(19)
(11) EP 3 965 111 B8

(12) CORRECTED EUROPEAN PATENT SPECIFICATION
Note: Bibliography reflects the latest situation

(15) Correction information:
Corrected version no 1 (W1 B1)

(48) Corrigendum issued on:
11.06.2025 Bulletin 2025/24

(45) Mention of the grant of the patent:
30.04.2025 Bulletin 2025/18

(21) Application number: 21190438.8

(22) Date of filing: 28.08.2014
(51) International Patent Classification (IPC): 
G16B 20/00(2019.01)
C12Q 1/6869(2018.01)
G16B 30/10(2019.01)
G06N 3/12(2023.01)
G06N 3/126(2023.01)
G16B 30/00(2019.01)
G16B 20/20(2019.01)
(52) Cooperative Patent Classification (CPC):
G06N 3/126; G16B 30/00; G16B 20/00; G16B 30/10; G16B 20/20; C12Q 1/6869

(54)

METHODS FOR GENOMIC ANALYSIS

VERFAHREN ZUR GENOMANALYSE

MÉTHODES D'ANALYSE GÉNOMIQUE


(84) Designated Contracting States:
AL AT BE BG CH CY CZ DE DK EE ES FI FR GR HR HU IE IS IT LI LT LU LV MC MK MT NL NO PL PT RO RS SE SI SK SM TR

(30) Priority: 30.08.2013 US 201361872611 P

(43) Date of publication of application:
09.03.2022 Bulletin 2022/10

(60) Divisional application:
25172838.2 / 4567682

(62) Application number of the earlier application in accordance with Art. 76 EPC:
14840405.6 / 3039161

(73) Proprietor: Personalis, Inc.
Fremont, CA 94555 (US)

(72) Inventors:
  • HARRIS, Jason
    San Carlos, 94070 (US)
  • PRATT, Mark R.
    Belmont, 94002 (US)
  • WEST, John
    Cupertino, 95014 (US)
  • CHEN, Richard
    Burlingame, 94010 (US)
  • LI, Ming
    Fremont, 94555 (US)

(74) Representative: Secerna LLP 
The Old Fire Station 18 Clifford Street
York YO1 9RD
York YO1 9RD (GB)


(56) References cited: : 
   
  • SHIGEMIZU D ET AL: "A practical method to detect SNVs and indels from whole genome and exome sequencing data", SCIENTIFIC REPORTS, vol. 3, 8 July 2013 (2013-07-08), XP055321925, DOI: 10.1038/srep02161
  • WARREN R L ET AL: "Targeted Assembly of Short Sequence Reads", PLOS ONE, vol. 6, no. 5, 11 May 2011 (2011-05-11), pages e19816, XP055347747, DOI: 10.1371/journal.pone.0019816
  • PASANIUC B ET AL: "Extremely low-coverage sequencing and imputation increases power for genome-wide association studies", NATURE GENETICS, vol. 44, no. 6, 20 May 2012 (2012-05-20), New York, pages 631 - 635, XP055448723, ISSN: 1061-4036, DOI: 10.1038/ng.2283
   
Note: Within nine months from the publication of the mention of the grant of the European patent, any person may give notice to the European Patent Office of opposition to the European patent granted. Notice of opposition shall be filed in a written reasoned statement. It shall not be deemed to have been filed until the opposition fee has been paid. (Art. 99(1) European Patent Convention).