BACKGROUND
[0001] Aminoquinolines, with chloroquine (CQ) and hydroxychloroquine (HQ) as prototypes,
are quinone reductase 2 (QR2) inhibitors that were originally developed to treat malaria
but were subsequently found to have therapeutic efficacy for other indications, including,
inter alia, autoimmune diseases such as systemic lupus erythematosis (SLE) and rheumatoid
arthritis (RA).
Singer et al., "Update on immunosuppressive therapy," Curr. Opin. Rheumatol. 1998,
10:169-173;
Wallace, "The use of chloroquine and hydroxychloroquine for non-infectious conditions
other than rheumatoid arthritis or lupus: a crucial review," Lupus 1996, 5 Suppl 1:
S59-64. In SLE and RA, aminoquinolines are a mainstay of first-line therapy and are often
used in combination with other medications. Aminoquinolines not only improve the signs
and symptoms of SLE and RA but also have beneficial effects on lipid metabolism and
reduce the occurrence of thrombosis. In patients with inflammatory or erosive osteoarthritis,
similar benefits are observed. Efficacy has also been shown when used as adjunctive
therapy in graft-vs-host disease, cancer, and HIV.
Savarino et al., "Effects of chloroquine on viral infections: an old drug against
today's diseases?" Lancet Infect. Dis. 2003, 3(11):722-7;
Savarino et al., "Risks and benefits of chloroquine use in anticancer strategies,"
Lancet Oncol. 2006, 7(10):792-3;
Sotelo et al., "Adding chloroquine to conventional treatment for glioblastoma multiforme:
a randomized, double-blind, placebo-controlled trial," Ann. Intern. Med. 2006, 144(5):337-43.
[0002] The potential for chloroquine (CQ) in neuroprotection has been studied previously
in preclinical models of stroke, excitotoxic and traumatic injuries, although the
therapeutic mechanisms have remained elusive. CQ dramatically limits microglial and
PMN migration into injury sites in the brain, decreases reactive astrogliosis and
neovascularization, and reduces stroke volumes by 60% in a permanent MCA occlusion
model.
Giulian et al., "The role of mononuclear phagocytes in wound healing after traumatic
injury to adult mammalian brain," J. Neurosci. 1989, 9:4416-4429;
Ivanova et al., "Cerebral ischemia enhances polyamine oxidation: identification of
enzymatically formed 3-aminopropanal as an endogenous mediator of neuronal and glial
cell death," J. Exp. Med. 1998, 188:327-340. CQ also decreases cytokine production by microglial cells in vitro in response to
various irritants.
Giulian, "Microglia and the immune pathology of Alzheimer disease," Am. J. Hum. Genet.
1999, 65:13-18.
[0003] Because some malaria is resistant to CQ, derivative compounds have also been explored.
For example,
US 2006/0074105 to Ware et al. describes certain quinoline and quinazoline derivatives said to be useful in the
treatment of malaria and autoimmune diseases.
[0004] Though CQ and HQ are often used clinically as a first-line therapy in autoimmune
disorders, their efficacy is limited by serious side effects. The most important and
best-characterized toxicity is retinal, where long-term use may lead to "bull's eye
maculopathy" and blindness unless dosing is limited. Cardiac toxicity, although rare,
may also occur, manifesting either as conduction disturbances (e.g., bundle-branch
block) and/or cardiomyopathy in association with congestive heart failure. Electron
microscopy of cardiac and retinal biopsies after long-term CQ or HQ therapy reveals
pathognomonic cytoplasmic inclusion bodies, understood to be a direct consequence
of high drug accumulation in lysosomes (and melanosomes in retina and skin). Remarkably,
CQ is capable of accumulating to mM concentration in skin, retinal, renal, and liver
cells during therapeutic dosing while plasma concentrations remain < 1 µM.
[0005] In
WO 2008/074068 A1, specific heterocyclic compounds are described, as well as processes for their preparation
and their use as pharmaceutical or veterinary agents in particular for the treatment,
amelioration and/or prophylaxis of conditions caused by or associated with unbalanced
metal levels and/or oxidative stress, such as neurological conditions and cellular
proliferative disorders, for example Alzheimer's disease, Parkinson's disease, Huntington's
disease or brain cancer or tumours.
[0006] In
US 2006/074105 A1, specific compositions and methods of inhibiting quinone reductase 2 (QR2) are described.
The methods are described as useful in the treatment of malaria and autoimmune diseases.
The compositions comprise quinoline and quinazoline derivatives. Methods for inhibiting
the activity of QR2 by contacting the enzyme with one or more of the compositions
are also described.
[0007] In
US 2017/226095 A1, the manufacture and use of specific compounds or pharmaceutically acceptable salts
thereof for preventing, inhibiting or treating cancer, AIDS and/or premature aging
is described.
[0008] In
US 2012/040993 A1, multifunctional compounds are described, which comprise two or more functional moieties
selected from: (i) a moiety that imparts an iron chelator function; (ii) a moiety
that imparts a neuroprotective function; (iii) a moiety that imparts combined antiapoptotic,
neuroprotective and/or neurorestorative functions; (iv) a moiety that imparts brain
monoamine oxidase (MAO) inhibition, preferably with little or no MAO inhibition in
liver and small intestine; (v) a moiety that imparts cholinesterase inhibitory function;
and (vi) a moiety that imparts an N-methyl-D-aspartic acid receptor (NMDAR) inhibition,
and pharmaceutically acceptable salts and optical isomers thereof. The multifunctional
compounds are described as useful in the treatment or prevention of diseases, disorders
or conditions that can be prevented and/or treated by iron chelation therapy, and/or
neuroprotection and/or neurorestoration, and/or apoptosis inhibition and/or MAO inhibition
and/or cholinesterase inhibition and/or NMADR inhibition.
[0009] In
US 2015/335635 A1, a method is described for the treatment of a neurological condition in a subject
which comprises administering to a subject in need thereof a therapeutically effect
amount of a specific compound or pharmaceutically acceptable salts, hydrates, or solvates
thereof.
[0010] In
WO 2008/014602 A1, specific quinoline derivatives are described as active CLK-1 inhibitors. Pharmaceutical
compositions comprising such derivatives and methods for the prophylaxis and/or treatment
of disorders or their associated symptoms for which the inhibition of CLK-1 is beneficial
are also described.
[0011] In
US 2011/190342 A1, specific quinoline derivatives as well as their pharmaceutically acceptable salts
are described, as well as a process for the preparation of such compounds. The compounds
are described as being glycine B antagonists and therefore useful for the control
and prevention of various disorders, including neurological disorders.
[0012] In
US 2012/172376 A1, specific heterocyclic compounds are described as useful for inhibiting glycogen
synthase kinase 3 (GSK-3). Compositions containing the compounds, their use for preparing
a medicament for the treatment of a medical disorder susceptible to the treatment
with a compound that modulates, preferably inhibits, the activity of glycogen synthase
kinase 3β, and methods of treatment of medical disorders susceptible to treatment
with a compound that modulates glycogen synthase kinase 3β activity using the compounds
are also described.
[0013] In
WO 2014/066506 A2, specific compounds, pharmaceutical compositions, and methods of using such compounds
to treat or prevent diseases or disorders associated with or mediated by JAMM proteins
are described.
[0014] There remains a need to develop additional aminoquinoline quinone reductase 2 (QR2)
inhibitors, particularly that also have diminished lysosomal accumulation in order
to reduce toxicity.
SUMMARY
[0015] The present invention is defined in the appended claims.
[0016] Provided herein according to some embodiments is a compound of
Formula I:

wherein:
WisN;
X is CR14;
R1 is H or trifluoromethyl;
R2 is NR7R8, OR11, SR12, or alkyl;
R3 is H or OR13;
R4 is H or methoxy;
R5 is H, Cl, or trifluoromethyl;
R6 is H or trifluoromethyl;
R7 is H, C1-5 alkyl, heteroarylalkyl, cycloalkyl, heterocycloalkyl, heterocyclo, aryl, heteroaryl,
ureido, thioureido, alkenyl, alkynyl, amido, amino, alkoxy, alkylamino, alkylphosphonate,
alkylnitrile, alkylhalo, or alkylhalo optionally substituted with C1-5 alkyl, cycloalkyl, cycloalkenyl, heterocycloalkyl, heteroaryl, alkenyl, alkynyl,
amido, alkoxy, alkylamino, alkylhydroxy, halo, hydroxyl, carboxylate, alkylcarboxylate,
acylazido, sulfonamide or alkylhalo;
R8 is H, C1-5 alkyl, cycloalkyl, heterocycloalkyl, aryl, heteroaryl, ureido, thioureido, alkenyl,
alkynyl, amido, amino, alkoxy, alkylamino, alkylphosphonate, alkylnitrile, alkylhalo
or alkylhalo optionally substituted with C1-5 alkyl, cycloalkyl, cycloalkenyl, heterocycloalkyl, heteroaryl, alkenyl, alkynyl,
amido, alkoxy, alkylhydroxy, halo, hydroxyl, carboxylate, alkylcarboxylate, acylazido,
sulfonamide or alkylhalo;
R9 is H, O, C1-5 alkyl, cycloalkyl, heterocycloalkyl, aryl, heteroaryl, alkylamino, alkylnitrile or
alkylphosphonate optionally substituted with C1-5 alkyl, cycloalkyl, heterocycloalkyl, aryl, heteroaryl or alkylamino;
R10 is H, O, C1-5 alkyl, cycloalkyl, heterocycloalkyl, aryl, heteroaryl, alkylamino, alkylnitrile or
alkylphosphonate optionally substituted with C1-5 alkyl, cycloalkyl, heterocycloalkyl, heteroaryl, or alkylamino;
R11 is alkyl, aryl or heteroaryl optionally substituted with alkyl, haloalkyl, aryl or
heteroaryl;
R12 is alkyl, aryl or heteroaryl optionally substituted with alkyl, haloalkyl, aryl or
heteroaryl;
R13 is alkyl or aryl optionally substituted with alkyl or haloalkyl; and
R14 is H or aryl;
or a pharmaceutically acceptable salt thereof,
for use in treating acute neural injury.
[0017] In some embodiments, R
1 is H. In some embodiments, R
2 is NR
7R
8. In some embodiments, R
3 is H. In some embodiments, R
4 is H. In some embodiments, R
5 is Cl. In some embodiments, R
6 is H. In some embodiments, R
7 is H. In some embodiments, R
8 is C
1-5 alkyl substituted with heteroaryl. In some embodiments, R
14 is H.
[0018] In some embodiments, the compound has a positive log D value at approximately pH
4 to pH 5.
[0019] In some embodiments, the compound is a compound of
Formula I(a):

wherein R
7 and R
8 are each independently H or C
1-5 alkyl, wherein said C
1-5 alkyl is optionally substituted with cycloalkyl, heterocycloalkyl, heterocyclo, aryl,
or heteroaryl (which may each be further substituted with any suitable substituent,
e.g., C
1-5 alkyl, cycloalkyl, cycloalkenyl, heterocycloalkyl, heteroaryl, alkenyl, alkynyl,
amido, alkoxy, alkylamino, alkylhydroxy, halo, hydroxyl, carboxylate, alkylcarboxylate,
acylazido, sulfonamide or alkylhalo).
[0020] In some embodiments, one of R
7 and R
8 is hydrogen, and the other is C
1-5 alkyl, wherein said C
1-5 alkyl is optionally substituted with cycloalkyl, heterocycloalkyl, heterocyclo, aryl,
or heteroaryl (which may each be further substituted with any suitable substituent,
e.g., C
1-5 alkyl, cycloalkyl, cycloalkenyl, heterocycloalkyl, heteroaryl, alkenyl, alkynyl,
amido, alkoxy, alkylamino, alkylhydroxy, halo, hydroxyl, carboxylate, alkylcarboxylate,
acylazido, sulfonamide or alkyl halo).
[0021] In some embodiments, the compound has a positive log D value at approximately pH
4 to pH 5.
[0022] Also provided is a compound of
Formula II:

wherein R' is selected from the group consisting of pyridin-2-ylmethyl, pyridin-3-ylmethyl,
1-benzylpiperidin-4-yl, 4-cyano-2,2-diethylbutyl, 2-chlorocyclopentyl, 4-(diethylamino)butan-2-yl,
1-(furan-2-yl)ethyl, 1-cyclopropylethyl, 1-ethylpiperidin-4-yl, 5-amino-2,2-diethylpentyl,
and 2-(diethylphosphoryl)-1 -methylethyl,
or a pharmaceutically acceptable salt thereof,
for use in treating acute neural injury in a subject in need thereof.
[0023] In some embodiments, the compound has a positive log D value at approximately pH
4 to pH 5.
[0024] In some embodiments, the acute neural injury comprises traumatic brain injury. In
some embodiments, the acute neural injury comprises subarachnoid hemorrhage. In some
embodiments, the acute neural injury comprises post-operative cognitive deficit. In
some embodiments, the acute neural injury comprises hypoxic brain injury. In some
embodiments, the acute neural injury comprises ischemic brain injury.
[0025] Also provided is an active compound as taught herein for use in a method of treatment
for an acute neural injury. Further provided is the use of an active compound as taught
herein for the preparation of a medicament for the treatment of an acute neural injury.
In some embodiments, the acute neural injury comprises traumatic brain injury. In
some embodiments, the acute neural injury comprises subarachnoid hemorrhage. In some
embodiments, the acute neural injury comprises post-operative cognitive deficit. In
some embodiments, the acute neural injury comprises hypoxic brain injury. In some
embodiments, the acute neural injury comprises ischemic brain injury.
[0026] Further provided is a compound of
Formula I:

wherein:
WisN;
X is CR14;
R1 is H or trifluoromethyl;
R2 is NR7R8, OR11, SR12, or alkyl;
R3 is H or OR13;
R4 is H or methoxy;
R5 is H, Cl, or trifluoromethyl;
R6 is H or trifluoromethyl;
R7 is H, C1-5 alkyl, heteroarylalkyl, cycloalkyl, heterocycloalkyl, aryl, heterocyclo, heteroaryl,
ureido, thioureido, alkenyl, alkynyl, amido, amino, alkoxy, alkylamino, alkylphosphonate,
alkylnitrile, alkylhalo, or alkylhalo optionally substituted with C1-5 alkyl, cycloalkyl, cycloalkenyl, heterocycloalkyl, heteroaryl, alkenyl, alkynyl,
amido, alkoxy, alkylamino, alkylhydroxy, halo, hydroxyl, carboxylate, alkylcarboxylate,
acylazido, sulfonamide or alkylhalo;
R8 is H, C1-5 alkyl, cycloalkyl, heterocycloalkyl, aryl, heteroaryl, ureido, thioureido, alkenyl,
alkynyl, amido, amino, alkoxy, alkylamino, alkylphosphonate, alkylnitrile, alkylhalo
or alkylhalo optionally substituted with C1-5 alkyl, cycloalkyl, cycloalkenyl, heterocycloalkyl, heteroaryl, alkenyl, alkynyl,
amido, alkoxy, alkylhydroxy, halo, hydroxyl, carboxylate, alkylcarboxylate, acylazido,
sulfonamide or alkylhalo;
R9 is H, O, C1-5 alkyl, cycloalkyl, heterocycloalkyl, aryl, heteroaryl, alkylamino, alkylnitrile or
alkylphosphonate optionally substituted with C1-5 alkyl, cycloalkyl, heterocycloalkyl, aryl, heteroaryl or alkylamino;
R10 is H, O, C1-5 alkyl, cycloalkyl, heterocycloalkyl, aryl, heteroaryl, alkylamino, alkylnitrile or
alkylphosphonate optionally substituted with C1-5 alkyl, cycloalkyl, heterocycloalkyl, heteroaryl, or alkylamino;
R11 is alkyl, aryl or heteroaryl optionally substituted with alkyl, haloalkyl, aryl or
heteroaryl;
R12 is alkyl, aryl or heteroaryl optionally substituted with alkyl, haloalkyl, aryl or
heteroaryl;
R13 is alkyl or aryl optionally substituted with alkyl or haloalkyl; and
R14 is H or aryl;
or a pharmaceutically acceptable salt thereof,
for use in treating vascular dementia.
[0027] In some embodiments, R
1 is H. In some embodiments, R
2 is NR
7R
8. In some embodiments, R
3 is H. In some embodiments, R
4 is H. In some embodiments, R
5 is Cl. In some embodiments, R
6 is H. In some embodiments, R
7 is H. In some embodiments, R
8 is C
1-5 alkyl substituted with heteroaryl. In some embodiments, R
14 is H.
[0028] In some embodiments, the compound has a positive log D value at approximately pH
4 to pH 5.
[0029] In some embodiments, the compound is a compound of
Formula I(a):

