sugar chains including a specific sugar chain recognizes both a specific
sugar chain (46c) and a sugar chain (46d) which excludes the specific sugar chain
and to which the lectin can bind. For example, in a case where WFA lectin is used
for a PSA antigen, the specific sugar chain (46c) corresponds to N-acetyl-D-galactosamine
(GalNAc) and the sugar chain (46d), which excludes the specific sugar chain and to
which the lectin can bind, corresponds to galactose (Gal).
Advantageous Effects of Invention
[0018] According to the present invention, an antigen detection method which can suppress
an increase in the background of a measurement system and improve the detection sensitivity
and quantitative performance for a sugar chain on an antigen to be detected with a
lectin by a simple technique (simple constitution) in an antigen detection system
using a lectin, as well as a detection kit can be provided.
[0019] Further, since the above-described effects can be attained only by incorporating
an enzyme into a reagent in a sandwich assay system, the antigen detection method
of the present invention is a simple technique (simple constitution) and can be effectively
applied to diagnosis scene.
BRIEF DESCRIPTION OF THE DRAWINGS
[0020]
[Fig. 1] Fig. 1 provides conceptual diagrams showing an example of the mechanism of
background generation in detection of an antigen with a lectin (Fig. 1a) and an example
of the means for suppressing background and increasing the sensitivity according to
the present invention (Fig. 1b).
[Fig. 2] Fig. 2 is a conceptual diagram showing one embodiment of the method according
to the present invention, wherein a hydrolase and a lectin are brought into contact
with a sample and the sample is then brought into contact with a support on which
an antibody is solid-phased.
[Fig. 3] Fig. 3 is a conceptual diagram showing one embodiment of the method according
to the present invention, wherein a hydrolase is brought into contact with a sample
and the sample is subsequently brought into contact with a support on which an antibody
is solid-phased and then with a lectin.
[Fig. 4] Fig. 4 is a conceptual diagram showing one embodiment of the method according
to the present invention, wherein, after bringing a sample into contact with a support
on which an antibody is solid-phased, a hydrolase and then a lectin are brought into
contact with the sample.
[Fig. 5] Fig. 5 is a drawing which schematically shows the outline of a quantitative
measurement apparatus for illustrating the method of quantitatively measuring a specific
analyte according to the present invention.
[Fig. 6] Fig. 6 is a partially enlarged view of the quantitative measurement apparatus
shown in Fig. 5.
[Fig. 7] Fig. 7 is an enlarged drawing which schematically shows a sensor section
38 after transfer of an antigen to be detected (analyte) 46.
[Fig. 8] Fig. 8 is an enlarged drawing which schematically shows the sensor section
38 after transfer of a fluorescently-labeled lectin 48.
DESCRIPTION OF EMBODIMENTS
[0021] The detection method and detection kit according to the present invention will now
be described.
[0022] It is noted here that the term "lectin" used herein refers to a protein which specifically
recognizes a specific sugar chain and binds thereto. The term "antigen" used herein
means a molecule which comprises a sugar chain recognized by a lectin and can thus
be recognized by and bound with the lectin, and this term encompasses proteins (sugar
chain proteins), lipids (sugar chain lipids) and the like. The term "detection method"
used herein naturally encompasses not only qualitative measurement methods but also
quantitative measurement methods (quantitative methods).
«Lectin, Hydrolase etc., Used in the Present Invention»
[0023] In the method of the present invention, a lectin, a label, a hydrolase, an antigen-binding
molecule and a sample containing an antigen to be detected (analyte) are used. In
addition, a support for immobilization of the antigen-binding molecule may also be
used. These elements will now each be described in detail.
<Lectin>
[0024] As the lectin used in the method of the present invention, a lectin that binds to
plural kinds of sugar chains including a specific sugar chain of the antigen to be
detected is employed.
[0025] Examples of the above-described lectin include lectins belonging to various molecule
families obtained from, for example, animals, plants, fungi, bacteria and viruses,
that is, ricin B chain-related "R-type lectins" that are found throughout the biological
world including bacteria; calcium-requiring "C-type lectins" including many representative
lectins such as "calnexin/calreticulin" that is generally present in eukaryotes and
participates in folding of glycoproteins, and "selectin" and "collectin" that are
widely present in multicellular animals; "galectin" that is widely distributed in
the animal kingdom and shows specificity to galactose; "leguminous lectins" that form
a large family in Leguminosae plants, and "L-type lectins" that have structural similarity
thereto and are involved in intracellular transport in animals; mannose 6-phosphate-binding
"P-type lectins" that are involved in intracellular transport of lysosomal enzymes;
"annexin" binding to an acidic sugar chain such as glycosaminoglycan; and "I-type
lectins" that belong to an immunoglobulin superfamily and include "siglecs".
[0026] Examples of other lectins include ACA
(Amaranthus caudatus lectin), BPL
(Bauhinia purpurea lectin), ConA
(Canavalia ensiformis lectin), DBA (Horsegram lectin), DSA
(Datura stramonium lectin), ECA
(Erythrina cristagalli lectin), EEL (Spindle Tree lectin), GNA
(Galanthus nivalis lectin), GSL I
(Griffonia simplicifolia lectin), GSL II
(Griffonia simplicifolia lectin), HHL
(Hippeastrum hybrid lectin), jacalin
(Artocarpus integrifolia lectin), LBA (Lima bean lectin), LCA
(Lens culinaris lectin), LEL
(Lycopersicon esculentum lectin), LTL
(Lotus tetragonolobus lectin), MPA (
Maclura pomifera lectin), NPA (
Narcissus pseudonarcissus lectin), PHA-E (
Phaseolus Vulgaris lectin), PHA-L (
Phaseolus Vulgaris lectin), PNA (
Arachis hypogaea lectin), PSA (
Pisum sativum lectin), PTL-I (
Psophocarpus tetragonolobus lectin), PTL-II (
Psophocarpus tetragonolobus lectin), PWM (pokeweed lectin), RCA120 (
Ricinus communis lectin), SBA (soybean lectin), SJA (
Sophora japonica lectin), SNA (
Sambucus nigra lectin), SSA (
Sambucus sieboldiana lectin), STL (
Solanum tuberosum lectin), TJA-I (
Trichosanthes japonica lectin), TJA-II
(Trichosanthes japonica lectin), UDA (Common Stinging Nettle lectin), UEA I
(Ulex europaeus lectin), VFA (
Vicia faba lectin), VVA
(Vicia villosa lectin), WFA (
Wisteria floribunda lectin) and WGA (wheat germ lectin).
<Label>
[0027] In the method of the present invention, a label is used for detection of the above-described
lectin bound to an antigen having a specific sugar chain. The label is bound to the
lectin and used as a labeled lectin.
[0028] As the label, a label known to those of ordinary skill in the art, such as a fluorescent
dye, an enzyme, a coenzyme, a chemiluminescent substance or a radioactive substance,
can be employed.
[0029] Examples of the fluorescent dye include organic fluorescent dyes such as fluorescent
dyes of fluorescein family (manufactured by Integrated DNA Technologies, Inc.), fluorescent
dyes of polyhalofluorescein family (manufactured by Applied Biosystems Japan, Ltd.),
fluorescent dyes of hexachlorofluorescein family (manufactured by Applied Biosystems
Japan, Ltd.), fluorescent dyes of coumarin family (manufactured by Invitrogen Corp.),
fluorescent dyes of rhodamine family (manufactured by GE Healthcare Bio-Sciences Corp.),
fluorescent dyes of cyanine family, fluorescent dyes of indodicarbocyanine family,
fluorescent dyes of oxazine family, fluorescent dyes of thiazine family, fluorescent
dyes of squaraine family, fluorescent dyes of chelated lanthanide family, fluorescent
dyes of BODIPY (registered trademark) family (manufactured by Invitrogen Corp.), fluorescent
dyes of naphthalene sulfonate family, fluorescent dyes of pyrene family, fluorescent
dyes of triphenylmethane family, and Alexa Fluor (registered trademark) dye series
(manufactured by Invitrogen Corp.).
[0030] Further, examples of the fluorescent dyes also include fluorescent proteins that
are represented by rare earth (e.g., Eu, Tb) complex-based fluorescent dyes (such
as ATBTA-Eu
3+), blue fluorescent proteins (BFP), cyan fluorescent proteins (CFP), green fluorescent
proteins (GFP), yellow fluorescent proteins (YFP), red fluorescent proteins (DsRed)
and allophycocyanin (APC; LyoFlogen (registered trademark)), and fluorescent particles
of latex, silica and the like.
