CROSS REFERENCE
BACKGROUND
Field
[0002] Compounds, compositions, and methods that may be used for treating or preventing
human immunodeficiency virus (HIV) infection are disclosed. In particular, novel bridged
tricyclic carbamoylpyridone compounds and methods for their preparation and use as
therapeutic or prophylactic agents are disclosed.
Description of Related Art
[0003] Human immunodeficiency virus infection and related diseases are a major public health
problem worldwide. Human immunodeficiency virus encodes three enzymes which are required
for viral replication: reverse transcriptase, protease, and integrase. Although drugs
targeting reverse transcriptase and protease are in wide use and have shown effectiveness,
particularly when employed in combination, toxicity and development of resistant strains
may limit their usefulness (
Palella, et al. N. Engl. J Med. (1998) 338:853-860;
Richman, D. D. Nature (2001) 410:995-1001). Accordingly, there is a need for new agents that inhibit the replication of HIV.
[0004] A goal of antiretroviral therapy is to achieve viral suppression in the HIV infected
patient. Current treatment guidelines published by the United States Department of
Health and Human Services provide that achievement of viral suppression requires the
use of combination therapies,
i.e., several drugs from at least two or more drug classes (Panel on Antiretroviral Guidelines
for Adults and Adolescents. Guidelines for the Use of Antiretroviral Agents in Adults
and Adolescents Living with HIV. Department of Health and Human Services. Available
at http://www.aidsinfo.nih.gov/ContentFiles/AdultandAdolescentGL.pdf. Accessed February
12, 2019). In addition, decisions regarding the treatment of HIV infected patients
are complicated when the patient requires treatment for other medical conditions (Id.
at F-8). Because the standard of care requires the use of multiple different drugs
to suppress HIV, as well as to treat other conditions the patient may be experiencing,
the potential for drug interaction is a criterion for selection of a drug regimen.
As such, there is a need for antiretroviral therapies having a decreased potential
for drug interactions.
[0006] For certain patients, for example, those with difficult or limited access to health
care, adherence to daily oral treatment or prophylactic regimens can be challenging.
Drugs that offer favorable pharmaceutical properties (for example, improved potency,
long-acting pharmacokinetics, low solubility, low clearance, and/or other properties)
are amenable to less frequent administration and provide for better patient compliance.
Such improvements can, in turn, optimize drug exposure and limit the emergence of
drug resistance.
SUMMARY
[0007] The present disclosure is directed to novel compounds having antiviral activity and
pharmaceutically acceptable salts thereof. In some embodiments, the compounds may
be used to treat HIV infections, to inhibit the activity of HIV integrase and/or to
reduce HIV replication. In some embodiments, compounds disclosed herein may be effective
against a range of known drug-resistant HIV mutants. In some embodiments, compounds
disclosed herein may have a decreased propensity to cause drug-drug interactions when
co-administered with other drugs. In some embodiments, compounds disclosed herein
may be administered with less than daily frequency, for example, at weekly, monthly,
or longer intervals.
[0008] In one embodiment, compounds having the following formula (I) or pharmaceutically
acceptable salts thereof are provided:

wherein
- R1
- is H or C6-10aryl, wherein C6-10aryl is optionally substituted with one to four RA1, wherein each RA1 is independently halo, C1-6alkyl, C1-4haloalkyl, cyano, -O-C1-4alkyl, or C1-4alkyl-O-C1-4alkyl;
- R2
- is H, C1-6alkyl, or C1-4haloalkyl;
- L
- is -CR3aR3b-, -C(O)-, -SO2-, -CH2-CH2-, or -N(Ra)-;
- W1
- is a bond or -CR4aR4b-;
- W2
- is -CR5aR5b-, -CR5aR5bCR5cR5d-, -CR6a=CR6b-, -N(R7)-, -O-, -S(O)n-, -C(O)-,-C(O)O-, -C(O)NH-, -CR5aR5b-N(R7)-, -CR5aR5b-O-, -CR5aR5b-S(O)n-,-CR5aR5b-C(O)-, -CR5aR5b-C(O)O- -CR5aR5b-OC(O)-, -CR5aR5b-C(O)NH-, or -CR5aR5b-NHC(O)-;
- X
- is a bond or -CR8aR8b-;
- Y
- is -C(O)NH- or Q, wherein Q is



- Z
- is -CR9aR9b-, -CR9aR9bCR9cR9d-, or -CR10a=CR10b-;
- R3a and R3b
- are independently H, C1-6alkyl, C1-4haloalkyl, or -O-C1-4alkyl; or optionally:
- R3a and R3b
- together with the carbon atom to which they are attached form a 3- to 7-membered saturated
or partially unsaturated spiro ring containing 0 to 2 heteroatoms selected from N,
O, and S, wherein the spiro ring is optionally substituted with one to three RA2, wherein each RA2 is independently halo, C1-4alkyl or C1-4haloalkyl;
- R4a and R4b
- are independently H, C1-6alkyl, C1-4haloalkyl, or halo;
- R5a, R5b, R5c, and R5d
- are independently H, C1-6alkyl, C1-4haloalkyl, halo, hydroxyl, cyano, -O-C1-4alkyl, or C1-4alkylene-O-C1-4alkyl; or optionally:
R5a and R5b or R5c and R5d together with the carbon atom to which they are attached form a 3- to 7-membered
saturated or partially unsaturated spiro ring containing 0 to 2 heteroatoms selected
from N, O, and S, wherein the spiro ring is optionally substituted with one to three
RA3, wherein each RA3 is independently halo, C1-4alkyl or C1-4haloalkyl; or
R5a and R5c or R5b and R5d together with the carbon atoms to which each is attached form a 3- to 7-membered
saturated or partially unsaturated fused ring containing 0 heteroatoms or 1 heteroatom
selected from N, O, and S, wherein the fused ring is optionally substituted with one
to three RA3, wherein each RA3 is independently halo, C1-4alkyl or C1-4haloalkyl;
- each R6a and R6b
- is independently H, halo, C1-4haloalkyl, or C1-6alkyl; optionally:
R6a and R6b together with the carbon atoms to which each is attached form a 5- to 10-membered
partially unsaturated fused ring containing 0 heteroatoms or 1 heteroatom selected
from N, O, and S, or a 5- to 10-membered fused aromatic ring, or a 5- to 10-membered
fused heteroaromatic ring containing 1 to 2 heteroatoms selected from N, O and S,
wherein the partially unsaturated fused ring, fused aromatic ring, or fused heteroaromatic
ring is optionally substituted with one to four RA4, wherein each RA4 is independently halo or C1-4alkyl;
- R7
- is H, C1-6alkyl, C1-4haloalkyl, C(O)Rc, or SO2Rc;
- R8a and R8b
- are each independently H, hydroxyl, -O-C1-4alkyl, C1-4alkylene-O-C1-4alkyl, C1-6alkyl, C1-4haloalkyl, cyano, or halo; or optionally:
R8a and R8b together with the carbon atom to which they are attached form a 3- to 7-membered
saturated or partially unsaturated spiro ring containing 0 to 2 heteroatoms selected
from N, O, and S, wherein the spiro ring is optionally substituted with one to four
RA5, wherein each RA5 is independently halo, C1-4alkyl or C1-4haloalkyl; or optionally:
R8a is H, hydroxyl, -O-C1-4alkyl, C1-4alkylene-O-C1-4alkyl, C1-6alkyl, C1-4haloalkyl, cyano, or halo; and
R8b and one of R5a, R5b, R5c, R5d, and R7 together with the atoms to which each is attached form a 3- to 7-membered saturated
or partially unsaturated fused ring containing 0 to 2 heteroatoms selected from N,
O and S, wherein the fused ring is optionally substituted with one to four RA5, wherein each RA5 is independently halo or C1-4alkyl; or
R8b and R2 together with the carbon atoms to which each is attached form a 3- to 7-membered
saturated or partially unsaturated fused ring containing 0 to 2 heteroatoms selected
from N, O and S, wherein the fused ring is optionally substituted with one to four
RA5, wherein each RA5 is independently halo or C1-4alkyl;
- R9a, R9b, R9c, and R9d
- are each independently H, C1-6alkyl, C1-4haloalkyl, or halo; or optionally:
R9a and R9b or R9c and R9d together with the carbon atom to which they are attached form a 3- to 7-membered
saturated or partially unsaturated spiro ring containing 0 to 2 heteroatoms selected
from N, O, and S, wherein the spiro ring is optionally substituted with one to three
RA6, wherein each RA6 is independently halo, C1-4alkyl or C1-4haloalkyl; or
R9a and R9c or R9b and R9d together with the carbon atoms to which each is attached form a 3- to 7-membered
saturated or partially unsaturated fused ring containing 0 heteroatoms or 1 heteroatom
selected from N, O, and S, wherein the fused ring is optionally substituted with one
to three RA6, wherein each RA6 is independently halo, C1-4alkyl, or C1-4haloalkyl; or
one of R9a, R9b, R9c, and R9d and one of R4a, R4b, R5a, R5b, and R7 together with the atoms to which each is attached form a 3- to 7-membered saturated
or partially unsaturated fused ring containing 0 to 2 heteroatoms selected from N,
O and S, wherein the fused ring is optionally substituted with one to four RA6, wherein each RA6 is independently halo or C1-4alkyl;
- R10a and R10b
- are independently H, halo, C1-4haloalkyl, or C1-6alkyl; or optionally:
R10A and R10B together with the carbon atoms to which each is attached form a 5- to 10-membered
partially unsaturated fused ring containing 0 heteroatoms or 1 heteroatom selected
from N, O, and S, or a 5- to 10-membered fused aromatic ring, or a 5- to 10-membered
fused heteroaromatic ring containing 1 to 2 heteroatoms selected from N, O and S,
wherein the partially unsaturated fused ring, fused aromatic ring, or fused heteroaromatic
ring is optionally substituted with one to four RA7, wherein each RA7 is independently halo or C1-4alkyl;
- Ra
- is independently H, C1-6alkyl, C1-6haloalkyl, C(O)Rc, or SO2Rc;
- Rb
- is H or C1-4alkyl;
- Rc
- is C1-4alkyl or -O-C1-4alkyl; and each n is 0, 1, or 2.
[0009] In one aspect, a pharmaceutical composition is provided comprising a therapeutically
effective amount of a compound of formula
I or a pharmaceutically acceptable salt thereof, and a pharmaceutically acceptable
excipient.
[0010] In another embodiment, a kit or an article of manufacture comprising a compound of
formula I or a pharmaceutically acceptable salt thereof, and instructions for use.
[0011] In another embodiment, a method of treating an HIV infection in a human having or
at risk of having the infection, by administering to the human a therapeutically effective
amount of a compound of formula
I or a pharmaceutically acceptable salt thereof, or a pharmaceutical composition of
a compound of formula
I or a pharmaceutically acceptable salt thereof, is provided.
[0012] In another embodiment, use of a compound of formula
I or a pharmaceutically acceptable salt thereof, or a pharmaceutical composition of
a compound of formula
I or a pharmaceutically acceptable salt thereof, for treating an HIV infection in a
human having or at risk of having the infection is provided.
[0013] In another embodiment, a compound of formula
I or a pharmaceutically acceptable salt thereof, or a pharmaceutical composition of
a compound of formula
I or a pharmaceutically acceptable salt thereof, for use in medical therapy is provided.
[0014] In another embodiment, a compound of formula
I or a pharmaceutically acceptable salt thereof, or a pharmaceutical composition of
a compound of formula
I or a pharmaceutically acceptable salt thereof, for use in treating an HIV infection
is provided.
[0015] In another embodiment, use of a compound of formula
I or a pharmaceutically acceptable salt thereof in the manufacture of a medicament
for treating an HIV infection in a human having or at risk of having the infection
is provided.
[0016] In another embodiment, a method of using a compound of formula
I in therapy is provided. In particular, a method of treating the proliferation of
the HIV virus, treating AIDS, or delaying the onset of AIDS or ARC symptoms in a mammal
(
e.g., a human), comprising administering to the mammal a compound of formula
I or a pharmaceutically acceptable salt thereof, and a pharmaceutically acceptable
excipient, is provided.
[0017] In another embodiment, a composition comprising a compound of formula
I or a pharmaceutically acceptable salt thereof, and a pharmaceutically acceptable
excipient, for use in a method of treating the proliferation of the HIV virus, treating
AIDS, or delaying the onset of AIDS or ARC symptoms in a mammal (
e.g., a human) is provided.
[0018] In another embodiment, a kit or an article of manufacture comprising a composition
effective to treat or prevent an HIV infection; and packaging material comprising
a label which indicates that the composition can be used to treat or prevent infection
by HIV, is provided. Exemplary compositions comprise a compound of formula
I as disclosed herein or a pharmaceutically acceptable salt thereof.
[0019] In still another embodiment, a method of inhibiting the replication of HIV is provided.
The method comprises exposing the virus to an effective amount of a compound of formula
I or a salt thereof, under conditions where replication of HIV is inhibited.
[0020] In another embodiment, the use of a compound of formula
I to inhibit the activity of the HIV integrase enzyme is provided.
[0021] In another embodiment, the use of a compound of formula
I or a pharmaceutically acceptable salt thereof to inhibit the activity of the HIV
integrase enzyme is provided.
[0022] In another embodiment, the use of a compound of formula
I or a salt thereof, to inhibit the replication of HIV is provided.
[0023] In another embodiment, the use of a compound of formula
I or a pharmaceutically acceptable salt thereof, as a research tool is provided.
[0024] Other embodiments, objects, features, and advantages may be set forth in the detailed
description of the embodiments that follows, and in part may be apparent from the
description, or may be learned by practice, of the claimed embodiments. These objects
and advantages may be realized and attained by the processes and compositions particularly
pointed out in the description and claims thereof. The foregoing Summary has been
made with the understanding that it is to be considered as a brief and general synopsis
of some of the embodiments disclosed herein, is provided for the benefit and convenience
of the reader, and is not intended to limit in any manner the scope, or range of equivalents,
to which the appended claims are lawfully entitled.
DETAILED DESCRIPTION
[0025] In the following description, certain specific details are set forth in order to
provide a thorough understanding of various embodiments disclosed herein. However,
one skilled in the art will understand that the embodiments disclosed herein may be
practiced without these details. The description below of several embodiments is made
with the understanding that the present disclosure is to be considered as an exemplification
of the claimed subject matter, and is not intended to limit the appended claims to
the specific embodiments illustrated. The headings used throughout this disclosure
are provided for convenience only and are not to be construed to limit the claims
in any way. Embodiments illustrated under any heading may be combined with embodiments
illustrated under any other heading.
Definitions
[0026] Unless the context requires otherwise, throughout the present disclosure and claims,
the word "comprise" and variations thereof, such as, "comprises" and "comprising"
are to be construed in an open, inclusive sense, that is as "including, but not limited
to".
[0027] Reference throughout this specification to "one embodiment" or "an embodiment" means
that a particular feature, structure or characteristic described in connection with
the embodiment is included in at least one embodiment disclosed herein. Thus, the
appearances of the phrases "in one embodiment" or "in an embodiment" in various places
throughout this specification are not necessarily all referring to the same embodiment.
Furthermore, the particular features, structures, or characteristics may be combined
in any suitable manner in one or more embodiments.
[0028] "Amino" refers to the -NH
2 radical.
[0029] "Hydroxy" or "hydroxyl" refers to the -OH radical.
[0030] "Oxo" refers to the =O substituent.
[0031] A prefix such as "C
u-v" or (C
u-C
v) indicates that the following group has from u to v carbon atoms. For example, "C
1-6alkyl" indicates that the alkyl group has from 1 to 6 carbon atoms.
[0032] "Alkyl" refers to a straight or branched chain hydrocarbon radical consisting of
carbon and hydrogen atoms, which is saturated, having from one to twelve carbon atoms
(C
1-12alkyl), in certain embodiments one to eight carbon atoms (C
1-8alkyl) or one to six carbon atoms (C
1-6alkyl), or one to four carbon atoms (C
1-4alkyl), and which is attached to the rest of the molecule by a single bond,
e.g., methyl, ethyl,
n-propyl, 1-methylethyl (
iso-propyl),
n-butyl, 1-methylpropyl (
sec-butyl), 2-methylpropyl (
iso-butyl), 1,1-dimethylethyl (t-butyl),
n-pentyl, hexyl, 3-methylhexyl, 2-methylhexyl, and the like.
[0033] "Alkylene" refers to a saturated, branched or straight chain or cyclic hydrocarbon
radical having two monovalent radical centers derived by the removal of two hydrogen
atoms from the same or two different carbon atoms of a parent alkane. For example,
an alkylene group can have 1 to 12 carbon atoms, 1 to 10 carbon atoms, 1 to 6 carbon
atoms, or 1 to 4 atoms. Typical alkylene radicals include, but are not limited to,
methylene (-CH
2-), 1,1 ethyl (-CH(CH
3)-), 1,2-ethyl (-CH
2CH
2-), 1,1-propyl (-CH(CH
2CH
3)-), 1,2-propyl (-CH
2CH(CH
3)-), 1,3-propyl (-CH
2CH
2CH
2-), 1,4-butyl (-CH
2CH
2CH
2CH
2-), and the like.
[0034] "Aryl" or "aromatic ring" refers to an aromatic carbocyclic group having a single
ring (
e.g. monocyclic) or multiple rings (
e.g. bicyclic or tricyclic) including fused systems. As used herein, aryl has 6 to 20
ring carbon atoms (
i.e., C
6-20 aryl), 6 to 12 carbon ring atoms (
i.e., C
6-12 aryl), 6 to 10 carbon ring atoms (
i.e., C
6-10 aryl), or 5 to 10 carbon ring atoms (
i.e., C
5-10 aryl). Examples of aryl groups include, but are not limited to, phenyl, naphthyl,
fluorenyl, and anthryl.
[0035] "Cyano" or "carbonitrile" refers to the group -CN.
[0036] "Carbocyclic ring" refers to a non-aromatic hydrocarbon ring consisting of carbon
and hydrogen atoms, having from three to fifteen carbon atoms, in certain embodiments
having from three to ten carbon atoms or from three to seven carbon atoms, and which
is saturated or partially unsaturated and attached to the rest of the molecule by
a single bond. Carbocyclic rings include, for example, cyclopropane, cyclobutane,
cyclopentane, cyclopentene, cyclohexane, cyclohexene, 1,3-cyclohexadiene, 1,4-cyclohexadiene,
cycloheptane, cycloheptene, and cyclooctane.
[0037] "Fused" refers to a carbocyclic, heterocyclic, aromatic, or heteroaromatic ring structure
described herein which is connected to an existing ring structure in the compounds
disclosed herein
via two adjacent atoms that are shared by the fused ring structure and the existing ring
structure. For example, the bicyclic compounds depicted below incorporate fused cyclopropane
(
i.e., a cyclopropane ring fused to a cyclohexane ring), a fused pyrrolidine (
i.e., a pyrrolidine ring fused to a benzene ring), and fused thiophene (
i.e., a thiene ring fused to a furan ring), respectively:

[0038] "Spiro" or "spirocyclic" refers to a carbocyclic or heterocyclic ring structure described
herein which is connected to an existing ring structure in the compounds disclosed
herein
via a single atom that is shared by the spiro ring structure and the existing ring structure.
For example, the bicyclic compounds below incorporate spiro cyclopropane (
i.e., a cyclopropane ring that is spirocyclic to a cyclohexane ring), spiro 1,3-dithiolane
(
i.e., a 1,3-dithiolane ring that is spirocyclic to a cycloheptane ring), and spiro cyclopentene
(
i.e., a cyclopentene ring that is spirocyclic to a cyclohexene ring), respectively:

[0039] "Halo" or "halogen" refers to bromo, chloro, fluoro or iodo.
[0040] "Haloalkyl" refers to an alkyl group, as defined above, that is substituted by one
or more halo radicals, as defined above,
e.g., trifluoromethyl, difluoromethyl, trichloromethyl, 2,2,2-trifluoroethyl, 1,2-difluoroethyl,
3-bromo-2-fluoropropyl, 1,2-dibromoethyl, and the like.
[0041] "Heteroaromatic ring" refers to an aromatic group having a single ring, multiple
rings, or multiple fused rings, with one or more ring heteroatoms (for example, 1
to 3 ring heteroatoms, 1 to 2 ring heteroatoms, or 1 ring heteroatom) independently
selected from nitrogen, oxygen, and sulfur. As used herein, heteroaryl includes 5
to 20 ring atoms (5 to 20 membered heteroaromatic ring), 5 to 12 ring atoms (5 to
12 membered heteroaromatic ring), 5 to 10 ring atoms (5 to 10 membered heteroaromatic
ring) or 5 to 6 ring atoms (5 to 6 membered heteroaromatic ring). Examples of heteroaryl
groups include pyrimidinyl, purinyl, pyridyl, pyridazinyl, benzothiazolyl, and pyrazolyl.
[0042] "Heterocyclyl" or "heterocyclic ring" refers to a non-aromatic radical or ring having
from three to fifteen atoms wherein from one to six atoms are heteroatoms selected
from the group consisting of nitrogen, oxygen and sulfur and attached to the rest
of the molecule by a single bond. In certain embodiments, "heterocyclyl" has from
three to ten atoms, wherein from one to four atoms are heteroatoms selected from the
group consisting of nitrogen, oxygen and sulfur, or from three to seven atoms, wherein
from one to two atoms are heteroatoms selected from the group consisting of nitrogen,
oxygen and sulfur. The nitrogen, carbon or sulfur atoms in the heterocyclyl may be
optionally oxidized; the nitrogen atom may be optionally quaternized. As used herein,
"heterocyclyl" or "heterocyclic ring" refers to rings that are saturated unless otherwise
indicated, e.g., in some embodiments "heterocyclyl" or "heterocyclic ring" refers
to rings that are saturated or partially saturated where specified. Examples of such
heterocyclyl include, but are not limited to, dioxolanyl, imidazolidinyl, isothiazolidinyl,
isoxazolidinyl, morpholinyl, 2-oxopiperazinyl, 2-oxopiperidinyl, 2-oxopyrrolidinyl,
oxazolidinyl, piperidinyl, piperazinyl, 4-piperidonyl, pyrrolidinyl, pyrazolidinyl,
thiazolidinyl, tetrahydrofuranyl, trithianyl, tetrahydropyranyl, thiomorpholinyl,
thiamorpholinyl, 1-oxo-thiomorpholinyl, and 1,1-dioxo-thiomorpholinyl.
[0043] The embodiments disclosed herein are also meant to encompass all pharmaceutically
acceptable compounds of formula
I being isotopically-labeled by having one or more atoms replaced by an atom having
a different atomic mass or mass number. Examples of isotopes that can be incorporated
into the disclosed compounds include isotopes of hydrogen, carbon, nitrogen, oxygen,
phosphorous, fluorine, chlorine, and iodine, such as
2H,
3H,
11C,
13C,
14C,
13N,
15N,
15O,
17O,
18O,
31P,
32P,
35S,
18F,
36Cl,
123I, and
125I, respectively. In certain embodiments, these radiolabeled compounds are useful to
help determine or measure the effectiveness of the compounds, by characterizing, for
example, the site or mode of action, or binding affinity to pharmacologically important
site of action. Certain isotopically-labeled compounds of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa, VIIb, VIII, IX, IXa, IXb, X, Xa, Xb, XI,
XIa, or
XIb, for example, those incorporating a radioactive isotope, are useful in drug and/or
substrate tissue distribution studies. The radioactive isotopes tritium,
i.e., 3H, and carbon-14,
i.e., 14C, are particularly useful for this purpose in view of their ease of incorporation
and ready means of detection.
[0044] In certain embodiments, substitution with heavier isotopes such as deuterium,
i.e., 2H, may afford certain therapeutic advantages resulting from greater metabolic stability.
For example,
in vivo half-life may increase or dosage requirements may be reduced. Thus, heavier isotopes
may be preferred in some circumstances.
[0045] Substitution with positron emitting isotopes, such as
11C,
18F,
15O, and
13N, can be useful in Positron Emission Topography (PET) studies for examining substrate
receptor occupancy. Isotopically-labeled compounds of formula
I can be prepared by techniques known to those skilled in the art or by processes analogous
to those described in the Examples as set out below using an appropriate isotopically-labeled
reagent in place of the non-labeled reagent previously employed.
[0046] The methods, compositions, kits and articles of manufacture provided herein use or
include compounds (
e.g., a compound of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa, VIIb, VIII, IX, IXa, IXb, X, Xa, Xb, XI,
XIa, or
XIb) or pharmaceutically acceptable salts thereof, in which from 1 to n hydrogen atoms
attached to a carbon atom may be replaced by a deuterium atom or D, in which n is
the number of hydrogen atoms in the molecule. As known in the art, the deuterium atom
is a non-radioactive isotope of the hydrogen atom. Such compounds increase resistance
to metabolism, and thus are useful for increasing the half-life of compounds or pharmaceutically
acceptable salts thereof, when administered to a mammal. See,
e.g., Foster, "Deuterium Isotope Effects in Studies of Drug Metabolism", Trends Pharmacol.
Sci., 5(12):524-527 (1984). Such compounds can be synthesized by means known in the art, for example by employing
starting materials in which one or more hydrogen atoms have been replaced by deuterium.
[0047] The embodiments disclosed herein are also meant to encompass the
in vivo metabolic products of the disclosed compounds. Such products may result from, for
example, the oxidation, reduction, hydrolysis, amidation, esterification, and the
like of the administered compound, primarily due to enzymatic processes. Accordingly,
the embodiments disclosed herein include compounds produced by a process comprising
administering a compound according to the embodiments disclosed herein to a mammal
for a period of time sufficient to yield a metabolic product thereof. Such products
are typically identified by administering a radiolabeled compound according to the
embodiments disclosed herein in a detectable dose to an animal, such as rat, mouse,
guinea pig, monkey, or to human, allowing sufficient time for metabolism to occur,
and isolating its conversion products from the urine, blood or other biological samples.
[0048] "Mammal" includes humans and both domestic animals such as laboratory animals and
household pets (
e.g., cats, dogs, swine, cattle, sheep, goats, horses, rabbits), and nondomestic animals
such as wildlife and the like.
[0049] "Optional" or "optionally" means that the subsequently described event or circumstances
may or may not occur, and that the description includes instances where said event
or circumstance occurs and instances in which it does not. For example, "optionally
substituted heterocyclyl" means that the heterocyclyl radical may or may not be substituted
and that the description includes both substituted heterocyclyl radicals and heterocyclyl
radicals having no substitution.
[0050] "Pharmaceutically acceptable excipient" includes without limitation any adjuvant,
carrier, excipient, glidant, sweetening agent, diluent, preservative, dye/colorant,
flavor enhancer, surfactant, wetting agent, dispersing agent, suspending agent, stabilizer,
isotonic agent, solvent, emulsifier, or other pharmacologically inactive substance
that is formulated in combination with a pharmacologically active ingredient of a
pharmaceutical composition and is compatible with the other ingredients of the formulation
and suitable for use in humans or domestic animals without undue toxicity, irritation,
allergic response, and the like.
[0051] Examples of "pharmaceutically acceptable salts" of the compounds disclosed herein
include salts derived from an appropriate base, such as an alkali metal (for example,
sodium), an alkaline earth metal (for example, magnesium), ammonium and NX
4+ (wherein X is C
1-4alkyl). Pharmaceutically acceptable salts of a nitrogen atom or an amino group include,
for example, salts of organic carboxylic acids such as acetic, trifluoroacetic, adipic,
ascorbic, aspartic, butyric, camphoric, cinnamic, citric, digluconic, glutamic, glycolic,
glycerophosphoric, formic, hexanoic, benzoic, lactic, fumaric, tartaric, maleic, hydroxymaleic,
malonic, malic, mandelic, isethionic, lactobionic, nicotinic, oxalic, pamoic, pectinic,
phenylacetic, 3-phenylpropionic, pivalic, propionic, pyruvic, salicylic, stearic,
sulfanilic, tartaric, undecanoic, and succinic acids; organic sulfonic acids, such
as methanesulfonic, ethanesulfonic, camphorsulfonic, mesitylenesulfonic, benzenesulfonic,
p-toluenesulfonic acids, naphthalenesulfonic, and 2-naphthalenesulfonic; and inorganic
acids, such as hydrochloric, hydrobromic, sulfuric, phosphoric, nitric, and sulfamic
acids. Pharmaceutically acceptable salts of a compound of a hydroxy group include
the anion of said compound in combination with a suitable cation such as Na
+ and NX
4+ (wherein X is independently selected from H or a C
1-4alkyl group).
[0052] For therapeutic use, salts of active ingredients of the compounds disclosed herein
will typically be pharmaceutically acceptable,
i.e., they will be salts derived from a physiologically acceptable acid or base. However,
salts of acids or bases which are not pharmaceutically acceptable may also find use,
for example, in the preparation or purification of a compound of formula
I or another compound of the embodiments disclosed herein. All salts, whether or not
derived from a physiologically acceptable acid or base, are within the scope of the
embodiments disclosed herein.
[0053] Metal salts typically are prepared by reacting the metal hydroxide with a compound
according to the embodiments disclosed herein. Examples of metal salts which are prepared
in this way are salts containing Li
+, Na
+, and K
+. A less soluble metal salt can be precipitated from the solution of a more soluble
salt by addition of the suitable metal compound.
[0054] In addition, salts may be formed from acid addition of certain organic and inorganic
acids,
e.g., HCl, HBr, H
2SO
4, H
3PO
4 or organic sulfonic acids, to basic centers, typically amines. Finally, it is to
be understood that the compositions herein comprise compounds disclosed herein in
their un-ionized, as well as zwitterionic form.
[0055] A "pharmaceutical composition" refers to a formulation of a compound of the embodiments
disclosed herein and a medium generally accepted in the art for the delivery of the
biologically active compound to mammals, e.g., humans. Such a medium includes all
pharmaceutically acceptable excipients.
[0056] "Effective amount" or "therapeutically effective amount" refers to an amount of a
compound according to the embodiments disclosed herein, which when administered to
a patient in need thereof, is sufficient to effect treatment of disease-states, conditions,
or disorders disclosed herein. Such an amount would be sufficient to elicit the biological
or medical response of a tissue system, or patient that is sought by a researcher
or clinician. The amount of a compound according to the embodiments disclosed herein
which constitutes a therapeutically effective amount will vary depending on such factors
as the compound and its biological activity, the composition used for administration,
the time of administration, the route of administration, the rate of excretion of
the compound, the duration of the treatment, the type of disease-state or disorder
being treated and its severity, drugs used in combination, or coincidentally, with
the compounds of the embodiments disclosed herein, and the age, body weight, general
health, sex and diet of the patient. Such a therapeutically effective amount can be
determined by one of ordinary skill in the art having regard to their own knowledge,
the state of the art, and this disclosure.
[0057] The terms "treating" and "treatment" as used herein are intended to mean the administration
of a compound or composition according to the present embodiments disclosed herein
to alleviate or eliminate one or more symptoms of HIV infection and/or to reduce viral
load in a patient. In certain embodiments, the terms "treating" and "treatment" also
encompass the administration of a compound or composition according to the present
embodiments disclosed herein post-exposure of the individual to the virus but before
the appearance of symptoms of the disease, and/or prior to the detection of the virus
in the blood, to prevent the appearance of symptoms of the disease and/or to prevent
the virus from reaching detectable levels in the blood, and the administration of
a compound or composition according to the present embodiments disclosed herein to
prevent perinatal transmission of HIV from mother to baby, by administration to the
mother before giving birth and to the child within the first days of life. The terms
"treating" and "treatment" also encompass the administration of a compound or composition
according to the present embodiments disclosed herein before the exposure of the individual
to the virus (also called pre-exposure prophylaxis or PrEP), to prevent HIV infection
from taking hold if the individual is exposed to the virus and/or to keep the virus
from establishing a permanent infection and/or to prevent the appearance of symptoms
of the disease and/or to prevent the virus from reaching detectable levels in the
blood. The terms "treating" and "treatment" also encompass the administration of a
compound or composition according to the present embodiments disclosed herein both
before and after the exposure of the individual to the virus.
[0058] As used herein, the terms "preventing" and "prevention" refer to the administration
of a compound, composition, or pharmaceutically salt according to the present disclosure
pre- or post-exposure of the human to the virus but before the appearance of symptoms
of the disease, and/or prior to the detection of the virus in the blood. The terms
also refer to prevention of the appearance of symptoms of the disease and/or to prevent
the virus from reaching detectible levels in the blood. The terms include both pre-exposure
prophylaxis (PrEP), as well as post-exposure prophylaxis (PEP) and event driven or
"on demand" prophylaxis. The terms also refer to prevention of perinatal transmission
of HIV from mother to baby, by administration to the mother before giving birth and
to the child within the first days of life. The terms also refer to prevention of
transmission of HIV through blood transfusion.
[0059] The term "antiviral agent" as used herein is intended to mean an agent (compound
or biological) that is effective to inhibit the formation and/or replication of a
virus in a human being, including but not limited to agents that interfere with either
host or viral mechanisms necessary for the formation and/or replication of a virus
in a human being.
[0060] The term "inhibitor of HIV replication" as used herein is intended to mean an agent
capable of reducing or eliminating the ability of HIV to replicate in a host cell,
whether
in vitro, ex vivo or
in vivo.
[0061] The compounds of the embodiments disclosed herein, or their pharmaceutically acceptable
salts may contain one or more asymmetric centers and may thus give rise to enantiomers,
diastereomers, and other stereoisomeric forms that may be defined, in terms of absolute
stereochemistry, as (R)- or (S)- or, as (D)- or (L)- for amino acids. The present
disclosure is meant to include all such possible isomers, as well as their racemic,
scalemic, and optically pure forms. Optically active (+) and (-), (R)- and (S)-, or
(D)- and (L)- isomers may be prepared using chiral synthons or chiral reagents, or
resolved using methods such as chromatography and fractional crystallization. Techniques
for the preparation/isolation of individual enantiomers include chiral synthesis from
a suitable optically pure precursor or resolution of the racemate (or the racemate
of a salt or derivative) using, for example, chiral high pressure liquid chromatography
(HPLC). When the compounds described herein contain olefinic double bonds or other
centers of geometric asymmetry, and unless specified otherwise, it is intended that
the compounds include both E and Z geometric isomers. Likewise, all tautomeric forms
are also intended to be included.
[0062] A "stereoisomer" refers to a compound made up of the same atoms bonded by the same
bonds but having different three-dimensional structures, which are not interchangeable.
The present disclosure contemplates various stereoisomers and mixtures thereof and
includes "enantiomers", which refers to two stereoisomers whose molecules are non-superimposable
mirror images of one another. In any of the embodiments disclosed herein, compounds
disclosed herein may be in the form of a stereoisomer thereof.
[0063] "Partially unsaturated" refers to a cyclic group which contains at least one double
bond but is not aromatic.
Compounds
[0064] Provided herein are compounds that function as anti-HIV agents, pharmaceutical compositions
comprising such compounds optionally in combination with one or more (
e.g., two, three, or four) additional therapeutic agents, and methods of using such compounds
and compositions. All compound embodiments described herein include any pharmaceutically
acceptable salt, stereoisomer, or mixture of stereoisomers thereof.
[0065] In one embodiment, a compound of the following formula (I) is provided:

or a pharmaceutically acceptable salt thereof, wherein
- R1
- is H or C6-10aryl, wherein C6-10aryl is optionally substituted with one to four RA1, wherein each RA1 is independently halo, C1-6alkyl, C1-4haloalkyl, cyano, -O-C1-4alkyl, or C1-4alkyl-O-C1-4alkyl;
- R2
- is H, C1-6alkyl, or C1-4haloalkyl;
- L
- is -CR3aR3b-, -C(O)-, -SO2-, -CH2-CH2-, or -N(Ra)-;
- W1
- is a bond or -CR4aR4b-;
- W2
- is -CR5aR5b-, -CR5aR5bCR5cR5d-, -CR6a=CR6b-, -N(R7)-, -O-, -S(O)n-, -C(O)-,-C(O)O-, -C(O)NH-, -CR5aR5b-N(R7)-, -CR5aR5b-O-, -CR5aR5b-S(O)n,-CR5aR5b-C(O)-, -CR5aR5b-C(O)O-, -CR5aR5b-OC(O)-, -CR5aR5b-C(O)NH-, or -CR5aR5b-NHC(O)-;
- X
- is a bond or -CR8aR8b-;
- Y
- is -C(O)NH- or Q, wherein Q is



- Z
- is -CR9aR9b- , -CR9aR9b-CR9cR9d-, or -CR10a=CR10b-;
- R3a and R3b
- are independently H, C1-6alkyl, C1-4haloalkyl, or -O-C1-4alkyl; or optionally:
R3a and R3b together with the carbon atom to which they are attached form a 3- to 7-membered
saturated or partially unsaturated spiro ring containing 0 to 2 heteroatoms selected
from N, O, and S, wherein the spiro ring is optionally substituted with one to three
RA2, wherein each RA2 is independently halo, C1-4alkyl or C1-4haloalkyl;
- R4A and R4b
- are independently H, C1-6alkyl, C1-4haloalkyl, or halo;
- R5a, R5b, R5c, and R5d
- are independently H, C1-6alkyl, C1-4haloalkyl, halo, hydroxyl, cyano, -O-C1-4alkyl, or C1-4alkylene-O-C1-4alkyl; or optionally:
R5a and R5b or R5c and R5d together with the carbon atom to which they are attached form a 3- to 7-membered
saturated or partially unsaturated spiro ring containing 0 to 2 heteroatoms selected
from N, O, and S, wherein the spiro ring is optionally substituted with one to three
RA3, wherein each
RA3 is independently halo, C1-4alkyl or C1-4haloalkyl; or
R5a and R5c or R5b and R5d together with the carbon atoms to which each is attached form a 3- to 7-membered
saturated or partially unsaturated fused ring containing 0 heteroatoms or 1 heteroatom
selected from N, O, and S, wherein the fused ring is optionally substituted with one
to three RA3, wherein each RA3 is independently halo, C1-4alkyl or C1-4haloalkyl;
- each R6a and R6b
- is independently H, halo, C1-4haloalkyl, or C1-6alkyl; optionally:
R6a and R6b together with the carbon atoms to which each is attached form a 5- to 10-membered
partially unsaturated fused ring containing 0 heteroatoms or 1 heteroatom selected
from N, O, and S, or a 5- to 10-membered fused aromatic ring, or a 5- to 10-membered
fused heteroaromatic ring containing 1 to 2 heteroatoms selected from N, O and S,
wherein the partially unsaturated fused ring, fused aromatic ring, or fused heteroaromatic
ring is optionally substituted with one to four RA4, wherein each RA4 is independently halo or C1-4alkyl;
- R7
- is H, C1-6alkyl, C1-4haloalkyl, C(O)Rc, or SO2Rc;
- R8a and R8b
- are each independently H, hydroxyl, -O-C1-4alkyl, C1-4alkylene-O-C1-4alkyl, C1-6alkyl, C1-4haloalkyl, cyano, or halo; or optionally:
R8a and R8b together with the carbon atom to which they are attached form a 3- to 7-membered
saturated or partially unsaturated spiro ring containing 0 to 2 heteroatoms selected
from N, O, and S, wherein the spiro ring is optionally substituted with one to four
RA5, wherein each RA5 is independently halo, C1-4alkyl or C1-4haloalkyl; or optionally:
R8a is H, hydroxyl, -O-C1-4alkyl, C1-4alkylene-O-C1-4alkyl, C1-6alkyl, C1-4haloalkyl, cyano, or halo; and
R8b and one of R5a, R5b, R5c, R5d, and R7 together with the atoms to which each is attached form a 3- to 7-membered saturated
or partially unsaturated fused ring containing 0 to 2 heteroatoms selected from N,
O and S, wherein the fused ring is optionally substituted with one to four RA5, wherein each RA5 is independently halo or C1-4alkyl; or
R8b and R2 together with the carbon atoms to which each is attached form a 3- to 7-membered
saturated or partially unsaturated fused ring containing 0 to 2 heteroatoms selected
from N, O and S, wherein the fused ring is optionally substituted with one to four
RA5, wherein each RA5 is independently halo or C1-4alkyl;
- R9a, R9b, R9c, and R9d
- are each independently H, C1-6alkyl, C1-4haloalkyl, or halo; or optionally:
R9a and R9b or R9c and R9d together with the carbon atom to which they are attached form a 3- to 7-membered
saturated or partially unsaturated spiro ring containing 0 to 2 heteroatoms selected
from N, O, and S, wherein the spiro ring is optionally substituted with one to three
RA6, wherein each RA6 is independently halo, C1-4alkyl or C1-4haloalkyl; or
R9a and R9c or R9b and R9d together with the carbon atoms to which each is attached form a 3- to 7-membered
saturated or partially unsaturated fused ring containing 0 heteroatoms or 1 heteroatom
selected from N, O, and S, wherein the fused ring is optionally substituted with one
to three RA6, wherein each RA6 is independently halo, C1-4alkyl, or C1-4haloalkyl; or
one of R9a, R9b, R9c, and R9d and together with the atoms to which each is attached form a 3- to 7-membered saturated
or partially unsaturated fused ring containing 0 to 2 heteroatoms selected from N,
O and S, wherein the fused ring is optionally substituted with one to four RA6, wherein each R
one of R4a, R4b, R5a, R5b, and R7 A6 is independently halo or C1-4alkyl;
- R10a and R10b
- are independently H, halo, C1-4haloalkyl, or C1-6alkyl; or optionally:
R10a and R10b together with the carbon atoms to which each is attached form a 5- to 10-membered
partially unsaturated fused ring containing 0 heteroatoms or 1 heteroatom selected
from N, O, and S, or a 5- to 10-membered fused aromatic ring, or a 5- to 10-membered
fused heteroaromatic ring containing 1 to 2 heteroatoms selected from N, O and S,
wherein the partially unsaturated fused ring, fused aromatic ring, or fused heteroaromatic
ring is optionally substituted with one to four RA7, wherein each RA7 is independently halo or C1-4alkyl;
Ra is independently H, C1-6alkyl, C1-6haloalkyl, C(O)Rc, or SO2Rc;
Rb is H or C1-4alkyl;
Rc is C1-4alkyl or -O-C1-4alkyl; and each n is 0, 1, or 2.
[0066] In some embodiments of the compound of formula
I, or a pharmaceutically acceptable salt thereof, R
2 is H, C
1-4alkyl, or C
1-4haloalkyl. In some embodiments, R
2 is H or C
1-4alkyl. In some embodiments, R
2 is H. In some embodiments, R
2 is C
1-4alkyl. In some embodiments, R
2 is methyl. In some embodiments, R
2 is H or methyl. In some embodiments, R
2 is C
1-4haloalkyl.
[0067] In some embodiments, R
2 is selected from the group consisting of H, -CH
3, - CH
2CH
3, and -CH
2F, or R
2 and R
8b together with the carbon to which they are attached form a 3-membered fused carbocyclic
ring. In some embodiments, R
2 is selected from the group consisting of H, -CH
3, -CH
2CH
3, and -CH
2F. In some embodiments, R
2 and R
8b together with the carbon to which they are attached form a 3-membered fused carbocyclic
ring.
[0068] In some embodiments of the compound of formula
I, or a pharmaceutically acceptable salt thereof, Y is -C(O)NH-. In some embodiments,
Y is Q. In some embodiments,
Y is

[0069] In some embodiments, the compound of formula
I is a compound of formula
(II):

or a pharmaceutically acceptable salt thereof, wherein R
1, L, W
1, W
2, X, and Z are as defined in formula
I.
[0070] In some embodiments of the compound of formula
I or
II, or a pharmaceutically acceptable salt thereof, R
1 is H. In some embodiments, R
1 is C
6-10aryl. In some embodiments, R
1 is phenyl, optionally substituted with one to four R
A1, wherein each R
A1 is independently halo, C
1-4alkyl, C
1-4haloalkyl, cyano, -O-C
1-4alkyl, or C
1-4alkyl-O-C
1-4alkyl. In some embodiments, R
1 is phenyl substituted with one, two, three, or four R
A1. In some embodiments, R
1 is phenyl substituted with one, two, three, or four R
A1. In some embodiments, R
1 is phenyl substituted with one, two, three, or four R
A1, wherein each R
A1 is independently halo, C
1-4alkyl, C
1-4haloalkyl, or -O-C
1-4alkyl. In some embodiments, R
1 is phenyl substituted with one, two, three, or four R
A1, wherein each R
A1 is independently halo, C
1-4alkyl, or C
1-4haloalkyl. In some embodiments, R
1 is phenyl substituted with one, two, three, or four R
A1, wherein each R
A1 is independently halo or -O-C
1-4alkyl. In some embodiments, R
1 is phenyl substituted with one, two, three, or four halogens. In some embodiments,
R
1 is phenyl substituted with one, two, or three halogens. In some embodiments, R
1 is phenyl substituted with two or three halogens. In some embodiments, R
1 is phenyl substituted with two or three halogens selected from chloro and fluoro.
In some embodiments, R
1 is

[0071] In some embodiments, of the compound
of I or
II, R
1 is selected from the group consisting of

In some embodiments, of the compound of formula
I or
II, R
1 is selected from the group consisting of

and

In some embodiments, R
1 is selected from the group consisting of

and

[0072] In some embodiments of the compound of formula
I or
II, or a pharmaceutically acceptable salt thereof, L is -CR
3aR
3b-, wherein R
3a and R
3b are independently H, C
1-4alkyl, C
1-6haloalkyl, C(O)R
c, or SO
2R
c. In some embodiments, L is -CR
3aR
3b-, wherein R
3a and R
3b are independently H or C
1-4alkyl. In some embodiments, L is -CH
2-. In some embodiments, L is - CH(CH
3)-. In some embodiments, L is -C(O)-. In some embodiments, L is or -CH
2-CH
2-. In some embodiments, L is -CH
2-, -CH(CH
3)-, -C(O)-, or -CH
2-CH
2-. In some embodiments, L is -N(R
a)-.
[0073] In some embodiments, the compound of formula
I or
II is a compound of formula:

or a pharmaceutically acceptable salt thereof, wherein R
1, L, W
1, W
2, X, and Z are as defined in formula I.
[0074] In some embodiments, the compound of formula
I or
II is a compound of formula
(IV):

or a pharmaceutically acceptable salt thereof, wherein R
1, W
1, W
2, X, and Z are as defined in formula
I.
[0075] In some embodiments, the compound of formula
I, II, or
IV is a compound of formula:

or a pharmaceutically acceptable salt thereof, wherein R
1, W
1, W
2, X, and Z are as defined in formula
I.
[0076] In some embodiments, the compound of formula
I or
II is a compound of formula (VI):

[0077] In some embodiments, the compound of formula
I, II, or VI is a compound of formula:

or a pharmaceutically acceptable salt thereof, wherein R
1, W
1, W
2, X, and Z are as defined in formula
I.
[0078] In some embodiments of the compound of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa, or
VIIb, or a pharmaceutically acceptable salt thereof, W
1 is a bond. In some embodiments, W
1 is -CR
4aR4
b-. In some embodiments, W
1 is -CR
4aR
4b-, wherein R
4a and R
4b are independently H or halo. In some embodiments, W
1 is -CH
2-. In some embodiments, W
1 is -CF
2-. In some embodiments, W
1 is -CH(F)-. In some embodiments, W
1 is a bond, -CH
2-, - CF
2- or -CH(F)-. In some embodiments, W
1 is a bond or -CH
2-.
[0079] In some embodiments of the compound of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa, or
VIIb, or a pharmaceutically acceptable salt thereof, W
1 is a bond or -CR
4aR
4b-, wherein each R
4a and R
4b is independently H, halo, or C
1-6 alkyl. In some embodiment, W
1 is bond or -CR
4aR
4b-, wherein each R
4a and R
4b is independently H, halo, or -CH
3. In some embodiment, W
1 is bond, -CH
2-, -CH(F)-, CF
2, -CH(CH
3)- or -CF(CH
3)-.
[0080] In some embodiments of the compound of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa, or
VIIb, or a pharmaceutically acceptable salt thereof, W
2 is -CR
5aR
5b-, -CR
5aR
5b-CR
5cR
5d-, -CR
6a=CR
6b-, -N(R
7)-, -O-, -CR
5aR
5b-N(R
7)- , or -CR
5aR
5b-O- , wherein R
5a, R
5b, R
5c , R
5d, R
6a R
6b, and R
7 are as defined for formula
I. In some embodiments, W
2 is -CR
5aR
5b-. In some embodiments, W
2 is -CR
5aR
5b-, wherein R
5a and R
5b are independently H, C
1-4alkyl, C
1-4haloalkyl, halo, hydroxyl, cyano, -O-C
1-4alkyl, or C
1-4alkylene-O-C
1-4alkyl. In some embodiments, W
2 is -CR
5aR
5b-, wherein R
5a and R
5b are independently H, C
1-4alkyl, C
1-4haloalkyl, halo, or hydroxyl. In some embodiments, W
2 is -CR
5aR
5b-, wherein R
5a and R
5b are independently H or halo. In some embodiments, W
2 is -CH
2-. In some embodiments, W
2 is - CF
2-. In some embodiments, W
2 is -CH(F)-. In some embodiments, W
2 is -CR
5aR
5b-CR
5cR
5d-. In some embodiments, W
2 is -CR
5aR
5b-CR
5cR
5d-, wherein R
5a, R
5b, R
5c, and R
5d are independently H, C
1-4alkyl, C
1-4haloalkyl, halo, hydroxyl, cyano, -O-C
1-4alkyl, or C
1-4alkylene-O-C
1-4alkyl. In some embodiments, W
2 is -CR
5aR
5b-CR
5cR
5d-, wherein R
5a, R
5b, R
5c, and R
5d are independently H, C
1-4alkyl, C
1-4haloalkyl, halo, hydroxyl. In some embodiments, W
2 is - CR
5aR
5b-CR
5cR
5d-, wherein R
5a, R
5b, R
5c, and R
5d are independently H or halo. In some embodiments, W
2 is -CH
2CH
2-. In some embodiments, W
2 is -CR
5aR
5b-CR
5cR
5d-, wherein R
5a and R
5c are independently H or halo and R
5b and R
5d together with the carbon atoms to which each is attached form a 3- to 7-membered
saturated or partially unsaturated fused carbocyclic ring, optionally substituted
with one to three R
A3, wherein each R
A3 is independently halo, C
1-4alkyl or C
1-4haloalkyl. In some embodiments, W
2 is -CR
5aR
5b-CR
5cR
5d-, wherein R
5a and R
5c are independently H or halo and R
5b and R
5d together with the carbon atoms to which each is attached form a 3- to 5-membered
saturated fused carbocyclic ring. In some embodiments, W
2 is -CHR
5b-CHR
5d-, wherein R
5b and R
5d together with the carbon atoms to which each is attached form a 3-, 4-, or 5-membered
saturated fused carbocyclic ring. In some embodiments, W
2 is

