[0001] The present invention refers to protein kinase inhibitors and more specifically to
the inhibitors of the protein kinase c-Jun amino terminal kinase, chimeric peptides
for use in the treatment of various novel diseases or disorders strongly related to
JNK signaling, wherein the disease or disorder is cystitis.
[0002] The c-Jun amino terminal kinase (JNK) is a member of the stress-activated group of
mitogen-activated protein (MAP) kinases. These kinases have been implicated in the
control of cell growth and differentiation, and, more generally, in the response of
cells to environmental stimuli. The JNK signal transduction pathway is activated in
response to environmental stress and by the engagement of several classes of cell
surface receptors. These receptors can include cytokine receptors, serpentine receptors
and receptor tyrosine kinases. In mammalian cells, JNK has been implicated in biological
processes such as oncogenic transformation and mediating adaptive responses to environmental
stress. JNK has also been associated with modulating immune responses, including maturation
and differentiation of immune cells, as well as effecting programmed cell death in
cells identified for destruction by the immune system. This unique property makes
JNK signaling a promising target for developing pharmacological intervention. Among
several neurological disorders, JNK signaling is particularly implicated in ischemic
stroke and Parkinson's disease, but also in other diseases as mentioned further below.
Furthermore, the mitogen-activated protein kinase (MAPK) p
38alpha was shown to negatively regulate the cell proliferation by antagonizing the
JNK-cJun-pathway. The mitogen-activated protein kinase (MAPK) p
38alpha therefore appears to be active in suppression of normal and cancer cell proliferation
and, as a further, demonstrates the involvement of JNK in cancer diseases (see e.g.
Hui et al., Nature Genetics, Vol 39, No. 6, June 2007). It was also shown, that c-Jun N-terminal Kinase (JNK) is involved in neuropathic
pain produced by spinal nerve ligation (SNL), wherein SNL induced a slow and persistent
activation of JNK, in particular JNK1, wheras p38 mitogen-activated protein kinase
activation was found in spinal microglia after SNL, which had fallen to near basal
lavel by 21 days (
Zhuang et al., The Journal of Neuroscience, March 29, 2006, 26(13):3551-3560)).
[0003] Inhibition or interruption of JNK signaling pathway, particularly the provision of
inhibitors of the JNK signaling pathway, thus appears to be a promising approach in
combating disorders strongly related to JNK signaling. However, there are only a few
inhibitors of the JNK signaling pathway known so far.
[0004] Inhibitors of the JNK signaling pathway as already known in the prior art, particularly
include e.g. upstream kinase inhibitors (for example, CEP-1347), small chemical inhibitors
of JNK (SP600125 and AS601245), which directly affect kinase activity e.g. by competing
with the ATP-binding site of the protein kinase, and peptide inhibitors of the interaction
between JNK and its substrates (D-JNKI and I-JIP) (see e.g.
Kuan et al., Current Drug Targets - CNS & Neurological Disorders, February 2005, vol.
4, no. 1, pp. 63-67(5)).
[0005] The upstream kinase inhibitor CEP-1347 (KT7515) is a semisynthetic inhibitor of the
mixed lineage kinase family. CEP-1347 (KT7515) promotes neuronal survival at dosages
that inhibit activation of the c-Jun amino-terminal kinases (JNKs) in primary embryonic
cultures and differentiated PC12 cells after trophic withdrawal and in mice treated
with 1-methyl-4-phenyl tetrahydropyridine. Further, CEP-1347 (KT7515) can promote
long term-survival of cultured chick embryonic dorsal root ganglion, sympathetic,
ciliary and motor neurons (see e.g.
Borasio et al., Neuroreport. 9(7): 1435-1439, May 11th 1998.).
[0006] The small chemical JNK inhibitor SP600125 was found to reduce the levels of c-Jun
phosphorylation, to protect dopaminergic neurons from apoptosis, and to partly restore
the level of dopamine in MPTP-induced PD in C57BL/6N mice (
Wang et al., Neurosci Res. 2004 Feb; 48(2); 195-202). These results furthermore indicate that JNK pathway is the major mediator of the
neurotoxic effects of MPTP
in vivo and inhibiting JNK activity may represent a new and effective strategy to treat PD.
[0007] A further example of small chemical inhibitors is the aforementioned JNK-Inhibitor
AS601245. AS601245 inhibits the JNK signalling pathway and promotes cell survival
after cerebral ischemia.
In vivo, AS601245 provided significant protection against the delayed loss of hippocampal
CA1 neurons in a gerbil model of transient global ischemia. This effect is mediated
by JNK inhibition and therefore by c-Jun expression and phosphorylation (see e.g.
Carboni et al., J Pharmacol Exp Ther. 2004 Jul; 310(1):25-32. Epub 2004 Feb 26th).
[0008] A third class of inhibitors of the JNK signaling pathway represent peptide inhibitors
of the interaction between JNK and its substrates, as mentioned above. As a starting
point for construction of such JNK inhibitor peptides a sequence alignment of naturally
occurring JNK proteins may be used. Typically, these proteins comprise JNK binding
domains (JBDs) and occur in various insulin binding (IB) proteins, such as IB1 or
IB2. The results of such an exemplary sequence alignment is e.g. a sequence alignment
between the JNK binding domains of IB1 [SEQ ID NO: 13], IB2 [SEQ ID NO: 14], c-Jun
[SEQ ID NO: 15] and ATF2 [SEQ ID NO: 16] (see e.g. FIGS. 1A-1C). Such an alignment
reveals a partially conserved 8 amino acid sequence (see e.g. Figure 1A). A comparison
of the JBDs of IB1 and IB2 further reveals two blocks of seven and three amino acids
that are highly conserved between the two sequences.
[0009] Sequences constructed on basis of such an alignment are e.g. disclosed in
WO 01/27268 or in
WO 2007/031280.
WO 2007/031280 and
WO 01/27268 disclose small cell permeable fusion peptides, comprising a so-called TAT cell permeation
sequence derived from the basic trafficking sequence of the HIV-TAT protein and a
minimum 20 amino acid inhibitory sequence of IB1. Both components are covalently linked
to each other. Exemplary (and at present the only) inhibitors of the MAPK-JNK signaling
pathway disclosed in both
WO 2007/031280 and
WO 01/27268, are e.g. L-JNKI1 (JNK-inhibitor peptide composed of L amino acids) or the protease
resistant D-JNKI1 peptides (JNK-inhibitor peptide composed of non-native D amino acids).
These JNK-inhibitor (JNKI) peptides are specific for JNK (JNK1, JNK2 and JNK3). In
contrast to those small compound inhibitors as discussed above, the inhibitor sequences
in
WO 2007/031280 or
WO 01/27268, e.g. JNKI1, rather inhibit the interaction between JNK and its substrate. By its
trafficking sequence derived from TAT, the fusion peptide is efficiently transported
into cells. Due to the novel properties obtained by the trafficking component the
fusion peptides are actively transported into cells, where they remain effective until
proteolytic degradation.
[0010] However, peptides according to
WO 2007/031280 or
WO 01/27268 have only shown to be active in a particularly limited number of diseases, particularly
non-malignant or immunological-related cell proliferative diseases.
[0011] One object of the present invention is thus, to identify further diseases, which
can be combated with JNK inhibitor peptides. Another object of the present invention
is to provide new JNK inhibitor peptides and derivatives thereof for use in the treatment
and/or prevention of those diseases and of diseases not yet or already known to be
strongly related to JNK signaling.
[0012] This object is solved by a JNK inhibitor chimeric peptide comprising at least one
first domain and at least one second domain linked by a covalent bond, the first domain
comprising a trafficking sequence, and the second domain comprising a JNK inhibitor
sequence as defined in SEQ ID NO: 11, for use in treating and/or preventing various
inflammatory or non-inflammatory diseases strongly related to JNK signaling in a subject
by intravesical administration, wherein the diseases or disorders are selected from:
cystitis in general, in particular interstitial cystitis.
C-Jun N-terminal kinases (JNKs) are serine-threonine protein kinases, coded by three
genes JNK1, JNK2, and JNK3, expressed as ten different isoforms by mRNA alternative
splicing, each isoforms being expressed as a short form (46 kDa) and a long form (54
kDa) (Davis, 2000, Cell 103: 239-52). While JNK1 and JNK2 are ubiquitous, JNK3 is
mainly expressed in the brain (
Kyriakis and Avruch, 2001, Physiol Rev 81: 807-69). JNKs are activated by phosphorylation (pJNK) through MAPKinase activation by extracellular
stimuli, such as ultraviolet stress, cytokines and AB peptides and they have multiple
functions including gene expression regulation, cell proliferation and apoptosis (
Dhanasekaran and Reddy, 2008, Oncogene 27: 6245-51).
[0013] The present invention is suitable for use in the treatment of diseases resulting
in loss of bladder function. Such diseases are selected from cystitis in general,
in particular interstitial cystitis.
[0014] Typically, a JNK inhibitor sequence as defined above may be derived from a human
or rat IB1 sequence, preferably from an amino acid sequence as defined or encoded
by any of sequences according to SEQ ID NO: 102 (depicts the IB1 cDNA sequence from
rat and its predicted amino acid sequence), SEQ ID NO: 103 (depicts the IB1 protein
sequence from rat encoded by the exon-intron boundary of the RIB1 gene - splice donor),
SEQ ID NO: 104 (depicts the IB1 protein sequence from
Homo sapiens), or SEQ ID NO: 105 (depicts the IB1 cDNA sequence from
Homo sapiens), more preferably from an amino acid sequence as defined or encoded by any of sequences
according to SEQ ID NO: 104 (depicts the IB1 protein sequence from
Homo sapiens), or SEQ ID NO: 105 (depicts the IB1 cDNA sequence from
Homo sapiens), or from any fragments or variants thereof. In other words, the JNK inhibitor sequence
comprises a fragment, variant, or variant of such fragment of a human or rat IB1 sequence.
Human or rat IB sequences are defined or encoded, respectively, by the sequences according
to SEQ ID NO: 102, SEQ ID NO: 103, SEQ ID NO: 104 or SEQ ID NO: 105.
[0015] According to a particular embodiment, a JNK inhibitor sequence as used herein typically
binds JNK and/or inhibits the activation of at least one JNK activated transcription
factor, e.g. c-Jun or ATF2 (see e.g. SEQ ID NOs: 15 and 16, respectively) or Elk1.
[0016] The JNK inhibitor sequence as used herein comprises one amino acid sequence according
to SEQ ID NO: 2.
[0017] The JNK inhibitor sequences as used herein is composed in part or exclusively of
D-amino acids as defined above. More preferably, these JNK inhibitor sequences composed
of D-amino acids are non-native D retro-inverso sequences of the above (native) JNK
inhibitor sequences. The term "retro-inverso sequences" refers to an isomer of a linear
peptide sequence in which the direction of the sequence is reversed and the chirality
of each amino acid residue is inverted (see e.g.
Jameson et al., Nature, 368,744-746 (1994);
Brady et al., Nature, 368, 692-693 (1994)). The advantage of combining D-enantiomers and reverse synthesis is that the positions
of carbonyl and amino groups in each amide bond are exchanged, while the position
of the side-chain groups at each alpha carbon is preserved. Unless specifically stated
otherwise, it is presumed that any given L-amino acid sequence or peptide described
may be converted into an D retro-inverso sequence or peptide by synthesizing a reverse
of the sequence or peptide for the corresponding native L-amino acid sequence or peptide.
[0018] The D retro-inverso sequences as used herein and as defined above have a variety
of useful properties. For example, D retro-inverso sequences as used herein enter
cells as efficiently as L-amino acid sequences as used herein, whereas the D retro-inverso
sequences as used herein are more stable than the corresponding L-amino acid sequences.
[0019] Accordingly, the JNK inhibitor sequences as used herein comprise one D retro-inverso
sequence according to the amino acid sequence NH
2-DQSRPVQPFLNLTTPRKPR-COOH (D-IB1(s)) [SEQ ID NO: 2].
[0020] The JNK inhibitor sequence as used herein (SEQ ID NO: 2) and the JNK inhibitor sequences
as disclosed above (SEQ ID NOs: 1, 3-4, 13-20 and 33-100) are presented in Table 1.
The table presents the name of the JNK inhibitor sequences, as well as their sequence
identifier number, their length, and amino acid sequence. Furthermore, Table 1 shows
sequences as well as their generic formulas, e.g. for SEQ ID NO's: 1, 2, 5, 6, 9 and
11 (according to the invention) and SEQ ID NO's: 3, 4, 7, 8, 10 and 12, respectively.
Table 1 furthermore discloses the chimeric sequences SEQ ID NOs: 9-12 and 23-32 (see
below), L-IB1 sequences SEQ ID NOs: 33 to 66 and D-IB1 sequences SEQ ID NOs: 67 to
100.