[0031] When a sample derived from a blood specimen is analyzed, in order to minimize the
effect of light absorption by iron originating from hemocytes in the blood, it is
desired to use a fluorescent dye having a maximum fluorescence wavelength in the near-infrared
region, such as Cy5 or Alexa Fluor 647.
[0032] Examples of the radioactive substance include radio isotopes (such as
32P,
14C,
125I,
3H and
131I).
<Hydrolase>
[0033] As the hydrolase used in the method of the present invention, a glycohydrolase that
is capable of cleaving at least one kind of sugar chain to which the above-described
lectin can bind, the at least one kind of sugar chain excluding the above-described
specific sugar chain among the plural kinds of sugar chains, is employed. The hydrolase
is not particularly restricted as long as it has the above-described enzyme activity,
and preferred examples thereof include glycohydrolases that are classified as E.C.3.2.1
in the enzyme classification of the International Enzyme Committee, more specifically
galactosidase, mannosidase and fucosidase.
[Galactosidase]
[0034] As galactosidase that can be used in the present invention, there is no particular
restriction as long as it is capable of cleaving the β1-4 and/or β1-3 bond(s) of galactose.
Some of the glycoproteins and glycolipids contained in serum have a galactose residue
at a non-reducing terminal. For example, when detecting β-N-acetylgalactosamine residue
with a lectin such as TJA-II, WFA or SBA, such glycoproteins and glycolipids generate
noise and cause a reduction in the sensitivity; however, the detection sensitivity
of N-acetylgalactosamine in serum is improved by cleaving the β1-4 and/or β1-3 bond(s)
of galactose. Galactose has bonds such as α1-3, β1-3 and β1-4; however, the galactosidase
that can be used in the present invention may cleave only the β1-4 bond or some of
the bonds including β1-4.
[0035] Mammals also have galactosidase, and the studies of galactosidases derived from plants,
bacteria and protozoan pathogens are in progress. As galactosidase, those which are
derived from
Bacteroides fragilis, Xanthomonas manihotis and HCV are known. Thereamong, one example of galactosidase capable of cleaving the
β1-4 bond of galactose is galactosidase derived from
Bacteroides fragilis.
[Mannosidase]
[0036] As mannosidase that can be used in the present invention, there is no particular
restriction as long as it is capable of cleaving the α1-2, α1-3 and/or β1-6 bond(s)
of mannose. Mannosidase is present in mammals as well, and the studies of mannosidase
derived from plants, bacteria and yeast are in progress. As mannosidase, those which
are derived from
Canavalia ensiformis, Xanthomonas manihotis and African land snail (
Achatina fulica) are known.
[Fucosidase]
[0037] As fucosidase that can be used in the present invention, there is no particular restriction
as long as it is capable of cleaving the α1-6 bond of fucose. Fucosidase is widely
present in animals including mammals, plants, bacteria, yeast and the like and, for
example, fucosidases derived from almond, bovine kidney,
Elizabethkingia miricola and
Xanthomonas manihotis are known.
<Antigen-binding Molecule (Ligand)>
[0038] The antigen-binding molecule of the present invention (hereinafter, also referred
to as "ligand") is not particularly restricted as long as it specifically recognizes
and binds to an antigen to be detected (analyte) and does not prevent a lectin from
recognizing a sugar chain. For example, an antibody, an aptamer or a synthetic peptide
can be used. Thereamong, in the present invention, an antibody is preferably used.
[0039] In the present invention, the term "antibody" is used with a meaning that includes
not only a complete antibody but also an arbitrary antibody fragment or derivative,
encompassing complete antibodies as well as a variety of antibodies such as Fabs,
Fab'
2s, CDRs, humanized antibodies, polyfunctional antibodies and single-chain antibodies
(ScFv).
<Antigen to be Detected (Analyte)>
[0040] The antigen to be detected (hereinafter, also referred to as "analyte") may be any
molecule or molecular fragment as long as it has a specific sugar chain recognized
by a lectin and an antigen-binding molecule can specifically recognize and bind thereto.
[0041] Examples of such "molecule" or "molecular fragment" include nucleic acids (such as
single-stranded or double-stranded DNAs, RNAs, polynucleotides, oligonucleotides and
PNAs (peptide nucleic acids), as well as nucleosides, nucleotides and modified molecules
thereof; proteins (such as polypeptides and oligopeptides); amino acids (including
modified amino acids); saccharides (such as oligosaccharides, polysaccharides and
sugar chains); lipids; and modified molecules and complexes of these molecules. Thereamong,
as the analyte, proteins (glycoproteins) and lipids (glycolipids) are preferred and
proteins (glycoproteins) are more preferred.
[0042] Examples of the proteins include tumor antigens/tumor markers, signal transducers
and hormones. More specifically, preferred examples of the proteins include tumor
antigens/tumor markers such as PSAs, AFPs and CEAs.
<Sample Containing Antigen to be Detected (Analyte)>
[0043] The test sample used in the detection method of the present invention is a sample
containing the above-described antigen to be detected (analyte). In the analyte-containing
sample, in addition to a sample that actually contains the analyte, a sample that
potentially contains the analyte is also included. Examples of such analyte-containing
sample include biological samples and samples derived from living bodies that contain
the analyte; and biological samples and samples derived from living bodies that potentially
contain the analyte. Examples of such biological samples and samples derived from
living bodies include blood, serum, plasma, urine, spinal fluid, saliva, cells, tissues,
organs, and preparations thereof (such as biopsy specimens). The test sample used
in the detection method of the present invention is preferably blood, serum or plasma.
[0044] The above-described liquid samples such as blood, serum, plasma, urine, spinal fluid
and saliva can be diluted with an appropriate buffer prior to use. Further, the solid
samples such as cells, tissues and organs can be homogenized with an appropriate buffer
to about 2 to 10 times based on volume and the resulting suspension or supernatant
thereof can be used as is or after further dilution.
<Combination of Antigen to be Detected, Lectin and Hydrolase>
[0045] Table 1 shows specific examples of combinations of an antigen having a specific sugar
chain (antigen to be detected), a lectin that binds to plural kinds of sugar chains
including the specific sugar chain, and a glycohydrolase that is capable of cleaving
at least one kind of sugar chain to which the above-described lectin can bind, the
at least one kind of sugar chain excluding the above-described specific sugar chain
among the plural kinds of sugar chains.
[0046] In addition to those combinations shown in Table 1, taking into consideration the
antigen to be detected such as a tumor antigen or tumor marker, glycoproteins and
glycolipids other than the antigen to be detected that are likely to be contained
in a sample along with the antigen as well as the types of sugar chains contained
in the antigen, glycoproteins and glycolipids, a lectin which readily binds to a sugar
chain of the antigen and a glycohydrolase which cleaves a sugar chain(s) of glycoproteins
and glycolipids to which the lectin may also bind at the same time can be appropriately
selected and used in a combination.
[0047] It is noted here that, when an antibody is used as the antigen-binding molecule,
it is appropriate to use an antigen-specific antibody as the antibody. For example,
when human PSA is txhe antigen, an anti-human PSA antibody may be used.
[Table 1]
| Antigen |
Lectin |
Glycohydrolase |
| Prostate-specific antigen (PSA) |
Wisteria floribunda lectin (WFA) |
galactosidase |
| Prostate-specific antigen (PSA) |
Soybean lectin (SBA) |
galactosidase |
| Prostate-specific antigen (PSA) |
Trichosanthes japonica lectin (TJA-II) |
fucosidase |
| α-fetoprotein (AFP) |
Lens culinaris lectin (LCA) |
Mannosidase |
| Carcinoembryonic antigen (CEA) |
Tri chosan thes japonica lectin (TJA-I) |
galactosidase |
| α-fetoprotein (AFP) |
Aleuria aurantia lectin (AAL) |
fucosidase |
| CA125 antigen (CA125) |
Wheat germ lectin (WGA) |
N-acetylglucosaminidase |
| Thyroglobulin |
Canavalia ensiformis lectin (ConA) |
glucosidase |
<Support>
[0048] In the detection method of the present invention, a support can be used for immobilizing
an antigen-binding molecule thereon. Examples of the support include insoluble polysaccharides
such as agarose and cellulose; synthetic resins such as silicon resins, polystyrene
resins, polyacrylamide resins, nylon resins and polycarbonate resins; and insoluble
supports made of glass or the like. These supports are used in the form of, for example,
beads (mainly spherical) or a plate (mainly planar). As the beads, for example, magnetic
beads or resin beads that are filled in a column or the like can be used. In the case
of a plate, for example, a multi-well plate (such as a 96 multi-well plate) or a biosensor
chip can be used. Such support is also called "solid-phase material" and a planar
support such as a plate is referred to as "substrate".