In some embodiments, W
2 is -CR
6a=CR
6b-. In some embodiments, W
2 is - CR
6a=CR
6b-, wherein R
6a and R
6b are independently H, halo, C
1-4haloalkyl, or C
1-4alkyl. In some embodiments, W
2 is -CR
6a=CR
6b-, wherein R
6a and R
6b are independently H or halo. In some embodiments, W
2 is -CH=CH-. In some embodiments, W
2 is -CR
6a=CR
6b-, wherein R
6a and R
6b together with the carbon atoms to which each is attached form a 5- to 10-membered
partially unsaturated fused ring containing 0 heteroatoms or 1 heteroatom selected
from N, O, and S, or a 5- to 10-membered fused aromatic ring, or a 5- to 10-membered
fused heteroaromatic ring containing 1 to 2 heteroatoms selected from N, O and S,
wherein the partially unsaturated fused ring, fused aromatic ring, or fused heteroaromatic
ring is optionally substituted with one to four R
A4, wherein each R
A4 is independently halo or C
1-4alkyl. In some embodiments, W
2 is - CR
6a=CR
6b-, wherein R
6a and R
6b together with the carbon atoms to which each is attached form a 5- to 10-membered
partially unsaturated fused ring containing 0 heteroatoms or 1 heteroatom selected
from N, O, and S, optionally substituted with one to four R
A4, wherein each R
A4 is independently halo or C
1-4alkyl. In some embodiments, W
2 is -CR
6a=CR
6b-, wherein R
6a and R
6b together with the carbon atoms to which each is attached form a 5- to 10-membered
fused aromatic ring, optionally substituted with one to four R
A4, wherein each R
A4 is independently halo or C
1-4alkyl. In some embodiments, W
2 is -CR
6a=CR
6b-, wherein R
6a and R
6b together with the carbon atoms to which each is attached form a 5- to 10-membered
fused heteroaromatic ring containing 1 to 2 heteroatoms selected from N, O and S,
optionally substituted with one to four R
A4, wherein each R
A4 is independently halo or C
1-4alkyl. In some embodiments, W
2 is - CR
6a=CR
6b-, wherein R
6a and R
6b together with the atoms to which each is attached form a fused 1,2-phenylene ring,
optionally substituted with one to four R
A4, wherein each R
A4 is independently halo or C
1-4alkyl. In some embodiments, W
2 is

wherein p is 0, 1, 2, 3, or 4. In some embodiments, W
2 is

wherein each R
A4 is independently halo. In some embodiments, W
2 is

wherein each R
A4 is independently halo and p is 0, 1, 2, or 3. In some embodiments, W
2 is

wherein each R
A4 is independently halo and p is 0, 1, or 2. In some embodiments, W
2 is

In some embodiments, W
2 is

In some embodiments, W
2 is -N(R
7)-. In some embodiments, W
2 is -N(R
7)-, wherein R
7 is H, C
1-4alkyl, C
1-4haloalkyl, C(O)R
c, or SO
2R
c. In some embodiments, W
2 is -N(R
7)-, wherein R
7 is H, C
1-4alkyl, C(O)R
c, or SO
2R
c. In some embodiments, W
2 is -NH-. In some embodiments, W
2 is - N(CH
3)-. In some embodiments, W
2 is -N(CH(CH
3)
2)-. In some embodiments, W
2 is - N(C(O)R
c)-. In some embodiments, W
2 is -N(C(O)CH
3)-. In some embodiments, W
2 is - N(SO
2R
c)-. In some embodiments, W
2 is -N(SO
2CH
3)-. In some embodiments, W
2 is -O-. In some embodiments, W
2 is -CR
5aR
5b-N(R
7)-. In some embodiments, W
2 is -CH
2-N(R
7)-. In some embodiments, W
2 is-CR
5aR
5b-O-. In some embodiments, W
2 is or -CH
2-O-. In some embodiments, W
2 is -CH
2-, -CH
2CH
2-, -CH=CH-,

-NH-, -N(CH
3)-, - N(CH(CH
3)
2)-, -N(C(O)CH
3)-, -N(SO
2CH
3)-, -O-, or -CH
2-O-.
[0081] In some embodiments of the compound of formula
I, II, IIIa, IIIb, IV, Va, or
Vb, the compound has a formula
(X):

[0082] In some embodiments of the compound of formula
I, II, IIIa, IIIb, IV, Va, or
Vb, the compound has a formula
(Xa):

[0083] In some embodiments of the compound of formula
I, II, IIIa, IIIb, IV, Va, or
Vb, the compound has a formula
(Xb):

[0084] In some embodiments of the compound of formula I,
II, IIIa, IIIb, IV, Va, or
Vb, the compound has a formula
(XI):

[0085] In some embodiments of the compound of formula
I, II, IIIa, IIIb, IV, Va, Vb or
X, the compound has a formula
(XIa):

[0086] In some embodiments, the compound of formula I,
II, IIIa, IIIb, IV, Va, Vb or
X has a formula
(XIb):

[0087] In some embodiments, of the compounds of Formula
X, Xa, Xb, XI, XIa, or
XIb, or the pharmaceutically acceptable salt thereof, X is bond or -CR
8aR
8b-; wherein R
8a and R
8b are each independently H, hydroxyl, -O-C
1-4alkyl, C
1-4alkylene-O-C
1-4alkyl, C
1-6alkyl, C
1-4haloalkyl, cyano, or halo. In some embodiments, X is bond. In some embodiments, X
is-CR
8aR
8b-; wherein R
8a and R
8b are each independently H, hydroxyl, -O-C
1-4alkyl, C
1-4alkylene-O-C
1-4alkyl, C
1-6alkyl, C
1-4haloalkyl, cyano, or halo. In some embodiments, X is-CR
8aR
8b-; wherein R
8a and R
8b are each independently H, C
1-6alkyl, C
1-4haloalkyl, or halo. In some embodiments, R
8a and R
8b are each independently H, -CH
3, -CHF
2, -CH
2F, or halo.
[0088] In some embodiments, for the compound of Formula
X, Xa, Xb, XI, XIa, or
XIb, or the pharmaceutically acceptable salt thereof, Z is -CR
9aR
9b- or -CR
9aR
9bCR
9cR
9d-; wherein R
9a, R
9b, R
9c, and R
9d are each independently H, C
1-6alkyl, or C
1-4haloalkyl. In some embodiments, Z is -CR
9aR
9b-. In some embodiment, Z is -CR
9aR
9bCR
9cR
9d-. In some embodiments, R
9a, R
9b, R
9c, and R
9d are each independently H, -CH
3, -CHF
2, or -CH
2F.
[0089] In some embodiments for the compounds of formula
XI, XIa, or
XIb, or the pharmaceutically acceptable salt thereof, each R
6a and R
6b is independently H, halo, C
1-4haloalkyl, or C
1-6alkyl.
[0090] In some embodiments for the compounds of formula
X, Xa, or
Xb, or the pharmaceutically acceptable salt thereof, each R
5a, R
5b, R
5c, and R
5d is independently H, halo, C
1-4haloalkyl, or C
1-6alkyl.
[0091] In some embodiments of the compound of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa, VIIb, X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, X is a bond. In some embodiments,
X is -CR
8aR
8b-. In some embodiments, X is -CR
8aR
8b-, wherein R
8a and R
8b are independently H, hydroxyl, C
1-4alkyl, or halo. In some embodiments, X is - CR
8aR
8b-, wherein R
8a is H, fluoro, or hydroxyl and R
8b is H or fluoro. In some embodiments, X is -CH
2-. In some embodiments, X is -CF
2-. In some embodiments, X is -CH(F)-. In some embodiments, X is -CH(OH)-. In some
embodiments, X is -CH(CH
3)-. In some embodiments, X is -CF(CH
3)-. In some embodiments, X is -CH
2-, -CF
2-, -CH(F)-, -CH(OH)-, -CH(CH
3) or -CF(CH
3)-. In some embodiments, X is -CR
8aR
8b-, wherein R
8a and R
8b together with the carbon to which they are attached form a 3-, 4-, or 5-membered
saturated spiro ring containing 0 to 2 heteroatoms selected from N, O, and S, wherein
the spiro ring is optionally substituted with one to four R
A5, wherein each R
A5 is independently halo, C
1-4alkyl or C
1-4haloalkyl. In some embodiments, X is -CR
8aR
8b-, wherein R
8a and R
8b together with the carbon to which they are attached form a 3- to 5-membered saturated
spiro ring containing 0 heteroatoms, wherein the spiro ring is optionally substituted
with one to four R
A5, wherein each R
A5 is independently halo, C
1-4alkyl or C
1-4haloalkyl. In some embodiments, X is -CR
8aR
8b-, wherein R
8a and R
8b together with the carbon to which they are attached form an spiro cyclopropane ring.
[0092] In some embodiments of the compounds of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa, VIIb, X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, X is a bond or -CR
8aR
8b-, wherein R
8a and R
8b are independently H, hydroxyl, -O-C
1-4alkyl, C
1-4alkyl, C
1-4haloalkyl, or halo, or wherein R
8a and R
8b together with the carbon to which they are attached form a 3 to 5-membered saturated
spiro ring containing 0 to 2 heteroatoms selected from N, O, and S, wherein the spiro
ring is optionally substituted with one to four R
A5, wherein each R
A5 is independently halo, C
1-4alkyl or C
1-4haloalkyl.
[0093] In some embodiments of the compounds of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa, VIIb, X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, X is a bond or -CR
8aR
8b-, wherein R
8a and R
8b are independently H, hydroxyl, -O-C
1-4alkyl, C
1-4alkyl, C
1-4haloalkyl, or halo, or wherein R
8a and R
8b together with the carbon to which they are attached form a 3 to 5-membered saturated
spiro heterocyclic ring containing 1 or 2 heteroatoms selected from N, O, and S, wherein
the spiro ring is optionally substituted with one to four R
A5, wherein each R
A5 is independently halo, C
1-4alkyl or C
1-4haloalkyl. In some embodiments, X is a bond or -CR
8aR
8b-, wherein R
8a and R
8b are independently H, hydroxyl, -O-C
1-4alkyl, C
1-4alkyl, C
1-4haloalkyl, or halo, or wherein R
8a and R
8b together with the carbon to which they are attached form a 3 to 5-membered saturated
spiro heterocyclic ring containing 1 or 2 heteroatoms selected from N, O, and S.
[0094] In some embodiments of the compounds of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa, VIIb, X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, X is a bond or -CR
8aR
8b-, wherein R
8a and R
8b are independently H, hydroxyl, -O-C
1-4alkyl, C
1-4alkyl, C
1-4haloalkyl, or halo, or wherein R
8a and R
8b together with the carbon to which they are attached form a 3-5 membered saturated
spiro carbocyclic ring, wherein the a 3-5 membered saturated spiro carbocyclic ring
is optionally substituted with one to four R
A5, wherein each R
A5 is independently halo, C
1-4alkyl or C
1-4haloalkyl. In some embodiments, X is a bond or - CR
8aR
8b-, wherein R
8a and R
8b are independently H, hydroxyl, -O-C
1-4alkyl, C
1-4alkyl, C
1-4haloalkyl, or halo, or wherein R
8a and R
8b together with the carbon to which they are attached form a 3-5 membered saturated
spiro carbocyclic ring.
[0095] In some embodiments of the compounds of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa, VIIb, X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, X is a bond or -CR
8aR
8b-, wherein R
8a and R
8b are independently H, hydroxyl, -O-C
1-4alkyl, C
1-4alkyl, C
1-4haloalkyl, or halo, or wherein R
8a and R
8b together with the carbon to which they are attached form a 3-membered saturated spiro
carbocyclic ring, wherein the 3 membered saturated spiro carbocyclic ring is optionally
substituted with one to four R
A5, wherein each R
A5 is independently halo, C
1-4alkyl or C
1-4haloalkyl. In some embodiments, X is a bond or -CR
8aR
8b-, wherein R
8a and R
8b are independently H, hydroxyl, -O-C
1-4alkyl, C
1-4alkyl, C
1-4haloalkyl, or halo, or wherein R
8a and R
8b together with the carbon to which they are attached form a 3-membered saturated spiro
carbocyclic ring.
[0096] In some embodiments of the compounds of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa, VIIb, X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, X is a bond, -CH
2-, -CF
2-, -CH(F)-, -CH(Cl)-, -CH(OH)-, -C(CH
2F)(OH)-, -C(CH
3)(OH)-, - CH(OCH
3)-, -C(CH
2CH
3)(OCH
3)-, -C(CH
2CH
3)(OH)-, -CH(CH
3)-, -CH(CH
2CH
3)-, - CF(CH
3)-, -CF(CH
2CH
3)-, or -CR
8aR
8b-, wherein R
8a and R
8b together with the carbon to which they are attached form a 3-membered saturated spiro
carbocyclic ring. In some embodiments, X is a bond, -CH
2-, -CF
2-, -CH(F)-, -CH(Cl)-, -CH(OH)-, -C(CH
2F)(OH)-, - C(CH
3)(OH)-, -CH(OCH
3)-, -C(CH
2CH
3)(OCH
3)-, -C(CH
2CH
3)(OH)-, -CH(CH
3)-, - CH(CH
2CH
3)-, -CF(CH
3)-, or -CF(CH
2CH
3).
[0097] In some embodiments, X is a bond, -CH
2-, -CF
2-, -CH(F)-, -CH(Cl)-, -CH(OH)-, -C(CH
2F)(OH)-, -C(CH
3)(OH)-, -CH(OCH
3)-, -C(CH
2CH
3)(OCH
3)-, -C(CH
2CH
3)(OH)-, - CH(CH
3)-, -CH(CH
2CH
3)-, -CF(CH
3)-, -CF(CH
2CH
3)-, -C(CH
2F)(H)-, or -CR
8aR
8b-, wherein R
8a and R
8b together with the carbon to which they are attached form a 3-membered saturated spiro
carbocyclic ring. In some embodiments, X is a bond, -CH
2-, -CF
2-, -CH(F)-, - CH(Cl)-, -CH(OH)-, -C(CH
2F)(OH)-, -C(CH
3)(OH)-, -CH(OCH
3)-, -C(CH
2CH
3)(OCH
3)-, - C(CH
2CH
3)(OH)-, -CH(CH
3)-, -CH(CH
2CH
3)-, -CF(CH
3)-, -C(CH
2F)(H)-, or- CF(CH
2CH
3)-.
[0098] In some embodiments of the compounds of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa, VIIb, X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, X is - CR
8aR
8b-, wherein R
8a and R
8b together with the carbon to which they are attached form a 3 to 5-membered saturated
spiro ring containing 0 to 2 heteroatoms selected from N, O, and S, wherein the spiro
ring is optionally substituted with one to four R
A5, wherein each R
A5 is independently halo, C
1-4alkyl or C
1-4haloalky. In some embodiments, X is -CR
8aR
8b-, wherein R
8a and R
8b together with the carbon to which they are attached form a 3-5 membered saturated
spiro carbocyclic ring, wherein the a 3-5 membered saturated spiro carbocyclic ring
optionally substituted with one to four R
A5, wherein each R
A5 is independently halo, C
1-4alkyl or C
1-4haloalkyl. In some embodiments. X is -CR
8aR
8b-, wherein R
8a and R
8b together with the carbon to which they are attached form a 3-membered spiro carbocyclic
ring. In some embodiments, X is -CR
8aR
8b-, wherein R
8a and R
8b together with the carbon to which they are attached form a 3 to 5-membered saturated
spiro heterocyclic ring containing 1 or 2 heteroatoms selected from N, O, and S, wherein
the a 3 to 5-membered saturated spiro heterocyclic ring optionally substituted with
one to four R
A5, wherein each R
A5 is independently halo, C
1-4alkyl or C
1-4haloalkyl. In some embodiments. X is -CR
8aR
8b-, wherein R
8a and R
8b together with the carbon to which they are attached form a 3 to 5-membered saturated
spiro heterocyclic ring containing 1 or 2 heteroatoms selected from N, O, and S.
[0099] In some embodiments, the compound of formula
I or
II is a compound of formula
(VIII):