TABLE 1
| SEQUENCE/PEPTIDE NAME |
SEQ ID NO |
AA |
SEQUENCE |
| L-IBl(s) |
1 |
19 |
RPKRPTTLNLFPQVPRSQD (NH2-RPKRPTTLNLFPQVPRSQD-COOH) |
| D-IBi(s) |
2 |
19 |
DQSRPVQPFLNLTTPRKPR (NH2-DQSRPVQPFLNLTTPRKPR-COOH) |
| L-IB (generic) (s) |
3 |
19 |
NH2-Xnb-Xna-RPTTLXLXXXXXXXQD-Xnb-COOH |
| D-IB (generic) (s) |
4 |
19 |
NH2-Xnb-DQXXXXXXXLXLTTPR-Xna-Xnb-COOH |
| L-TAT |
5 |
10 |
GRKKRRQRRR (NH2-GRKKRRQRRR-COOH) |
| D-TAT |
6 |
10 |
RRRQRRKKRG (NH2-RRRQRRKKRG-COOH) |
| L-generic-TAT (s) |
7 |
11 |
NH2-Xnb-RKKRRQRRR-Xnb-COOH |
| D-generic-TAT (s) |
8 |
11 |
NH2-Xnb-RRRQRRKKR-Xnb-COOH |
| L-TAT-IB1(s) |
9 |
31 |
GRKKRRQRRRPPRPKRPTTLNLFPQVPRSQD (NH2-GRKKRRQRRRPPRPKRPTTLNLFPQVPRSQD-COOH) |
| L-TAT-IB (generic) (s) |
10 |
29 |
NH2-Xnb-RKKRRQRRR-Xnb-xna-RPTTLXLXXXXXXXQD-Xnb-COOH |
| D-TAT-IB1(s) |
11 |
31 |
DQSRPVQPFLNLTTPRKPRPPRRRQRRKKRG (NH2-DQSRPVQPFLNLTTPRKPRPPRRRQRRKKRG-COOH) |
| D-TAT-IB (generic) (s) |
12 |
29 |
NH2-Xnb-DQXXXXXXXLXLTTPR-Xna-Xnb-RRRQRRKKR-Xnb-COOH |
| IB1-long |
13 |
29 |
PGTGCGDTYRPKRPTTLNLFPQVPRSQDT (NH2- PGTGCGDTYRPKRPTTLNLFPQVPRSQDT -COOH) |
| IB2-long |
14 |
27 |
IPSPSVEEPHKHRPTTLRLTTLGAQDS (NH2- IPSPSVEEPHKHRPTTLRLTTLGAQDS -COOH) |
| c-Jun |
15 |
29 |
GAYGYSNPKILKQSMTLNLADPVGNLKPH (NH2- GAYGYSNPKILKQSMTLNLADPVGNLKPH -COOH) |
| ATF2 |
16 |
29 |
TNEDHLAVHKHKHEMTLKFGPARNDSVIV (NH2- TNEDHLAVHKHKHEMTLKFGPARNDSVIV -COOH) |
| L-IB1 |
17 |
23 |
DTYRPKRPTTLNLFPQVPRSQDT (NH2- DTYRPKRPTTLNLFPQVPRSQDT -COOH) |
| D-IB 1 |
18 |
23 |
TDQSRPVQPFLNLTTPRKPRYTD (NH2- TDQSRPVQPFLNLTTPRKPRYTD -COOH) |
| L-IB (generic) |
19 |
19 |
XRPTTXLXXXXXXXQDS/TX (NH2- XRPTTLXLXXXXXXXQDS/TX -COOH) |
| D-IB (generic) |
20 |
19 |
XS/TDQXXXXXXXLXLTTPRX (NH2- XS/TDQXXXXXXXLXLTTPRX -COOH) |
| L-generic-TAT |
21 |
17 |
XXXXRKKRRQRRRXXXX (NH2- XXXXRKKRRQRRRXXXX -COOH) |
| D-generic-TAT |
22 |
17 |
XXXXRRRQRRKKRXXXX (NH2- XXXXRRRQRRKKRXXXX -COOH) |
| L-TAT-IB 1 |
23 |
35 |
GRKKRRQRRRPPDTYRPKRPTTLNLFPQVPRSQDT (NH2- GRKKRRQRRRPPDTYRPKRPTTLNLFPQVPRSQDT -COOH) |
| L-TAT-IB (generic) |
24 |
42 |
XXXXXXXRKKRRQRRRXXXXXXXXRPTTLXLXXXXXXXODS/TX (NH2-XXXXXXXRKKRRQRRRXXXXXXXXRPTTLXLXXXXXXXQDS/TX -COOH) |
| D-TAT-IB 1 |
25 |
35 |
TDQSRPVQPFLNLTTPRKPRYTDPPRRRQRRKKRG (NH2- TDQSRPVQPFLNLTTPRKPRYTDPPRRRQRRKKRG -COOH) |
| D-TAT-IB (generic) |
26 |
42 |
XT/SDQXXXXXXXLXLTTPRXXXXXXXXRRRQRRKKRXXXXXXX (NH2-XT/SDQXXXXXXXLXLTTPRXXXXXXXXRRRQRRKKRXXXXXXX -COOH) |
| L-TAT-IB1(s1) |
27 |
30 |
RKKRRQRRRPPRPKRPTTLNLFPQVPRSQD (NH2-RKKRRQRRRPPRPKRPTTLNLFPQVPRSQD-COOH) |
| L-TAT-IB1(s2) |
28 |
30 |
GRKKRRQRRRXncRPKRPTTLNLFPQVPRSQD (NH2-GRKKRRQRRRXncRPKRPTTLNLFPQVPRSQD-COOH) |
| L-TAT-IB1(s3) |
29 |
29 |
RKKRRQRRRXncRPKRPTTLNLFPQVPRSQD |
| |
|
|
(NH2-RKKRRQRRRXncRPKRPTTLNLFPQVPRSQD-COOH) |
| D-TAT-IB1(S1) |
30 |
30 |
DQSRPVQPFLNLTTPRKPRPPRRRQRRKKR (NH2-DQSRPVQPFLNLTTPRKPRPPRRRQRRKKR-COOH) |
| D-TAT-IB1(s2) |
31 |
30 |
DQSRPVQPFLNLTTPRKPRXncRRRQRRKKRG (NH2-DQSRPVQPFLNLTTPRKPRXncRRRQRRKKRG-COOH) |
| D-TAT-IB1(s3) |
32 |
29 |
DQSRPVQPFLNLTTPRKPRXncRRRQRRKKR (NH2-DQSRPVQPFLNLTTPRKPRXncRRRQRRKKR-COOH) |
| L-IB1(s1) |
33 |
13 |
TLNLFPQVPRSQD (NH2-TLNLFPQVPRSQD-COOH) |
| L-IB1(s2) |
34 |
13 |
TTLNLFPQVPRSQ (NH2-TTLNLFPQVPRSQ-COOH) |
| L-IB1(s3) |
35 |
13 |
PTTLNLFPQVPRS (NH2-PTTLNLFPQVPRS-COOH) |
| L-IB1(s4) |
36 |
13 |
RPTTLNLFPQVPR (NH2-RPTTLNLFPQVPR-COOH) |
| L-IB1(s5) |
37 |
13 |
KRPTTLNLFPQVP (NH2-KRPTTLNLFPQVP-COOH) |
| L-IB1(s6) |
38 |
13 |
PKRPTTLNLFPQV (NH2-PKRPTTLNLFPQV-COOH) |
| L-IB1(s7) |
39 |
13 |
RPKRPTTLNLFPQ (NH2-RPKRPTTLNLFPQ-COOH) |
| L-IB1(s8) |
40 |
12 |
LNLFPQVPRSQD (NH2-LNLFPQVPRSQD-COOH) |
| L-IB1(s9) |
41 |
12 |
TLNLFPQVPRSQ (NH2-TLNLFPQVPRSQ-COOH) |
| L-IB1(s10) |
42 |
12 |
TTLNLFPQVPRS (NH2-TTLNLFPQVPRS-COOH) |
| L-IB1(s11) |
43 |
12 |
PTTLNLFPQVPR (NH2-PTTLNLFPQVPR-COOH) |
| L-IB1(s12) |
44 |
12 |
RPTTLNLFPQVP (NH2-RPTTLNLFPQVP-COOH) |
| L-IB1(s13) |
45 |
12 |
KRPTTLNLFPQV (NH2-KRPTTLNLFPQV-COOH) |
| L-IB1(s14) |
46 |
12 |
PKRPTTLNLFPQ (NH2-PKRPTTLNLFPQ-COOH) |
| L-IB1(s15) |
47 |
12 |
RPKRPTTLNLFP (NH2-RPKRPTTLNLFP-COOH) |
| L-IB1(s16) |
48 |
11 |
NLFPQVPRSQD (NH2-NLFPQVPRSQD-COOH) |
| L-IB1(s17) |
49 |
11 |
LNLFPQVPRSQ (NH2-LNLFPQVPRSQ-COOH) |
| L-IB1(s18) |
50 |
11 |
TLNLFPQVPRS (NH2-TLNLFPQVPRS-COOH) |
| L-IB1(s19) |
51 |
11 |
TTLNLFPQVPR (NH2-TTLNLFPQVPR-COOH) |
| L-IB1(s20) |
52 |
11 |
PTTLNLFPQVP (NH2-PTTLNLFPQVP-COOH) |
| L-IB1(s21) |
53 |
11 |
RPTTLNLFPQV (NH2-RPTTLNLFPQV-COOH) |
| L-IB1(s22) |
54 |
11 |
KRPTTLNLFPQ (NH2-KRPTTLNLFPQ-COOH) |
| L-IBi(s23) |
55 |
11 |
PKRPTTLNLFP (NH2-PKRPTTLNLFP-COOH) |
| L-1B1(s24) |
56 |
11 |
RPKRPTTLNLF (NH2-RPKRPTTLNLF-COOH) |
| L-IB1(s25) |
57 |
10 |
LFPQVPRSQD (NH2-LFPQVPRSQD-COOH) |
| L-IB1(s26) |
58 |
10 |
NLFPQVPRSQ (NH2-NLFPQVPRSQ-COOH) |
| L-IB1(s27) |
59 |
10 |
LNLFPQVPRS (NH2-LNLFPQVPRS-COOH) |
| L-IB1(s28) |
60 |
10 |
TLNLFPQVPR (NH2-TLNLFPQVPR-COOH) |
| L-IB1(s29) |
61 |
10 |
TTLNLFPQVP (NH2-TTLNLFPQVP-COOH) |
| L-IB1(s30) |
62 |
10 |
PTTLNLFPQV (NH2-PTTLNLFPQV-COOH) |
| L-IB1(s31) |
63 |
10 |
RPTTLNLFPQ (NH2-RPTTLNLFPQ-COOH) |
| L-IB1(s32) |
64 |
10 |
KRPTTLNLFP (NH2-KRPTTLNLFP-COOH) |
| L-IB1(s33) |
65 |
10 |
PKRPTTLNLF (NH2-PKRPTTLNLF-COOH) |
| L-IB1(s34) |
66 |
10 |
RPKRPTTLNL (NH2-RPKRPTTLNL-COOH) |
| D-IB1(s1) |
67 |
13 |
QPFLNLTTPRKPR (NH2-QPFLNLTTPRKPR-COOH) |
| D-IB1(s2) |
68 |
13 |
VQPFLNLTTPRKP (NH2-VQPFLNLTTPRKP-COOH) |
| D-IB1(s3) |
69 |
13 |
PVQPFLNLTTPRK (NH2-PVQPFLNLTTPRK-COOH) |
| D-IB1(s4) |
70 |
13 |
RPVQPFLNLTTPR (NH2-RPVQPFLNLTTPR-COOH) |
| D-IB1(s5) |
71 |
13 |
SRPVQPFLNLTTP (NH2-SRPVQPFLNLTTP-COOH) |
| D-IB1(s6) |
72 |
13 |
QSRPVQPFLNLTT (NH2-QSRPVQPFLNLTT-COOH) |
| D-IB1(s7) |
73 |
13 |
DQSRPVQPFLNLT (NH2-DQSRPVQPFLNLT-COOH) |
| D-IB1(s8) |
74 |
12 |
PFLNLTTPRKPR (NH2-PFLNLTTPRKPR-COOH) |
| D-IB1(s9) |
75 |
12 |
QPFLNLTTPRKP (NH2-QPFLNLTTPRKP-COOH) |
| D-IB1(s10) |
76 |
12 |
VQPFLNLTTPRK (NH2-VQPFLNLTTPRK-COOH) |
| D-IB1(s11) |
77 |
12 |
PVQPFLNLTTPR (NH2-PVQPFLNLTTPR-COOH) |
| D-IB1(s12) |
78 |
12 |
RPVQPFLNLTTP (NH2-RPVQPFLNLTTP-COOH) |
| D-IB1(s13) |
79 |
12 |
SRPVQPFLNLTT (NH2-SRPVQPFLNLTT-COOH) |
| D-IB1(s14) |
80 |
12 |
QSRPVQPFLNLT (NH2-QSRPVQPFLNLT-COOH) |
| D-IB1(s15) |
81 |
12 |
DQSRPVQPFLNL (NH2-DQSRPVQPFLNL-COOH) |
| D-IB1(s16) |
82 |
11 |
FLNLTTPRKPR (NH2-FLNLTTPRKPR-COOH) |
| D-IB1(s17) |
83 |
11 |
PFLNLTTPRKP (NH2-PFLNLTTPRKP-COOH) |
| D-IB1(s18) |
84 |
11 |
QPFLNLTTPRK (NH2-QPFLNLTTPRK-COOH) |
| D-IB1(s19) |
85 |
11 |
VQPFLNLTTPR (NH2-VQPFLNLTTPR-COOH) |
| D-IB1(s20) |
86 |
11 |
PVQPFLNLTTP (NH2-PVQPFLNLTTP-COOH) |
| D-IB1(s21) |
87 |
11 |
RPVQPFLNLTT (NH2-RPVQPFLNLTT-COOH) |
| D-IB1(s22) |
88 |
11 |
SRPVQPFLNLT (NH2-SRPVQPFLNLT-COOH) |
| D-IB1(s23) |
89 |
11 |
QSRPVQPFLNL (NH2-QSRPVQPFLNL-COOH) |
| D-IB1(s24) |
90 |
11 |
DQSRPVQPFLN (NH2-DQSRPVQPFLN-COOH) |
| D-IB1(s25) |
91 |
10 |
DQSRPVQPFL (NH2-DQSRPVQPFL-COOH) |
| D-IB1(s26) |
92 |
10 |
QSRPVQPFLN (NH2-QSRPVQPFLN-COOH) |
| D-IB1(s27) |
93 |
10 |
SRPVQPFLNL (NH2-SRPVQPFLNL-COOH) |
| D-IB1(s28) |
94 |
10 |
RPVQPFLNLT (NH2-RPVQPFLNLT-COOH) |
| D-IB1(s29) |
95 |
10 |
PVQPFLNLTT (NH2-PVQPFLNLTT-COOH) |
| D-IBi(s30) |
96 |
10 |
VQPFLNLTTP (NH2-VQPFLNLTTP-COOH) |
| D-IB1(s31) |
97 |
10 |
QPFLNLTTPR (NH2-QPFLNLTTPR-COOH) |
| D-IB1(s32) |
98 |
10 |
PFLNLTTPRK (NH2-PFLNLTTPRK-COOH) |
| D-IB1(s33) |
99 |
10 |
FLNLTTPRKP (NH2-FLNLTTPRKP-COOH) |
| D-IB1(s34) |
100 |
10 |
LNLTTPRKPR (NH2-LNLTTPRKPR-COOH) |
[0021] In the above context, an amino acid sequence having a sequence "sharing a sequence
identity" of at least, for example, 95% to a query amino acid sequence of the present
invention, is intended to mean that the sequence of the subject amino acid sequence
is identical to the query sequence except that the subject amino acid sequence may
include up to five amino acid alterations per each 100 amino acids of the query amino
acid sequence. In other words, to obtain an amino acid sequence having a sequence
of at least 95% identity to a query amino acid sequence, up to 5% (5 of 100) of the
amino acid residues in the subject sequence may be inserted or substituted with another
amino acid or deleted.