wherein R
7 and R
8 are each independently H or C
1-5 alkyl, wherein said C
1-5 alkyl is optionally substituted with cycloalkyl, heterocycloalkyl, heterocyclo, aryl,
or heteroaryl (which may each be further substituted with any suitable substituent,
e.g., C
1-5 alkyl, cycloalkyl, cycloalkenyl, heterocycloalkyl, heteroaryl, alkenyl, alkynyl,
amido, alkoxy, alkylamino, alkylhydroxy, halo, hydroxyl, carboxylate, alkylcarboxylate,
acylazido, sulfonamide or alkyl halo).
[0030] In some embodiments, one of R
7 and R
8 is hydrogen, and the other is C
1-5 alkyl, wherein said C
1-5 alkyl is optionally substituted with cycloalkyl, heterocycloalkyl, heterocyclo, aryl,
or heteroaryl (which may each be further substituted with any suitable substituent,
e
.g., C
1-5 alkyl, cycloalkyl, cycloalkenyl, heterocycloalkyl, heteroaryl, alkenyl, alkynyl,
amido, alkoxy, alkylamino, alkylhydroxy, halo, hydroxyl, carboxylate, alkylcarboxylate,
acylazido, sulfonamide or alkyl halo).
[0031] In some embodiments, the compound has a positive log D value at approximately pH
4 to pH 5.
[0032] Also provided is a compound of
Formula II:

wherein R' is selected from the group consisting of pyridin-2-ylmethyl, pyridin-3-ylmethyl,
1-benzylpiperidin-4-yl, 4-cyano-2,2-diethylbutyl, 2-chlorocyclopentyl, 4-(diethylamino)butan-2-yl,
1-(furan-2-yl)ethyl, 1-cyclopropylethyl, 1-ethylpiperidin-4-yl, 5-amino-2,2-diethylpentyl,
and 2-(diethylphosphoryl)-1-methylethyl,
or a pharmaceutically acceptable salt thereof,
for use in treating vascular dementia in a subject in need thereof.
[0033] In some embodiments, the compound has a positive log D value at approximately pH
4 to pH 5.
[0034] Also provided is an active compound as taught herein for use in a method of treatment
for vascular dementia. Further provided is the use of an active compound as taught
herein for the preparation of a medicament for the treatment of vascular dementia.
[0035] Still further provided is compound of
Formula I:

wherein:
WisN;
X is CR14;
R1 is H or trifluoromethyl;
R2 is NR7R8, OR11, SR12, or alkyl;
R3 is H or OR13;
R4 is H or methoxy;
R5 is H, Cl, or trifluoromethyl;
R6 is H or trifluoromethyl;
R7 is H, C1-5 alkyl, heteroarylalkyl, cycloalkyl, heterocycloalkyl, heterocyclo, aryl, heteroaryl,
ureido, thioureido, alkenyl, alkynyl, amido, amino, alkoxy, alkylamino, alkylphosphonate,
alkylnitrile, alkylhalo, or alkylhalo optionally substituted with C1-5 alkyl, cycloalkyl, cycloalkenyl, heterocycloalkyl, heteroaryl, alkenyl, alkynyl,
amido, alkoxy, alkylamino, alkylhydroxy, halo, hydroxyl, carboxylate, alkylcarboxylate,
acylazido, sulfonamide or alkylhalo;
R8 is H, C1-5 alkyl, cycloalkyl, heterocycloalkyl, aryl, heteroaryl, ureido, thioureido, alkenyl,
alkynyl, amido, amino, alkoxy, alkylamino, alkylphosphonate, alkylnitrile, alkylhalo
or alkylhalo optionally substituted with C1-5 alkyl, cycloalkyl, cycloalkenyl, heterocycloalkyl, heteroaryl, alkenyl, alkynyl,
amido, alkoxy, alkylhydroxy, halo, hydroxyl, carboxylate, alkylcarboxylate, acylazido,
sulfonamide or alkylhalo;
R9 is H, O, C1-5 alkyl, cycloalkyl, heterocycloalkyl, aryl, heteroaryl, alkylamino, alkylnitrile or
alkylphosphonate optionally substituted with C1-5 alkyl, cycloalkyl, heterocycloalkyl, aryl, heteroaryl or alkylamino;
R10 is H, O, C1-5 alkyl, cycloalkyl, heterocycloalkyl, aryl, heteroaryl, alkylamino, alkylnitrile or
alkylphosphonate optionally substituted with C1-5 alkyl, cycloalkyl, heterocycloalkyl, heteroaryl, or alkylamino;
R11 is alkyl, aryl or heteroaryl optionally substituted with alkyl, haloalkyl, aryl or
heteroaryl;
R12 is alkyl, aryl or heteroaryl optionally substituted with alkyl, haloalkyl, aryl or
heteroaryl;
R13 is alkyl or aryl optionally substituted with alkyl or haloalkyl; and
R14 is H or aryl;
or a pharmaceutically acceptable salt thereof,
for use in treating central nervous system (CNS) lupus in a subject in need thereof.
[0036] In some embodiments, R
1 is H. In some embodiments, R
2 is NR
7R
8. In some embodiments, R
3 is H. In some embodiments, R
4 is H. In some embodiments, R
6 is H. In some embodiments, R
7 is H. In some embodiments, R
8 is C
1-5 alkyl substituted with heteroaryl. In some embodiments, R
14 is H.
[0037] In some embodiments, the compound has a positive log D value at approximately pH
4 to pH 5.
[0038] In some embodiments, the compound is a compound of
Formula I(a):

wherein R
7 and R
8 are each independently H or C
1-5 alkyl, wherein said C
1-5 alkyl is optionally substituted with cycloalkyl, heterocycloalkyl, heterocyclo, aryl,
or heteroaryl (which may each be further substituted with any suitable substituent,
e.g., C
1-5 alkyl, cycloalkyl, cycloalkenyl, heterocycloalkyl, heteroaryl, alkenyl, alkynyl,
amido, alkoxy, alkylamino, alkylhydroxy, halo, hydroxyl, carboxylate, alkylcarboxylate,
acylazido, sulfonamide or alkyl halo).
[0039] In some embodiments, one of R
7 and R
8 is hydrogen, and the other is C
1-5 alkyl, wherein said C
1-5 alkyl is optionally substituted with cycloalkyl, heterocycloalkyl, heterocyclo, aryl,
or heteroaryl (which may each be further substituted with any suitable substituent,
e.g., C
1-5 alkyl, cycloalkyl, cycloalkenyl, heterocycloalkyl, heteroaryl, alkenyl, alkynyl,
amido, alkoxy, alkylamino, alkylhydroxy, halo, hydroxyl, carboxylate, alkylcarboxylate,
acylazido, sulfonamide or alkyl halo).
[0040] In some embodiments, the compound has a positive log D value at approximately pH
4 to pH 5.
[0041] Also provided is a compound of
Formula II:

wherein R' is selected from the group consisting of pyridin-2-ylmethyl, pyridin-3-ylmethyl,
1-benzylpiperidin-4-yl, 4-cyano-2,2-diethylbutyl, 2-chlorocyclopentyl, 4-(diethylamino)butan-2-yl,
1-(furan-2-yl)ethyl, 1-cyclopropylethyl, 1-ethylpiperidin-4-yl, 5-amino-2,2-diethylpentyl,
and 2-(diethylphosphoryl)-1-methylethyl,
or a pharmaceutically acceptable salt thereof,
for use in treating CNS lupus in a subject in need thereof.
[0042] In some embodiments, the compound has a positive log D value at approximately pH
4 to pH 5.
Also provided is an active compound as taught herein for use in a method of treatment
for CNS lupus. Further provided is the use of an active compound as taught herein
for the preparation of a medicament for the treatment of CNS lupus.
BRIEF DESCRIPTION OF THE DRAWINGS
[0043]
FIG. 1A-FIG. 1B: FIG. 1A shows a logD graph of chloroquine, and FIG. 1B shows a logD graph of hydroxychloroquine.
The shaded regions in the figures represent the potential range of lysosomal pH encountered
in vivo. At lysosomal pH, the logD of both chloroquine and hydroxychloroquine are substantially
negative, reflecting the accumulated charge of these molecules and their loss of membrane
permeability.
FIG. 2A-FIG. 2E show the logD graphs of Example Compounds A-E, respectively. Note that for each of
the Example Compounds, log D values remain positive at lysosomal pH (between pH 4
and 5).
FIG. 3A-FIG. 3C: FIG. 3A provides diffusion weighted magnetic resonance imaging (DW-MRI) images of
transient middle cerebral artery occlusion (MCAO) stroke evolution in mice at 4 hr
(left) and 24 hr (right). FIG. 3B provides neurological scores (left) and rotorod
assessment (right) with chloroquine (CQ) versus vehicle following MCAO. FIG. 3C shows
cortical (left) and subcortical stroke volumes at three days, comparing Example Compound
E (7C-4MAQ), chloroquine (CQ), QRII null mice, QRII null mice littermates, and vehicle.
FIG. 4 presents the results of rotorod (left) and Morris water maze (right) performance
following TBI, comparing Example Compound E (7C-4MAQ) to chloroquine (CQ) and vehicle.
FIG. 5 shows T2 and susceptibility-weighted images (SWI) of hemorrhage in the right basal
ganglia in the intracranial hemorrhage model.
FIG. 6 shows neuronal apoptosis after deep hypothermic circulatory arrest (DHCA). TUNEL
analysis in cortex and hippocampus 48 hours after DHCA in rats treated with CQ (25mg/kg,
horizontal shaded bar), PBS (equal volume, black bar), QR2 inhibitor 7C-4MAQ (25mg/kg,
vertical shaded bar) or vehicle (50% DMSO, open bar).
FIG. 7 shows neuronal necrosis after DHCA. Acid fuchsin-celestin blue staining in cortex
and hippocampus 48 hours after DHCA in rats treated with CQ (25mg/kg, horizontal shaded
bar), PBS (equal volume, black bar), QR2 inhibitor 7C-4MAQ (25mg/kg, vertical shaded
bar) or vehicle (50% DMSO, open bar).
FIG. 8 shows neurological outcome analyzed by neuroscore on postoperative days (POD) 1 and
2 in rats treated with QR2 inhibitor 7C-4MAQ (25mg/kg, open bar) or 50% DMSO (solid
bar) 2 hours before CPOB/DHCA.
FIG. 9 shows global brain perfusion as measured by MRI ADC-perfusion. A, ADC-perfusion intensity
of sham mice compared to a pooled group of all mice with BCAS at day three and 32.
100% perfusion was defined as average ADC-perfusion intensity of sham group. Perfusion
of BCAS mice (n=17) was significantly less than sham mice (n=5) at day three (**p
< 0.01), but perfusion rebounded to normal levels by day 32. B, representative colorized
ADC-perfusion MR sequence superimposed onto a greyscale coronal T2 weighted sequence
three days following BCAS surgery. Note the increased perfusion (increased ADC-perfusion
signal intensity) in the sham brain compared to other treatment groups. C, ADC-perfusion
at day three and 32 by treatment group. Perfusion in the sham group (n = 5) was significantly
higher than all other groups on day three (p < 0.05, group effect; Sham×N-MCQ, n =
4, p < 0.01; Sham×CQ, n = 5, p < 0.01; Sham×Vehicle, n = 9, p < 0.05).Values represent
averages ±SEM. *p < 0.05, **p < 0.01.
FIG. 10 shows learning performance on the Morris water maze (MWM). A, escape latency. Mice
administered 7C-4MAQ ("N-MCQ") (n=10) exhibited decreased escape latencies compared
to vehicle controls (Vehicle, n=10; p < 0.05, group effect; p < 0.01, N-MCQ×Vehicle),
and were indistinguishable from sham mice (Sham, n = 14). After the 5th day of MWM
testing, the submerged platform was made visible and all difference between groups
disappeared. B, escape latency. Animals administered CQ (n = 10) had a performance
profile similar to their N-MCQ counterparts (p < 0.05, group effect; p < 0.001, CQ×Vehicle).
C, probe trial. Mice administered N-MCQ spent significantly more time in the target
quadrant compared to all other treatment groups (p < 0.05, group effect). D, swim
speed. No differences in swim speed were observed by treatment group. Values represent
averages ±SEM. *p < 0.05, **p < 0.01, ***p < 0.001.5, p < 0.01; Sham×Vehicle, n =
9, p < 0.05).Values represent averages ±SEM. *p < 0.05, **p < 0.01.
FIG. 11 shows that aminoquinolines decrease microgliosis and astrocytosis in WM tracts of
BCAS mice. A, representative Iba-1 and GFAP staining of the medial CC (bregma = 0
mm) at day three. B, Iba-1 immuno-positive cell density in multiple WM tracts at day
three and 32. Vehicle controls (n = 9) had a significantly higher density of Iba-1
positive cells in multiple WM tracts at day three and 32 compared to other treatment
groups (n = 5). C, GFAP immuno-positive cell density. Vehicle controls had a significantly
higher density of GFAP positive cells in the CC at day three and 32 compared to all
other treatment groups. Values represent averages ±SEM. *p < 0.05, **p < 0.01, ***p
< 0.001. positive cells in the CC at day three and 32 compared to all other treatment
groups. Values represent averages ±SEM. *p < 0.05, **p < 0.01, ***p < 0.001.
FIG. 12 shows that inhibition of QR2 decreases oxidative stress in WM tracts of BCAS mice.
The vehicle group (n = 9) exhibited significantly higher 8-OhdG staining density than
all other treatment groups (CQ, n = 8; N-MCQ, n = 7; Vehicle, n = 9) on day 32 in
the IC, and a higher density than sham and N-MCQ groups in the CC on day three. Values
represent averages ±SEM. *p < 0.05, **p < 0.01, ***p < 0.001.
DETAILED DESCRIPTION
[0044] Provided herein are compounds for use in treating acute neural injury, vascular dementia
or CNS lupus. In some embodiments, quinoline and quinazoline derivatives useful in
inhibiting quinone reductase 2 (QR2) are provided for such treatment.
[0045] As used herein in the description of the invention and the appended claims, the singular
forms "a," "an" and "the" are intended to include the plural forms as well, unless
the context clearly indicates otherwise. As used herein in the description of the
invention and the appended claims, the singular forms "a," "an" and "the" are intended
to include the plural forms as well, unless the context clearly indicates otherwise.
Furthermore, the terms "about" and "approximately" as used herein when referring to
a measurable value such as an amount of a compound, dose, time, temperature, and the
like, is meant to encompass variations of 20%, 10%, 5%, 1%, 0.5%, or even 0.1% of
the specified amount. Also, as used herein, "and/or" and "/" refer to and encompass
any and all possible combinations of one or more of the associated listed items, as
well as the lack of combinations when interpreted in the alternative ("or").
I. Definitions
[0046] The following definitions are used herein.
[0047] As known in the art, "H" refers to a hydrogen atom. "C" refers to a carbon atom.
"N" refers to a nitrogen atom. "O" refers to an oxygen atom.
[0048] "Halo" refers to F, Cl, Br or I. "Cl" is chloro, "I" is iodo, "F" is fluoro, and
"Br" is bromo.
[0049] An "acyl" is a group -C(O)R, where R is a suitable substituent (for example, an acetyl
group, a propionyl group, a butyroyl group, a benzoyl group, or an alkylbenzoyl group).
[0050] "Alkyl," as used herein, refers to a straight or branched chain saturated hydrocarbon
containing from 1 or 2 to 10 or 20 or more carbon atoms (e.g., C2, C3, C4, C5, C6,
C7, C8, C9, C10, C 11, C12, C13, C14, C15, etc.). Representative examples of alkyl
include, but are not limited to, methyl, ethyl, n-propyl, iso-propyl, n-butyl, sec-butyl,
iso-butyl, tert-butyl, n-pentyl, isopentyl, neopentyl, n-hexyl, 3-methylhexyl, 2,2-dimethylpentyl,
2,3-dimethylpentyl, n-heptyl, n-octyl, n-nonyl, n-decyl, and the like. In some embodiments,
the alkyl is a "lower alkyl" having from 1 to 3, 4, or 5 carbon atoms.
[0051] "Alkenyl" as used herein is a straight or branched chain unsaturated hydrocarbon
group having one or more double bonds.
[0052] "Alkynyl" as used herein is a straight or branched chain unsaturated hydrocarbon
group having one or more triple bonds.
[0053] "Amino" is the group -NH
2. An "amide" or "amido" as used herein refers to an organic functional group having
a carbonyl group (C=O) linked to a nitrogen atom (N). "Alkylamino" refers to an alkyl
group, as defined herein, appended to the parent molecule through a nitrogen atom
(-NH-).
[0054] "Alkoxy," as used herein, refers to an alkyl group, as defined herein, appended to
the parent molecule through an oxygen atom (-O-). Representative examples of alkoxy
include, but are not limited to, methoxy, ethoxy, propoxy, 2-propoxy, butoxy, tert-butoxy,
pentyloxy, hexyloxy and the like.
[0055] "Aryl" as used herein refers to a ring system having one or more aromatic rings.
Representative examples of aryl include azulenyl, indanyl, indenyl, naphthyl, phenyl,
tetrahydronaphthyl, and the like. The aryl groups of this invention can be substituted
with 1, 2, 3, 4, or 5 substituents independently selected from alkenyl, alkenyloxy,
alkoxy, alkoxyalkoxy, alkoxycarbonyl, alkyl, alkylcarbonyl, alkylcarbonyloxy, alkylsulfinyl,
alkylsulfonyl, alkylthio, alkynyl, aryl, aryloxy, azido, arylalkoxy, arylalkyl, aryloxy,
carboxy, cyano, formyl, halo, haloalkyl, haloalkoxy, hydroxy, hydroxyalkyl, mercapto,
nitro, sulfamyl, sulfo, sulfonate, NR'R" (wherein, R' and R" are independently selected
from hydrogen, alkyl, alkylcarbonyl, aryl, arylalkyl and formyl), and -C(O)NR'R" (wherein
R' and R" are independently selected from hydrogen, alkyl, alkylcarbonyl, aryl, arylalkyl,
and formyl).
[0056] "Cycloalkyl" refers to a monocyclic or fused polycyclic C3 to C10 saturated hydrocarbon
groups. "Heterocycloalkyl" refers to a cycloalkyl group in which one or more carbon
atoms have been replaced with atoms independently selected from the group consisting
of: O, N, and S.
[0057] "Haloalkyl," as used herein, a refers to a straight or branched chain hydrocarbon
containing from 1 or 2 to 10 or 20 or more carbon atoms
(e.g., C2, C3, C4, C5, C6, C7, C8, C9, C10, C11, C12, C13, C14, C15, etc.) in which at least
one of the hydrogen atoms have been replaced with halo (F, Cl, Br or I). Representative
examples of "haloalkyl" include, but are not limited to, fluoroalkyl (e.g., fluoromethyl
(-CH
2F), difluoromethyl (-CHF
2), or trifluoromethyl (-CF
3)).
[0058] "Heterocyclo," as used herein, refers to a monocyclic, bicyclic or tricyclic ring
system containing at least one heteroatom selected from O, N, and S. Monocyclic heterocycle
ring systems are exemplified by any 5 or 6 member ring containing 1, 2, 3, or 4 heteroatoms
independently selected from the group consisting of O, N, and S. The 5 member ring
has from 0 to 2 double bonds, and the 6 member ring has from 0 to 3 double bonds.
Representative examples of monocyclic ring systems include, but are not limited to,
azetidine, azepine, aziridine, diazepine, 1,3-dioxolane, dioxane, dithiane, furan,
imidazole, imidazoline, imidazolidine, isothiazole, isothiazoline, isothiazolidine,
isoxazole, isoxazoline, isoxazolidine, morpholine, oxadiazole, oxadiazoline, oxadiazolidine,
oxazole, oxazoline, oxazolidine, piperazine, piperidine, pyran, pyrazine, pyrazole,
pyrazoline, pyrazolidine, pyridine, pyrimidine, pyridazine, pyrrole, pyrroline, pyrrolidine,
tetrahydrofuran, tetrahydrothiophene, tetrazine, tetrazole, thiadiazole, thiadiazoline,
thiadiazolidine, thiazole, thiazoline, thiazolidine, thiophene, thiomorpholine, thiomorpholine
sulfone, sulfoxide, thiopyran, triazine, triazole, trithiane, and the like. Bicyclic
ring systems are exemplified by any of the above monocyclic ring systems fused to
an aryl group as defined herein, a cycloalkyl group as defined herein, or another
monocyclic ring system as defined herein. Representative examples of bicyclic ring
systems include but are not limited to, for example, benzimidazole, benzothiazole,
benzothiadiazole, benzothiophene, benzoxadiazole, benzoxazole, benzofuran, benzopyran,
benzothiopyran, benzodioxine, 1,3-benzodioxole, cinnoline, indazole, indole, indoline,
indolizine, naphthyridine, isobenzofuran, isobenzothiophene, isoindole, isoindoline,
isoquinoline, phthalazine, pyranopyridine, quinoline, quinolizine, quinoxaline, quinazoline,
tetrahydroisoquinoline, tetrahydroquinoline, thiopyranopyridine, and the like. Examples
of nitrogen-containing heterocyclo include, but are not limited to, pyrrolidinyl,
piperidinyl, piperazinyl, morpholinyl, etc.
[0059] "Heteroaryl" means a cyclic, aromatic hydrocarbon in which one or more carbon atoms
have been replaced with atoms independently selected from the group consisting of
O, N, and S. Examples of heteroaryl groups include pyridyl, pyrimidinyl, imidazolyl,
thienyl, furyl, pyrazinyl, pyrrolyl, pyranyl, isobenzofuranyl, chromenyl, xanthenyl,
indolyl, isoindolyl, indolizinyl, triazolyl, pyridazinyl, indazolyl, purinyl, quinolizinyl,
isoquinolyl, quinolyl, phthalazinyl, naphthyridinyl, quinoxalinyl, isothiazolyl, and
benzo[b]thienyl. Preferred heteroaryl groups are five and six membered rings and contain
from one to three heteroatoms independently selected from the group consisting of
O, N, and S. The heteroaryl group, including each heteroatom, can be unsubstituted
or substituted with from 1 to 4 suitable substituents, as chemically feasible. For
example, the heteroatom S may be substituted with one or two oxo groups, which may
be shown as =O. Examples of nitrogen-containing heteroaryls include, but are not limited
to, pyridinyl, pyrimidinyl, pyrazinyl, pyridazinyl, imidazolyl, pyrrolyl, pyrazolyl,
thiazolyl, triazolyl, isothiazolyl, indolyl, benzimidazolyl, benzoxazolyl, quinolinyl,
isoquinolinyl, quinazolinyl, acridinyl, carbazole, azepinyl, 1,4-diazepinyl, purinyl,
pteridinyl, phthalazinyl, etc.
[0060] "Hydroxyl" and "hydroxy" refer to the group -OH.
[0061] "Nitrile" refers to the group -CN.
[0062] "Nitro" refers to the group -NO
2.
[0063] A "sulfone" refers to a sulfonyl functional group, -SO
2R, wherein R is any covalently linked atom or atoms.
[0064] A "sulfoxide" refers to the group -S(O)R, wherein R is any covalently linked atom
or atoms.
[0065] A "thiol" or "mercapto" refers to the group -SH or to its tautomer =S.
[0066] A "ureido" refers to the group -NHCONH
2. A "thioureido" refers to the group -NHCSNH
2.
[0067] A "pharmaceutically acceptable salt" is a salt that retains the biological effectiveness
of the free acids and bases of a specified compound and that is not biologically or
otherwise undesirable. Examples of pharmaceutically acceptable salts include, but
are not limited to, sulfates, pyrosulfates, bisulfates, sulfites, bisulfites, phosphates,
monohydrogenphosphates, dihydrogenphosphates, metaphosphates, pyrophosphates, chlorides,
bromides, iodides, acetates, propionates, decanoates, caprylates, acrylates, formates,
isobutyrates, caproates, heptanoates, propiolates, oxalates, malonates, succinates,
suberates, sebacates, fumarates, maleates, butyne-1,4-dioates, hexyne-1,6-dioates,
benzoates, chlorobenzoates, methylbenzoates, dinitrobenzoates, hydroxybenzoates, methoxybenzoates,
phthalates, sulfonates, xylenesulfonates, phenylacetates, phenylpropionates, phenylbutyrates,
citrates, lactates, γ-hydroxybutyrates, glycollates, tartrates, methane-sulfonates,
propanesulfonates, naphthalene-1-sulfonates, naphthalene-2-sulfonates, and mandelates.
[0068] A "prodrug" as known in the art is a compound that can be converted under physiological
conditions or by solvolysis or metabolically to a specified compound that is pharmaceutically
active. A thorough discussion is provided in
T. Higuchi and V. Stella, Prodrugs as Novel delivery Systems, Vol. 14 of the A.C.S.
Symposium Series and in Edward B. Roche, ed., Bioreversible Carriers in Drug Design,
American Pharmaceutical Association and Pergamon Press, 1987.
See also US Patent No. 6,680,299. Examples include a prodrug that is metabolized
in vivo by a subject to an active compound as described herein, wherein the prodrug is an
ester of an alcohol or carboxylic acid group, if such a group is present in the compound;
an acetal or ketal of an alcohol group, if such a group is present in the compound;
an N-Mannich base or an imine of an amine group, if such a group is present in the
compound; or a Schiff base, oxime, acetal, enol ester, oxazolidine, or thiazolidine
of a carbonyl group, if such a group is present in the compound, such as described
in
US Patent No. 6,680,324 and
US Patent No. 6,680,322.
[0069] As understood in the art, the term "optionally substituted" indicates that the specified
group is either unsubstituted, or substituted by one or more suitable substituents.
A "substituent" that is "substituted" is a group which takes the place of a hydrogen
atom on the parent organic molecule.
II. Active Compounds
[0070] Provided herein as an active compound according to some embodiments is a compound
of
Formula I:

wherein:
WisN;
X is CR14;
R1 is H or trifluoromethyl;
R2 is NR7R8, OR11, SR12, or alkyl;
R3 is H or OR13;
R4 is H or methoxy;
R5 is H, Cl, or trifluoromethyl;
R6 is H or trifluoromethyl;
R7 is H, C1-5 alkyl, heteroarylalkyl, cycloalkyl, heterocycloalkyl, heterocyclo, aryl, heteroaryl,
ureido, thioureido, alkenyl, alkynyl, amido, amino, alkoxy, alkylamino, alkylphosphonate,
alkylnitrile, alkylhalo, or alkylhalo optionally substituted with C1-5 alkyl, cycloalkyl, cycloalkenyl, heterocycloalkyl, heteroaryl, alkenyl, alkynyl,
amido, alkoxy, alkylamino, alkylhydroxy, halo, hydroxyl, carboxylate, alkylcarboxylate,
acylazido, sulfonamide or alkyl halo;
R8 is H, C1-5 alkyl, cycloalkyl, heterocycloalkyl, aryl, heteroaryl, ureido, thioureido, alkenyl,
alkynyl, amido, amino, alkoxy, alkylamino, alkylphosphonate, alkylnitrile, alkylhalo
or alkylhalo optionally substituted with C1-5 alkyl, cycloalkyl, cycloalkenyl, heterocycloalkyl, heteroaryl, alkenyl, alkynyl,
amido, alkoxy, alkylhydroxy, halo, hydroxyl, carboxylate, alkylcarboxylate, acylazido,
sulfonamide or alkylhalo;
R9 is H, O, C1-5 alkyl, cycloalkyl, heterocycloalkyl, aryl, heteroaryl, alkylamino, alkylnitrile or
alkylphosphonate optionally substituted with C1-5 alkyl, cycloalkyl, heterocycloalkyl, aryl, heteroaryl or alkylamino;
R10 is H, O, C1-5 alkyl, cycloalkyl, heterocycloalkyl, aryl, heteroaryl, alkylamino, alkylnitrile or
alkylphosphonate optionally substituted with C1-5 alkyl, cycloalkyl, heterocycloalkyl, heteroaryl, or alkylamino;
R11 is alkyl, aryl or heteroaryl optionally substituted with alkyl, haloalkyl, aryl or
heteroaryl;
R12 is alkyl, aryl or heteroaryl optionally substituted with alkyl, haloalkyl, aryl or
heteroaryl;
R13 is alkyl or aryl optionally substituted with alkyl or haloalkyl; and
R14 is H or aryl;
or a pharmaceutically acceptable salt thereof.
[0071] In some embodiments of Formula I, R
1 is H. In some embodiments of Formula I, R
2 is NR
7R
8. In some embodiments of Formula I, R
3 is H. In some embodiments of Formula I, R
4 is H. In some embodiments of Formula I, R
5 is Cl. In some embodiments of Formula I, R
6 is H. In some embodiments of Formula I, R
7 is H. In some embodiments of Formula I, R
8 is C
1-5 alkyl substituted with heteroaryl. In some embodiments of Formula I, R
14 is H.
[0072] In some embodiments of
Formula I, the compound is a compound of
Formula I(a):