or a pharmaceutically acceptable salt thereof, wherein R
1, L, W
1, W
2, and Z are as defined in formula
I.
[0100] In some embodiments of the compound of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa, VIIb, VIII, X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, Z is -CR
9aR
9b-. In some embodiments, Z is -CR
9aR
9b-, wherein R
9a and R
9b are independently H, C
1-4alkyl, C
1-4haloalkyl, or halo. In some embodiments, Z is -CR
9aR
9b-, wherein R
9a and R
9b are independently H or C
1-4alkyl. In some embodiments, Z is -CH
2-. In some embodiments, Z is - CH(CH
3)-. In some embodiments, Z is -CR
9aR
9b-CR
9cR
9d-. In some embodiments, Z is - CR
9aR
9b-CR
9cR
9d-,wherein R
9a, R
9b, R
9c, and R
9d are independently H, C
1-4alkyl, C
1-4haloalkyl, or halo. In some embodiments, Z is -CH
2-CH
2-. In some embodiments, Z is -CR
10a=CR
10b-. In some embodiments, Z is -CR
10a=CR
10b-, wherein R
10a and R
10b. In some embodiments, Z is - CR
10a=CR
10b-, wherein R
10a and R
10b together with the carbon atoms to which each is attached form a 5- to 10-membered
partially unsaturated fused ring containing 0 heteroatoms or 1 heteroatom selected
from N, O, and S, or a 5- to 10-membered fused aromatic ring, or a 5- to 10-membered
fused heteroaromatic ring containing 1 to 2 heteroatoms selected from N, O and S,
wherein the partially unsaturated fused ring, fused aromatic ring, or fused heteroaromatic
ring is optionally substituted with one to four R
A7, wherein each R
A7 is independently halo or C
1-4alkyl. In some embodiments, Z is -CR
10a=CR
10b-, wherein R
10a and R
10b together with the carbon atoms to which each is attached form a 5- to 10-membered
partially unsaturated fused ring containing 0 heteroatoms or 1 heteroatom selected
from N, O, and S, optionally substituted with one to four R
A7, wherein each R
A7 is independently halo or C
1-4alkyl. In some embodiments, Z is -CR
10a=CR
10b-, wherein R
10a and R
10b together with the carbon atoms to which each is attached form a 5- to 10-membered
fused aromatic ring, optionally substituted with one to four R
A7, wherein each R
A7 is independently halo or C
1-4alkyl. In some embodiments, Z is -CR
10a=CR
10b-, wherein R
10a and R
10b together with the carbon atoms to which each is attached form a 5- to 10-membered
fused heteroaromatic ring containing 1 to 2 heteroatoms selected from N, O and S,
optionally substituted with one to four R
A7, wherein each R
A7 is independently halo or C
1-4alkyl. In some embodiments, Z is -CR
10a=CR
10b-, wherein R
10a and R
10b together with the atoms to which each is attached form a fused 1,2-phenylene ring,
optionally substituted with one to four R
A7, wherein each R
A7 is independently halo or C
1-4alkyl. In some embodiments, Z is

wherein q is 0, 1, 2, 3, or 4. In some embodiments, Z is

wherein each R
A4 is independently halo. In some embodiments, Z is

wherein each R
A4 is independently halo and q is 0, 1, 2, or 3. In some embodiments, Z is

wherein each R
A4 is independently halo and q is 0, 1, or 2. In some embodiments, Z is

In some embodiments, Z is

In some embodiments, Z is

In some embodiments, Z is -CH
2-, -CH(CH
3)-, -CH
2-CH
2-,

[0101] In some embodiments of the compound of formula
I, II, IIIa, IIIb, or
VIII, or a pharmaceutically acceptable salt thereof, L is -CR
3aR
3b- and R
3a and R
3b are independently H, C
1-4alkyl, C
1-4haloalkyl, or -O-C
1-4alkyl. In some embodiments, R
3a and R
3b are independently H or C
1-4alkyl. In some embodiments, R
3a and R
3b are H. In some embodiments, R
3a and R
3b are C
1-4alkyl. In some embodiments, R
3a is H and R
3b is C
1-4alkyl. In some embodiments, R
3a is H and R
3b is methyl. In some embodiments, R
3a and R
3b together with the carbon atom to which they are attached form a 3- to 7-membered
saturated or partially unsaturated spiro ring containing 0 to 2 heteroatoms selected
from N, O, and S, wherein the spiro ring is optionally substituted with one to three
R
A2, wherein each R
A2 is independently halo, C
1-4alkyl or C
1-4haloalkyl. In some embodiments, R
3a and R
3b together with the carbon atom to which they are attached form a 3-, 4-, or 5-membered
saturated or partially unsaturated spiro ring containing 0 to 2 heteroatoms selected
from N, O, and S, wherein the spiro ring is optionally substituted with one to three
R
A2, wherein each R
A2 is independently halo, C
1-4alkyl or C
1-4haloalkyl. In some embodiments, R
3a and R
3b together with the carbon atom to which they are attached form a 3- or 4-membered
saturated spiro ring containing 0 heteroatoms or 1 heteroatom selected from N, O,
and S, wherein the spiro ring is optionally substituted with one to three R
A2, wherein each R
A2 is independently halo, C
1-4alkyl or C
1-4haloalkyl. In some embodiments, R
3a and R
3b together with the carbon atom to which they are attached form a 3-membered saturated
spiro ring containing 0 heteroatoms or 1 heteroatom selected from N, O, and S, wherein
the spiro ring is optionally substituted with one to three R
A2, wherein each R
A2 is independently halo, C
1-4alkyl or C
1-4haloalkyl. In some embodiments, R
3a and R
3b together with the carbon atom to which they are attached form a spiro cyclopropane
ring.
[0102] In some embodiments of the compound of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa, VIIb, or
VIII, or a pharmaceutically acceptable salt thereof, W
1 is -CR
4aR
4b- and R
4a and R
4b are independently H, C
1-4alkyl, C
1-4haloalkyl, or halo. In some embodiments, R
4a and R
4b are independently H or halo. In some embodiments, R
4a and R
4b are H. In some embodiments, R
4a and R
4b are halo. In some embodiments, R
4a and R
4b are fluoro. In some embodiments, R
4a is H and R
4b is halo. In some embodiments, R
4a is H and R
4b is fluoro.
[0103] In some embodiments of the compound of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa, VIIb, VIII, X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, W
2 is -CR
5aR
5b- and R
5a and R
5b are independently H, C
1-4alkyl, C
1-4haloalkyl, halo, hydroxyl, cyano, -O-C
1-4alkyl, or C
1-4alkylene-O-C
1-4alkyl. In some embodiments, R
5a and R
5b are independently H, C
1-4alkyl, C
1-4haloalkyl, halo, or hydroxyl. In some embodiments, R
5a and R
5b are independently H or halo. In some embodiments, R
5a and R
5b are H. In some embodiment, R
5a and R
5b are halo. In some embodiments, R
5a and R
5b are fluoro. In some embodiments, R
5a is H and R
5b is halo. In some embodiments, R
5a is H and R
5b is fluoro. In some embodiments, R
5a and R
5b together with the carbon atom to which they are attached form a 3- to 7-membered
saturated or partially unsaturated spiro ring containing 0 to 2 heteroatoms selected
from N, O, and S, wherein the spiro ring is optionally substituted with one to three
R
A3, wherein each R
A3 is independently halo, C
1-4alkyl or C
1-4haloalkyl. In some embodiments, R
5a and R
5b together with the carbon atom to which they are attached form a 3-, 4-, or 5-membered
saturated or partially unsaturated spiro ring containing 0 to 2 heteroatoms selected
from N, O, and S, wherein the spiro ring is optionally substituted with one to three
R
A3, wherein each R
A3 is independently halo, C
1-4alkyl or C
1-4haloalkyl. In some embodiments, R
5a and R
5b together with the carbon atom to which they are attached form a 3- or 4-membered
saturated spiro ring containing 0 heteroatoms or 1 heteroatom selected from N, O,
and S, wherein the spiro ring is optionally substituted with one to three R
A3, wherein each R
A3 is independently halo, C
1-4alkyl or C
1-4haloalkyl. In some embodiments, R
5a and R
5b together with the carbon atom to which they are attached form a 3-membered saturated
spiro ring containing 0 heteroatoms or 1 heteroatom selected from N, O, and S, wherein
the spiro ring is optionally substituted with one to three R
A3, wherein each R
A3 is independently halo, C
1-4alkyl or C
1-4haloalkyl. In some embodiments, R
5a and R
5b together with the carbon atom to which they are attached form a spiro cyclopropane
ring.
[0104] In some embodiments of the compound of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa, VIIb, VIII, X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, W
2 is -CR
5aR
5bCR
5cR
5d- and R
5a, R
5b, R
5c, and R
5d are independently H, C
1-4alkyl, C
1-4haloalkyl, halo, hydroxyl, cyano, -O-C
1-4alkyl, or C
1-4alkylene-O-C
1-4alkyl. In some embodiments, R
5a, R
5b, R
5c, and R
5d are independently H, C
1-4alkyl, C
1-4haloalkyl, halo, or hydroxyl. In some embodiments, R
5a, R
5b, R
5c, and R
5d are independently H or halo. In some embodiments, R
5a, R
5b, R
5c, and R
5d are H. In some embodiments, R
5a and R
5c are independently H or halo and R
5b and R
5d together with the carbon atoms to which each is attached form a 3- to 7-membered
saturated or partially unsaturated fused carbocyclic ring, optionally substituted
with one to three R
A3, wherein each R
A3 is independently halo, C
1-4alkyl or C
1-4haloalkyl. In some embodiments, R
5a and R
5c are independently H or halo and R
5b and R
5d together with the carbon atoms to which each is attached form a 3-, 4-, or 5-membered
saturated fused carbocyclic ring. In some embodiments, R
5a and R
5c are H and R
5b and R
5d together with the carbon atoms to which each is attached form a 3-, 4-,or 5-membered
saturated fused carbocyclic ring. In some embodiments, R
5a and R
5c are H and R
5b and R
5d together with the carbon atoms to which each is attached form a fused cyclopropane
ring.
[0105] In some embodiments of the compound of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa, VIIb, VIII, X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, W
2 is -CR
6a=CR
6b- and R
6a and R
6b are independently H, halo, C
1-4haloalkyl, or C
1-4alkyl. In some embodiments, R
6a and R
6b are independently H or halo. In some embodiments, R
6a and R
6b are H. In some embodiments, R
6a and R
6b together with the atoms to which each is attached form a 5- to 10-membered fused
aromatic ring, optionally substituted with one to four R
A4, wherein each R
A4 is independently halo or C
1-4alkyl. In some embodiments, R
6a and R
6b together with the atoms to which each is attached form a fused 1,2-phenylene ring,
optionally substituted with one to four R
A4, wherein each R
A4 is independently halo or C
1-4alkyl. In some embodiments, R
6a and R
6b together with the atoms to which each is attached form

wherein p is 0, 1, 2, 3, or 4. In some embodiments, R
6a and R
6b together with the atoms to which each is attached form

wherein each R
A4 is independently halo. In some embodiments, R
6a and R
6b together with the atoms to which each is attached form

wherein each R
A4 is independently halo and p is 0, 1, 2, or 3. In some embodiments, R
6a and R
6b together with the atoms to which each is attached form

wherein each R
A4 is independently halo and p is 0, 1, or 2. In some embodiments, R
6a and R
6b together with the atoms to which each is attached form

In some embodiments, R
6a and R
6b together with the atoms to which each is attached form