[0022] For sequences without exact correspondence, a "% identity" of a first sequence may
be determined with respect to a second sequence. In general, these two sequences to
be compared are aligned to give a maximum correlation between the sequences. This
may include inserting "gaps" in either one or both sequences, to enhance the degree
of alignment. A % identity may then be determined over the whole length of each of
the sequences being compared (so-called global alignment), that is particularly suitable
for sequences of the same or similar length, or over shorter, defined lengths (so-called
local alignment), that is more suitable for sequences of unequal length.
[0023] Methods for comparing the identity and homology of two or more sequences, particularly
as described herein, are well known in the art. Thus for instance, programs available
in the Wisconsin Sequence Analysis Package, version 9.1 (
Devereux et al., 1984, Nucleic Acids Res. 12, 387-395.), for example the programs BESTFIT and GAP, may be used to determine the % identity
between two polynucleotides and the % identity and the % homology between two polypeptide
sequences. BESTFIT uses the "local homology" algorithm of (
Smith and Waterman (1981), J. Mol. Biol. 147, 195-197.) and finds the best single region of similarity between two sequences. Other programs
for determining identity and/or similarity between sequences are also known in the
art, for instance the BLAST family of programs (
Altschul et al., 1990, J. Mol. Biol. 215, 403-410), accessible through the home page of the NCBI at world wide web site ncbi.nlm.nih.gov)
and FASTA (
Pearson (1990), Methods Enzymol. 183, 63-98;
Pearson and Lipman (1988), Proc. Natl. Acad. Sci. U. S. A 85, 2444-2448.).
[0024] JNK-inhibitor sequences as used according to the present invention and as defined
above may be obtained or produced by methods well-known in the art, e.g. by chemical
synthesis or by genetic engineering methods as discussed below. For example, a peptide
corresponding to a portion of an JNK inhibitor sequence as used herein including a
desired region of said JNK inhibitor sequence, or that mediates the desired activity
in vitro or
in vivo, may be synthesized by use of a peptide synthesizer.
[0025] JNK inhibitor sequence as used herein and as defined above, may be furthermore be
modified by a trafficking sequence, allowing the JNK inhibitor sequence as used herein
and as defined above to be transported effectively into the cells. Such modified JNK
inhibitor sequence are preferably provided and used as chimeric sequences.
[0026] The present invention therefore provides a chimeric peptide including at least one
first domain and at least one second domain, for use in the treatment of diseases
or disorders strongly related to JNK signaling as defined above in a subject, wherein
the first domain of the chimeric peptide comprises a trafficking sequence, while the
second domain of the chimeric peptide comprises an JNK inhibitor sequence according
to SEQ ID NO: 2.
[0027] As a first domain the chimeric peptide as used herein comprises a trafficking sequence,
which is typically selected from any sequence of amino acids that directs a peptide
(in which it is present) to a desired cellular destination. Thus, the trafficking
sequence, as used herein, typically directs the peptide across the plasma membrane,
e.g. from outside the cell, through the plasma membrane, and into the cytoplasm. Alternatively,
or in addition, the trafficking sequence may direct the peptide to a desired location
within the cell, e.g. the nucleus, the ribosome, the endoplasmic reticulum (ER), a
lysosome, or peroxisome, by e.g. combining two components (e.g. a component for cell
permeability and a component for nuclear location) or by one single component having
e.g. properties of cell membrane transport and targeted e.g. intranuclear transport.
The trafficking sequence may additionally comprise another component, which is capable
of binding a cytoplasmic component or any other component or compartment of the cell
(e.g. endoplasmic reticulum, mitochondria, gloom apparatus, lysosomal vesicles). Accordingly,
e.g. the trafficking sequence of the first domain and the JNK inhibitor sequence of
the second domain may be localized in the cytoplasm or any other compartment of the
cell. This allows to determine localization of the chimeric peptide in the cell upon
uptake.
[0028] The trafficking sequence of the chimeric peptide as used herein may be exclusively
composed of D-amino acids. More preferably, the trafficking sequence of the chimeric
peptide as used herein may comprise a D retro-inverso peptide of the sequences as
presented above.
[0030] Sources for the trafficking sequence of the first domain may be employed including,
e.g. native proteins such as e.g. the TAT protein (e.g. as described in
U.S. Patent Nos. 5,804,604 and
5,674,980, each of these references being incorporated herein by reference), VP22 (described
in e.g.
WO 97/05265;
Elliott and O'Hare, Cell 88 : 223-233 (1997)), non-viral proteins (
Jackson et al, Proc. Natl. Acad. Sci. USA 89 : 10691-10695 (1992)), trafficking sequences derived from Antennapedia (e.g. the antennapedia carrier
sequence) or from basic peptides, e.g. peptides having a length of 5 to 15 amino acids,
preferably 10 to 12 amino acids and comprising at least 80 %, more preferably 85 %
or even 90 % basic amino acids, such as e.g. arginine, lysine and/or histidine. Furthermore,
variants, fragments and derivatives of one of the native proteins used as trafficking
sequences are disclosed herewith. With regard to variants, fragments and derivatives
it is referred to the definition given above for JNK inhibitor sequences as described
herein. Variants, fragments as well as derivatives are correspondingly defined as
set forth above for JNK inhibitor sequences as described herein. Particularly, in
the context of the trafficking sequence, a variant or fragment or derivative may be
defined as a sequence sharing a sequence identity with one of the native proteins
used as trafficking sequences as defined above of at least about 30%, 50%, 70%, 80%,
90%, 95%, 98%, or even 99%.
[0031] In a chimeric peptide as described herein, the trafficking sequence of the first
domain comprises or consists of a sequence derived from the human immunodeficiency
virus (HIV)1 TAT protein, particularly some or all of the 86 amino acids that make
up the TAT protein.
[0032] For a trafficking sequence (being included in the first domain of the chimeric peptide
as used herein), partial sequences of the full-length TAT protein may be used forming
a functionally effective fragment of a TAT protein, i.e. a TAT peptide that includes
the region that mediates entry and uptake into cells. As to whether such a sequence
is a functionally effective fragment of the TAT protein can be determined using known
techniques (see e.g.
Franked et al., Proc. Natl. Acad. Sci, USA 86 : 7397-7401 (1989)). Thus, the trafficking sequence in the first domain of the chimeric peptide as
used herein may be derived from a functionally effective fragment or portion of a
TAT protein sequence that comprises less than 86 amino acids, and which exhibits uptake
into cells, and optionally the uptake into the cell nucleus. More preferably, partial
sequences (fragments) of TAT to be used as carrier to mediate permeation of the chimeric
peptide across the cell membrane, are intended to comprise the basic region (amino
acids 48 to 57 or 49 to 57) of full-length TAT.
[0033] The trafficking sequence as used herein comprises the D retro-inverso sequence NH
2-RRRQRRKKRG-COOH (D-TAT) [SEQ ID NO: 6].
[0034] As a second domain the chimeric peptide as described herein typically comprises an
JNK inhibitor sequence, selected from any of the JNK inhibitor sequences as defined
above, including variants, fragments and/or derivatives of these JNK inhibitor sequences.
[0035] Both domains, i.e. the first and the second domain(s), of the chimeric peptide as
used herein, may be linked such as to form a functional unit. Any method for linking
the first and second domain(s) as generally known in the art may be applied.
[0036] The first and the second domain(s) of the chimeric peptide as used herein are linked
by a covalent bond. A covalent bond, as defined herein, may be e.g. a peptide bond,
which may be obtained by expressing the chimeric peptide as defined above as a fusion
protein. Fusion proteins, as described herein, can be formed and used in ways analogous
to or readily adaptable from standard recombinant DNA techniques, as described below.
However, both domains may also be linked via side chains or may be linked by a chemical
linker moiety.
[0037] The first and second domain(s) may be linked with each other via a linker sequence
comprising 1 to 10, preferably 1 to 5 amino acids. Amino acids forming the linker
sequence are preferably selected from glycine or proline as amino acid residues. More
preferably, the first and second domain(s) may be separated by each other by a hinge
of two, three or more proline residues between the first and second domain(s).
[0038] The chimeric peptide as used herein consists of D-amino acid chimeric peptides according
to the TAT-IB1 peptide NH
2-DQSRPVQPFLNLTTPRKPRPPRRRQRRKKRG-COOH (D-TAT-IB1(s)) [SEQ ID NO: 11].
[0039] The first and second domain(s) of the chimeric peptide as defined above may be linked
to each other by chemical or biochemical coupling carried out in any suitable manner
known in the art, e.g. by establishing a peptide bond between the first and the second
domain(s) e.g. by expressing the first and second domain(s) as a fusion protein, or
e.g. by crosslinking the first and second domain(s) of the chimeric peptide as defined
above.
[0040] Many known methods suitable for chemical crosslinking of the first and second domain(s)
of the chimeric peptide as defined above are non-specific, i.e. they do not direct
the point of coupling to any particular site on the transport polypeptide or cargo
macromolecule. As a result, use of non-specific crosslinking agents may attack functional
sites or sterically block active sites, rendering the conjugated proteins biologically
inactive. Thus, preferably such crosslinking methods are used, which allow a more
specific coupling of the first and second domain(s).
[0041] In this context, one way to increasing coupling specificity is a direct chemical
coupling to a functional group present only once or a few times in one or both of
the first and second domain(s) to be crosslinked. For example, cysteine, which is
the only protein amino acid containing a thiol group, occurs in many proteins only
a few times. Also, for example, if a polypeptide contains no lysine residues, a crosslinking
reagent specific for primary amines will be selective for the amino terminus of that
polypeptide. Successful utilization of this approach to increase coupling specificity
requires that the polypeptide have the suitably rare and reactive residues in areas
of the molecule that may be altered without loss of the molecule's biological activity.
Cysteine residues may be replaced when they occur in parts of a polypeptide sequence
where their participation in a crosslinking reaction would otherwise likely interfere
with biological activity.
[0042] When a cysteine residue is replaced, it is typically desirable to minimize resulting
changes in polypeptide folding. Changes in polypeptide folding are minimized when
the replacement is chemically and sterically similar to cysteine. For these reasons,
serine is preferred as a replacement for cysteine. As demonstrated in the examples
below, a cysteine residue may be introduced into a polypeptide's amino acid sequence
for crosslinking purposes. When a cysteine residue is introduced, introduction at
or near the amino or carboxy terminus is preferred. Conventional methods are available
for such amino acid sequence modifications, wherein the polypeptide of interest is
produced by chemical synthesis or via expression of recombinant DNA.
[0043] Coupling of the first and second domain(s) of the chimeric peptide as defined above
and used herein can also be accomplished via a coupling or conjugating agent. There
are several intermolecular crosslinking reagents which can be utilized (see for example,
Means and Feeney, CHEMICAL MODIFICATION OF PROTEINS, Holden-Day, 1974, pp. 39-43). Among these reagents are, for example, N-succinimidyl 3-(2-pyridyldithio) propionate
(SPDP) or N,N'-(1,3-phenylene) bismaleimide (both of which are highly specific for
sulfhydryl groups and form irreversible linkages); N, N'-ethylene-bis-(iodoacetamide)
or other such reagent having 6 to 11 carbon methylene bridges (which are relatively
specific for sulfhydryl groups); and 1,5-difluoro-2,4-dinitrobenzene (which forms
irreversible linkages with amino and tyrosine groups). Other crosslinking reagents
useful for this purpose include: p,p'-difluoro-m, m'-dinitrodiphenylsulfone which
forms irreversible crosslinkages with amino and phenolic groups); dimethyl adipimidate
(which is specific for amino groups); phenol-1,4 disulfonylchloride (which reacts
principally with amino groups); hexamethylenediisocyanate or diisothiocyanate, or
azophenyl-p-diisocyanate (which reacts principally with amino groups); glutaraldehyde
(which reacts with several different side chains) and disdiazobenzidine (which reacts
primarily with tyrosine and histidine).