[0049] The antigen-binding molecule and the support can be bound with each other by a commonly
used method such as chemical binding or physical adsorption. As the support, any commercially
available one can be suitably used.
[0050] Here, the binding of the antigen-binding molecule and the support is referred to
as "solid-phasing" and the support bound with the antigen-binding molecule is also
referred to as "solid-phased support".
«Detection Method of the Present Invention»
<Steps Included in Detection Method>
[0051] The detection method of the present invention is a method of detecting an antigen
having a specific sugar chain in a sample with a lectin that binds to plural kinds
of sugar chains including the specific sugar chain, and the detection method comprises
the following steps.
[0052]
(1) a first step of bringing the above-described lectin into contact with the sample
("the lectin-binding step");
(2) a second step of bringing a glycohydrolase capable of cleaving at least one kind
of sugar chain to which the lectin can bind into contact with the sample, the at least
one kind of sugar chain excluding the specific sugar chain among the plural kinds
of sugar chains ("the sugar chain-cleaving step"); and
(4) a fourth step of detecting the antigen bound with the lectin, which is carried
out after the first and second steps ("the detection step").
[0053] The detection method of the present invention may further comprise the following
step:
(3) a third step of bringing the sample into contact with a support on which a molecule
binding to the above-described antigen is immobilized, the third step being carried
out before the above-described fourth step ("the antigen-capturing step").
<Order of Carrying Out Steps (Step Order)>
[0054] In the method of the present invention, the above-described steps can be carried
out in any order as long as the detection step (the fourth step) is carried out at
the end. Further, the lectin-binding step (the first step) and the sugar chain-cleaving
step (the second step) can be carried out simultaneously as well. Specifically, preferred
examples of the order of carrying out the steps include the below-described orders.
It is noted here that the expression "the first step + the second step" indicates
that the first and second steps are carried out simultaneously and the symbol "→"
means that the step shown in the left of the symbol is carried out before the step
shown in the right. For instance, " (the first step + the second step) → the third
step → the fourth step" indicates that the first and second steps are carried out
simultaneously and the third step is then carried out, followed by the fourth step.
(Step Orders of the Present Invention)
[0055]
- (1) (the first step + the second step) → the fourth step
- (2) the first step → the second step → the fourth step
- (3) the second step → she first step → the fourth step
- (4) (the first step + the second step) → the third step → the fourth step
- (5) the first step → the second step → the third step → the fourth step
- (6) the second step → the first step → the third step → the fourth step
- (7) the first step → the third step → the second step → the fourth step
- (8) the second step → the third step → the first step → the fourth step
- (9) the third step → (the first step + the second step) → the fourth step
- (10) the third step → the first step → the second step → the fourth step
- (11) the third step → the second step → the first step → the fourth step
[0056] Figs. 2 to 4 are conceptual diagrams showing some of these step orders. Figs. 2 to
4 are conceptual diagrams corresponding to the above-described step orders of (4),
(8) and (11), respectively. In these figures, a lectin that binds to plural kinds
of sugar chains including a specific sugar chain recognizes both a specific sugar
chain (46c) and a sugar chain (46d) which excludes the specific sugar chain and to
which the lectin can bind. For example, in a case where WFA lectin is used for a PSA
antigen, the specific sugar chain (46c) corresponds to N-acetyl-D-galactosamine (GalNAc)
and the sugar chain (46d), which excludes the specific sugar chain and to which the
lectin can bind, corresponds to galactose (Gal).
[0057] One example of a method of carrying out the steps of the present invention without
the third step is a method in which an antibody labeled with a donor fluorophore of
FRET (Fluorescence Resonance Energy Transfer) reagent is used as an antigen-binding
molecule and an acceptor fluorophore of FRET reagent is used as a lectin-labeling
label. In this case, glycoproteins and glycolipids that are not the detection target
non-specifically bind to the antigen-binding molecule (antibody) to cause an increase
in background. Thus, the increased background can be reduced by the detection method
of the present invention which comprises the first, second and fourth steps, thereby
the effects of the present invention can be attained.
[0058] From the standpoint of increasing the detection sensitivity, it is preferred that
the method of the present invention include the third step (the antigen-capturing
step).
[0059] The orders of carrying out the second step (the sugar chain-cleaving step) in the
whole steps are largely classified into (A) cases where the second step is carried
out on a support after the third step (the antigen-capturing step) and (B) other cases
(where the sugar chain-cleaving step is carried out before the antigen-capturing step
or the antigen-capturing step is not carried out).
[0060] In the cases of (A), a sample is first brought into contact with a support on which
an antigen-binding molecule (such as an antibody) is solid-phased (immobilized). On
the support with which the sample is brought into contact, serum glycoproteins and
glycolipids are non-specifically adsorbed. By adding thereto an enzyme capable of
cleaving sugar chains other than a specific sugar chain, the sugar chains other than
the specific sugar chain can be cleaved and removed from the glycoproteins and glycolipids
that are non-specifically bound to the support and antigen-binding molecule. This
inhibits an increase in the background caused by an addition of a lectin.
[0061] In the cases of (B), with or without diluting a sample potentially containing an
analyte with an appropriate buffer, an enzyme capable of cleaving sugar chains other
than a specific sugar chain is added to the sample. By this, sugar chains that are
noise components can be removed from other proteins contained in the antigen-containing
sample and the specificity and sensitivity are improved.
[0062] As compared to the cases of (B) where the enzyme treatment is performed in a large
amount of contaminants, the cases of (A) where only those contaminants adsorbing to
the support and antigen-binding molecule are treated show superior noise-removing
effect and are thus more preferred.
[0063] Further, it is preferred that the second step (the sugar chain-cleaving step) be
carried out before the first step (the lectin-binding step). This is because, when
a lectin is bound and its sugar chain is then cleaved, the cleaving efficiency is
reduced due to steric hindrance and the like and the background is thus increased.
[0064] The method of the present invention can also be carried out in combination with a
conventional background suppression method and such combination is expected to provide
superior background-suppressing effect.
<Details of Each Step>
[0065] The steps will now each be described in detail.
[1. First Step (Lectin-binding Step)]
[0066] The first step is where a lectin that binds to plural kinds of sugar chains including
a specific sugar chain is allowed to bind to an antigen having the specific sugar
chain. The amount, concentration in a reaction solution, reaction time and reaction
conditions of the lectin used in this step may be adjusted as appropriate in accordance
with the type of the lectin.
[2. Second Step (Sugar Chain-cleaving Step)]
[0067] The second step is where a glycohydrolase capable of cleaving at least one kind of
sugar chain to which the above-described lectin can bind into contact with the sample,
the at least one kind of sugar chain excluding the above-described specific sugar
chain among the above-described plural kinds of sugar chains, so as to cleave the
at least one sugar chain excluding the specific sugar chain. The amount, concentration
in a reaction solution, reaction time and reaction conditions of the glycohydrolase
used in this step may be adjusted as appropriate in accordance with the type of the
glycohydrolase.
[0068] For example, in cases where galactosidase derived from
Bacteroides fragilis is used, the β1-4 bond of galactose in serum glycoproteins and glycolipids can be
cleaved using the galactosidase in an amount of 2 to 1,000 mU, preferably 20 to 100
mU.
[0069] The galactosidase treatment (reaction) time is normally 10 minutes to 24 hours, preferably
30 minutes to 1 hour. The reaction temperature is preferably 25°C to 40°C.
[0070] Further, for example, in cases where mannosidase derived from
Canavalia ensiformis is used, the bonds of mannose in serum glycoproteins and glycolipids can be cleaved
using the mannosidase in an amount of 2 to 1,000 mU, preferably 20 to 100 mU.