[0106] In some embodiments of the compound of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa, VIIb, VIII, X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, W
2 is -N(R
7)- and R
7 is H, C
1-4alkyl, C
1-4haloalkyl, C(O)R
c, or SO
2R
c. In some embodiments, R
7 is H, C
1-4alkyl, C(O)R
c, or SO
2R
c. In some embodiments, R
7 is H. In some embodiments, R
7 is C
1-4alkyl. In some embodiments, R
7 is methyl or 1-methylethyl. In some embodiments, R
7 is C(O)R
c. In some embodiments, R
7 is -C(O)-C
1-4alkyl. In some embodiments, R
7 is -C(O)CH
3. In some embodiments, R
7 is SO
2R
c. In some embodiments, R
7 is -SO
2-C
1-4alkyl. In some embodiments, R
7 is -SO
2CH
3.
[0107] In some embodiments of the compound of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa, VIIb, VIII, X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, W
2 is selected from the group consisting of -CR
5aR
5b-, -CR
5aR
5bCR
5cR
5d-, -CR
6a=CR
6b-, -N(R
7)-, -O-, -S(O)
n-, -C(O)-, -CR
5aR
5b-C(O)-, and -CR
5aR
5b-O-; wherein each R
5a, R
5b, R
5c, and R
5d are independently H, C
1-4alkyl, C
1-4haloalkyl, halo, hydroxyl, cyano, -O-C
1-4alkyl, or C
1-4alkylene-O-C
1-4alkyl; or R
5a and R
5b, R
5c and R
5d, R
5a and R
5c, or R
5b and R
5d together with the carbon atoms to which each is attached form a 3 to 7 membered saturated
or partially unsaturated carbocyclic ring, optionally substituted with one to three
R
A3, wherein each R
A3 is independently halo, C
1-4alkyl or C
1-4haloalkyl; each R
6a and R
6b are independently H, halo, C
1-4haloalkyl, or C
1-4alkyl; or R
6a and R
6b together with the atoms to which each is attached form (i) a 5 to 10 membered fused
aromatic ring or (ii) a 5 to 10 membered fused heteroaromatic ring containing 1 to
2 heteroatoms selected from N, O and S, wherein the 5-10 membered fused aromatic ring
or the 5-10-membered fused heteroaromatic ring is optionally substituted with one
to four R
A4, wherein each R
A4 is independently halo or C
1-4alkyl; R
7 is H, C
1-4alkyl, C
1-4haloalkyl, C(O)R
c, or SO
2R
c; R
c is a C
1-4alkyl; and n is 0, 1, or 2.
[0108] In some embodiments of the compound of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa, VIIb, VIII, X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, W
2 is selected from the group consisting of -CR
5aR
5b-, -CR
5aR
5bCR
5cR
5d-, -CR
6a=CR
6b-, -N(R
7)-, -O-, -S(O)
n-, -C(O)-, -CR
5aR
5b-C(O)-, and -CR
5aR
5b-O-; wherein each R
5a, R
5b, R
5c, and R
5d are independently H, C
1-4alkyl, C
1-4haloalkyl, halo, hydroxyl, cyano, -O-C
1-4alkyl, or C
1-4alkylene-O-C
1-4alkyl; or R
5a and R
5b, R
5c and R
5d, R
5a and R
5c, or R
5b and R
5d together with the carbon atoms to which each is attached form a 3 membered carbocyclic
ring, optionally substituted with one to three R
A3, wherein each R
A3 is independently halo, C
1-4alkyl or C
1-4haloalkyl; each R
6a and R
6b are independently H, halo, C
1-4haloalkyl, or C
1-4alkyl; or R
6a and R
6b together with the atoms to which each is attached form (i) a fused phenyl ring or
(ii) a 5-6 membered fused heteroaromatic ring containing 1 to 2 heteroatoms selected
from N, O and S, wherein the fused phenyl ring or the 5-6 membered fused heteroaromatic
ring is optionally substituted with one to four R
A4, wherein each R
A4 is independently halo or C
1-4alkyl; R
7 is H, C
1-4alkyl, C
1-4haloalkyl, C(O)R
c, or SO
2R
c; Rc is a C
1-4alkyl; and n is 0, 1, or 2.
[0109] In some embodiments of the compound of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa, VIIb, VIII, X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, W
2 is selected from the group consisting of -CR
5aR
5b-, -CR
5aR
5bCR
5cR
5d-, -CR
6a=CR
6b-, -N(R
7)-, -O-, -S(O)
n-, -C(O)-, -CR
5aR
5b-C(O)-, and -CR
5aR
5b-O-; wherein each R
5a, R
5b, R
5c, and R
5d are independently H, C
1-4alkyl, halo, hydroxyl, or -O-C
1-4alkyl; or R
5a and R
5b, R
5c and R
5d, R
5a and R
5c, or R
5b and R
5d together with the carbon atoms to which each is attached form a 3-membered carbocyclic
ring; each R
6a and R
6b are independently H, halo, or C
1-4alkyl; or R
6a and R
6b together with the atoms to which each is attached form (i) a fused phenyl ring or
(ii) a 5-6 membered fused heteroaromatic ring containing 1 to 2 heteroatoms selected
from N and O, wherein the fused phenyl ring or the 5-6 membered fused heteroaromatic
ring is optionally substituted with one or two R
A4, wherein each R
A4 is independently halo or C
1-4alkyl; R
7 is H, C
1-4alkyl, C
1-4haloalkyl, C(O)R
c, or SO
2R
c; R
c is a C
1-4alkyl; and n is 0 or 1.
[0110] In some embodiments, W
2 is selected from the group consisting of -CR
5aR
5b-, CR
5aR
5bCR
5cR
5d-, -CR
6=CR
6b-, -N(R
7)-, -O-, -S(O)
n-, -C(O)-, -CR
5aR
5b-C(O)-, and - CR
5aR
5b-O-; wherein each R
5a, R
5b, R
5c, and R
5d are independently H, -CH
3, halo, hydroxyl, or -OCH
3; or R
5a and R
5b, R
5c and R
5d, R
5a and R
5c, or R
5b and R
5d together with the carbon atoms to which each is attached form a 3-membered carbocyclic
ring; each R
6a and R
6b are independently H, halo, or CH
3; or R
6a and R
6b together with the atoms to which each is attached form (i) a fused phenyl ring or
(ii) a 5 membered fused heteroaromatic ring containing 1 to 2 heteroatoms selected
from N and O, wherein the fused phenyl ring or the 5-6 membered fused heteroaromatic
ring is optionally substituted with one or two R
A4, wherein each R
A4 is independently halo or CH
3; R
7 is H, -CH
3, -CH(CH
3)
2, -CF
3, -C(O)R
c, or -SO
2R
c; R
c is -CH
3; and n is 0 or 1.
[0111] In some embodiments, W
2 is selected from the group consisting of -CR
5aR
5b-, CR
5aR
5bCR
5cR
5d-, -CR
6a=CR
6b-, -N(R
7)-, -O-, -S(O)
n-, -C(O)-, -CR
5aR
5b-C(O)-, and - CR
5aR
5b-O-; wherein each R
5a, R
5b, R
5c, and R
5d are independently H, -CH
3, halo, hydroxyl, or -OCH
3; each R
6a and R
6b are independently H, halo, or -CH
3; R
7 is H, -CH
3, -CH(CH
3)
2, -CF
3, -C(O)R
c, or -SO
2R
c; R
c is -CH
3; and n is 0 or 1.
[0112] In some embodiments of the compound of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa, VIIb, VIII, X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, X is -CR
8aR
8b- and R
8a and R
8b are independently H, hydroxyl, -O-C
1-4alkyl, C
1-4alkylene-O-C
1-4alkyl, C
1-4alkyl, C
1-4haloalkyl, cyano, or halo. In some embodiments, R
8a and R
8b are independently H, hydroxyl, C
1-4alkyl, or halo. In some embodiments, R
8a is H, fluoro, or hydroxyl and R
8b is H or fluoro. In some embodiments, R
8a and R
8b are H. In some embodiments, R
8a and R
8b are fluoro. In some embodiments, R
8a is H and R
8b is halo. In some embodiments, R
8a is H and R
8b is fluoro. In some embodiments, R
8a is H and R
8b is hydroxyl. In some embodiments, R
8a is H and R
8b is C
1-4alkyl. In some embodiments, R
8a is H and R
8b is methyl. In some embodiments, R
8a is halo and R
8b is C
1-4alkyl. In some embodiments, R
8a is fluoro and R
8b is methyl. In some embodiments, R
8a and R
8b together with the carbon to which they are attached form a 3-, 4-, or 5-membered
saturated spiro ring containing 0 to 2 heteroatoms selected from N, O, and S, wherein
the spiro ring is optionally substituted with one to four R
A5, wherein each R
A5 is independently halo, C
1-4alkyl or C
1-4haloalkyl. In some embodiments, R
8a and R
8b together with the carbon to which they are attached form a 3-, 4-, or 5-membered
saturated spiro ring containing 0 heteroatoms, wherein the spiro ring is optionally
substituted with one to four R
A5, wherein each R
A5 is independently halo, C
1-4alkyl or C
1-4haloalkyl. In some embodiments, R
8a and R
8b together with the carbon to which they are attached form an spiro cyclopropane ring.
[0113] In some embodiments of the compound of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa, VIIb, VIII, X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, Z is -CR
9aR
9b- and R
9a and R
9b are independently H, C
1-4alkyl, C
1-4haloalkyl, or halo. In some embodiments, R
9a and R
9b are independently H or C
1-4alkyl. In some embodiments, R
9a and R
9b are H. In some embodiments, R
9a and R
9b are C
1-4alkyl. In some embodiments, R
9a is H and R
9b is C
1-4alkyl. In some embodiments, R
9a is H and R
9b is methyl.
[0114] In some embodiments of the compound of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa, VIIb, VIII, X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, Z is -CR
9aR
9b-CR
9cR
9d- and R
9a, R
9b, R
9c, and R
9d are independently H, C
1-4alkyl, C
1-4haloalkyl, or halo. In some embodiments, R
9a, R
9b, R
9c, and R
9d are independently H or C
1-4alkyl. In some embodiments, R
9a, R
9b, R
9c, and R
9d are H.
[0115] In some embodiments of the compound of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa, VIIb, VIII, X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, Z is -CR
10a=CR
10b- and R
10a and R
10b are independently H, halo, C
1-4haloalkyl, or C
1-4alkyl. In some embodiments, R
10a and R
10b together with the atoms to which each is attached form a 5- to 10-membered fused
aromatic ring or heteroaromatic ring containing 1 to 2 heteroatoms selected from N,
O and S, wherein the aromatic or heteroaromatic ring is optionally substituted with
one to four R
A7, wherein each R
A7 is independently halo or C
1-4alkyl. In some embodiments, R
10a and R
10b together with the atoms to which each is attached form a 5- to 10-membered fused
aromatic ring, optionally substituted with one to four R
A7, wherein each R
A7 is independently halo or C
1-4alkyl. In some embodiments, R
10a and R
10b together with the atoms to which each is attached form a fused 1,2-phenylene ring,
optionally substituted with one to four R
A7, wherein each R
A7 is independently halo or C
1-4alkyl. In some embodiments, R
10a and R
10b together with the atoms to which each is attached form

wherein q is 0, 1, 2, 3, or 4. In some embodiments, R
10a and R
10b together with the atoms to which each is attached form

wherein each R
A4 is independently halo. In some embodiments, R
10a and R
10b together with the atoms to which each is attached form

wherein each R
A4 is independently halo and q is 0, 1, 2, or 3. In some embodiments, R
10a and R
10b together with the atoms to which each is attached form

wherein each R
A4 is independently halo and q is 0, 1, or 2. In some embodiments, R
10a and R
10b together with the atoms to which each is attached form

In some embodiments, R
10a and R
10b together with the atoms to which each is attached form

In some embodiments, R
10a and R
10b together with the atoms to which each is attached form

[0116] In some embodiments of the compound of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa, VIIb, VIII, X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, Z is -CR
9aR
9b-, -CR
9aR
9bCR
9cR
9d-, or -CR
10a=CR
10b-; wherein R
9a, R
9b, R
9c, and R
9d are each independently H, C
1-6alkyl, C
1-4haloalkyl, or halo; or R
9a and R
9b or R
9c and R
9d together with the carbon atom to which they are attached form a 3 to 7 membered saturated
or partially unsaturated ring containing 0 to 2 heteroatoms selected from N, O, and
S, wherein the spiro ring is optionally substituted with one to three R
A6, wherein each R
A6 is independently halo, C
1-4alkyl or C
1-4haloalkyl; R
10a and R
10b are independently H, halo, C
1-4haloalkyl, or C
1-6alkyl; or R
10a and R
10b together with the carbon atoms to which each is attached form (i) a 5-10 membered
partially unsaturated fused ring containing 0 heteroatoms or 1 heteroatom selected
from N, O, and S, (ii) a 5-10 membered fused aromatic ring, or (iii) a 5-10 membered
fused heteroaromatic ring containing 1 to 2 heteroatoms selected from N, O and S,
wherein the 5 to 10 membered partially unsaturated fused ring, 5-10 membered fused
aromatic ring, or 5-10 membered fused heteroaromatic ring is optionally substituted
with one to four R
A7, wherein each R
A7 is independently halo or C
1-4alkyl.
[0117] In some embodiments of the compound of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa, VIIb, or
VIII, or a pharmaceutically acceptable salt thereof, Z is -CR
9aR
9b-, - CR
9aR
9bCR
9cR
9d-, or -CR
10a=CR
10b-; wherein R
9a, R
9b, R
9c, and R
9d are each independently H, CH
3, CH
2CH
3, CHF
2, or halo; or R
9a and R
9b or R
9c and R
9d together with the carbon atom to which they are attached form a 3-membered carbocyclic
ring; R
10a and R
10b are independently H, halo, or CH
3; or R
10a and R
10b together with the carbon atoms to which each is attached form (i) a fused phenyl
ring or (ii) a 5-6 membered fused heteroaromatic ring containing 1 to 2 heteroatoms
selected from N, O and S, wherein the fused phenyl ring or the fused heteroaromatic
ring is optionally substituted with one to two R
A7, wherein each R
A7 is independently halo or CH
3.
[0118] In some embodiments of the compound of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa, VIIb, or
VIII, or a pharmaceutically acceptable salt thereof, wherein
R1 is phenyl substituted with one, two, three, or four RA1, wherein each RA1 is independently halo or -O-C1-4alkyl;
X is a bond or CR8aR8b-, wherein R8a and R8b are independently H, hydroxyl, -O-C1-4alkyl, C1-4alkyl, C1-4haloalkyl, or halo, or R8a and R8b together with the carbon to which they are attached form a 3-membered saturated spiro
carbocyclic ring;
W1 is a bond or -CR4aR4b-; wherein R4a and R4b are independently H, C1-6alkyl, or halo;
W2 is selected from the group consisting of -CR5aR5b-, -CR5aR5bCR5cR5d-, - CR6a=CR6b-, -N(R7)-, -O-, -S(O)n-, -C(O)-, -CR5aR5b-C(O)-, and -CR5aR5b-O-; wherein each R5a, R5b, R5c, and R5d are independently H, C1-4alkyl, halo, hydroxyl, or -O-C1-4alkyl; each R6a and R6b are independently H, halo, or C1-4alkyl; R7 is H, C1-4alkyl, C1-4haloalkyl, C(O)Rc, or SO2Rc; Rc is C1-4alkyl; and n is 0 or 1; and
Z is -CR9aR9b-, -CR9aR9bCR9cR9d-, or -CR10a=CR10b; wherein R9a, R9b, R9c, and R9d are each independently H, C1-6alkyl, C1-4haloalkyl, or halo; or R9a and R9b or R9c and R9d together with the carbon atom to which they are attached form a 3-membered carbocyclic
ring; and R10a and R10b are independently H, halo, C1-4haloalkyl, or C1-6alkyl.
[0119] In some embodiments of the compound of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa, VIIb, or
VIII, or a pharmaceutically acceptable salt thereof,
R1 is phenyl substituted with one, two, three, or four RA1, wherein each RA1 is independently halo or -O-C1-4alkyl;
X is a bond or CR8aR8b-, wherein R8a and R8b are independently H, hydroxyl, -O-C1-4alkyl, C1-4alkyl, C1-4haloalkyl, or halo;
W1 is a bond or -CR4aR4b-; wherein R4a and R4b are independently H, C1-6alkyl, or halo;
W2 is -CR5aR5b-; wherein each R5a and R5b are independently H, C1-4alkyl, halo, hydroxyl, or -O-C1-4alkyl; and
Z is -CR9aR9b-; wherein R9a and R9b are each independently H, C1-6alkyl, C1-4haloalkyl, or halo.
[0120] In some embodiments of the compound of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa, VIIb, VIII, X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, R
a is independently H, C
1-4alkyl, C
1-6haloalkyl, C(O)R
c, or SO
2R
c.
[0121] In some embodiments of the compound of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa, VIIb, VIII, X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, R
b is H. In some embodiments, R
b is C
1-4alkyl. In some embodiments, R
b is methyl.
[0122] In some embodiments of the compound of formula
I,
II,
IIIa,
IIIb,
IV, Va, Vb, VI, VIIa,
VIIb,
VIII, X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof,
Rc is C
1-4alkyl. In some embodiments, R
c is methyl. In some embodiments, R
c is -O-C
1-4alkyl.
[0123] In some embodiments of the compound of formula
I,
II,
IIIa,
IIIb,
IV, Va, Vb, VI,
VIIa,
VIIb, or
VIII, X, Xa, Xb, XI,
XIa, or
XIb, or a pharmaceutically acceptable salt thereof, n is 0. In some embodiments, n is
1. In some embodiments, n is 2.
[0124] In some embodiments, the compound of formula I,
II,
IIIa,
IIIb,
IV, Va, Vb, VI,
VIIa,
VIIb, or
VIII, is a compound of formula
(IX):

or a pharmaceutically acceptable salt thereof, wherein R
1 is H or C
6-10aryl, wherein C
6-10aryl is optionally substituted with one to four R
A1, wherein each R
A1 is independently halo, C
1-6alkyl, C
1-4haloalkyl, cyano, -O-C
1-4alkyl, or C
1-4alkyl-O-C
1-4alkyl.
[0125] In some embodiments, the compound of formula I,
II,
IIIa,
IIIb,
IV, Va, Vb, VI, VIIa,
VIIb,
VIII, or
IX is a compound of formula
(IXa):

[0126] In some embodiments, the compound of formula
I, II,
IIIa,
IIIb,
IV, Va, Vb, VI,
VIIa,
VIIb,
VIII, or
IX is a compound of formula
(IXb):

or a pharmaceutically acceptable salt thereof, wherein R
1 is H or C
6-10aryl, wherein C
6-10aryl is optionally substituted with one to four R
A1, wherein each R
A1 is independently halo, C
1-6alkyl, C
1-4haloalkyl, cyano, -O-C
1-4alkyl, or C
1-4alkyl-O-C
1-4alkyl.
[0127] In some embodiments of the compound of formula
I, II,
IIIa,
IIIb,
IV, Va, Vb, VI, VIIa,
VIIb,
VIII, IX, IXa, IXb,
X, Xa, or
Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, R
1 is H. In some embodiments, R
1 is C
6-10aryl. In some embodiments, R
1 is phenyl, optionally substituted with one to four R
A1, wherein each R
A1 is independently halo, C
1-4alkyl, C
1-4haloalkyl, cyano, -O-C
1-4alkyl, or C
1-4alkyl-O-C
1-4alkyl. In some embodiments, R
1 is phenyl substituted with one, two, three, or four R
A1. In some embodiments, R
1 is phenyl substituted with one, two, three, or four R
A1. In some embodiments, R
1 is phenyl substituted with one, two, three, or four R
A1, wherein each R
A1 is independently halo, C
1-4alkyl, C
1-4haloalkyl, or -O-C
1-4alkyl. In some embodiments, R
1 is phenyl substituted with one, two, three, or four R
A1, wherein each R
A1 is independently halo, C
1-4alkyl, or C
1-4haloalkyl. In some embodiments, R
1 is phenyl substituted with one, two, three, or four R
A1, wherein each R
A1 is independently halo or -O-C
1-4alkyl. In some embodiments, R
1 is phenyl substituted with one, two, three, or four halogens. In some embodiments,
R
1 is phenyl substituted with one, two, or three halogens. In some embodiments, R
1 is phenyl substituted with two or three halogens. In some embodiments, R
1 is phenyl substituted with two or three halogens selected from chloro and fluoro.
In some embodiments, R
1 is

[0128] In some embodiments, of the compound of formula
I, II,
IIIa,
IIIb,
IV, Va, Vb, VI,
VIIa,
VIIb,
VIII, IX, IXa,
IXb,
X, Xa, Xb, XI, XIa, or
XIb, R
1 is selected from the group consisting of