[0044] Crosslinking reagents used for crosslinking the first and second domain(s) of the
chimeric peptide as defined above may be homobifunctional, i.e. having two functional
groups that undergo the same reaction. A preferred homobifunctional crosslinking reagent
is bismaleimidohexane ("BMH"). BMH contains two maleimide functional groups, which
react specifically with sulfhydryl-containing compounds under mild conditions (pH
6.5-7.7). The two maleimide groups are connected by a hydrocarbon chain. Therefore,
BMH is useful for irreversible crosslinking of polypeptides that contain cysteine
residues.
[0045] Crosslinking reagents used for crosslinking the first and second domain(s) of the
chimeric peptide as defined above may also be heterobifunctional. Heterobifunctional
crosslinking agents have two different functional groups, for example an amine-reactive
group and a thiol-reactive group, that will crosslink two proteins having free amines
and thiols, respectively. Examples of heterobifunctional crosslinking agents are succinimidyl
4-(N-maleimidomethyl)cyclohexane-1-carboxylate ("SMCC"), m-maleimidobenzoyl-N-hydroxysuccinimide
ester ("MBS"), and succinimide 4-(p-maleimidophenyl)butyrate ("SMPB"), an extended
chain analog of MBS. The succinimidyl group of these crosslinkers reacts with a primary
amine, and the thiol-reactive maleimide forms a covalent bond with the thiol of a
cysteine residue.
[0046] Crosslinking reagents suitable for crosslinking the first and second domain(s) of
the chimeric peptide as defined above often have low solubility in water. A hydrophilic
moiety, such as a sulfonate group, may thus be added to the crosslinking reagent to
improve its water solubility. In this respect, Sulfo-MBS and Sulfo-SMCC are examples
of crosslinking reagents modified for water solubility, which may be used according
to the present invention.
[0047] Likewise, many crosslinking reagents yield a conjugate that is essentially non-cleavable
under cellular conditions. However, some crosslinking reagents particularly suitable
for crosslinking the first and second domain(s) of the chimeric peptide as defined
above contain a covalent bond, such as a disulfide, that is cleavable under cellular
conditions. For example, Traut's reagent, dithiobis(succinimidylpropionate) ("DSP"),
and N-succinimidyl 3-(2-pyridyldithio)propionate ("SPDP") are well-known cleavable
crosslinkers. The use of a cleavable crosslinking reagent permits the cargo moiety
to separate from the transport polypeptide after delivery into the target cell. Direct
disulfide linkage may also be useful.
[0049] Chemical crosslinking of the first and second domain(s) of the chimeric peptide as
defined above may include the use of spacer arms. Spacer arms provide intramolecular
flexibility or adjust intramolecular distances between conjugated moieties and thereby
may help preserve biological activity. A spacer arm may be in the form of a polypeptide
moiety that includes spacer amino acids, e.g. proline. Alternatively, a spacer arm
may be part of the crosslinking reagent, such as in "long-chain SPDP" (Pierce Chem.
Co., Rockford, IL., cat. No. 21651 H).
[0050] Any of the peptides disclosed herein, in particular the JNK inhibitor, the trafficking
sequence and the chimeric peptide as disclosed herein, preferably the JNK inhibitor
according to SEQ ID NO: 11, may have a modification at one or both of their termini,
i.e. either at the C- or at the N-terminus or at both. The C-Terminus may preferably
be modified by an amide modification, whereas the N-terminus may be modified by any
suitable NH2-protection group, such as e.g. acylation. More preferably, the JNK inhibitor
and the chimeric peptide as disclosed herein, preferably the JNK inhibitor according
to SEQ ID NO: 11, is modified by an amide modification at the C-terminus.
[0051] Any of the peptides disclosed herein, in particular the JNK inhibitor, the trafficking
sequence (e.g. of the chimeric peptide) and the chimeric peptide as disclosed herein,
preferably the JNK inhibitor according to SEQ ID NO: 11, may be deleted at their N-
and/or C-terminus by 1, 2 or 3 amino acids. For example, in a chimeric peptide each
domain, i.e. the JNK-inhibitor and the trafficking sequence domain, may be deleted
at their N- and/or C-terminus by 1, 2 or 3 amino acids and/or the chimeric peptide
may be deleted at its N- and/or C-terminus by 1, 2 or 3 amino acids. Again, the shorter
the peptides are, the less their (unspecific) cell toxicity. However, the peptides
must retain their biological function, i.e. their cell membrane permeability (first
domain) and their JNK inhibitory function (second domain).
[0052] Furthermore, variants, fragments or derivatives of one of the above disclosed chimeric
peptides are described herein. With regard to fragments and variants it is generally
referred to the definition given above for JNK inhibitor sequences.
[0053] Particularly, a "variant of a chimeric peptide" is preferably a sequence derived
from any of the sequences according to SEQ ID NOs: 9 to 12 and 23 to 32, wherein the
chimeric variant comprises amino acid alterations of the chimeric peptides according
to SEQ ID NOs: 9 to 12 and 23 to 32 as used herein. Such alterations typically comprise
1 to 20, preferably 1 to 10 and more preferably 1 to 5 substitutions, additions and/or
deletions (leading to fragments) of amino acids according to SEQ ID NOs: 9 to 12 and
23 to 32, wherein the altered chimeric peptide as described herein exhibits a sequence
identity with any of the sequences according to SEQ ID NOs: 9-12 and 23 to 32 of at
least about 30%, 50%, 70%, 80%, or 95%, 98%, or even 99%. Preferably, these variants
retain the biological activity of the first and the second domain as contained in
the chimeric peptide, i.e. the trafficking activity of the first domain as disclosed
above and the activity of the second domain for binding JNK and/or inhibiting the
activation of at least one JNK activated transcription factor.
[0054] Thus, in the context of the present invention, a "fragment of the chimeric peptide"
is preferably a sequence derived any of the sequences according to SEQ ID NOs: 9 to
12 and 23 to 32, wherein the fragment comprises at least 4 contiguous amino acids
of any of SEQ ID NOs: 9 to 12 and 23 to 32. This fragment preferably comprises a length
which is sufficient to allow specific recognition of an epitope from any of these
sequences and to transport the sequence into the cells, the nucleus or a further preferred
location. Even more preferably, the fragment comprises 4 to 18, 4 to 15, or most preferably
4 to 10 contiguous amino acids of any of SEQ ID NOs: 9 to 12 and 23 to 32. Fragments
of the chimeric peptide as described herein further may be defined as a sequence sharing
a sequence identity with any of the sequences according to any of SEQ ID NOs: 9 to
12 and 23 to 32 of at least about 30%, 50%, 70%, 80%, or 95%, 98%, or even 99%.
[0055] The chimeric peptides as defined according to the invention can be formulated in
a pharmaceutical composition, which may be applied in the prevention or treatment
of any of the diseases as defined herein, particularly in the prevention or treatment
of diseases or disorders strongly related to JNK signaling as defined herein. Such
a pharmaceutical composition used according to the present invention includes as an
active component (i) chimeric peptides according to SEQ ID NO: 11 according to the
invention.
[0056] According to a preferred embodiment, such a pharmaceutical composition according
to the present invention typically comprises a safe and effective amount of a component
according to the invention, of at least one chimeric peptide according to SEQ ID NO:
11. A pharmaceutical composition according to the present invention comprises as an
active component a chimeric peptide consisting of the sequence according to SEQ ID
NO: 11.
[0057] In addition, the pharmaceutical composition as used according to the present invention
may additionally - i.e. in addition to any one or more of the chimeric peptides according
to the invention- also comprise optionally a further "active component", which is
also useful in the respective disease. In this context, the pharmaceutical composition
according to the present invention may also combined in the therapy of the diseases
according to the present invention with a further pharmaceutical composition comprising
a further "active component". In the case of a combination therapy, separate pharmaceutical
compositions for the active components to be combined are preferred for better individual
dosing, however for convenience also a single pharmaceutical composition comprising
the active components to be combined is conceivable. In the case of separate pharmaceutical
compositions for the active components to be combined the administration of the JNK
inhibitor according to the present invention may be before, during (concomitant or
overlapping administration) or after the administration of the other active component
comprised in a separate pharmaceutical composition. Administration "before" the administration
of the JNK inhibitor preferably means within 24 h, more preferably within 12 h, even
more preferably within 3 h, particularly preferably within 1 h and most preferably
within 30 min before the administration of the JNK inhibitor starts. Administration
"after" the administration of the JNK inhibitor preferably means within 24 h, more
preferably within 12 h, even more preferably within 3 h, particularly preferably within
1 h and most preferably within 30 min after the administration of the JNK inhibitor
is finished.
[0058] The inventors of the present invention additionally found, that the the chimeric
peptide, as defined herein, exhibit a particular well uptake rate into cells involved
in the diseases of the present invention. Therefore, the amount of a chimeric peptide,
in the pharmaceutical composition to be administered to a subject, may -without being
limited thereto - have a very low dose. Thus, the dose may be much lower than for
peptide drugs known in the art, such as DTS-108 (
Florence Meyer-Losic et al., Clin Cancer Res., 2008, 2145-53). This has several positive aspects, for example a reduction of potential side reactions
and a reduction in costs.
[0059] Preferably, the dose (per kg bodyweight) is in the range of up to 10 mmol/kg, preferably
up to 1 mmol/kg, more preferably up to 100 µmοl/kg, even more preferably up to 10
µmοl/kg, even more preferably up to 1 µmοl/kg, even more preferably up to 100 nmol/kg,
most preferably up to 50 nmol/kg.
[0060] Thus, the dose range may preferably be from about 0,01 pmol/kg to about 1 mmol/kg,
from about 0,1 pmol/kg to about 0,1 mmol/kg, from about 1,0 pmol/kg to about 0,01
mmol/kg, from about 10 pmol/kg to about 1 µmol/kg, from about 50 pmol/kg to about
500 nmol/kg, from about 100 pmol/kg to about 300 nmol/kg, from about 200 pmol/kg to
about 100 nmol/kg, from about 300 pmol/kg to about 50 nmol/kg, from about 500 pmol/kg
to about 30 nmol/kg, from about 250 pmol/kg to about 5 nmol/kg, from about 750 pmol/kg
to about 10 nmol/kg, from about 1 nmol/kg to about 50 nmol/kg, or a combination of
any two of said values.
[0061] In this context, prescription of treatment, e.g. decisions on dosage etc. when using
the above pharmaceutical composition is typically within the responsibility of general
practitioners and other medical doctors, and typically takes account of the disorder
to be treated, the condition of the individual patient, the site of delivery, the
method of administration and other factors known to practitioners. Examples of the
techniques and protocols mentioned above can be found in
REMINGTON'S PHARMACEUTICAL SCIENCES, 16th edition, Osol, A. (ed), 1980. Accordingly, a "safe and effective amount" as defined above for components of the
pharmaceutical compositions as used according to the present invention means an amount
of each or all of these components, that is sufficient to significantly induce a positive
modification of diseases or disorders strongly related to JNK signaling as defined
herein. At the same time, however, a "safe and effective amount" is small enough to
avoid serious side-effects, that is to say to permit a sensible relationship between
advantage and risk. The determination of these limits typically lies within the scope
of sensible medical judgment. A "safe and effective amount" of such a component will
vary in connection with the particular condition to be treated and also with the age
and physical condition of the patient to be treated, the severity of the condition,
the duration of the treatment, the nature of the accompanying therapy, of the particular
pharmaceutically acceptable carrier used, and similar factors, within the knowledge
and experience of the accompanying doctor. The pharmaceutical compositions according
to the invention can be used according to the invention for human and also for veterinary
medical purposes.
[0062] The pharmaceutical composition according to the present invention may furthermore
comprise, in addition to one of these substances, a (compatible) pharmaceutically
acceptable carrier, excipient, buffer, stabilizer or other materials well known to
those skilled in the art.
[0063] In this context, the expression "(compatible) pharmaceutically acceptable carrier"
preferably includes the liquid or non-liquid basis of the composition. The term "compatible"
means that the constituents of the pharmaceutical composition as used herein are capable
of being mixed with the pharmaceutically active component as defined above and with
one another component in such a manner that no interaction occurs which would substantially
reduce the pharmaceutical effectiveness of the composition under usual use conditions.
Pharmaceutically acceptable carriers must, of course, have sufficiently high purity
and sufficiently low toxicity to make them suitable for administration to a person
to be treated.
[0064] If the pharmaceutical composition as used herein is provided in liquid form, the
pharmaceutically acceptable carrier will typically comprise one or more (compatible)
pharmaceutically acceptable liquid carriers. The composition may comprise as (compatible)
pharmaceutically acceptable liquid carriers e.g. pyrogen-free water; isotonic saline,
i.e. a solution of 0.9 % NaCl, or buffered (aqueous) solutions, e.g. phosphate, citrate
etc. buffered solutions, vegetable oils, such as, for example, groundnut oil, cottonseed
oil, sesame oil, olive oil, corn oil and oil from theobroma; polyols, such as, for
example, polypropylene glycol, glycerol, sorbitol, mannitol and polyethylene glycol;
alginic acid, etc.. Particularly for injection and/or infusion of the pharmaceutical
composition as used herein, a buffer, preferably an aqueous buffer, and/or 0.9 % NaCl
may be used.
[0065] If the pharmaceutical composition as used herein is provided in solid form, the pharmaceutically
acceptable carrier will typically comprise one or more (compatible) pharmaceutically
acceptable solid carriers. The composition may comprise as (compatible) pharmaceutically
acceptable solid carriers e.g. one or more compatible solid or liquid fillers or diluents
or encapsulating compounds may be used as well, which are suitable for administration
to a person. Some examples of such (compatible) pharmaceutically acceptable solid
carriers are e.g. sugars, such as, for example, lactose, glucose and sucrose; starches,
such as, for example, corn starch or potato starch; cellulose and its derivatives,
such as, for example, sodium carboxymethylcellulose, ethylcellulose, cellulose acetate;
powdered tragacanth; malt; gelatin; tallow; solid glidants, such as, for example,
stearic acid, magnesium stearate; calcium sulphate, etc..