wherein R
7 and R
8 are each independently H or C
1-5 alkyl, wherein said C
1-5 alkyl is optionally substituted with cycloalkyl, heterocycloalkyl, heterocyclo, aryl,
or heteroaryl (which may each be further substituted with any suitable substituent,
e.g., C
1-5 alkyl, cycloalkyl, cycloalkenyl, heterocycloalkyl, heteroaryl, alkenyl, alkynyl,
amido, alkoxy, alkylamino, alkylhydroxy, halo, hydroxyl, carboxylate, alkylcarboxylate,
acylazido, sulfonamide or alkyl halo).
[0073] In some embodiments of Formula I(a), one of R
7 and R
8 is hydrogen, and the other is C
1-5 alkyl, wherein said C
1-5 alkyl is optionally substituted with cycloalkyl, heterocycloalkyl, heterocyclo, aryl,
or heteroaryl (which may each be further substituted with any suitable substituent,
e.g., C
1-5 alkyl, cycloalkyl, cycloalkenyl, heterocycloalkyl, heteroaryl, alkenyl, alkynyl,
amido, alkoxy, alkylamino, alkylhydroxy, halo, hydroxyl, carboxylate, alkylcarboxylate,
acylazido, sulfonamide or alkyl halo).
[0074] In some embodiments of
Formula I, the compound is:

4-{2-[(7-chloroquinolin-4-yl)amino]ethyl}phenol,

7-chloro-N-(pyridin-2-yl)quinolin-4-amine ,

7-chloro-N-(pyridin-3-yl)quinolin-4-amine , or

7-chloro-N-methylquinolin-4-amine
or a pharmaceutically acceptable salt thereof.
[0075] In some embodiments of
Formula I, the compound is:

7-chloro-N-methylquinolin-4-amine ,
or a pharmaceutically acceptable salt thereof.
[0076] Further provided herein as an active compound is a compound of
Formula II:

wherein R' is selected from the group consisting of pyridin-2-ylmethyl, pyridin-3-ylmethyl,
1-benzylpiperidin-4-yl, 4-cyano-2,2-diethylbutyl, 2-chlorocyclopentyl, 4-(diethylamino)butan-2-yl,
1-(furan-2-yl)ethyl, 1-cyclopropylethyl, 1-ethylpiperidin-4-yl, 5-amino-2,2-diethylpentyl,
and 2-(diethylphosphoryl)-1-methylethyl,
or a pharmaceutically acceptable salt thereof.
[0077] In some embodiments of
Formula II, the compound is:

6-methoxy-N-(pyridin-2-ylmethyl)quinolin-8-amine , or

N-[1-(furan-2-yl)ethyl]-6-methoxyquinolin-8-amine ,
or a pharmaceutically acceptable salt thereof.
[0079] In some embodiments of the above compound of Formula I or Formula II, the compound
has a positive log D value at approximately pH 4 to pH 5.
[0080] Unless otherwise stated, structures depicted herein are also meant to include all
enantiomeric, diastereomeric, and geometric (or conformational) forms of the structure;
for example, the R and S configurations for each asymmetric center, (Z) and (E) double
bond isomers, and (Z) and (E) conformational isomers. Therefore, single stereochemical
isomers as well as enantiomeric, diastereomeric, and geometric (or conformational)
mixtures of the present compounds are within the scope of the invention. Unless otherwise
stated, all tautomeric forms of the compounds of the invention are within the scope
of the invention. Tautomeric forms include keto-enol tautomers of a compound. In addition,
unless otherwise stated, all rotamer forms of the compounds of the invention are within
the scope of the invention. Unless otherwise stated, structures depicted herein are
also meant to include compounds that differ only in the presence of one or more isotopically
enriched atoms. For example, compounds having the present structures except for the
replacement of hydrogen by deuterium or tritium, or the replacement of a carbon by
a
13C- or
14C-enriched carbon are within the scope of this invention. Such compounds are useful,
for example, as analytical tools or probes in biological assays.
III. Methods of Use
[0081] As noted above, active compounds as taught herein are useful for treatment of acute
neural injury, vascular dementia or CNS lupus.
[0082] Acute neural injury includes, but is not limited to, traumatic brain injury and non-traumatic
acute brain injury. Traumatic brain injury, as known in the art, is damage and/or
dysfunction of the brain caused by a single or repetitive external mechanical force,
such as blunt force or sheer force from sudden acceleration or deceleration. Traumatic
brain injury includes, but is not limited to, concussion, contusion, and hemorrhage,
including parenchymal, subdural, epidural, and subarachnoid hemorrhage. Other acute
neural injuries include insult from hypoxic or ischemic brain injury, e.g., from arterial
stroke (focal, global), venous infarction, infection, perioperative cerebral injury,
etc.
[0083] Vascular dementia is dementia or cognitive deficit caused by acute cerebrovascular
compromise, often associated with multiple cerebrovascular events such as strokes.
[0084] Central nervous system lupus (CNS lupus) refers to neurological and/or behavioral
clinical syndromes in subjects with systemic lupus erythematosus (SLE). CNS lupus
may present clinically as acute confusion, fatigue, headache, subtle cognitive impairment,
delirium, coma, dementia, sensory/motor/autonomic deficits, and/or seizures (the latter
which occur more frequently in lupus patients than the general population). CNS lupus
may also present as psychological disorders such as depression, mania, and/or psychosis.
More focal neurological deficits are also possible and may occur secondary to lupus-related
embolic, thrombotic or vasculitic infarction of brain and spine as well as cranial
neuropathies. Pathophysiological mechanisms of CNS lupus may include cerebritis, transverse
myelitis, neuritis and stroke (embolic, thrombotic, or vasculitic) of the brain or
spine.
[0085] The term "treat" as used herein refers to any type of treatment that imparts a benefit
to a subject afflicted with or at risk of an injury, disease or disorder (e.g., improvement
or decreased risk of developing one or more symptoms such as cognitive dysfunction
and/or motor dysfunction), delay in the progression of the injury or symptoms, etc.
[0086] The present invention is primarily concerned with the treatment of human subjects,
but the invention may also be carried out on animal subjects, particularly mammalian
subjects such as mice, rats, dogs, cats, livestock and horses for veterinary purposes,
and/or for drug screening and/or drug development purposes.
IV. Formulations
[0087] In some embodiments, active compound(s) may be provided in a pharmaceutically acceptable
carrier. Carriers should be acceptable in that they are compatible with any other
ingredients of the formulation and not harmful to the recipient thereof. In some embodiments,
the pharmaceutically acceptable carrier is a sterile (e.g., endotoxin-free or pyrogen-free
water, or endotoxin-free or pyrogen-free water saline).
[0088] Formulations of the present invention may include short-term, rapid-onset, rapid-offset,
controlled release, sustained release, delayed release, and pulsatile release formulations,
providing the formulations achieve administration of a compound as described herein.
See
Remington's Pharmaceutical Sciences (18th ed.; Mack Publishing Company, Eaton, Pa.,
1990).
[0089] Pharmaceutical formulations according to the present invention may be suitable for
various modes of delivery, including oral, parenteral (including intravenous, intramuscular,
subcutaneous, intradermal, and transdermal), topical (including dermal, buccal, and
sublingual), and rectal administration.
[0090] Examples of suitable dosage unit forms in accordance with this invention are tablets,
capsules, orally administered liquid preparations in suitable liquid vehicles, sterile
preparations in suitable liquid vehicles for intramuscular and intravenous administration,
suppositories, and sterile dry preparations for the extemporaneous preparation of
sterile injectable preparations in a suitable pharmaceutically acceptable carrier.
Suitable solid diluents or carriers for the solid oral pharmaceutical dosage unit
forms may be selected from the group consisting of lipids, carbohydrates, proteins
and mineral solids; for example, starch, sucrose, kaolin, dicalcium phosphate, gelatin,
acacia, corn starch, talc, and the like. Capsules, both hard and soft, may be formulated
with suitable diluents and excipients; for example, edible oils, talc, calcium carbonate,
and the like, and also, calcium stearate. Liquid preparations for oral administration
may be prepared in water or aqueous solutions containing suspending agents; for example,
sodium carboxymethylcellulose, methylcellulose, acacia, polyvinyl pyrrolidone, polyvinyl
alcohol and the like. In some embodiments, preservatives may be included, for example,
parabens, chlorobutanol, benzyl alcohol phenol, and the like.
See U.S. Patent No. 4,159,331 to McCall.
[0091] The amount of active compound(s) administered for therapeutic treatment may depend
on the age, weight, and condition of the patient as determined by a physician. In
some embodiments, the administration and/or pharmaceutical dosage unit form may provide
from about 0.05 mg to about 100 mg of the active compound(s) per dosage. In some embodiments,
active compound(s) are provided an amount of from about 1 microgram per kg to about
1 g per kg of body weight of the recipient, or 10 micrograms to 100 mg per kg, or
0.1 mg to 50 mg per kg of body weight.
[0092] The present invention is explained in greater detail in the following non-limiting
examples.
EXAMPLES
Example 1: Development of non-lysosomotropic aminoquinoline inhibitors of QR2
[0093] Chloroquine and hydroxychloroquine are lysosomotropic drugs that accumulate preferentially
in cellular lysosomes. Their structures are:

[0094] For chloroquine, the pKa of the tertiary amine nitrogen is 10.32 and that of the
quinoline nitrogen is 7.29. At acidic lysomal pHs between 4 and 5.5, nearly 100% of
chloroquine is therefore doubly protonated, rendering the molecule with a 2+ charge
that makes the molecule strongly hydrophilic, membrane impermeable, and thus trapped
in the acidic organelle.
[0095] A quantitative treatment of this trapping phenomenon can be obtained by examining
the octanol-water distribution coefficient, log D, of a drug, which depicts the relative
partition properties for all forms of a compound at different pH. Compounds with positive
logD for a given pH are relatively lipophilic and more membrane permeable, whereas
compounds with a negative logD are hydrophilic and less membrane permeable.
[0096] FIG. 1A shows the logD of chloroquine, and
FIG. 1B shows the logD of hydroxychloroquine. The shaded regions in the figures represent
the potential range of lysosomal pH encountered
in vivo. At lysosomal pH, the logD of both chloroquine and hydroxychloroquine are substantially
negative, reflecting the accumulated charge of these molecules and their loss of membrane
permeability.
[0097] A chemoproteomic strategy was used to generate a chemical library of 4-aminoquinoline
scaffolds with selectivity for QR2. Using an array of chemi-informatics tools, we
have mined this library
in silico and have identified aminoquinoline derivatives with nanomolar to micromolar inhibition
of QR2 that also possess chemical properties avoiding lysosomal accumulation, thereby
addressing the mechanism responsible for CQ/HQ's most common toxicities.
[0098] Example compounds as provided below, and their respective log D predictions are shown
in
FIGS. 2A-2E. Note that regardless of acidity, log D values remain positive (> 0.5) for each compound,
indicating that these molecules will retain lipophilicity (and thus membrane permeability)
at lysosomal pH (between pH 4 and 5).
Example Compound A (logD shown in FIG. 2A):
[0099]

4-{2-[(7-chloroquinolin-4-yl)amino]ethyl}phenol
Example Compound B (logD shown in FIG. 2B):
[0100]

6-methoxy-N-(pyridin-2-ylmethyl)quinolin-8-amine
Example Compound C (logD shown in FIG. 2C):
[0101]

N-[1-(furan-2-yl)ethyl]-6-methoxyquinolin-8-amine
Example Compound D (logD shown in FIG. 2D):
[0102]

7-chloro-N-(pyridin-2-yl)quinolin-4-amine
Example Compound E (logD shown in FIG. 2E):
[0103]

7-chloro-N-methylquinolin-4-amine
Example Compound F:
[0104]

7-chloro-N-(pyridin-3-yl)quinolin-4-amine
[0105] Table 1 below presents additional estimates of drug-likeness of these non-lysosomotropic
4-aminoquinolines as compared to chloroquine (CQ). Lipophilic efficiency, LiPE (also
known as ligand lipophilicity efficiency) is a drug design and discovery parameter
linking potency with lipophilicity. LiPE is defined as the pIC
50 (-log IC
50) minus the calculated log P, clog P:

LiPE is used to estimate
in vivo drug specificity, with higher values predictive of increased potency and decreased
probability for unwanted or off-target interactions. LiPE for many of the disclosed
4-aminoquinoline QR2 inhibitors are higher than CQ, therefore predicting a better
toxicity profile than CQ has, independent of the substantially reduced toxicity anticipated
through elimination of lysosomotropism.
Table 1: Empiric and calculated parameters of drug-likeness for 4-aminoquinoline inhibitors
of QR2.
| Compound |
IC50 (µM) mean +/- SD |
clog P |
LiPE (pIC50 - clogP) |
| chloroquine |
1.13 +/-0.8 |
3.93 |
2.01 |
| 4-{2-[(7-chloroquinolin-4-yl)amino]ethyl}phenol |
2.7 +/- 0.2 |
3.92 |
1.65 |
| 6-methoxy-N-(pyridin-2-ylmethyl)quinolin-8-amine |
0.47 +/- 0.26 |
2.03 |
4.30 |
| N-[1-(furan-2-yl)ethyl]-6-methoxyquinolin-8-amine |
0.85 +/- 0.15 |
2.65 |
3.42 |
| 7-chloro-N-(pyridin-2-yl)quinolin-4-amine |
0.55 +/-0.03 |
3.55 |
2.71 |
| 7-chloro-N-methylquinolin-4-amine |
0.13 +/- 0.03 |
2.21 |
4.67 |
Example 2: 7-Chloro Compound Synthesis and Characterization
[0106]

[0107] A suspension of 4,7-dichloroquinoline (2.0g, 10.2 mmol) in aqueous methylamine (40%
20 mL 260 mmol, 26 eq.) was heated in a microwave vessel at 90 °C (initial power setting
of 150W) for 2h. Analysis of the reaction mixture by TLC (2% MeOH in CH
2Cl
2) indicated complete consumption of starting material. The reaction mixture was diluted
with H
2O (100 mL) and insoluble were collected at the vacuum. The filter cake was washed
with H
2O and dried in vacuo giving the pure product as a white micro crystalline solid (1.8g,
92%).
1H NMR (DMSO-
d6, 300 MHz) δ 8.40 (d, J = 5.1 Hz, 1H), 8.16 (d, J = 9.0 Hz, 1H), 7.77 (s, 1H), 6.38
(d, J = 5.4 Hz, 1H), 2.86 (d, J = 5.4 Hz, 3H). ESIMS:
m/
z = 193 [(M+H)
+].