In some embodiments, of the compound of formula I or
II, R
1 is selected from the group consisting of

and

[0131] In some embodiment, the compound of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI,
VIIa, VIIb, VIII, IX, IXa, IXb, X, Xa, Xb, XI, XIa, or
XIb, is selected from the group consisting of:

or a pharmaceutically acceptable salt thereof.
[0132] In some embodiment, the compound of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI,
VIIa,
VIIb,
VIII, IX, IXa, or
IXb,
X, Xa, Xb, XI, XIa, or
XIb, is selected from the group consisting of:

and

and

or a pharmaceutically acceptable salt thereof.
[0133] The compounds of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa, VIIb, VIII, IX,
IXa, IXb,
X, Xa, Xb, XI, XIa, or
XIb, may be described with reference to rings A, B, and C, as depicted below for formula
I:

where A denotes a bridged ring relative to ring B, B denotes a bridged ring relative
to ring A and a fused ring relative to ring C, and C denotes a fused ring relative
to ring B. As noted above, the compounds may have one or more additional fused or
spirocyclic rings.
[0134] When any variable is a non-symmetrical group, both orientations of the group are
intended to be covered, unless specified otherwise. For example, when W
2 is -CR
5aR
5b-N(R
7)-, both orientations of -CR
5aR
5b-N(R
7)- are included (
i.e., both Z-W
1-CR
5aR
5b-N(R
7)-X and Z-W
1-N(R
7)-CR
5aR
5b-X are included), and when Z is