[0066] The precise nature of the (compatible) pharmaceutically acceptable carrier or other
material may depend on the route of administration. The choice of a (compatible) pharmaceutically
acceptable carrier may thus be determined in principle by the manner in which the
pharmaceutical composition as used according to the invention is administered. Various
possible routes of administration are listed in the list "Route of Administration"
of the FDA (cf. FDA: Data Standards Manual - Drug Nomenclature Monographs - Monograph
Number: C-DRG-00301; Version Number 004), which is incorporated by reference herein.
Further guidance for selecting an appropriate route of administration, in particular
for non-human animals, can be found in
Turner PV et al. (2011) Journal of the American Association for Laboratory Animal
Science, Vol. 50, No 5, p. 600 - 613, which is also incorporated by reference herein. Preferred examples for routes for
administration include parenteral routes (e.g. via injection), such as intravenous,
intramuscular, subcutaneous, intradermal, or transdermal routes, etc., enteral routes,
such as oral, or rectal routes, etc., topical routes, such as nasal, or intranasal
routes, etc., or other routes, such as epidermal routes or patch delivery. Also contemplated
(in particular for eye related diseases) are instillation, intravitreal, and subconjunctival
administration. Likewise, administration may occur intratympanical, for example, whenever
ear related diseases are treated.
[0067] The route of administration of the JNK inhibitor according to the present invention,
which is typically chosen according to the disease to be prevented and/or treated
and the respective pharmacokinetics, is intravesical administration (i.e. into the
urinary bladder), for example for diseases of the urinary system, in particular the
urinary bladder.
[0068] In general, the method of administration depends on various factors as mentioned
above, for example the selected pharmaceutical carrier and the nature of the pharmaceutical
preparation (e.g. as a liquid, tablet etc.) as well as the route of administration.
For example, the pharmaceutical composition comprising the JNK inhibitor according
to the invention may be prepared as a liquid, for example as a solution of the chimeric
peptide according to a sequence of SEQ ID NO. 11, in 0.9 % NaCl. Accordingly, for
the administration different devices may be used, e.g. a syringe (including a pre-filled
syringe); an injection device (e.g. the INJECT-EASET
™ and GENJECTT
™ device); an infusion pump (such as e.g. Accu-Chek
™); an injector pen (such as the GENPENT
™); a needleless device (e.g. MEDDECTOR
™ and BIOJECTOR
™); or an autoinjector.
[0069] The suitable amount of the pharmaceutical composition to be used can be determined
by routine experiments with animal models. Such models include, without implying any
limitation, for example rabbit, sheep, mouse, rat, gerbil, dog, pig and non-human
primate models. Preferred unit dose forms for administration include sterile solutions
of water, physiological saline or mixtures thereof. The pH of such solutions should
be adjusted to about 7.4. Suitable carriers for administration include hydrogels,
devices for controlled or delayed release, polylactic acid and collagen matrices.
[0070] For injection and/or infusion at the site of affliction, i.e. local injection/infusion,
the active ingredient will be in the form of a parenterally acceptable aqueous solution
which is pyrogen-free and has suitable pH, isotonicity and stability. Those of relevant
skill in the art are well able to prepare suitable solutions using, for example, isotonic
vehicles such as Sodium Chloride Injection, in particular 0.9 % NaCl, Ringer's Injection,
Lactated Ringer's Injection. Preservatives, stabilizers, buffers, antioxidants and/or
other additives may be included, as required. Administration is preferably in a "prophylactically
effective amount or a "therapeutically effective amount" (as the case may be), this
being sufficient to show benefit to the individual. The actual amount administered,
and rate and time-course of administration, will depend on the nature and severity
of what is being treated.
[0071] The invention concern the chimeric peptide having a sequence according to SEQ ID
NO. 11, in particular in a pharmaceutical composition as defined herein, for use in
the prevention and/or treatment of the following diseases/disorders:
- (i) diseases and/or disorders of the urinary system, i.e. cystitis in general, in
particular interstitial cystitis, Hunner's ulcer, trigonitis and/or hemorrhagic cystitis;
wherein the JNK inhibitor is applied intravesically, more preferably by intravesical
infusion, preferably at a concentration of 10 µg/ml - 1000 mg/ml, more prefarbly 50
µg/ml - 500 mg/ml, even more preferably 100 µg/ml - 100 mg/ml, and particularly preferably
0.5 mg/ml - 50 mg/ml, preferably in single doses of 0.1 - 1000 mg, more preferably
0.5 - 500 mg, even more preferably 1 - 100 mg, and particularly preferably 2 - 10
mg, preferably administered in one single dose, however, if applicable also preferably
administered repeatedly, for example daily, every 2 or 3 days or weekly, for several,
e.g. 2, 3, 4, 5, 6, 7, 8, 9, or 10, weeks.
[0072] Prevention and/or treatment of cystitis as defined herein typically includes administration
of a pharmaceutical composition as defined above. The term "modulate" includes the
suppression of expression of JNK when it is over-expressed in the above disease. It
also includes suppression of phosphorylation of c-jun, ATF2 or NFAT4 in the above
disease by at least one chimeric peptide according to SEQ ID NO: 11 as a competitive
inhibitor of the natural c-jun, ATF2 and NFAT4 binding site in a cell. The term "modulate"
also includes suppression of hetero- and homomeric complexes of transcription factors
made up of, without being limited thereto, c-jun, ATF2, or NFAT4 and their related
partners, such as for example the AP-1 complex that is made up of c-jun, AFT2 and
c-fos. When a disease or disorder strongly related to JNK signaling as defined above
is associated with JNK overexpression, such suppressive JNK inhibitor sequences can
be introduced to a cell. In some instances, "modulate" may then include the increase
of JNK expression, for example by an IB peptide-specific antibody that blocks the
binding of an IB-peptide to JNK, thus preventing JNK inhibition by the IB-related
peptide.
[0073] Prevention and/or treatment of a subject with the pharmaceutical composition as disclosed
above may be typically accomplished by administering
(in vivo) an ("therapeutically effective") amount of said pharmaceutical composition to a subject,
wherein the subject may be e.g. any mammal, e.g. a human, a primate, mouse, rat, dog,
cat, cow, horse or pig, whereby a human is particularly preferred. The term "therapeutically
effective" means that the active component of the pharmaceutical composition is of
sufficient quantity to ameliorate the disease or disorder strongly related to JNK
signaling as defined above.
[0074] Accordingly, the invention refers to the chimeric peptide according to SEQ ID NO:
11, for use in the treatment of diseases or disorders strongly related to JNK signaling
as defined above, e.g. by modulating activated JNK signaling pathways.
[0075] The chimeric peptides according to SEQ ID NO: 11, may be utilized in (
in vitro) assays (e.g. immunoassays) to detect, prognose, diagnose, or monitor various conditions
and disease states selected from diseases or disorders strongly related to JNK signaling
as defined above, or monitor the treatment thereof. The immunoassays that may be utilized
include, but are not limited to, competitive and non-competitive assay systems using
techniques such as Western Blots, radioimmunoassays (RIA), enzyme linked immunosorbent
assay (ELISA), "sandwich" immunoassays, immunoprecipitation assays, precipitin reactions,
gel diffusion precipitin reactions, immunodiffusion assays, agglutination assays,
fluorescent immunoassays, complement-fixation assays, immunoradiometric assays, and
protein-A immunoassays, etc.. Alternatively, (
in vitro) assays may be performed by delivering chimeric peptides, as defined above, to target
cells typically selected from e.g. cultured animal cells, human cells or micro-organisms,
and to monitor the cell response by biophysical methods typically known to a skilled
person. The target cells typically used therein may be cultured cells
(in vitro) or
in vivo cells, i.e. cells composing the organs or tissues of living animals or humans, or
microorganisms found in living animals or humans.
[0076] Additionally, the use of kits for diagnostic or therapeutic purposes, particular
for the treatment, prevention or monitoring of diseases or disorders strongly related
to JNK signaling as defined above is described, wherein the kit includes one or more
containers containing JNK inhibitor sequences. The kit may, optionally, further comprise
a predetermined amount of a purified JNK inhibitor sequence as defined above, a chimeric
peptide as defined above, or nucleic acids encoding these, for use as a diagnostic,
standard, or control in the assays for the above purposes.
[0077] Unless otherwise defined, all technical and scientific terms used herein have the
same meaning as commonly understood by one of ordinary skill in the art to which this
invention belongs. Although methods and materials similar or equivalent to those described
herein can be used in the practice or testing of the present invention, suitable methods
and materials are described below. In the case of conflict, the present specification,
including definitions, will control. In addition, the materials, methods, and examples
are illustrative only and not intended to be limiting. Other features and advantages
of the invention will be apparent from the following detailed description and claims.
DESCRIPTION OF FIGURES
[0078]
- Figure 1
- are diagrams showing alignments of conserved JBD domain regions in the indicated transcription
factors. JNK inhibitor sequences used herein were identified by carrying out sequence
alignments. The results of this alignment are exemplarily shown in Figures 1A-1C.
Figure 1A depicts the region of highest homology between the JBDs of IB1, IB2, c-Jun
and ATF2. Panel B depicts the amino acid sequence of the JBDs of L-IB1(s) and L-IB1
for comparative reasons. Fully conserved residues are indicated by asterisks, while
residues changed to Ala in the GFP-JBD23Mut vector are indicated by open circles. Figure 1C shows the amino acid sequences of
chimeric proteins that include a JNK inhibitor sequence and a trafficking sequence.
In the example shown, the trafficking sequence is derived from the human immunodeficiency
virus (HIV) TAT polypeptide, and the JNK inhibitor sequence is derived from an IB1(s)
polypeptide. Human, mouse, and rat sequences are identical in Panels B and C.
- Figure 2
- is a diagram showing sequences of generic TAT-IB fusion peptides from human, mouse
and rat.
- Figure 3
- depicts the results of the inhibition of endogeneous JNK-activity in HepG2 cells using
fusion peptides according to SEQ ID NOs: 9 and 11 in an one-well approach. As can
be seen from Figure 3, particularly panel d in Figure 3, D-TAT-IB1(s) according to
SEQ ID NO: 11 (here abbreviated as D-JNKI) effectively inhibits JNK activity, even
better than L-TAT-IB1(s) according to SEQ ID NO: 9 (here abbreviated as L-JNKI).
- Figure 4
- shows for Example 11 the study design (A) and the AUCs method to assess allodynia
and hyperalgesia (B).
- Figure 5
- shows for Example 11 the effect of XG-102 (50 mg/mL, i.ves.) and ibuprofen (50 mg/mL,
i.ves.) treatments on nociceptive parameters 24h post-CYP injection. Nociceptive threshold
(A), nociceptive scores (B), AUC 1-8 g (C) or AUC 8-60 g (D) 24h after CYP injection.
Results are expressed as mean ± s.e.m. (n=10).

p<0.05,

p<0.01,

p<0.001 vs Vehicletreated group, Mann Whitney test (A and C), Two-way RM ANOVA (B), and Unpaired
t test and Mann Whitney test (D).
- Figure 6
- shows for Example 11 the effect of XG-102 (50 mg/mL, i.ves.) and ibuprofen (50 mg/mL,
i.ves.) treatments on urinary bladder wall thickness as well as haemorrhage scores
24h post-CYP injection. Urinary bladder wall thickness (A) or haemorrhage scores (B)
24h after CYP injection. Results are expressed as mean ± s.e.m. (n=10). ns= p>0.05,

p<0.01,

p<0.001 vs Vehicle-treated group, Mann Whitney test and Unpaired t test (A) or Mann Whitney test (B).
- Figure 7
- shows for Example 12 the effect of XG-102 (2 mg/kg, i.v.) and ibuprofen (10 mg/kg,
i.v.) treatments on nociceptive parameters 24h post-CYP injection. Nociceptive threshold
(A), nociceptive scores (B), AUC 1-8 g (C) or AUC 8-60 g (D) 24h after CYP injection.
Results are expressed as mean ± s.e.m. (n=10).

p<0.01,

p<0.001 vs Vehicle-treated group, Mann Whitney test (A), Two-way RM ANOVA (B), Mann Whitney
test and Unpaired t test (C) and Unpaired t test (D).
- Figure 8
- shows for Example 13 the study design (A) and the cystometric parameters analysed
(B).
- Figure 9

shows for Example 13 the effects of vehicle (i.v.) on cystometric parameters in conscious
female rats treated with CYP. Not significant versus basal values with a one way ANOVA with repeated measures, followed by a Dunnett's
post-test.
- Figure 10

shows for Example 13 the effects of XG-102 (2 mg/kg, i.v.) on cystometric parameters
in conscious female rats treated with CYP.

P< 0.01 versus basal values with a one way ANOVA with repeated measures, followed by a Dunnett's
post-test.
EXAMPLES
Example 1: Identification of JNK Inhibitor sequences
[0079] Amino acid sequences important for efficient interaction with JNK were identified
by sequence alignments between known JNK binding domain JBDs. A sequence comparison
between the JBDs of IB1 [SEQ ID NO: 13], IB2 [SEQ ID NO: 14], c-Jun [SEQ ID NO: 15]
and ATF2 [SEQ ID NO: 16] defined a weakly conserved 8 amino acid sequence (see Figure
1A). Since the JBDs of IB1 and IB2 are approximately 100 fold as efficient as c-Jun
or ATF2 in binding JNK (
Dickens et al. Science 277: 693 (1997), it was reasoned that conserved residues between IB1 and IB2 must be important to
confer maximal binding. The comparison between the JBDs of IB1 and IB2 defined two
blocks of seven and three amino acids that are highly conserved between the two sequences.