[0071] The mannosidase treatment (reaction) time is normally 10 minutes to 24 hours, preferably
30 minutes to 1 hour. The reaction temperature is preferably 25°C to 40°C.
[3. Third Step (Antigen-capturing Step)]
[0072] The third step is where the antigen having the specific sugar chain is allowed to
bind to an antigen-binding molecule immobilized on a support (such as a substrate).
The reaction conditions such as reaction time and reaction temperature may be adjusted
as appropriate in accordance with the antigen and antigen-binding molecule that are
used.
[4. Fourth Step (Detection Step)]
[0073] The fourth step is where the lectin is detected by measuring a label bound thereto
and an antigen to be detected, to which the lectin is bound, is further detected.
(Measuring Method)
[0074] The detection method used in the detection step of the present invention is not particularly
restricted as long as it is capable of measuring the above-described label, and the
detection can be performed by a method that is suitable for each labeling substance
and known to those of ordinary skill in the art. For example, in cases where a lectin
labeled with a radioactive substance is to be detected, the detection can be performed
by liquid scintillation or a RIA method. In cases where a lectin labeled with a fluorescent
dye is to be detected, the detection can be performed using a luminometer, a SPFS
measurement apparatus or the like. In cases where a lectin labeled with an enzyme
is to be detected, the detection can be performed by adding a substrate corresponding
to the labeling enzyme and then measuring a chemical change of the substrate caused
by the enzyme, such as color development, fluorescence or chemiluminescence.
[Surface Plasmon-field Enhanced Fluorescence Spectroscopy: SPFS) Method]
[0075] As a measuring method to be used in the detection method of the present invention,
SPFS is preferred. SPFS is a method which utilizes a phenomenon that an evanescent
wave transmitting through a metal thin film is enhanced by several tens to several
hundreds of times due to resonance with surface plasmon when the metal thin film formed
on a dielectric member is irradiated with an excitation light at an angle that causes
attenuated total reflection (ATR), thereby efficiently exciting a fluorescent material
labeling an analyte (analysis subject) captured in the vicinity of the metal thin
film so as to measure its fluorescence signal. Such SPFS is extremely sensitivity
as compared to ordinary fluorescent labeling methods and the like; therefore, it is
capable of quantifying an analyte even when the analyte is present in a sample only
in a trace amount.
<Measuring Member for SPFS>
[0076] A measuring member for SPFS generally has a constitution in which a sensor chip,
on which a place (measurement region) where a sandwich-type immunocomplex is formed
for fluorescence measurement by SPFS is provided, and a member for constructing a
flow path or well, which member is capable of retaining a variety of solutions used
in the formation of a sandwich-type immunocomplex and the like (e.g., analyte-containing
sample, labeling ligand solution and other reaction reagents) on the measurement region,
are laminated.
[0077] The sensor chip basically comprises: a transparent support for introducing an excitation
light to the backside of a metal thin film; a metal thin film for generating surface
plasmon resonance, which is formed on the transparent support; and a reaction layer
for capturing an analyte on the sensor surface, which is formed on the metal thin
film. As required, the sensor chip may further comprise a spacer layer for inhibiting
metal extinction of fluorescence caused by excessive proximity of fluorescent material
to the metal thin film, which spacer layer is formed between the metal thin film and
the reaction layer.
[0078] The part where the reaction layer is formed corresponds to the measurement region.
The measurement region may be provided by forming the reaction layer on the entire
bottom surface of a flow path or well or by forming the reaction layer only on a portion
of the bottom surface (with a desired pattern as required). The area of the measurement
region can be adjusted, taking into consideration the irradiation area of the excitation
light that is generally irradiated as a laser beam. For example, when the spot diameter
of the excitation light is 1 mmϕ or so, the above-described assay area is normally
designed to have an area of at least several mm-square.
[0079] In cases where a SPFS system of "flow-path type" in which various solutions are transferred
through a closed flow path is employed, a "flow cell" having holes for forming a flow
path is mounted on the sensor chip and, as required, a "top plate" having a solution
inlet and a solution outlet at the positions corresponding to the holes of the above-described
flow cell is further mounted on the flow cell. These components are tightly adhered
with each other and immobilized to construct a measuring member. The sensor chip surface
at the positions corresponding to the holes of the above-described flow cell constitutes
the bottom surface of the flow path and the measurement region is formed thereon.
In the case of a flow path-type system, for example, by using a liquid transfer means
comprising a pump or tube, various liquids can be introduced to the flow path via
the solution inlet and discharged from the solution outlet. As required, the liquid
transfer can also be performed in a reciprocating manner or circulating manner. The
conditions such as liquid transfer rate and liquid transfer (circulation) time can
be adjusted as appropriate, taking into consideration the sample amount, the analyte
concentration in the sample, the size of the flow path or well, the mode of the reaction
layer (e.g., the density of immobilized ligand), the pump performance and the like.
[0080] Meanwhile, in cases where a SPFS system of "well type" in which various solutions
are retained in a space larger than the above-described flow path is employed, a "well
member" having a through-hole for forming a well is mounted and immobilized on the
sensor chip to construct a measuring member. In the case of a well-type system, various
liquids can be added to and removed from the well using, for example, a pipette-form
member.
[0081] The above-described flow cell can be made of, for example, a sheet-form polydimethylsiloxane
(PDMS). The above-described top plate is produced from a transparent material so that
fluorescence emitted from the measurement region can be measured, and the top plate
can be made of, for example, a plate-form polymethylmethacrylate (PMMA). Alternatively,
the flow cell and the top plate can be made of plastic having a desired shape obtained
by molding or photolithography.
[0082] The means for tightly adhering and immobilizing the flow cell or well member on the
sensor chip is not particularly restricted and, generally, pressure can be physically
applied thereto from both the top and the bottom. If necessary, an adhesive having
the same refractive index as the transparent support, a matching oil, a transparent
adhesive sheet or the like may also be used.
<SPFS Measurement Apparatus>
[0083] The measurement method according to the present invention can be carried out using
an ordinary SPFS measurement apparatus. Basically, the SPFS measurement apparatus
has a detachable measuring member for SPFS and comprises, for example, a light source
for irradiating an excitation light (preferably a laser beam) that has a wavelength
appropriate for the fluorescent material used; a prism for allowing the excitation
light to enter the backside of a metal thin film of a sensor chip at a prescribed
angle (when a sensor chip having a planar substrate-form transparent support is used);
a light receiver which receives light reflected by the metal thin film and measures
the intensity thereof; a lens for condensing fluorescence emitted from the fluorescent
material; a detector for measuring the intensity of the fluorescence; and various
filters that allow only light having a prescribed wavelength from the excitation light
and fluorescence to transmit therethrough and cut other lights.
[0084] For more concrete embodiments, reference can be made to various documents such as
Japanese Laid-open Patent Application (Kokai) No.
2010-145272, Japanese Laid-open Patent Application (Kokai) No.
2011-80935, Japanese Laid-open Patent Application (Kokai) No.
2008-102117 and Japanese Patent No.
3562912.
[0085] A more detailed example of the constitution of SPFS measurement apparatus will now
be described.
1. Constitution of Quantitative Measurement Apparatus
[0086] Fig. 5 is a drawing which schematically shows the outline of a quantitative measurement
apparatus for illustrating the method of quantitatively measuring an analyte according
to the present invention, and Fig. 6 is a partially enlarged view of the quantitative
measurement apparatus shown in Fig. 5.
[0087] As shown in Figs. 5 and 6, a quantitative measurement apparatus 10 of the present
invention comprises: a prism-shaped dielectric member 12 whose vertical cross-sectional
shape is substantially trapezoidal; and a sensor chip 16 having a metal film 14 formed
on a horizontal upper surface 12a of the dielectric member 12, and the sensor chip
16 is mounted to a sensor chip mounting section 18 of the quantitative measurement
apparatus 10.
[0088] Also, as shown in Fig. 5, a light source 20 is arranged on the side of a lower side
surface 12b of the dielectric member 12. From this light source 20, an incoming light
22 enters the side surface 12b of the dielectric member 12 from the lower outside
of the dielectric member 12 and is irradiated via the dielectric member 12 toward
the metal film 14 formed on the upper surface 12a of the dielectric member 12.