[0108] General procedure for 7-substituted-4-(pyridin-3-yl)-methylaminoquinolines. A mixture of the 7-substituted-4-chloroquinoline (5.1 mmol), 3-aminomethyl pyridine
(0.70 g, 6.2 mmol, 1.2 eq.) and 1-butanol (5 mL) were heated in a sealed heavy walled
pressure vessel (12 mL) at 130 °C (bath temperature) for 24h. The vessel was cooled
to room temperature and the contents were diluted into Et
2O (150 mL). Insolubles were removed at the vacuum. The filter cake was dissolved in
a minimum amount of MeOH and the resulting solution was added to silica gel (~3g).
The mixture was concentrated to dryness under reduced pressure. Flash column chromatography
(RediSepRf SiO
2 (40 g), 100% CH
2Cl
2→75% (90:10, CH
2Cl
2:MeOH containing 10% NH
3) gave the desired products.
[0109] X = Cl (white solid, 0.92 g, 67%).
[0110] 1H NMR (DMSO-
d6, 400 MHz) δ 8.61 (s, 1H), 8.42 (s, 1H), 8.27 (m, 2H), 8.00 (s, 1H), 7.75 (m, 2H),
7.46 (d, J = 8.8 Hz, 1H), 7.31 (m, 3H), 6.39 (d, J = 5.4 Hz, 1H), 4.55 (d, J = 5.4
Hz, 2H). ESIMS:
m/
z = 270 [(M+H)
+].
Example 3: Evidence for the protective role of QR2 inhibition in cerebral infarction
and therapeutic effectiveness of non-lysosomotropic inhibitors of QR2.
[0111] The neuroprotective efficacy of chloroquine (CQ) was demonstrated in a mouse model
of transient middle cerebral artery (MCA) occlusion. Post-mortem histological assessments
at 72 hours show that a single i.p. administration of CQ (25 mg/kg) 90 minutes after
ischemia onset results in a 55% reduction in overall stroke volume, with corresponding
reduction in stroke evolution between 4 and 24 hours as measured by diffusion weighted
magnetic resonance imaging (DW-MRI), and improvement in neurological score and motor
function, as shown in
FIGS. 3A-3C.
[0112] Also tested was the neuroprotective efficacy of the non-lysosomtropic QR2-selective
4-aminoquinoline, 7-chloro-N-methylquinolin-4-amine (7C-4MAQ, Example Compound E shown
above) in the same model. 7-chloro-N-methylquinolin-4-amine results in strikingly
significant neuroprotection in this animal model, with reductions in cortical stroke
volumes nearly 2x those seen after CQ administration when comparing at an equivalent
single, acute phase dose (25 mg/kg)
(FIG. 3C).
[0113] It is worth noting that the 25 mg/kg dose remains more than 20 times lower than the
LD
50 determined for this compound. Finally, we compared QR2 null mice to their littermate
controls in the same MCA occlusion/reperfusion model, as also shown in
FIG. 3C.
Example 4: Traumatic Brain Injury (TBI)
[0115] As in the stroke model, nearly identical trends are observed when comparing 7C-4MAQ
to CQ, and QR2 null mice to their littermate controls.
Example 5: Intracranial hemorrhage (ICH)
[0117] It has been previously reported that aminoquinolines such as CQ and hydroxychloroquine
inhibit the second half of the QR2 reaction, whereas other quinolines such as primaquine
inhibit the first half. In this particular ICH model
(FIG. 5), it is noted that previous neuroprotective interventions have only shown statistically
discernable therapeutic efficacy at the histological and molecular but not behavioral
level. In our experiments, CQ therapy also resulted in a non-significant 14% (p=0.3)
improvement in motor function (rotorod assessment). However, 7C-4MAQ administration
resulted in a statistically significant 21% improvement (p=0.013, two-tail
t, n=21) in behavioral outcome following a single 25 mg/kg i.p. dose (data not shown).
Also noteworthy, primaquine, which selectively inhibits only the first stage of the
QR2 reaction, resulted in 35% worsening in motor function (p=0.0001) after an equivalent
single i.p. dose (data not shown).
Example 6: Post-operative cognitive deficit
[0118] Perioperative cerebral injury (PCI) following major cardiovascular surgery using
cardiopulmonary bypass (CPB) and deep hypothermic circulatory arrest (DHCA) remains
a significant cause of adverse cerebral outcome. We compared the effects of CQ versus
7C-4MAQ QR2 inhibition on cerebral outcome following cardiopulmonary bypass (CPB)/deep
hypothermic circulatory arrest (DHCA) in a well-established rat model originally developed
in Dr. Podgoreanu's laboratory at Duke (de
Lange et al., "A novel survival model of cardioplegic arrest and cardiopulmonary bypass
in rats: a methodology paper," J Cardiothorac Surg. 2008 Aug 19;3:51). Results are shown in
FIGS. 6, 7 and 8. For this model of CPB/DHCA, fasting adult male Sprague-Dawley rats (10-12 weeks old)
were anaesthetized with inhaled isoflurane 2-2.5%, intubated and mechanically ventilated.
Cannulas were placed in the tail artery and the right external jugular vein. Animals
were then cooled on CPB for 30 minutes, and DHCA was instituted at a pericranial temperature
of 16-18 °C. Following 60 minutes of DHCA, CPB was reinitiated, animals were rewarmed
for 30 minutes, and separated from CPB at a temperature ≥35.5 °C. MRI was performed
on day-1 post-operatively, neurological assessments on day 1 and 2 post-operatively,
and animals then sacrificed after day 2.
[0119] MRI analysis of preliminary results reveals a 3% decrease in post-operative blood
brain barrier permeability as measured by gadolinium chelate in animals treated with
chloroquine (CQ) or the Example Compound (7C-4MAQ) compared to their respective control
groups (p< 0.05). Animals treated with either CQ or 7C-4MAQ also show fewer apoptotic
and necrotic neurons in cortex and hippocampus
(FIG. 6, FIG. 7). Finally, 7C-4MAQ-treated rats demonstrate significantly improved neurological
scores at post-op day 1 and 2
(FIG. 8).
Example 7: Dementia, vascular subtype
[0120] Vascular dementia is caused by chronic cerebral hypoperfusion and is characterized
clinically by white matter lesions on MRI and a decline in executive function. Recent
studies have shown that hippocampal expression of quinone oxidoreductase 2 (QR2) is
significantly increased in rat models as well as human patients with dementia, suggesting
QR2 as a possible therapeutic target. We examined the neuroprotective action of chloroquine
and 7C-4MAQ in a murine model of vascular dementia. Physiological, cellular, and functional
outcomes were determined using a combination of quantitative immunochemistry, MRI,
and behavioral tasks including Morris water maze and rotorod.
[0121] As shown in
FIG. 9-FIG. 12, both QR2 inhibitors improved performance on Morris water maze while decreasing astrocytosis,
microgliosis, and markers of oxidative stress. Note that in
FIG. 9-FIG. 12, 7C-4MAQ is referred to using a previous designation, "N-MCG." Despite improvements
in functional outcome and cellular inflammatory responses, structural markers of white
matter injury were unchanged between treatment and control groups. These results provide
evidence of a pathologic role for QR2 in dementia and its potential as a therapeutic
target. In addition, the results suggest that functionally relevant neuroprotection
occurs through mechanisms independent of those responsible for dementia-associated
white matter lesions often characterized on MRI.