[0080] These two blocks are contained within a peptide sequence of 19 amino acids in L-IB1(s)
[SEQ ID NO: 1] and are also shown for comparative reasons in a 23 aa peptide sequence
derived from IB1 [SEQ ID NO: 17]. These sequences are shown in Figure 1B, dashes in
the L-IB1 sequence indicate a gap in the sequence in order to align the conserved
residues with L-IB1(s).
Example 2: Preparation of JNK Inhibitor Fusion Proteins
[0081] JNK inhibitor fusion proteins according to SEQ ID NO: 9 were synthesized by covalently
linking the C-terminal end of SEQ ID NO: 1 to a N-terminal 10 amino acid long carrier
peptide derived from the HIV-TAT4g 57 (
Vives et al., J Biol. Chem. 272: 16010 (1997)) according to SEQ ID NO: 5 via a linker consisting of two proline residues. This
linker was used to allow for maximal flexibility and prevent unwanted secondary structural
changes. The basic constructs were also prepared and designated L-IB1(s) (SEQ ID NO:
1) and L-TAT [SEQ ID NO: 5], respectively.
[0082] All-D retro-inverso peptides according to SEQ ID NO: 11 were synthesized accordingly.
The basic constructs were also prepared and designated D-IB1(s) [SEQ ID NO: 2] and
D-TAT [SEQ ID NO: 6], respectively.
[0083] All D and L fusion peptides according to SEQ ID NOs: 9, 10, 11 and 12 were produced
by classical Fmock synthesis and further analysed by Mass Spectrometry. They were
finally purified by HPLC. To determine the effects of the proline linker, two types
of TAT peptide were produced one with and one without two prolines. The addition of
the two prolines did not appear to modify the entry or the localization of the TAT
peptide inside cells. Generic peptides showing the conserved amino acid residues are
given in Figure 2.
Example 3: Inhibition of Cell Death By JBD 19
[0084] Effects of the 19 aa long JBD sequence of IB1(s) on JNK biological activities were
studied. The 19 aa sequence was linked N-terminal to the Green Fluorescent Protein
(GFP JBD19 construct), and the effect of this construct on pancreatic⊐beta-cell apoptosis
induced by IL1 was evaluated. This mode of apoptosis was previously shown to be blocked
by transfection with JBD
1-280 whereas specific inhibitors of ERK1/2 or p38 as known in the art did not protect.
[0085] Oligonucleotides corresponding to JBD19 and comprising a conserved sequence of 19
amino acids as well as a sequence mutated at the fully conserved regions were synthesized
and directionally inserted into the EcoRI and SalI sites of the pEGFP-N1 vector encoding
the Green Fluorescent Protein (GFP) (from Clontech). Insulin producing ETC-3 cells
were cultured in RPMI 1640 medium supplemented with 10% Fetal Calf Serum, 100 µg/mL
Streptomycin, 100 units/mL Penicillin and 2 mM Glutamine. Insulin producing ETC-3
cells were transfected with the indicated vectors and IL-1⊏ (10 ng/mL) was added to
the cell culture medium. The number of apoptotic cells was counted at 48 hours after
the addition of IL-1⊐ using an inverted fluorescence microscope. Apoptotic cells were
discriminated from normal cells by the characteristic "blebbing out" of the cytoplasm
and were counted after two days.
[0086] GFP is Green Fluorescent protein expression vector used as a control; JBD19 is the
vector expressing a chimeric GFP linked to the 19 aa sequence derived from the JBD
of IB1; JBD19Mut is the same vector as GFP-JBD19, but with a JBD mutated at four conserved
residues shown as Figure 1B ; and JBD
1-280 is the GFP vector linked to the entire JBD (aa 1-280). The GFP-JBD19 expressing construct
prevented IL-1⊏⊏ induced pancreatic ⊐⊏-cell apoptosis as efficiently as the entire
JBD
1-280.
[0087] As additional controls, sequences mutated at fully conserved IB1(s) residues had
greatly decreased ability to prevent apoptosis.
Example 4 : Cellular Import of TAT-IB1(s) Peptides
[0088] The ability of the L-and D-enantiomeric forms of TAT and TAT-IB1(s) peptides ("TAT-IB
peptides") to enter cells was evaluated. L-TAT, D-TAT, L-TAT-IB1(s), and D-TAT-IB1(s)
peptides [SEQ ID NOs: 5, 6, 9 and 12, respectively] were labeled by N-terminal addition
of a glycine residue conjugated to fluorescein. Labeled peptides (1 µM) were added
to ⊏TC-3 cell cultures, which were maintained as described in Example 3. At predetermined
times cells were washed with PBS and fixed for five minutes in ice-cold methanol-acetone
(1:1) before being examined under a fluorescence microscope. Fluorescein-labeled BSA
(1 µM, 12 moles/mole BSA) was used as a control. Results demonstrated that all the
above fluorescein labeled peptides had efficiently and rapidly (less than five minutes)
entered cells once added to the culture medium. Conversely, fluorescein labeled bovine
serum albumin (1 µM BSA, 12 moles fluorescein/mole BSA) did not enter the cells.
[0089] A time course study indicated that the intensity of the fluorescent signal for the
L-enantiomeric peptides decreased by 70% following a 24 hours period. Little to no
signal was present at 48 hours. In contrast, D-TAT and D-TAT-IB1(s) were extremely
stable inside the cells. Fluorescent signals from these all-D retro-inverso peptides
were still very strong 1 week later, and the signal was only slightly diminished at
2 weeks post treatment.
Example 5 : In vitro Inhibition of c-JUN, ATF2 and Elk1 Phosphorylation
[0090] The effects of the peptides on JNKs-mediated phosphorylation of their target transcription
factors were investigated
in vitro. Recombinant and non activated JNK1, JNK2 and JNK3 were produced using a TRANSCRIPTION
AND TRANSLATION rabbit reticulocyte lysate kit (Promega) and used in solid phase kinase
assays with c-Jun, ATF2 and Elk1, either alone or fused to glutathione-S-transferase
(GST), as substrates. Dose response studies were performed wherein L-TAT or L-TAT-IB1(s)
peptides (0-25 µM) were mixed with the recombinant JNK1, JNK2, or JNK3 kinases in
reaction buffer (20 mM Tris-acetate,1mM EGTA, 10 mM p-nitrophenyl-phosphate (pNPP),
5 mM sodium pyrophosphate, 10 mM p-glycerophosphate,1 mM dithiothreitol) for 20 minutes.
The kinase reactions were then initiated by the addition of 10 mM MgCl
2 and 5 pCi
33P-gamma-dATP and 1 µg of either GST-Jun (aa 1-89), GST-AFT2 (aa 1-96) or GST-ELK1
(aa 307-428). GST-fusion proteins were purchased from Stratagene (La Jolla, CA).
[0091] Ten µL of glutathione-agarose beads were also added to the mixture. Reaction products
were then separated by SDS-PAGE on a denaturing 10 % polyacrylamide gel. Gels were
dried and subsequently exposed to X-ray films (Kodak). Nearly complete inhibition
of c-Jun, ATF2 and Elk1 phosphorylation by JNKs was observed at TAT-IB(s) peptide
doses as low as 2.5 µM. However, a marked exception was the absence of TAT-IB(s) inhibition
of JNK3 phosphorylation of Elk1. Overall, the TAT-IB1(s) peptide showed superior effects
in inhibiting JNK family phosphorylation of their target transcription factors. The
ability of D-TAT, D-TAT-IB1(s) and L-TAT-IB1(s) peptides (0-250 µM dosage study) to
inhibit GST-Jun (aa 1-73) phosphorylation by recombinant JNK1, JNK2, and JNK3 by were
analyzed as described above. Overall, D-TAT-IB1(s) peptide decreased JNK-mediated
phosphorylation of c-Jun, but at levels approximately 10-20 fold less efficiently
than L-TAT-IB1(s).
Example 6: In vivo inhibition of c-JUN phosphorylation by TAT-IB(s) peptides as defined herein
[0092] To determine whether the cell-permeable peptides as defined herein could block JNK
signaling
in vivo, we used a heterologous GAL4 system. HeLa cells, cultured as described above, were
co-transfected with the 5xGAL-LUC reporter vector together with the GAL-Jun expression
construct (Stratagene) comprising the activation domain of c-Jun (amino acids 1-89)
linked to the GAL4 DNA-binding domain. Activation of JNK was achieved by the co-transfection
of vectors expressing the directly upstream kinases MKK4 and MKK7 (see
Whitmarsh et al., Science 285: 1573 (1999)). Briefly, 3×10
5 cells were transfected with the plasmids in 3.5-cm dishes using DOTAP (Boehringer
Mannheim) following instructions from the manufacturer. For experiments involving
GAL-Jun, 20 ng of the plasmid was transfected with1 µg of the reporter plasmid pFR-Luc
(Stratagene) and 0.5 µg of either MKK4 or MKK7 expressing plasmids. Three hours following
transfection, cell media were changed and TAT and TAT-IB1(s) peptides (1 µM) were
added. The luciferase activities were measured 16 hours later using the "Dual Reporter
System" from Promega after normalization to protein content. Addition of TAT-IB1(s)
peptide blocked activation of c-Jun following MKK4 and MKK7 mediated activation of
JNK. Because HeLa cells express JNK1 and JNK2 isoforms but not JNK3, we transfected
cells with JNK3. Again, the TAT-IB(s) peptide inhibited JNK2 mediated activation of
c-Jun.
Example 7: Synthesis of all-D retro-inverso IB(s) Peptides and variants thereof
[0093] Peptides of the invention may be all-D amino acid peptides synthesized in reverse
to prevent natural proteolysis (i.e. all-D retro-inverso peptides). An all-D retro-inverso
peptide of the invention would provide a peptide with functional properties similar
to the native peptide, wherein the side groups of the component amino acids would
correspond to the native peptide alignment, but would retain a protease resistant
backbone.
[0094] Retro-inverso peptides of the invention are analogs synthesized using D-amino acids
by attaching the amino acids in a peptide chain such that the sequence of amino acids
in the retro-inverso peptide analog is exactly opposite of that in the selected peptide
which serves as the model. To illustrate, if the naturally occurring TAT protein (formed
of L-amino acids) has the sequence GRKKRRQRRR [SEQ ID NO: 5], the retro-inverso peptide
analog of this peptide (formed of D-amino acids) would have the sequence RRRQRRKKRG
[SEQ ID NO: 6]. The procedures for synthesizing a chain of D-amino acids to form the
retro-inverso peptides are known in the art (see e.g.
Jameson et al., Nature, 368,744-746 (1994);
Brady et al., Nature, 368,692-693 (1994);
Guichard et al., J. Med. Chem. 39,2030-2039 (1996)). Specifically, the retro-peptides according to SEQ ID NOs 2, 4, 6, 8, 11-12, 18,
20, 22 and 25-26, were produced by classical F-mock synthesis and further analyzed
by Mass Spectrometry. They were finally purified by HPLC.
[0095] Since an inherent problem with native peptides is degradation by natural proteases
and inherent immunogenicity, the heterobivalent or heteromultivalent compounds of
this invention will be prepared to include the "retro-inverso isomer" of the desired
peptide. Protecting the peptide from natural proteolysis should therefore increase
the effectiveness of the specific heterobivalent or heteromultivalent compound, both
by prolonging half-life and decreasing the extent of the immune response aimed at
actively destroying the peptides.
Example 8: Long term biological activity of all-D retro-inverso IB(s) Peptides and
variants thereof
[0096] Long term biological activity is predicted for the D-TAT-IB(s) retro-inverso containing
peptide heteroconjugate (see chimeric sequences above) when compared to the native
L-amino acid analog owing to protection of the D-TAT-IB(s) peptide from degradation
by native proteases, as shown in Example 5.
[0097] Inhibition of IL-1⊏⊐ induced pancreatic beta-cell death by the D-TAT-IB1(s) peptide
was analyzed. ⊏TC-3 cells were incubated as described above for 30 minutes with one
single addition of the indicated peptides (1 µM), then IL-1 (10 ng/ml) was added.
[0098] Apoptotic cells were then counted after two days of incubation with IL-1⊐⊏ by use
of Propidium Iodide and Hoechst 33342 nuclear staining. A minimum of 1,000 cells were
counted for each experiment. Standard Error of the Means (SEM) are indicated, n=5.
The D-TAT-IB1 peptide decreased IL-1 induced apoptosis to a similar extent as L-TAT-IB
peptides.
[0099] Long term inhibition of IL-1P induced cell-death by the D-TAT-IB1 peptide was also
analyzed. ⊏TC-3 cells were incubated as above for 30 minutes with one single addition
of the indicated peptides (1 µM), then IL-1⊐⊏ C (10 ng/ml) was added, followed by
addition of the cytokine every two days. Apoptotic cells were then counted after 15
days of incubation with IL-1 by use of propidium iodide and Hoechst 33342 nuclear
staining. Note that one single addition of the TAT-IB1 peptide does not confer long-term
protection. A minimum of 1.000 cells were counted for each experiment. As a result,
D-TAT-IB1(s), but not L-TAT-IB1(s), was able to confer long term (15 day) protection.
Example 9: Inhibition of endogenous JNK activity in HepG2 cells using an all-in one
well approach (see Figure 3).
[0100] HepG2 cells were seeded at 3'000 cells/well the day prior the experiment. Then, increasing
concentrations of either interleukin-1⊐ [IL-1beta⊐v)] or tumor necrosis factor ⊐ [TNFalpha]
(a) were added to activate JNK for 30 minutes. Cells were lysed in 20mM Hepes, 0.5%
Tween pH 7.4 and processed for AlphaScreen JNK. (b) Z' for the JNK activity induced
by 10 ng/ml IL-1⊐ and measured in 384 wells/plate (n=96). (c) Inhibition of endogenous
IL-1beta-induced JNK activity with chemical JNK inhibitors [staurosporin and SP600125].