[0089] Further, between the light source 20 and the dielectric member 12, a polarizing filter,
which is used for P-polarizing a laser beam emitted from the light source 20 so as
to allow surface plasmon to be efficiently generated on the metal film 14, may also
be arranged.
[0090] As shown in Fig. 5, on the side of the other side surface 12c and inferiorly to the
dielectric member 12, a light-receiving means 26, which receives metal film-reflected
light 24 which is the incoming light 22 reflected by the metal film 14, is provided.
[0091] The light source 20 comprises an incidence angle-adjusting means (not shown), which
is capable of appropriately altering an incidence angle α1 of the incoming light 22
emitted from the light source 20 with respect to the metal film 14. Meanwhile, the
light-receiving means 26 also comprises a movable means not shown in the figure and
is constituted in such a manner to ensure reception of the metal film-reflected light
24 in synchronization with the light source 20 even when the reflection angle of the
metal film-reflected light 24 is altered.
[0092] An SPR-measuring section 28 of the quantitative measurement apparatus 10 according
to the present invention, which performs SPR measurement, is constituted by the sensor
chip 16, the light source 20 and the light-receiving means 26.
[0093] Further, above the sensor chip 16, a light-detecting means 32, which is used for
receiving fluorescence 30 emitted by excitation of the below-described fluorescent
substance, is provided.
[0094] Between the sensor chip 16 and the light-detecting means 32, for example, a cut filter
or a condenser lens may also be arranged.
[0095] An SPFS measurement section 34 of the quantitative measurement apparatus 10 according
to the present invention, which performs SPFS measurement, is constituted by the sensor
chip 16, the light source 20 and the light-detecting means 32.
[0096] Further, the light-receiving means 26 and the light-detecting means 32 are each connected
to a quantitative calculation means 40 and configured in such a manner that the amount
of the metal film-reflected light 24 received by the light-receiving means 26 and
the amount of the fluorescence 30 received by the light-detecting means 32 are transmitted
to the quantitative calculation means 40.
[0097] Moreover, in the sensor chip 16 of this example, a flow path 36 is formed on upper
surface 14a of the metal film 14. On a part of this flow path 36, a sensor section
38, in which a molecule (ligand) that specifically binds to an antigen to be detected
(analyte) is solid-phased, is arranged.
«Detection Kit»
[0098] The detection kit of the present invention is used in the above-described detection
method of the present invention. The detection kit of the present invention comprises:
- (1) a reagent which comprises a lectin that binds to plural kinds of sugar chains
including a specific sugar chain;
- (2) a reagent which comprises a glycohydrolase capable of cleaving at least one kind
of sugar chain to which the above-described lectin can bind, the at least one kind
of sugar chain excluding the above-described specific sugar chain among the plural
kinds of sugar chains; and
- (3) a reagent which comprises a molecule that binds to an antigen having the above-described
specific sugar chain.
[0099] The detection kit of the present invention may further comprise:
(4) a user manual in which the detection method of the present invention is described
as instruction; and/or
(5) a lectin-labeled reagent.
[0100] The (4) user manual included in the kit describes any one of the detection methods
according to the present invention as instruction for carrying out the method of the
present invention. As for a specific embodiment of the user manual, the user manual
may assume any embodiment as long as it can properly convey the above-described information.
For example, the user manual may be printed on a piece of paper, the package of the
kit, a label of the kit constituents or the like, or recorded in a medium readable
by a computer, such as a diskette or a CD.
[0101] The (5) lectin-labeled reagent included in the kit is a reagent to be used for labeling
a lectin and usually contains a label and a reagent which allows the lectin and label
to bind with each other.
«Application Examples»
[0102] The method of the present invention can be used in diagnosis of diseases. For example,
when the antigen to be detected (analyte) is a PSA, prostate adenocarcinoma can be
diagnosed based on the amount of PSA in a biological sample derived from a patient
that is quantified by the detection method of the present invention. In addition,
hepatocellular carcinoma can be diagnosed when the analyte is an AFP, and cancers
mainly associated with gastrointestinal tract can be diagnosed when the analyte is
a CEA.
EXAMPLES
[0103] The present invention will now be described in detail by way of examples thereof;
however, the present invention is not restricted thereto.
(Constitution of Quantitative Measurement Apparatus)
[0104] In the following Examples, as a measurement apparatus, the above-described SPFS measurement
apparatus which was personally produced by the present inventors was employed. This
SPFS measurement apparatus has the same constitution as the above-described quantitative
measurement apparatus 10.
[0105] In the above-described constitution, a laser diode (LD) capable of irradiating light
having a wavelength of 635 nm was used as the light source 20 and a light attenuation
filter (neutral density filter) was arranged as an optical filter between the light
source 20 and the dielectric member 12 so as to be able to adjust the photon amount.
[0106] Further, as the dielectric member 12, a 60° prism manufactured by Sigma Koki Co.,
Ltd. was used, and the sensor chip 16 was constructed by immobilizing the below-described
plasmon excitation sensor on the upper part of this dielectric member 12.
[0107] Moreover, on the upper part of the sensor chip 16, an objective lens was provided
as a condenser lens, and a photomultiplier tube (PMT) was used as the light-detecting
means 32.
(Preparation of Plasmon Excitation Sensor)
[0108] A glass-made transparent planar substrate having a refractive index of 1.72 and a
thickness of 1 mm (S-LAL 10, manufactured by Ohara Inc.) was cleaned with plasma and
a chromium thin film was formed on one side of this substrate by a sputtering method.
Then, on the surface of the thus formed chromium thin film, a gold thin film was further
formed by a sputtering method. The chromium thin film had a thickness of 1 to 3 nm
and the gold thin film had a thickness of 44 to 52 nm.
[0109] The substrate on which the gold thin film was formed in this manner was immersed
in an ethanol solution containing 1 mM of 10-carboxy-1-decanethiol for at least 24
hours to form a SAM film on the surface of the gold thin film. The substrate was then
removed from the solution and washed with ethanol and isopropanol, followed by drying
using an air gun.
[0110] A polydimethylsiloxane (PDMS) sheet, which had a groove of 0.5 mm in height serving
as a flow path as well as a through-hole at both ends of the groove, was disposed
on the substrate with the groove facing the SAM film such that the surface of the
SAM film was arranged inside the flow path. The PDMS sheet outside the flow path was
press-adhered from above, and the PDMS sheet (flow path 36) was immobilized with the
plasmon excitation sensor.
(Solid-phasing of Antibody)
[Preparation Example 1]
[Anti-PSA Antibody-Solid Phased SAM Film (Substrate)]
[0111] In the external flow path to which the plasmon excitation sensor was connected as
described above, ultrapure water and then phosphate buffered saline (PBS) were circulated
for 10 minutes and 20 minutes, respectively, using a peristaltic pump at a room temperature
(25°C) and a flow rate of 500 µL/min, thereby equilibrating the surface of the plasmon
excitation sensor.
[0112] Subsequently, after transferring and circulating 5 mL of a phosphate buffered saline
(PBS) containing 50 mM of N-hydroxysuccinic acid imide (NHS) and 100 mM of water-soluble
carbodiimide (WSC) for 20 minutes, 2. 5 mL of an anti-PSA monoclonal antibody solution
(No.79, 2.5 mg/mL; manufactured by Mikuri Immunolaboratory, Ltd.) was circulated for
30 minutes to solid-phase the antibody on the SAM film, thereby preparing an anti-PSA
antibody-solid phased SAM film.
[0113] It is noted here that a non-specific adsorption-inhibiting treatment was performed
in the flow path by circulating therein a phosphate buffered saline (PBS) containing
1 wt% of bovine serum albumin (BSA) for 30 minutes.
[0114] As shown in Fig. 7, the sensor section 38 before transfer of various pooled serum
samples thereto is in a condition where the above-described antibody (ligand 44) is
formed.
[Preparation Example 2]
[Anti-AFP Antibody-Solid Phased SAM Film (Substrate)]
[0115] An anti-AFP antibody-solid phased SAM film was prepared in the same manner as in
Preparation Example 1, except that an anti-AFP monoclonal antibody (1D5, 2.5 mg/mL;
manufactured by Japan Clinical Laboratories, Inc.) was used in place of the anti-PSA
antibody.