(d) Effect of peptidic inhibitors L-TAT-IB1(s) according to SEQ ID NO: 9 [here abbreviated
as L-JNKi (v)) and D-TAT-IB1(s) according to SEQ ID NO: 11 (here abbreviated as D-JNKi)
and JBDs (corresponds to L-JNKI without the TAT sequence)] on IL-1⊐ dependent JNK
activity. All panels are representative of three independent experiments (n=3).
Methods: Alphascreen kinase assay
[0101] Principle: AlphaScreen is a non-radioactive bead-based technology used to study biomolecular
interactions in a microplate format. The acronym ALPHA stands for Amplified Luminescence
Proximity Homogenous Assay. It involves a biological interaction that brings a "donor"
and an "acceptor" beads in close proximity, then a cascade of chemical reactions acts
to produce an amplified signal. Upon laser excitation at 680 nm, a photosensitizer
(phthalocyanine) in the "donor" bead converts ambient oxygen to an excited singlet
state. Within its 4 µsec half-life, the singlet oxygen molecule can diffuse up to
approximately 200 nm in solution and if an acceptor bead is within that proximity,
the singlet oxygen reacts with a thioxene derivative in the "acceptor" bead, generating
chemiluminescence at 370 nm that further activates fluorophores contained in the same
"acceptor" bead. The excited fluorophores subsequently emit light at 520-620 nm. In
the absence of an acceptor bead, singlet oxygen falls to ground state and no signal
is produced.
[0102] Kinase reagents (B-GST-cJun, anti P-cJun antibody and active JNK3) were first diluted
in kinase buffer (20 mM Tris-HCl pH 7.6, 10 mM MgCl
2, 1 mM DTT, 100 µM Na
3VO
4, 0.01% Tween-20) and added to wells (15 µl). Reactions were then incubated in presence
of 10 µM of ATP for 1h at 23°C. Detection was performed by an addition of 10 µl of
beads mix (Protein A acceptor 20 µg/ml and Streptavidin donor 20 µg/ml), diluted in
detection buffer (20 mM Tris-HCl pH 7.4, 20 mM NaCl, 80 mM EDTA, 0.3% BSA), followed
by an another one-hour incubation at 23°C in the dark. For measurement of JNK endogenous
activity, kinase assays were performed as described above except active JNK3 was replaced
by cells lysates and reaction kinase components were added after the cells lysis.
B-GST-cjun and P-cJun antibody were used at the same concentrations whereas ATP was
used at 50 µM instead of 10 µM. AlphaScreen signal was analyzed directly on the Fusion
or En Vision apparatus.
Example 10: Safety, tolerability and pharmacokinetics of a single intravenous infusion
of 10, 40 and 80 µg/kg XG-102 (SEQ ID No.: 11) administered to healthy male volunteers
in a randomized, double blind, placebo controlled, dose escalating Phase I study
[0103] The primary objective of the study was to assess the safety and tolerability of XG-102
following intravenous (iv) infusion of single escalating doses of XG-102 to healthy
male volunteers. The secondary objective of the study was to assess the pharmacokinetics
of XG-102 following iv infusion of single escalating doses of XG-102 to healthy male
volunteers. Doses were administered as a 60 minute iv infusion. For control purposes,
placebo iv infusion was administered to control subjects.
[0104] This was a single-centre, randomized, double blind, placebo controlled, ascending
single dose, sequential group study. Three dose levels of XG-102 (10, 40 and 80 µg/kg)
were studied in ascending order of dose, within each group subjects were randomized
such that 6 subjects received XG-102, and 2 subjects received placebo. Screening was
performed in the 3-week period prior to dosing. Dosing occurred on Day 0 for each
subject. The Investigator checked on all subjects' well-being prior to their discharge
from the CRU (at 24 hours after dosing). Subjects returned to the CRU 8 ±2 days and
28 ±5 days after dosing for post study assessments.
[0105] A total of 24 subjects (healthy male subjects in the age of 18 to 45), in 3 groups
of 8. 24 subjects entered and completed the study. Data for all subjects were included
in the safety analyses; data for all subjects who received XG-102 were included in
the pharmacokinetic analyses.
| Summary: |
| Pharmacokinetic results: |
| The pharmacokinetic parameters of XG-102 are presented in the following table: |
| |
Parameter |
10 µg/kg (N=6) |
40 µg/kg (N=6) |
80 µg/kg (N=6) |
| |
AUC00-last (ng.h/mL) |
24.7 (26.1) |
134 (15.2) |
431 (41.0) |
| AUC0-∞ (ng.h/mL) |
36.8 (23.4) |
146 (17.5) |
443 (41.0) |
| AUCextrapa |
34.1 (18.6 - 49.7) |
6.7 (4.2 - 12.9) |
2.9 (1.9 - 3.4) |
| Cmax (ng/mL) |
31.3 (24.4) |
146 (16.7) |
362 (34.9) |
| tmaxa (h) |
1.00 (1.00 - 1.05) |
1.00 (1.00 - 1.00) |
1.00 (1.00 - 1.00) |
| |
AUC0-last(norm) (ng.h/mL)/(µg/kg) |
3.10 (29.3) |
3.64 (13.8) |
5.91 (41.8) |
| AUC0-∞(norm) (ng.h/mL)/(µg/kg) |
4.61 (24.8) |
3.96 (15.7) |
6.07 (41.8) |
| Cmax(norm) (ng/mL)/(µg/kg) |
3.93 (28.0) |
3.98 (15.9) |
4.97 (35.6) |
| |
MRT (h) |
1.00 (29.9) |
0.76 (11.0) |
1.02 (14.7) |
| t½ (h) |
0.57 (44.6) |
0.36 (22.3) |
0.65 (38.8) |
| CL (mL/h) |
17537 (23.9) |
18399 (16.4) |
13217 (43.5) |
| CL (mL/h/kg) |
217 (24.8) |
253 (15.7) |
165 (41.8) |
| Vss (mL) |
17536 (36.8) |
14040 (15.7) |
13500 (30.5) |
| Vss (mL/kg) |
217 (27.5) |
193 (13.7) |
168 (29.8) |
| |
Geometric mean (CV%) data are presented |
| |
N = Number of subjects studied |
| |
(norm) = Normalized for dose and body weight |
| |
a Median (min max) |
[0106] The observed values of t
1/2 were short. Both peak exposure as measured by C
max and cumulative exposure as measured by AUC
0-last increased with dose. The increase with dose of C
max appears to be more than linearly proportional on the basis of graphical examinations
and of the geometric mean of its dose normalized values which after the highest 80
µg/kg dose are above the 90% confidence intervals for the other doses. The increase
with dose of AUC
0-last is clearly more than linearly proportional from 40 to 80 µg/kg as the 90% confidence
intervals for its geometric mean dose normalized value does not overlap with those
after the other tested doses; whereas when comparing values after 10 and 40 µg/kg
the 90% confidence intervals overlap, but its geometric mean dose normalized value
after the 10 µg/kg dose is lower than all values in the corresponding 90% confidence
interval after the 40 µg/kg dose.
[0107] XG-102 was safe and well tolerated when administered as single iv doses of 10, 40
or 80 µg/kg to healthy male subjects. The incidence of adverse events in subjects
who received XG-102 was similar to the incidence in subjects who received placebo.
There were no clinically significant findings in clinical laboratory data, vital signs,
ECGs, physical examinations or ocular examinations (fundus and IOP).
[0108] After the end of XG-102 intravenous infusion, its plasma concentrations quickly decreased,
leading to values below the lower limit of quantification by at most 2 hours after
the start of 10 µg/kg XG-102 iv infusions, 3 hours after the start of 40 µg/kg XG-102
iv infusions and by at most 7 hours after the start of 80 µg/kg XG-102 intravenous
infusions. The measured t
1/2 and MRT values are short, with geometric mean values per dose level ranging from
0.36 to 0.65 hours and from 0.76 to 1.02 hours, respectively.
[0109] The AUC
0-last of XG-102 increases in a more than linear proportion with dose in the tested dose
range, with non-overlapping 90% confidence intervals for its geometric mean dose normalized
values between the 40 µg/kg and the 80 µg/kg dose and only limited overlap between
the 90% confidence intervals for its geometric mean dose normalized values between
the 10 µg/kg and the 40 µg/kg.
[0110] The C
max of XG-102 appears to increase in a more than linear proportion with dose from 40
to 80 µg/kg. The geometric mean dose normalized C
max in the 80 µg/kg dose group is higher than and outside the 90% confidence intervals
for the geometric mean dose normalized C
max in the other dose groups, but the 90% confidence intervals for the geometric mean
dose normalized C
max overlap among all dose levels.
[0111] The intersubject variability of XG-102 pharmacokinetic parameters was moderate in
subjects treated with 10 and 40 µg/kg doses (CV% of the geometric mean for most parameters
approximately in the 15-30% range, exception was t
1/2 and total V
ss at the 10 µg/kg dose group), but higher in the 80 µg/kg dose group, in the approximately
29-44% range, other than for MRT (14.7%). This higher variability may be either an
effect of the low sample size or a consequence of the observed non-linearities which
are clearer at this dose.
Example 11: Effects of XG-102 (SEQ ID No. 11) administered intravesically on acute cystitis model
induced by cyclophosphamide in conscious rats: Evaluation of visceral pain and urinary
bladder inflammation
[0112] The aim of the present study was to evaluate the effects of intravesical treatment
with XG-102 (50 mg/mL) on urinary bladder pain and inflammation in acute CYP-induced
cystitis in female Sprague-Dawley rats. This preclinical model is well-used to test
therapeutic approaches for the treatment of interstitial cystitis / painful bladder
syndrome (IC/PBS).
[0113] Adult female Sprague-Dawley rats (Janvier Labs, Le Genest Saint Isle, France), weighing
215 ± 20 g at the beginning of the experiments, were used. Animals were acclimatized
to the laboratory conditions for at least 3 days before the start of any experiments.
The animals were allocated to the following four experimental groups (n=10 animals
per group):
| Group |
Injection (i.p.) |
Treatment (i.ves.) |
n |
| 1 |
Saline |
Vehicle (500 µL, i.ves.) |
10 |
| 2 |
CYP |
Vehicle (500 µL, i.ves.) |
10 |
| 3 |
CYP |
XG-102 (50 mg/mL, i.ves.) |
10 |
| 4 |
CYP |
Ibuprofen (50 mg/mL, i.ves.) |
10 |
[0114] To induce acute cystitis, a single i.p. injection of CYP at a dose of 150 mg/kg in
a final volume of 5 mL/kg was performed. Control rats received physiological saline
under the same experimental conditions as CYP (final volume of 5 mL/kg, i.p.).
[0115] On the day of each experiment, weight of rats was recorded. Then, in a randomized
manner, 500 µL of XG-102 (50 mg/mL), ibuprofen (50 mg/mL) or vehicle were intravesically
infused during 30 min under isoflurane anesthesia (2% - 3%).
[0116] Assessment of referred visceral pain using von Frey filaments:
Standardized conditions including fixed time-of-day (a.m. to minimize the potential
circadian variations in the behaviours responses) and single-experimenter testing
of all animals were applied to minimize variability behavior-based pain testing. Visceral
pain including allodynia and hyperalgesia was evaluated by applying to the lower abdomen,
close to the urinary bladder, a set of 8 calibrated von Frey filaments of increasing
forces (1, 2, 4, 6, 8, 10, 26 and 60 g) with an interstimulus interval of 5 seconds.
Prior testing, the abdominal area designed for mechanical stimulation of each animal
was shaved. Animals were then placed on a raised wire mesh floor under individual
transparent Plexiglas box and acclimatized for at least 30 minutes before starting
the von Frey test. Filaments were then applied 1-2 seconds through the mesh floor
with enough strength to cause the filament to slightly bend. Each filament was tested
3 times. Care was taken to stimulate different areas within the lower abdominal region
in the vicinity of the urinary bladder to avoid desensitization.
[0117] Nociceptive behaviors were scored for each animal and each filament as follows:
| Score |
Behavior |
| 0 |
no response |
| 1 |
reaction of the animal (e.g. retraction of the abdomen) |
| 2 |
reaction of the animal and change of position |
| 3 |
reaction of the animal, change of position and licking of the site stimulated with
von Frey filaments and / or vocalization |
[0118] The study design is schematically shown in Fig. 4 A. Birefly, acute cystitis was
induced by CYP injection (i.p.) at D0 (as described above). XG-102, ibuprofen or vehicle
was intravesically administrated once just after CYP injection (as described above).
Von Frey testing was performed in a non-blinded manner as follow:
- At D-1, rats were acclimatized to the individual Plexiglas box for a minimum of 30
min and to the von Frey filaments application, in order to decrease the level of stress
due to the new environment.
- At D0, von Frey testing was performed 15 min before CYP or saline injection in order
to obtain basal values (D0, T=-15min).
- At D1, von Frey testing was performed 24 hours after CYP or saline injection in order
to analyze test compounds effect on CYP-induced visceral pain (D1, T=+24h).
- Just after von Frey testing (+24h), rats were anesthetized for blood samples collection,
then sacrificed and urinary bladders were collected as described below.