(Preparation of Labeled Lectins)
[Production Example 1]
[Fluorescently-labeled WFA Lectin]
[0116] A fluorescently-labeled WFA lectin was produced using a fluorescent substance labeling
kit, "Alexa Fluor (registered trademark) 647 Protein Labeling Kit" (manufactured by
Invitrogen Corp.). Then, 100 µg equivalent of a WFA lectin (L-1350, manufactured by
Vector Laboratories, Inc.), 0.1M sodium bicarbonate and Alexa Fluor 647 reactive dye
were mixed and allowed to react at room temperature for 1 hour. Subsequently, the
resultant was subjected to gel filtration chromatography and ultrafiltration, thereby
removing Alexa Fluor 647 reactive dye that was not utilized in labeling to obtain
a fluorescently-labeled WFA lectin. Thereafter, the absorbance was measured to determine
the concentration of the labeled lectin.
[Production Example 2]
[Fluorescently-labeled LCA Lectin]
[0117] A fluorescently-labeled LCA lectin was produced using a fluorescent substance labeling
kit. The fluorescently-labeled LCA lectin was obtained in the same manner as in Production
Example 1, except that an LCA lectin (L-1040, manufactured by Vector Laboratories,
Inc.) was used as the lectin.
<Measurement of PSA in Serum Sample>
[Example 1]
(Measurement of PSA in Serum Sample (1))
[0118] Each sample was subjected to an enzyme treatment with galactosidase and then brought
into contact with the thus obtained fluorescently-labeled WFA lectin (Production Example
1). Subsequently, the resulting sample was allowed to react with the anti-PSA antibody-solid
phased substrate (Preparation Example 1). More particularly, measurement of PSA in
each sample was carried out as follows.
[0119] A total of 10 samples, consisting of 5 kinds of PSA-free pooled human sera (normal
human pooled sera, manufactured by Kohj in Bio Co., Ltd.) and 5 serum samples in which
a LNCaP (human prostate adenocarcinomal cell line) culture supernatant was added to
the respective PSA-free pooled sera at a PSA concentration of 50 pg/mL, were prepared
and then 2-fold diluted with PBS to obtain measurement samples. As the above-described
PSA-free pooled human sera, normal human pooled sera were purchased from Kohjin Bio
Co., Ltd. and confirmed by ELISA to have a PSA concentration of not higher than 0.01
ng/mL.
[0120] To 0.1 mL of each measurement sample, galactosidase derived from
Bacteroides fragilis was added to a final concentration of 50 mU, and the resultant was allowed to react
at 37°C for 1 hour. Then, as a fluorescently-labeled probe 48, 0.1 mL of a solution
of WFA lectin labeled with Alexa Fluor 647 (in which the Alexa Fluor 647-labeled WFA
lectin was dissolved in phosphate buffered saline (PBS) at a concentration of 1 µg/mL)
was added, and the resultant was allowed to react at room temperature for 1 hour.
The resulting measurement sample, which was thus subjected to the galactosidase treatment
and lectin reaction, was added in an amount of 0.1 mL to the flow path and circulated
therein for 20 minutes at a flow rate of 200 µL/min. Subsequently, TBS containing
0.05 wt% of Tween 20 (TBS-T) was introduced thereto to perform 5-minute washing. Thereafter,
SPFS measurement was carried out using the quantitative measurement apparatus. Measurement
samples were also prepared without the galactosidase treatment step and subj ected
to SPFS measurement in the same manner. Fig. 8 is an enlarged view which schematically
shows the sensor section after the transfer of the labeled lectin thereto.
[0121] The results of preparing and measuring the measurement samples by the above-described
methods are shown in Table 2 below. The results shown in Table 2 are actually measured
values. The signal values of the PSA-added sera denote those of "PSA-originated signal
value + background".
[Table 2]
| Table 2: Relationship between Enzyme Treatment in Solution and Background (PSA) |
| |
Galactosidase (-) |
Galactosidase (+) |
| Pooled serum 1 (PSA-free) |
57,600 |
30,200 |
| Pooled serum 2 (PSA-free) |
55,400 |
38,900 |
| Pooled serum 3 (PSA-free) |
58,000 |
43,000 |
| Pooled serum 4 (PSA-free) |
52,000 |
32,300 |
| Pooled serum 5 (PSA-free) |
49,900 |
35,600 |
| Pooled serum 1 (with addition of LNCaP-derived PSA at 50 pg/mL) |
107,600 |
80,300 |
| Pooled serum 2 (with addition of LNCaP-derived PSA at 50 pg/mL) |
110,400 |
92,300 |
| Pooled serum 3 (with addition of LNCaP-derived PSA at 50 pg/mL) |
110,200 |
82,900 |
| Pooled serum 4 (with addition of LNCaP-derived PSA at 50 pg/mL) |
110,200 |
88,300 |
| Pooled serum 5 (with addition of LNCaP-derived PSA at 50 pg/mL) |
110,800 |
83,600 |
[0122] It was confirmed that, in the measurement samples treated with galactosidase, the
values of the respective PSA-free pooled sera (background) were reduced to a level
of about 3/5 as compared to the untreated samples.
[0123] In addition, while the average S/N ratio value (signal value of PSA-added serum/signal
value of corresponding PSA-free serum) of 5 samples was 2.02 in the untreated samples,
it was increased to 2.41 in the galactosidase-treated samples, revealing that the
detection sensitivity was increased.
[Example 2]
(Measurement of PSA in Serum Sample (2))
[0124] Each sample was subjected to an enzyme treatment with galactosidase and then allowed
to react with the anti-PSA antibody-solid phased substrate (Preparation Example 1).
Thereafter, the resulting sample was brought into contact with the fluorescently-labeled
WFA lectin (Production Example 1). More particularly, measurement of PSA in each sample
was carried out as follows.
[0125] A total of 10 samples, consisting of 5 kinds of PSA-free pooled sera and 5 serum
samples in which a LNCaP culture supernatant was added to the respective PSA-free
pooled sera at a PSA concentration of 50 pg/mL, were prepared and then 2-fold diluted
with PBS to obtain measurement samples. To each measurement sample, galactosidase
derived from
Bacteroides fragilis was added to a final concentration of 50 mU, and the resultant was allowed to react
at 37°C for 1 hour. The thus galactosidase-treated measurement sample was added in
an amount of 0.1 mL to the flow path and circulated therein for 20 minutes at a flow
rate of 200 µL/min. Subsequently, TBS containing 0.05 wt% of Tween 20 (TBS-T) was
introduced thereto to perform 5-minute washing. After the reaction, as the fluorescently-labeled
probe 48, 0.1 mL of a solution of WFA lectin labeled with Alexa Fluor 647 (in which
the Alexa Fluor 647-labeled WFA lectin was dissolved in phosphate buffered saline
(PBS) at a concentration of 1 µg/mL) was added, and the resultant was allowed to flow
for 5 minutes at a flow rate of 200 µL/min. Once again, TBS containing 0.05 wt% of
Tween 20 (TBS-T) was introduced to perform 5-minute washing. Thereafter, SPFS measurement
was carried out using the quantitative measurement apparatus. Measurement samples
were also prepared without the galactosidase treatment step and subsequently subjected
to SPFS measurement.
[0126] The results of measuring the measurement samples by the above-described method are
shown in Table 3 below. The results shown in Table 3 are actually measured values.
The signal values of the PSA-added sera denote those of "PSA-originated signal value
+ background".
[Table 3]
| Table 3: Relationship between Enzyme Treatment in Solution and Background (PSA) |
| |
Galactosidase (-) |
Galactosidase (+) |
| Pooled serum 1 (PSA-free) |
32,100 |
10,200 |
| Pooled serum 2 (PSA-free) |
33,400 |
9,900 |
| Pooled serum 3 (PSA-free) |
35,000 |
14,000 |
| Pooled serum 4 (PSA-free) |
32,000 |
12,300 |
| Pooled serum 5 (PSA-free) |
32,500 |
11,300 |
| Pooled serum 1 (with addition of LNCaP-derived PSA at 50 pg/mL) |
84,100 |
60,300 |
| Pooled serum 2 (with addition of LNCaP-derived PSA at 50 pg/mL) |
88,400 |
62,300 |
| Pooled serum 3 (with addition of LNCaP-derived PSA at 50 pq/mL) |
89,300 |
63,900 |
| Pooled serum 4 (with addition of LNCaP-derived PSA at 50 pg/mL) |
90,200 |
68,300 |
| Pooled serum 5 (with addition of LNCaP-derived PSA at 50 pg/mL) |
82,800 |
59,300 |
[0127] It was confirmed that, in the measurement samples treated with galactosidase, the
signal values of the respective PSA-free pooled sera (background) were reduced to
a level of about 1/3 as compared to the untreated samples.
[0128] In addition, while the average S/N ratio value (signal value of PSA-added serum/signal
value of corresponding PSA-free serum) of 5 samples was 2.64 in the untreated samples,
it was increased to 5.51 in the galactosidase-treated samples, revealing that the
detection sensitivity was increased.
[Example 3]
(Measurement of PSA in Serum Sample (3))
[0129] Next, a method of performing an enzyme treatment on a substrate will also be described.
[0130] After allowing each sample to react with the anti-PSA antibody-solid phased substrate
(Preparation Example 1), the resulting sample was subjected to an enzyme treatment
with galactosidase and then brought into contact with the fluorescently-labeled WFA
lectin (Production Example 1). More particularly, measurement of PSA in each sample
was carried out as follows.
[0131] A total of 10 samples, consisting of 5 kinds of PSA-free pooled sera and 5 serum
samples in which a LNCaP culture supernatant was added to the respective PSA-free
pooled sera at a PSA concentration of 50 pg/mL, were prepared and then 2-fold diluted
with PBS to obtain measurement samples. The thus obtained 10 pooled serum sample solutions
were each added in an amount of 0.1 mL to the flow path and circulated therein for
20 minutes. Subsequently, 0.1 mL of a solution containing 50 mU of galactosidase derived
from
Bacteroides fragilis or PBS(-) was added and the resultant was circulated for 20 minutes. Thereafter,
TBS containing 0. 05 wt% of Tween 20 (TBS-T) was introduced thereto to perform 5-minute
washing at a flow rate of 200 µL/min. After the washing, as the fluorescently-labeled
probe 48, 0.1 mL of a solution of WFA lectin labeled with Alexa Fluor 647 (in which
the Alexa Fluor 647-labeled WFA lectin was dissolved in phosphate buffered saline
(PBS) at a concentration of 1 µg/mL) was added, and the resultant was allowed to flow
for 5 minutes at a flow rate of 200 µL/min. Then, TBS containing 0.05 wt% of Tween
20 (TBS-T) was again introduced thereto to perform 5-minute washing at a flow rate
of 200 µL/min. Finally, SPFS measurement was carried out using the quantitative measurement
apparatus. The SPFS measurement was also carried out for samples that were prepared
without the galactosidase treatment step.
[0132] The results are shown in Table 4. The results shown in Table 4 are actually measured
values. The signal values of the PSA-added sera denote those of "PSA-originated signal
value + background".
[Table 4]
| Table 4: Relationship between Enzyme Treatment on Substrate and Background (PSA) |
| |
Galactosidase (-) |
Galactosidase (+) |
| Pooled serum 1 (PSA-free) |
22,300 |
4,000 |
| Pooled serum 2 (PSA-free) |
21,400 |
4,500 |
| Pooled serum 3 (PSA-free) |
20,200 |
3,400 |
| Pooled serum 4 (PSA-free) |
18,000 |
4,800 |
| Pooled serum 5 (PSA-free) |
22,200 |
5,200 |
| Pooled serum 1 (with addition of LNCaP-derived PSA at 50 pg/mL) |
67,300 |
58,000 |
| Pooled serum 2 (with addition of LNCaP-derived PSA at 50 pg/mL) |
71,400 |
56,900 |
| Pooled serum 3 (with addition of LNCaP-derived PSA at 50 pg/mL) |
73,200 |
53,400 |
| Pooled serum 4 (with addition of LNCaP-derived PSA at 50 pq/mL) |
76,300 |
57,800 |
| Pooled serum 5 (with addition of LNCaP-derived PSA at 50 pg/mL) |
72,700 |
52,200 |
[0133] It was confirmed that, in the measurement samples treated with galactosidase on the
substrate, the values of the respective PSA-free pooled sera (background) were reduced
to a level of about 1/4 as compared to the untreated samples.
[0134] In addition, while the average S/N ratio value (signal value of PSA-added serum/signal
value of corresponding PSA-free serum) of 5 samples was 3.50 in the untreated samples,
it was increased to 12.99 in the galactosidase-treated samples, revealing that the
detection sensitivity was increased.
[0135] As shown in the above Examples 1 to 3, it was confirmed that non-specific binding
signal generated in the measurement system by serum component can be suppressed by
cleaving galactose on serum glycoprotein and that the sensitivity for specifically
detecting the GalNAc sugar chain structure on PSA is consequently improved.
[0136] Moreover, as a result of comparing Examples 2 and 3, it was confirmed that the enzyme
treatment exerts superior effect when performed on an antibody-immobilized substrate
with a certain level of focus on the treatment subject than when the enzyme is made
to act in a solution containing a large amount of serum proteins.
<Measurement of AFP in Serum Sample>
[0137] In the above Examples 1 to 3, tests were conducted using PSA as a detection subject;
however, a similar test was also performed here using AFP as a detection subject.
This test will be described below as Examples 4 to 6. In Examples 4 to 6, a total
of 10 samples, consisting of 5 kinds of AFP-free pooled sera used as negative control
samples and 5 serum samples used as positive control samples in which µTASWako AFP-L3
Control L (trade name, manufactured by Wako Pure Chemical Industries, Ltd.; L3 = 20%,
AFP concentration = 200 ng/mL) was added to the respective AFP-free pooled sera at
an AFP concentration of 1.0 ng/mL, were prepared. Here, as the above-described AFP-free
pooled human sera, normal human pooled sera were purchased from Kohjin Bio Co., Ltd.
and confirmed by ELISA to have an AFP concentration of not higher than 0.01 ng/mL.
[Example 4]
(Measurement of AFP in Serum Sample (1))
[0138] Each sample was subjected to an enzyme treatment with mannosidase and then brought
into contact with the fluorescently-labeled LCA lectin (Production Example 2). Subsequently,
the resulting sample was allowed to react with the anti-AFP antibody-solid phased
substrate (Preparation Example 2).
[0139] More particularly, measurement of AFP in each sample was carried out in the same
manner as in Example 1, except that: mannosidase derived from
Canavalia ensiformis (GKX-5010, manufactured by ProZyme, Inc.) was used in place of the galactosidase;
the fluorescently-labeled LCA lectin (Production Example 2) was used in place of the
fluorescently-labeled WFA lectin (Production Example 1); and the anti-AFP antibody-solid
phased substrate (Preparation Example 2) was used in place of the anti-PSA antibody-solid
phased substrate (Preparation Example 1).
[0140] The results of preparing and measuring the measurement samples by the above-described
methods are shown in Table 5 below. The results shown in Table 5 are actually measured
values. The signal values of the AFP-added sera denote those of "AFP-originated signal
value + background".
[Table 5]
| Table 5: Relationship between Enzyme Treatment in Solution and Background (AFP) |
| |
Mannosidase (-) |
Mannosidase (+) |
| Pooled serum 1 (AFP-free) |
220,000 |
150,000 |
| Pooled serum 2 (AFP-free) |
240,000 |
180,000 |
| Pooled serum 3 (AFP-free) |
256,000 |
170,200 |
| Pooled serum 4 (AFP-free) |
220,000 |
193,000 |
| Pooled serum 5 (AFP-free) |
230,000 |
170,000 |
| Pooled serum 1 (with addition of AFP-L3 at 1.0 ng/mL) |
940,400 |
800,100 |
| Pooled serum 2 (with addition of AFP-L3 at 1.0 ng/mL) |
994,000 |
880,400 |
| Pooled serum 3 (with addition of AFP-L3 at 1.0 ng/mL) |
998,300 |
911,100 |
| Pooled serum 4 (with addition of AFP-L3 at 1.0 ng/mL) |
1,002,000 |
916,000 |
| Pooled serum 5 (with addition of AFP-L3 at 1.0 ng/mL) |
931,300 |
917,000 |
[0141] It was confirmed that, in the measurement samples treated with mannosidase, the values
of the respective AFP-free pooled sera (background) were reduced to a level of about
3/4 as compared to almost all of the untreated samples. It was also confirmed that,
in this case, the AFP-L3-added sera had almost no difference in their measured values.