[0119] At the end of the experiment, rats were sacrificed by injection of pentobarbital
(54.7 mg/mL, 0.5 mL/rat, i.p.) followed by cervical dislocation. Urinary bladders
were rapidly collected and cleaned from lipoid tissue. Urinary bladders were weighed,
cut at the bladder neck and haemorrhage scoring was performed (see table below). Finally,
wall thickness was measured using a digital caliper by placing the bladder wall between
the two outside jaws. Urinary bladder haemorrhage scores were adapted from Gray's
criteria (Gray
et al., 1986) as follows:
| Scores |
Haemorrhage |
| 0 |
absent - normal aspect |
| 1 |
telangiectasia - dilatation of the mucosal blood vessels |
| 2 |
petechial haemorrhages - mucosal pinpoint red dots (glomerulation) |
| 3 |
Hemorrhagic spots with blood clots |
[0120] Nociceptive parameters are expressed as follows:
| Parameters |
Expression |
Description |
| nociceptive threshold |
g |
von Frey filament for which a first score of at least 1 (for 3 applications) is obtained |
| nociceptive scores |
% |
% of the maximal response (maximum score = 9) for 3 pooled applications |
| area under the curve (AUC) 1-8 g (allodynia) |
% scores x |
plot of individual percentage of nociceptive scores against von Frey forces from :
1 to 8 g or 8 to 60g |
| area under the curve (AUC) 8-60 g (hyperalgesia) |
g |
[0121] AUCs were calculated using GraphPad Prism
® (GraphPad Software Inc., La Jolla, CA, USA). The AUCs method to assess allodynia
and hyperalgesia is schematically shown in Figure 4 B.
[0122] Macroscopic parameters are expressed as follows:
| Parameters |
Expression |
| whole urinary bladder weight |
mg and % of body weight |
| haemorrhage |
scores |
| urinary wall thickness |
mm |
Results:
[0123] Before CYP injection, no significant difference in the nociceptive parameters were
observed between the 3 different CYP-injected groups. In order to analyse effect of
XG-102 on CYP-induced visceral pain, nociceptive parameters were compared between
the Vehicle- and the XG-102-treated groups. Twenty-four hours after CYP injection,
nociceptive threshold was significantly increased by XG-102 treatment as compared
to vehicle (p<0.01, Figure 5 A). XG-102 treatment also significantly decreased nociceptive
scores in CYP-injected rats as compared to vehicle (p<0.001, Figure 5 B). In addition,
AUC 1-8 g was significantly decreased by XG-102 treatment as compared to vehicle (p<0.001,
Figure 5 C). Similarly, AUC 8-60 g was reduced by XG-102 treatment as compared to
vehicle (p<0.01, Figure 5 D). In order to analyse the effects of ibuprofen on CYP-induced
visceral pain, nociceptive parameters were compared between the Vehicle- and the Ibuprofen-treated
groups. Nociceptive threshold was significantly increased by ibuprofen treatment as
compared to vehicle in CYPinjected rats (p<0.01, Figure 5 A). Similarly in the Ibuprofen
group significant decrease of nociceptive scores was observed as compared to vehicle
(p<0.01, Figure 5 B). In addition, AUC 1-8 g and AUC 8-60 g were significantly decreased
by ibuprofen treatment as compared to vehicle (p<0.001 and p<0.05, Figures 5 C and
101 D, respectively).
[0124] Moreover, urinary wall thickness was significantly decreased in XG-102-treated rats
(p<0.01, Figure 6 A). Although XG-102 treatment also showed a trend towards decreased
haemorrhage scores, it did not reach statistical significance (Figure 6 B). For ibuprofen,
also a significant decrease was observed in urinary bladder wall thickness (p<0.001,
Figure 6 A). However, no significant change was observed regarding haemorrhage scores
(p>0.05, Figure 6 B) in the Ibuprofen-treated group. It is noteworthy that reddish
urine was noticed for some animal in the Ibuprofen-treated group.
[0125] Taken together, intravesical treatment of XG-102 (50 mg/mL) significantly reversed
visceral pain induced by CYP, 24h after its injection. XG-102 efficiently inhibited
both allodynia and hyperalgesia. On analyzed inflammatory parameters, XG-102 decreased
urinary bladder inflammation (wall thickness). In conclusion, administered intravesically,
XG-102 displayed strong antinociceptive effects and significant anti-inflammatory
properties in an experimental model of IC/PBS.
Example 12: Effects of XG-102 (SEQ ID No. 11) administered intravenously on acute cystitis model induced by cyclophosphamide in conscious rats: Evaluation
of visceral pain (comparative)
[0126] The aim of the present study was to evaluate the effects of intravenous treatment
with XG-102 (2 mg/kg) on urinary bladder pain in acute CYP-induced cystitis in female
Sprague-Dawley rats. This preclinical model is well-used to test therapeutic approaches
for the treatment of interstitial cystitis / painful bladder syndrome (IC/PBS).
[0127] Adult female Sprague-Dawley rats (Janvier Labs, Le Genest Saint Isle, France), weighing
215 ± 20 g at the beginning of the experiments, were used. Animals were acclimatized
to the laboratory conditions for at least 3 days before the start of any experiments.
The animals were allocated to the following four experimental groups (n=10 animals
per group):
| Group |
Injection (i.p.) |
Treatment (i.ves.) |
n |
| 1 |
Saline |
Vehicle (1 mL/kg, i.v.) |
10 |
| 2 |
CYP |
Vehicle (1 mL/kg, i.v.) |
10 |
| 3 |
CYP |
XG-102 (2 mg/kg, i.v.) |
10 |
| 4 |
CYP |
Ibuprofen (10 mg/kg, i.v.) |
10 |
[0128] To induce acute cystitis, a single i.p. injection of CYP at a dose of 150 mg/kg in
a final volume of 5 mL/kg was performed. Control rats received physiological saline
under the same experimental conditions as CYP (final volume of 5 mL/kg, i.p.).
[0129] On the day of each experiment, weight of rats was recorded. Then, in a randomized
manner, XG-102 (2 mg/kg), ibuprofen (10 mg/kg) or vehicle were intravenously administered
at a volume of 1 mL/kg.
[0130] Assessment of referred visceral pain using von Frey filaments:
Standardized conditions including fixed time-of-day (a.m. to minimize the potential
circadian variations in the behaviours responses) and single-experimenter testing
of all animals were applied to minimize variability behavior-based pain testing. Visceral
pain including allodynia and hyperalgesia was evaluated by applying to the lower abdomen,
close to the urinary bladder, a set of 8 calibrated von Frey filaments of increasing
forces (1, 2, 4, 6, 8, 10, 26 and 60 g) with an interstimulus interval of 5 seconds.
Prior testing, the abdominal area designed for mechanical stimulation of each animal
was shaved. Animals were then placed on a raised wire mesh floor under individual
transparent Plexiglas box and acclimatized for at least 30 minutes before starting
the von Frey test. Filaments were then applied 1-2 seconds through the mesh floor
with enough strength to cause the filament to slightly bend. Each filament was tested
3 times. Care was taken to stimulate different areas within the lower abdominal region
in the vicinity of the urinary bladder to avoid desensitization.
[0131] Nociceptive behaviors were scored for each animal and each filament as follows:
| Score |
Behavior |
| 0 |
no response |
| 1 |
reaction of the animal (e.g. retraction of the abdomen) |
| 2 |
reaction of the animal and change of position |
| 3 |
reaction of the animal, change of position and licking of the site stimulated with
von Frey filaments and / or vocalization |
[0132] The study design differs from that of Example 11 (cf. Figure 4 A) only in the route
of administration (intravenously instead of intravesically) and the doses as specified
above. Birefly, acute cystitis was induced by CYP injection (i.p.) at D0 (as described
above). XG-102, ibuprofen or vehicle was intravvenously administrated once just after
CYP injection (as described above). Von Frey testing was performed in a non-blinded
manner as follow:
- At D-1, rats were acclimatized to the individual Plexiglas box for a minimum of 30
min and to the von Frey filaments application, in order to decrease the level of stress
due to the new environment.
- At D0, von Frey testing was performed 15 min before CYP or saline injection in order
to obtain basal values (D0, T=-15min).
- At D1, von Frey testing was performed 24 hours after CYP or saline injection in order
to analyze test compounds effect on CYP-induced visceral pain (D1, T=+24h).
- Just after von Frey testing (+24h), rats were anesthetized for blood samples collection,
then sacrificed and urinary bladders were collected as described below.
[0133] Nociceptive parameters are expressed as follows:
| Parameters |
Expression |
Description |
| nociceptive threshold |
g |
von Frey filament for which a first score of at least 1 (for 3 applications) is obtained |
| nociceptive scores |
% |
% of the maximal response (maximum score = 9) for 3 pooled applications |
| area under the curve (AUC) 1-8 g (allodynia) |
% scores x |
plot of individual percentage of nociceptive scores against von Frey forces from :
1 to 8 g or 8 to 60g |
| area under the curve (AUC) 8-60 g (hyperalgesia) |
g |
[0134] AUCs were calculated using GraphPad Prism
® (GraphPad Software Inc., La Jolla, CA, USA). The AUCs method to assess allodynia
and hyperalgesia is schematically shown in Figure 4 B.
Results:
[0135] Before CYP injection, no significant difference in the nociceptive parameters was
observed between the 3 different CYP-injected groups. In order to analyse the effect
of XG-102 on CYP-induced visceral pain, nociceptive parameters were compared between
the Vehicle- and the XG-102-treated groups independently. Twenty-four hours after
CYP injection, nociceptive threshold was significantly increased by XG-102 treatment
as compared to vehicle (p<0.01, Figure 7 A). XG-102 treatment significantly decreased
nociceptive scores in CYP-injected rats as compared to vehicle (p<0.001, Figure 7
B). In addition, AUC 1-8 g was significantly decreased by XG-102 treatment as compared
to vehicle (p<0.001, Figure 7 C). Similarly, AUC 8-60 g was significantly reduced
by XG-102 treatment as compared to vehicle (p<0.001, Figure 7 D). In order to analyse
effect of ibuprofen on CYP-induced visceral pain, nociceptive parameters were compared
between Vehicle- and Ibuprofen-treated groups. Nociceptive threshold was significantly
increased by ibuprofen treatment as compared to vehicle in CYPinjected rats (p<0.01,
Figure 7 A). Ibuprofen treatment significantly decrease nociceptive scores as compared
to vehicle (p<0.001, Figure 7 B).
[0136] In addition, AUC 1-8 g and AUC 8-60 g were significantly reduced by ibuprofen treatment
as compared to vehicle (p<0.001, Figures 7 C and 7 D).
[0137] Taken together, intravenous treatment of XG-102 (2 mg/kg) thus significantly reversed
visceral pain induced by CYP, 24h after its injection. XG-102 efficiently inhibited
both allodynia and hyperalgesia. Similar effects were observed with intravenous administration
of ibuprofen (10 mg/kg). In conclusion, in the experimental cystitis preclinical model,
XG-102 displayed significant anti-nociceptive properties.
Example 13: Effects of XG-102 (SEQ ID No. 11) administered intravenously on cystometric parameters
in conscious rats with acute cystitis induced by cyclophosphamide (comparative)
[0138] The aim of the present study was to evaluate the effects of intravenous (i.v.) administration
of XG-102 (2 mg/kg) on cystometric parameters in CYP-induced cystitis in conscious
female Sprague-Dawley rats. This preclinical model is well-used to test therapeutic
approaches for the treatment of interstitial cystitis / painful bladder syndrome (IC/PBS).
[0139] Female Sprague-Dawley rats (211 - 281 g) were used (Janvier Labs, Le Genest Saint
Isle, France). They were delivered to the laboratory at least 5 days before the experiments
in order to be acclimatized to laboratory conditions. The animals were allocated to
the following three experimental groups:
| Groups |
i.p. administration |
i.v. treatment |
dose |
n |
| 1 |
Physiological saline |
Vehicle |
- |
11 |
| 2 |
CYP 150 mg/kg |
Vehicle |
- |
10 |
| 3 |
CYP 150 mg/kg |
XG-102 |
2 mg/kg |
11 |
[0140] Rats were anesthetized with isoflurane (1.5 - 3%). After a laparotomy, bladder was
exteriorized and a polyethylene catheter (0.58 and 0.96 mm of internal and outer diameter,
respectively) was implanted in the bladder through the dome and exteriorized at the
scapular level. A jugular polyethylene catheter (0.58 and 0.96 mm of internal and
outer diameter, respectively) was also implanted and exteriorized at the scapular
level for i.v. administrations.
[0141] At D-1 (24 hours after the surgery), a single dose of CYP at 150 mg/kg or its vehicle
(physiological saline: 0.9% NaCl) was administered i.p. at 5 mL/kg.
[0143] XG-102 or vehicle (1 mL in 5 min) was administered intravenously after 1 hour of
basal period.
[0144] The study design is schematically shown in Fig. 8 A.
[0145] The following cystometric parameters were analysed (see Fig. 8 B):
- Threshold Pressure (ThP, mmHg), pressure just before micturition,
- Amplitude of micturition (AM), i.e. pressure between threshold pressure (ThP) and maximal pressure of micturition (MP)
(mmHg),
- Intercontraction interval (ICI), i.e. time between two subsequent micturitions (sec), and
- Bladder capacity (BC), i.e. ICI x infusion rate (mL).
Results:
[0146] No effects of vehicle (i.v.) was observed on the cystometric parameters ICI, BC,
ThP and AM parameters in conscious rats treated with CYP, compared to basal values
(Figure 9 A, B, C and D). In contrats, XG-102 (2 mg/kg, i.v.) significantly increased
ICI and BC 30-60 min post-administration in CYP-treated rats, compared to basal values
(P<0.01, Figure 10 A and B). This increase was associated with a significant decrease
in ThP at the same time point (P<0.01, Figure 10 C).
[0147] Taken together, intravenous treatment of XG-102 (2 mg/kg) significantly increased
ICI and BC and decreased ThP for the period of 30-60 min post administration.