[0142] In addition, while the average S/N ratio value (signal value of AFP-L3-added serum/signal
value of corresponding AFP-free serum) of 5 samples was 4.18 in the untreated samples,
it was increased to 5.14 in the galactosidase-treated samples, revealing that the
detection sensitivity was increased.
[Example 5]
(Measurement of AFP in Serum Sample (2))
[0143] Each sample was subjected to an enzyme treatment with mannosidase and then allowed
to react with the anti-AFP antibody-solid phased substrate (Preparation Example 2).
Thereafter, the resulting sample was brought into contact with the fluorescently-labeled
LCA lectin (Production Example 2).
[0144] More particularly, measurement of AFP in each sample was carried out in the same
manner as in Example 2, except that: mannosidase derived from
Canavalia ensiformis (GKX-5010, manufactured by ProZyme, Inc.) was used in place of the galactosidase;
the fluorescently-labeled LCA lectin (Production Example 2) was used in place of the
fluorescently-labeled WFA lectin (Production Example 1); and the anti-AFP antibody-solid
phased substrate (Preparation Example 2) was used in place of the anti-PSA antibody-solid
phased substrate (Preparation Example 1).
[0145] The results of measuring the measurement samples by the above-described method are
shown in Table 6 below. The results shown in Table 6 are actually measured values.
The signal values of the AFP-added sera denote those of "AFP-originated signal value
+ background".
[Table 6]
| Table 6: Relationship between Enzyme Treatment in Solution and Background (AFP) |
| |
Mannosidase (-) |
Mannosidase (+) |
| Pooled serum 1 (AFP-free) |
123,000 |
50,200 |
| Pooled serum 2 (AFP-free) |
140,000 |
80,900 |
| Pooled serum 3 (AFP-free) |
143,000 |
59,200 |
| Pooled serum 4 (AFP-free) |
141,000 |
76,300 |
| Pooled serum 5 (AFP-free) |
135,000 |
70,300 |
| Pooled serum 1 (with addition of AFP-L3 at 1.0 ng/mL) |
843,400 |
700,300 |
| Pooled serum 2 (with addition of AFP-L3 at 1.0 ng/mL) |
894,000 |
781,300 |
| Pooled serum 3 (with addition of AFP-L3 at 1.0 ng/mL) |
885,300 |
800,100 |
| Pooled serum 4 (with addition of AFP-L3 at 1.0 ng/mL) |
923,000 |
799,300 |
| Pooled serum 5 (with addition of AFP-L3 at 1.0 ng/mL) |
836,300 |
817,300 |
[0146] It was confirmed that, in the measurement samples treated with mannosidase, the values
of the respective AFP-free pooled sera (background) were reduced to a level of about
1/2 as compared to almost all of the untreated samples. It was also confirmed that,
in this case, the AFP-L3-added sera had almost no difference in their measured values.
[0147] In addition, while the average S/N ratio value (signal value of AFP-L3-added serum/signal
value of corresponding AFP-free serum) of 5 samples was 6.43 in the untreated samples,
it was increased to 11.84 in the galactosidase-treated samples, revealing that the
detection sensitivity was increased.
[Example 6]
(Measurement of AFP in Serum Sample (3))
[0148] Next, a method of performing an enzyme treatment on a substrate will also be described.
[0149] After allowing each sample to react with the anti-AFP antibody-solid phased substrate
(Preparation Example 2), the resulting sample was subjected to an enzyme treatment
with mannosidase and then brought into contact with the fluorescently-labeled LCA
lectin (Production Example 2).
[0150] More particularly, measurement of AFP in each sample was carried out in the same
manner as in Example 3, except that: mannosidase derived from
Canavalia ensiformis (GKX-5010, manufactured by ProZyme, Inc.) was used in place of the galactosidase;
the fluorescently-labeled LCA lectin (Production Example 2) was used in place of the
fluorescently-labeled WFA lectin (Production Example 1); and the anti-AFP antibody-solid
phased substrate (Preparation Example 2) was used in place of the anti-PSA antibody-solid
phased substrate (Preparation Example 1).
[0151] The results are shown in Table 7 below. The results shown in Table 7 are actually
measured values. The signal values of the AFP-added sera denote those of "AFP-originated
signal value + background".
[Table 7]
| Table 7: Relationship between Enzyme Treatment on Substrate and Background (AFP) |
| |
Mannosidase (-) |
Mannosidase (+) |
| Pooled serum 1 (AFP-free) |
102,100 |
40,200 |
| Pooled serum 2 (AFP-free) |
104,400 |
39,900 |
| Pooled serum 3 (AFP-free) |
105,000 |
51,000 |
| Pooled serum 4 (AFP-free) |
129,000 |
35,300 |
| Pooled serum 5 (AFP-free) |
118,500 |
46,300 |
| Pooled serum 1 (with addition of AFP-L3 at 1.0 ng/mL) |
884,100 |
790,300 |
| Pooled serum 2 (with addition of AFP-L3 at 1.0 ng/mL) |
929,400 |
896,300 |
| Pooled serum 3 (with addition of AFP-L3 at 1.0 ng/mL) |
935,300 |
896,900 |
| Pooled serum 4 (with addition of AFP-L3 at 1.0 ng/mL) |
869,200 |
693,300 |
| Pooled serum 5 (with addition of AFP-L3 at 1.0 ng/mL) |
868,800 |
795,300 |
[0152] It was confirmed that, in the measurement samples treated with mannosidase on the
substrate, the values of the respective AFP-free pooled sera (background) were reduced
to a level of about 2/5 as compared to almost all of the untreated samples.
[0153] In addition, while the average S/N ratio value (signal value of AFP-L3-added serum/signal
value of corresponding AFP-free serum) of 5 samples was 8.11 in the untreated samples,
it was increased to 19.31 in the galactosidase-treated samples, revealing that the
detection sensitivity was increased.
[0154] As shown in the above Examples 4 to 6, it was confirmed that non-specific binding
signal generated in the measurement system by serum component can be suppressed by
cleaving mannose on serum glycoprotein and that the sensitivity for specifically detecting
the fucose sugar chain structure on AFP is consequently improved.
[0155] Moreover, as a result of comparing Examples 5 and 6, it was confirmed that the enzyme
treatment exerts superior effect when performed on an antibody-immobilized substrate
with a certain level of focus on the treatment subject than when the enzyme is made
to act in a solution containing a large amount of serum proteins.
[0156] In the above Examples, an embodiment where various solutions are circulated in a
SPFS measurement apparatus was described as an example; however, a solution is not
necessarily required to be circulated and a variety of modifications, such as an embodiment
where a solution is continuously transferred in one direction, an embodiment where
a solution is transferred in a reciprocating manner in both directions and an embodiment
where a solution of a prescribed amount is transferred and then retained for a prescribed
period, can be applied within the scope of the objects of the present invention.
DESCRIPTION OF SYMBOLS
[0157]
10: Quantitative measurement apparatus
12: Dielectric member
12a: Upper surface
12b: Side surface
12c: Side surface
14: Metal film
14a: Upper surface
16: Sensor chip
18: Sensor chip mounting section
20: Light source
22: Incoming light
24: Metal film-reflected light
26: Light-receiving means
28: SPR-measuring section
30: Fluorescence
32: Light-detecting means
34: SPFS measurement section
36: Fine flow path
38: Sensor section
40: Quantitative calculation means
44: Antigen-binding molecule (ligand)
46: Antigen to be detected (analyte)
46a: Antigen having a specific sugar chain
4 6b: Sugar chain excluding a specific sugar chain, to which a lectin does not bind
46c: Specific sugar chain
46d: Sugar chain excluding a specific sugar chain, to which a lectin can bind
48: Fluorescently-labeled lectin (probe)
50: Non-specifically adsorbing serum glycoprotein in serum
50a: Protein having a sugar chain
51: Non-specifically adsorbing serum glycoprotein whose terminal sugar chain is cleaved
with an enzyme
52: Non-specifically adsorbing glycolipid in serum
52a: Lipid having a sugar chain
53: Non-specifically adsorbing glycolipid whose terminal sugar chain is cleaved with
an enzyme
60: Lectin binding to plural kinds of sugar chains including a specific sugar chain
61: Label
70: Glycohydrolase
80: Support
81: Reaction system