both orientations of

are included (
i.e., both

are included).
[0135] It is understood that any embodiment of the compounds of any one of formulas I,
II,
IIIa, IIIb, IV, Va, Vb, VI, VIIa, VIIb, VIII, IX, IXa, IXb, X, Xa, Xb, XI, XIa, or
XIb, as set forth above, and any specific group or substituent set forth herein (
e.g., R
1, R
2, L, W
1, W
2, X, Y, Z, and substituents thereof) in the compounds of formulas
I, II,
IIIa,
IIIb,
IV, Va, Vb, VI,
VIIa,
VIIb,
VIII, IX, IXa, IXb,
X, Xa, Xb, XI, XIa, or
XIb, as set forth above, may be independently combined with other embodiments and/or
substituents of compounds of any one of formulas I,
II,
IIIa,
IIIb,
IV, Va, Vb, VI, VIIa,
VIIb,
VIII, IX, IXa, IXb,
X, Xa, Xb, XI, XIa, or
XIb, to form embodiments not specifically set forth above. In addition, in the event
that a list of substituents are not listed for any particular R
1, R
2, L, W
1, W
2, X, Y, and Z group in a particular embodiment and/or claim, it is understood that
each individual substituent may be deleted from the particular embodiment and/or claim
and that the remaining list of substituents will be considered to be within the scope
of the embodiments disclosed herein.
Pharmaceutical Compositions
[0136] In another embodiment, pharmaceutical compositions comprising a compound of formula
I,
II,
IIIa,
IIIb,
IV, Va, Vb, VI, VIIa,
VIIb,
VIII, IX, IXa, IXb,
X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, and a pharmaceutically acceptable
excipient are provided.
[0137] In some embodiments, the pharmaceutical compositions further comprise one, two, three,
or four additional therapeutic agents. In certain embodiments, the additional therapeutic
agent or agents are anti-HIV agents. In particular embodiments, the additional therapeutic
agent or agents are HIV protease inhibitors, HIV non-nucleoside or non-nucleotide
inhibitors of reverse transcriptase, HIV nucleoside or nucleotide inhibitors of reverse
transcriptase, HIV capsid inhibitors, gp41 inhibitors, CXCR4 inhibitors, gp120 inhibitors,
CCR5 inhibitors, latency reversing agents, capsid polymerization inhibitors, HIV bNAbs,
TLR7 agonists, pharmacokinetic enhancers, other drugs for treating HIV, or combinations
thereof. In one embodiment, the additional therapeutic agent or agents are abacavir,
tenofovir alafenamide, tenofovir disoproxil, N-((
S)-1-(3-(4-chloro-3-(methylsulfonamido)-1-(2,2,2-trifluoroethyl)-1
H-indazol-7-yl)-6-(3-methyl-3-(methylsulfonyl)but-l-yn-l-yl)pyridin-2-yl)-2-(3,5-difluorophenyl)ethyl)-2-((3b
S,4a
R)-5,5-difluoro-3-(trifluoromethyl)-3b,4,4a,5-tetrahydro-1
H-cyclopropa[3,4]cyclopenta[1,2-
c]pyrazol-1-yl)acetamide, or a pharmaceutically acceptable salt thereof.
Kits and Articles of Manufacture
[0138] In some embodiments, the present disclosure relates to a kit comprising a compound
of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa, VIIb, VIII, IX, IXa, IXb, X, Xa, Xb, XI,
XIa, or
XIb, or a pharmaceutically acceptable salt thereof. In one embodiment, the kit may comprise
one, two, three, or four additional therapeutic agents as described hereinbefore.
The kit may further comprise instructions for use,
e.g., for use in inhibiting an HIV integrase, such as for use in treating an HIV infection
or AIDS, or as a research tool. The instructions for use are generally written instructions,
although electronic storage media (
e.
g., magnetic diskette or optical disk) containing instructions are also acceptable.
[0139] In some embodiments, the present disclosure also relates to a pharmaceutical kit
comprising one or more containers comprising a compound formula
I, II, IIIa, IIIb, IV, Va,
Vb, VI, VIIa, VIIb, VIII, IX, IXa, IXb, X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof. Optionally associated with such container(s)
can be a notice in the form prescribed by a governmental agency regulating the manufacture,
use or sale of pharmaceuticals, which notice reflects approval by the agency for the
manufacture, use or sale for human administration. Each component (if there is more
than one component) can be packaged in separate containers or some components can
be combined in one container where cross-reactivity and shelf life permit. The kits
may be in unit dosage forms, bulk packages (
e.
g., multi-dose packages) or sub-unit doses. Kits may also include multiple unit doses
of the compounds and instructions for use and be packaged in quantities sufficient
for storage and use in pharmacies (
e.
g., hospital pharmacies and compounding pharmacies).
[0140] In some embodiments, disclosed herein are articles of manufacture comprising a unit
dosage of a compound of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa, VIIb, VIII, IX, IXa,
IXb,
X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, in suitable packaging for use in
the methods described herein. Suitable packaging is known in the art and includes,
for example, vials, vessels, ampules, bottles, jars, flexible packaging and the like.
An article of manufacture may further be sterilized and/or sealed.
Methods of Treatment
[0141] In one embodiment, methods of treating an HIV
(e.g., HIV-1 and/or HIV-2) infection in a human having or at risk of having the infection
comprising administering to the human a therapeutically effective amount of a compound
of formula I,
II,
IIIa,
IIIb,
IV, Va, Vb, VI, VIIa, VIIb, VIII, IX, IXa, IXb, X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, or a pharmaceutical composition of
a compound of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa, VIIb, VIII, IX, IXa, IXb, X, Xa, Xb, XI,
XIa, or
XIb, or a pharmaceutically acceptable salt thereof, are provided.
[0142] In some embodiments, the methods further comprise administering to the human a therapeutically
effective amount of one, two, three, or four additional therapeutic agents. In certain
embodiments, the additional therapeutic agent or agents are anti-HIV agents. In particular
embodiments, the additional therapeutic agent or agents are HIV protease inhibitors,
HIV non-nucleoside or non-nucleotide inhibitors of reverse transcriptase, HIV nucleoside
or nucleotide inhibitors of reverse transcriptase, HIV capsid inhibitors, gp41 inhibitors,
CXCR4 inhibitors, gp120 inhibitors, CCR5 inhibitors, latency reversing agents, capsid
polymerization inhibitors, HIV bNAbs (broadly neutralizing HIV antibodies), TLR7 agonists,
pharmacokinetic enhancers, other drugs for treating HIV, or combinations thereof.
In one embodiment, the additional therapeutic agent or agents are abacavir, tenofovir
alafenamide, tenofovir disoproxil, N-((
S)-1-(3-(4-chloro-3-(methylsulfonamido)-1-(2,2,2-trifluoroethyl)-1
H-indazol-7-yl)-6-(3-methyl-3-(methylsulfonyl)but-1-yn-1-yl)pyridin-2-yl)-2-(3,5-difluorophenyl)ethyl)-2-((3b
S,4a
R)-5,5-difluoro-3-(trifluoromethyl)-3b,4,4a,5-tetrahydro-1
H-cyclopropa[3,4]cyclopenta[1,2-
c]pyrazol-l-yl)acetamide, or a pharmaceutically acceptable salt thereof.
[0143] In another embodiment, a use of a compound of formula
I, II, IIIa, IIIb, IV, Va, Vb,
VI, VIIa, VIIb, VIII, IX, IXa, IXb, X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, or a pharmaceutical composition of
a compound of formula
I, II,
IIIa,
IIIb, IV, Va, Vb, VI, VIIa, VIIb, VIII, IX, IXa, IXb, X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, for treating an HIV
(e.g., HIV-1 and/or HIV-2) infection in a human having or at risk of having the infection
is provided.
[0144] In another embodiment, a compound of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI,
VIIa,
VIIb,
VIII, IX, IXa,
IXb,
X, Xa, Xb, XI,
XIa, or
XIb, or a pharmaceutically acceptable salt thereof, or a pharmaceutical composition of
a compound of formula
I, II,
IIIa,
IIIb,
IV, Va, Vb, VI,
VIIa,
VIIb,
VIII, IX, IXa, IXb, X, Xa, Xb, XI,
XIa, or
XIb, or a pharmaceutically acceptable salt thereof, for use in medical therapy is provided.
[0145] In another embodiment, a compound of formula I,
II,
IIIa,
IIIb,
IV, Va, Vb, VI, VIIa,
VIIb,
VIII, IX, IXa, IXb, X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, or a pharmaceutical composition of
a compound of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa, VIIb, VIII, IX, IXa, IXb, X, Xa, Xb, XI,
XIa, or
XIb, or pharmaceutically acceptable salt thereof, for use in treating an HIV infection
is provided.
[0146] In another embodiment, a compound of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI,
VIIa,
VIIb,
VIII, IX, IXa, IXb, X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, or a pharmaceutical composition of
a compound of formula
I, II,
IIIa,
IIIb,
IV, Va, Vb, VI, VIIa, VIIb, VIII, IX, IXa, IXb, X, Xa, Xb, XI,
XIa, or
XIb, or a pharmaceutically acceptable salt thereof for use in a method of treating an
HIV infection in a human having or at risk of having the infection, is provided.
[0147] In another embodiment, a compound of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa,
VIIb,
VIII, IX, IXa, IXb, X, Xa, Xb, XI,
XIa, or
XIb, or a pharmaceutically acceptable salt thereof, or a pharmaceutical composition of
a compound of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa, VIIb, VIII, IX, IXa, IXb, X, Xa, Xb, XI,
XIa, or
XIb, or a pharmaceutically acceptable salt thereof for use in a method of treating an
HIV infection in a human having or at risk of having the infection, is provided wherein
said method further comprises administering to the human one, two, three, or four
additional therapeutic agents.
[0148] In another embodiment, a compound of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa,
VIIb,
VIII, IX, IXa, IXb, X, Xa, Xb, XI,
XIa, or
XIb, or a pharmaceutically acceptable salt thereof, or a pharmaceutical composition of
a compound of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa, VIIb, VIII, IX, IXa, IXb, X, Xa, Xb, XI,
XIa, or
XIb, or a pharmaceutically acceptable salt thereof for use in a method of treating an
HIV infection in a human having or at risk of having the infection, is provided wherein
said method further comprises administering to the human one, two, three, or four
additional therapeutic agents selected from the group consisting of HIV protease inhibitors,
HIV non-nucleoside or non-nucleotide inhibitors of reverse transcriptase, HIV nucleoside
or nucleotide inhibitors of reverse transcriptase, HIV capsid inhibitors, gp41 inhibitors,
CXCR4 inhibitors, gp120 inhibitors, CCR5 inhibitors, latency reversing agents, capsid
polymerization inhibitors, HIV bNAbs, TLR7 agonists, pharmacokinetic enhancers, other
drugs for treating HIV, or combinations thereof. In one embodiment, the one, two,
three, or four additional therapeutic agents are selected from HIV protease inhibitors,
HIV non-nucleoside inhibitors of reverse transcriptase, HIV nucleoside or nucleotide
inhibitors of reverse transcriptase, latency reversing agents, HIV capsid inhibitors,
HIV bNAbs, TLR7 agonists, and combinations thereof.
[0149] In another embodiment, a compound of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa, VIIb, VIII, IX, IXa, IXb, X, Xa, Xb, XI,
XIa, or
XIb, or a pharmaceutically acceptable salt thereof, or a pharmaceutical composition of
a compound of formula
I, II,
IIIa,
IIIb,
IV, Va, Vb, VI, VIIa, VIIb, VIII, IX, IXa, IXb, X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof for use in a method of treating an
HIV infection in a human having or at risk of having the infection, is provided wherein
said method further comprises administering to the human a therapeutically effective
amount of tenofovir disoproxil and emtricitabine.
[0150] In another embodiment, a compound of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa,
VIIb,
VIII, IX, IXa, IXb, X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, or a pharmaceutical composition of
a compound of formula
I, II,
IIIa,
IIIb,
IV, Va, Vb, VI, VIIa, VIIb, VIII, IX, IXa, IXb, X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof for use in a method of treating an
HIV infection in a human having or at risk of having the infection, is provided wherein
said method further comprises administering to the human a therapeutically effective
amount of tenofovir alafenamide and emtricitabine.
[0151] In another embodiment, a compound of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa,
VIIb,
VIII, IX, IXa, IXb, X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, or a pharmaceutical composition of
a compound of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa, VIIb, VIII, IX, IXa, IXb, X, Xa, Xb, XI,
XIa, or
XIb, or a pharmaceutically acceptable salt thereof for use in a method of treating an
HIV infection in a human having or at risk of having the infection, is provided wherein
said method further comprises administering to the human a therapeutically effective
amount of tenofovir disoproxil.
[0152] In another embodiment, a compound of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa,
VIIb,
VIII, IX, IXa, IXb, X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, or a pharmaceutical composition of
a compound of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa, VIIb, VIII, IX, IXa, IXb, X, Xa, Xb, XI,
XIa, or
XIb, or a pharmaceutically acceptable salt thereof for use in a method of treating an
HIV infection in a human having or at risk of having the infection, is provided wherein
said method further comprises administering to the human a therapeutically effective
amount of tenofovir alafenamide.
[0153] In another embodiment, a method of using a compound of formula
I, II,
IIIa,
IIIb,
IV, Va, Vb, VI, VIIa,
VIIb,
VIII, IX, IXa, IXb,
X, Xa, Xb, XI, XIa, or
XIb, in therapy is provided. In particular, a method of treating the proliferation of
the HIV virus, treating AIDS, or delaying the onset of AIDS or ARC symptoms in a mammal
(
e.
g., a human) is provided, comprising administering to the mammal a compound of formula
I, II,
IIIa,
IIIb,
IV, Va, Vb, VI, VIIa,
VIIb,
VIII, IX, IXa, IXb,
X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, and a pharmaceutically acceptable
excipient.
[0154] In another embodiment, a composition comprising a compound of formula
I, II,
IIIa,
IIIb,
IV, Va, Vb, VI, VIIa,
VIIb,
VIII, IX, IXa, IXb,
X, Xa, Xb, XI, XIa, or
XIb, or pharmaceutically acceptable salt thereof, and a pharmaceutically acceptable excipient,
for use in a method of treating the proliferation of the HIV virus, treating AIDS,
or delaying the onset of AIDS or ARC symptoms in a mammal (
e.
g., a human) is provided.
[0155] In one embodiment, a compound of formula
I, II, IIIa,
IIIb,
IV, Va, Vb, VI, VIIa,
VIIb, VIII, IX, IXa, IXb,
X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, or a pharmaceutical composition of
a compound of formula
I, II,
IIIa,
IIIb,
IV, Va, Vb, VI, VIIa,
VIIb, VIII, IX, IXa, IXb,
X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, is provided for use in preventing
HIV infection.
[0156] For example, in one embodiment, a compound of formula
I, II, IIIa,
IIIb,
IV, Va, Vb, VI, VIIa,
VIIb, VIII, IX, IXa, IXb,
X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, or a pharmaceutical composition of
a compound of formula
I, II, IIIa,
IIIb,
IV, Va, Vb, VI, VIIa,
VIIb, VIII, IX, IXa, IXb,
X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, is provided for use in pre-exposure
prophylaxis (PrEP),
i.e., before the exposure of the individual to the HIV virus to prevent HIV infection from
taking hold if the individual is exposed to the virus and/or to keep the virus from
establishing a permanent infection and/or to prevent the appearance of symptoms of
the disease and/or to prevent the virus from reaching detectable levels in the blood.
[0157] In another embodiment, the use of a compound of formula
I, II,
IIIa,
IIIb,
IV, Va, Vb, VI, VIIa,
VIIb,
VIII, IX, IXa, IXb,
X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, for the manufacture of a medicament
for treating an HIV infection in a human being having or at risk of having the infection
is disclosed.
[0158] In another embodiment, the use of a compound of formula
I, II,
IIIa,
IIIb,
IV, Va, Vb, VI, VIIa,
VIIb,
VIII, IX, IXa, IXb,
X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, as a research tool is disclosed.
[0159] In another embodiment, an article of manufacture comprising a composition effective
to treat an HIV infection; and packaging material comprising a label which indicates
that the composition can be used to treat infection by HIV is disclosed. Exemplary
compositions comprise a compound of formula
I, II,
IIIa,
IIIb,
IV, Va, Vb, VI, VIIa,
VIIb, VIII, IX, IXa, IXb,
X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof.
[0160] In still another embodiment, a method of inhibiting the replication of HIV is disclosed.
The method comprises exposing the virus to an effective amount of the compound of
formula
I, II,
IIIa,
IIIb,
IV, Va, Vb, VI, VIIa,
VIIb, VIII, IX, IXa, IXb,
X, Xa, Xb, XI, XIa, or
XIb, or a salt thereof, under conditions where replication of HIV is inhibited.
[0161] In another embodiment, the use of a compound of formula
I, II,
IIIa,
IIIb,
IV, Va, Vb, VI, VIIa,
VIIb,
VIII, IX, IXa, IXb,
X, Xa, Xb, XI, XIa, or
XIb, to inhibit the activity of the HIV integrase enzyme is disclosed.
[0162] In another embodiment, the use of a compound of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa, VIIb, VIII, IX, IXa, IXb, X, Xa, Xb, XI,
XIa, or
XIb, or a salt thereof, to inhibit the replication of HIV is disclosed.
Administration
[0163] For the purposes of administration, in certain embodiments, the compounds described
herein are administered as a raw chemical or are formulated as pharmaceutical compositions.
Pharmaceutical compositions within the scope of the embodiments disclosed herein comprise
a compound of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa, VIIb, VIII, IX,
IXa, IXb, X, Xa, Xb, XI, XIa, or
XIb, and a pharmaceutically acceptable excipient. The compound of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa, VIIb, VIII, IX, IXa, IXb, X, Xa, Xb, XI,
XIa, or
XIb, is present in the composition in an amount which is effective to treat a particular
disease or condition of interest. The activity of compounds of formula
I, II,
IIIa,
IIIb,
IV, Va, Vb, VI, VIIa, VIIb, VIII, IX, IXa, IXb, X, Xa, Xb, XI, XIa, or
XIb, can be determined as described in the Examples below.
[0164] Administration of the compounds of the embodiments disclosed herein, or their pharmaceutically
acceptable salts, in pure form or in an appropriate pharmaceutical composition, can
be carried out via any of the accepted modes of administration of agents for serving
similar utilities. The pharmaceutical compositions of the embodiments disclosed herein
can be prepared by combining a compound of the embodiments disclosed herein with an
appropriate pharmaceutically acceptable excipient, and may be formulated into preparations
in solid, semi-solid, liquid or gaseous forms, such as tablets, capsules, powders,
granules, ointments, solutions, suppositories, injections, inhalants, gels, microspheres,
and aerosols. Typical routes of administering such pharmaceutical compositions include,
without limitation, oral, topical, transdermal, inhalation, parenteral, injectable,
sublingual, buccal, rectal, vaginal, and intranasal. Pharmaceutical compositions of
the embodiments disclosed herein are formulated so as to allow the active ingredients
contained therein to be bioavailable upon administration of the composition to a patient.
Compositions that will be administered to a subject or patient take the form of one
or more dosage units, where for example, a tablet may be a single dosage unit, and
a container of a compound of the embodiments disclosed herein in aerosol form may
hold a plurality of dosage units. Actual methods of preparing such dosage forms are
known, or will be apparent, to those skilled in this art; for example, see
Remington: The Science and Practice of Pharmacy, 20th Edition (Philadelphia College
of Pharmacy and Science, 2000). The composition to be administered will, in any event, contain a therapeutically
effective amount of a compound of the embodiments disclosed herein, or a pharmaceutically
acceptable salt thereof, for treating a disease or condition of interest in accordance
with the teachings of this disclosure.
[0165] In one embodiment, the pharmaceutical composition is an oral dosage unit. In one
embodiment, the pharmaceutical composition is a solid oral dosage unit. In one embodiment,
the pharmaceutical composition is a tablet.
[0166] In one embodiment, the pharmaceutical composition is a parenteral dosage unit. In
one embodiment, the pharmaceutical composition is a subcutaneous, intramuscular, intravenous,
intradermal, intrathecal, or epidural dosage unit. In one embodiment, the pharmaceutical
composition is a subcutaneous, intramuscular, or intravenous dosage unit. In one embodiment,
the pharmaceutical composition is injectable.
[0167] The pharmaceutical compositions disclosed herein may be prepared by methodology well
known in the pharmaceutical art. For example, a pharmaceutical composition intended
to be administered by injection can be prepared by combining a compound of the embodiments
disclosed herein with sterile, distilled water so as to form a solution. A surfactant
may be added to facilitate the formation of a homogeneous solution or suspension.
Surfactants are compounds that non-covalently interact with the compound of the embodiments
disclosed herein so as to facilitate dissolution or homogeneous suspension of the
compound in the aqueous delivery system.
[0168] The compounds of the embodiments disclosed herein, or their pharmaceutically acceptable
salts, are administered in a therapeutically effective amount, which will vary depending
upon a variety of factors including the activity of the specific compound employed;
the metabolic stability and length of action of the compound; the age, body weight,
general health, sex, and diet of the patient; the mode and time of administration;
the rate of excretion; the drug combination; the severity of the particular disorder
or condition; and the subject undergoing therapy.
Combination Therapy
[0169] In certain embodiments, a method for treating an HIV infection in a human having
or at risk of having the infection is provided, comprising administering to the human
a therapeutically effective amount of a compound disclosed herein, or a pharmaceutically
acceptable salt thereof, in combination with a therapeutically effective amount of
one, two, three, or four additional therapeutic agents. In one embodiment, a method
for treating an HIV infection in a human having or at risk of having the infection
is provided, comprising administering to the human a therapeutically effective amount
of a compound disclosed herein, or a pharmaceutically acceptable salt thereof, in
combination with a therapeutically effective amount of one, two, three, or four additional
therapeutic agents.
[0170] In one embodiment, pharmaceutical compositions comprising a compound disclosed herein,
or a pharmaceutically acceptable salt thereof, in combination with one, two, three,
or four additional therapeutic agents, and a pharmaceutically acceptable carrier,
diluent, or excipient are provided.
[0171] In certain embodiments, the present disclosure provides a method for treating an
HIV infection, comprising administering to a patient in need thereof a therapeutically
effective amount of a compound disclosed herein, or a pharmaceutically acceptable
salt thereof, in combination with a therapeutically effective amount of one, two,
three, or four additional therapeutic agents which are suitable for treating an HIV
infection.
[0172] In certain embodiments, a compound disclosed herein, or a pharmaceutically acceptable
salt thereof, is combined with one, two, three, four, or more additional therapeutic
agents. In certain embodiments, a compound disclosed herein, or a pharmaceutically
acceptable salt thereof, is combined with two additional therapeutic agents. In other
embodiments, a compound disclosed herein, or a pharmaceutically acceptable salt thereof,
is combined with three additional therapeutic agents. In further embodiments, a compound
disclosed herein, or a pharmaceutically acceptable salt thereof, is combined with
four additional therapeutic agents. The one, two, three, four, or more additional
therapeutic agents can be different therapeutic agents selected from the same class
of therapeutic agents, and/or they can be selected from different classes of therapeutic
agents.
Administration of HIV Combination Therapy
[0173] In certain embodiments, a compound disclosed herein is administered with one, two,
three, or four additional therapeutic agents. Co-administration of a compound disclosed
herein with one, two, three, or four additional therapeutic agents generally refers
to simultaneous or sequential administration of a compound disclosed herein and one,
two, three, or four additional therapeutic agents, such that therapeutically effective
amounts of the compound disclosed herein and the one, two, three, or four additional
therapeutic agents are both present in the body of the patient. When administered
sequentially, the combination may be administered in two or more administrations.
[0174] Co-administration includes administration of unit dosages of the compounds disclosed
herein before or after administration of unit dosages of one, two, three, or four
additional therapeutic agents. For example, the compound disclosed herein may be administered
within seconds, minutes, or hours of the administration of the one, two, three, or
four additional therapeutic agents. In some embodiments, a unit dose of a compound
disclosed herein is administered first, followed within seconds or minutes by administration
of a unit dose of one, two, three, or four additional therapeutic agents. Alternatively,
a unit dose of one, two, three, or four additional therapeutic agents is administered
first, followed by administration of a unit dose of a compound disclosed herein within
seconds or minutes. In other embodiments, a unit dose of a compound disclosed herein
is administered first, followed, after a period of hours
(e.g., 1-12 hours), by administration of a unit dose of one, two, three, or four additional
therapeutic agents. In yet other embodiments, a unit dose of one, two, three, or four
additional therapeutic agents is administered first, followed, after a period of hours
(e.g., 1-12 hours), by administration of a unit dose of a compound disclosed herein.
[0175] In certain embodiments, a compound disclosed herein is combined with one, two, three,
or four additional therapeutic agents in a unitary dosage form for simultaneous administration
to a patient, for example as a solid dosage form for oral administration.
[0176] In certain embodiments, a kit comprising a compound disclosed herein
(e.g., a compound of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa, VIIb, VIII, IX, IXa, IXb, X, Xa, Xb, XI,
XIa, or
XIb,), or a pharmaceutically acceptable salt thereof, in combination with one or more
(e.g., one, two, three, or four) additional therapeutic agents is provided.
[0177] In certain embodiments, a compound of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI,
VIIa,
VIIb, VIII, IX, IXa, IXb, X, Xa, Xb, XI, XIa, or
XIb, is formulated as a tablet, which may optionally contain one or more other compounds
useful for treating HIV. In certain embodiments, the tablet can contain another active
ingredient for treating HIV, such as HIV protease inhibitors, HIV non-nucleoside or
non-nucleotide inhibitors of reverse transcriptase, HIV nucleoside or nucleotide inhibitors
of reverse transcriptase, HIV integrase inhibitors, HIV non-catalytic site (or allosteric)
integrase inhibitors, pharmacokinetic enhancers, and combinations thereof.
[0178] In certain embodiments, such tablets are suitable for once daily dosing.
HIV Combination Therapy
[0179] In the above embodiments, the additional therapeutic agent or agents may be an anti-HIV
agent, selected from HIV protease inhibitors, HIV non-nucleoside or non-nucleotide
inhibitors of reverse transcriptase, HIV nucleoside or nucleotide inhibitors of reverse
transcriptase, HIV integrase inhibitors, HIV non-catalytic site (or allosteric) integrase
inhibitors, HIV entry inhibitors, HIV maturation inhibitors, immunomodulators, immunotherapeutic
agents, antibody-drug conjugates, gene modifiers, gene editors (such as CRISPR/Cas9,
zinc finger nucleases, homing nucleases, synthetic nucleases, TALENs), cell therapies
(such as chimeric antigen receptor T-cell, CAR-T, and engineered T cell receptors,
TCR-T, autologous T cell therapies), latency reversing agents, compounds that target
the HIV capsid, capsid polymerization inhibitors, HIV bNAbs, immune-based therapies,
phosphatidylinositol 3-kinase (PI3K) inhibitors, HIV antibodies, broadly neutralizing
HIV antibodies, bispecific antibodies and "antibody-like" therapeutic proteins, HIV
p17 matrix protein inhibitors, IL-13 antagonists, peptidyl-prolyl cis-trans isomerase
A modulators, protein disulfide isomerase inhibitors, complement C5a receptor antagonists,
DNA methyltransferase inhibitor, HIV vif gene modulators, Vif dimerization antagonists,
HIV viral infectivity factor inhibitors, TAT protein inhibitors, HIV Nef modulators,
Hck tyrosine kinase modulators, mixed lineage kinase-3 (MLK-3) inhibitors, HIV splicing
inhibitors, Rev protein inhibitors, integrin antagonists, nucleoprotein inhibitors,
splicing factor modulators, COMM domain containing protein 1 modulators, HIV ribonuclease
H inhibitors, retrocyclin modulators, CDK-9 inhibitors, dendritic ICAM-3 grabbing
nonintegrin 1 inhibitors, HIV GAG protein inhibitors, HIV POL protein inhibitors,
Complement Factor H modulators, ubiquitin ligase inhibitors, deoxycytidine kinase
inhibitors, cyclin dependent kinase inhibitors, proprotein convertase PC9 stimulators,
ATP dependent RNA helicase DDX3X inhibitors, reverse transcriptase priming complex
inhibitors, G6PD and NADH-oxidase inhibitors, pharmacokinetic enhancers, HIV gene
therapy, HIV vaccines, and combinations thereof.
[0180] In some embodiments, the additional therapeutic agent or agents are selected from
combination drugs for HIV, other drugs for treating HIV, HIV protease inhibitors,
HIV reverse transcriptase inhibitors, HIV integrase inhibitors, HIV non-catalytic
site (or allosteric) integrase inhibitors, HIV entry (fusion) inhibitors, HIV maturation
inhibitors, latency reversing agents, capsid inhibitors, immune-based therapies, PI3K
inhibitors, HIV antibodies, and bispecific antibodies, and "antibody-like" therapeutic
proteins, and combinations thereof.
HIV Combination Drugs
[0181] Examples of combination drugs include ATRIPLA
® (efavirenz, tenofovir disoproxil fumarate, and emtricitabine); COMPLERA
® (EVIPLERA
®; rilpivirine, tenofovir disoproxil fumarate, and emtricitabine); STRIBILD
® (elvitegravir, cobicistat, tenofovir disoproxil fumarate, and emtricitabine); TRUVADA
® (tenofovir disoproxil fumarate and emtricitabine; TDF+FTC); DESCOVY
® (tenofovir alafenamide and emtricitabine); ODEFSEY
® (tenofovir alafenamide, emtricitabine, and rilpivirine); GENVOYA
® (tenofovir alafenamide, emtricitabine, cobicistat, and elvitegravir); SYMTUZA
® (darunavir, tenofovir alafenamide, emtricitabine, and cobicistat); BIKTARVY
® (bictegravir, tenofovir alafenamide, and emtricitabine); bictegravir, tenofovir disoproxil
and emtricitabine; bictegravir, tenofovir alafenamide and lamivudine; bictegravir,
tenofovir disoproxil and lamivudine; bictegravir, abacavir and lamivudine; efavirenz,
lamivudine, and tenofovir disoproxil fumarate; lamivudine and tenofovir disoproxil
fumarate; tenofovir and lamivudine; tenofovir alafenamide and emtricitabine; tenofovir
alafenamide hemifumarate and emtricitabine; tenofovir alafenamide hemifumarate, emtricitabine,
and rilpivirine; tenofovir alafenamide hemifumarate, emtricitabine, cobicistat, and
elvitegravir; COMBIVIR
® (zidovudine and lamivudine; AZT+3TC); EPZICOM
® (LIVEXA
®; abacavir sulfate and lamivudine; ABC+3TC); KALETRA
® (ALUVIA
®; lopinavir and ritonavir); TRIUMEQ
® (dolutegravir, abacavir, and lamivudine); JULUCA
® (dolutegravir, ripilvirine); TRIZIVIR
® (abacavir sulfate, zidovudine, and lamivudine; ABC+AZT+3TC); dolutegravir and lamivudine;
dolutegravir and abacavir; cabotegravir and lamivudine; cabotegravir and abacavir;
cabotegravir and rilpivirine; atazanavir and cobicistat; atazanavir sulfate and cobicistat;
atazanavir sulfate and ritonavir; darunavir and cobicistat; dolutegravir and rilpivirine;
dolutegravir and rilpivirine hydrochloride; dolutegravir, abacavir sulfate, and lamivudine;
lamivudine, nevirapine, and zidovudine; raltegravir and lamivudine; doravirine, lamivudine,
and tenofovir disoproxil fumarate; doravirine, lamivudine, and tenofovir disoproxil;
dolutegravir + lamivudine; lamivudine + abacavir + zidovudine; lamivudine + abacavir;
lamivudine + tenofovir disoproxil fumarate; lamivudine + zidovudine + nevirapine;
lopinavir + ritonavir; lopinavir + ritonavir + abacavir + lamivudine; lopinavir +
ritonavir + zidovudine + lamivudine; tenofovir + lamivudine; and tenofovir disoproxil
fumarate + emtricitabine + rilpivirine hydrochloride.
Other HIV Drugs
[0182] Examples of other drugs for treating HIV include acemannan, alisporivir, BanLec,
deferiprone, Gamimune, metenkefalin, naltrexone, Prolastin, REP 9, RPI-MN, VSSP, H1viral,
SB-728-T, 1,5-dicaffeoylquinic acid, rHIV7-shl-TAR-CCR5RZ, MazF gene therapy, BlockAide,
ABX-464, AG-1105, APH-0812, BIT-225, CYT-107, HGTV-43, HPH-116, HS-10234, IMO-3100,
IND-02, MK-1376, MK-2048, MK-4250, MK-8507, MK-8591, NOV-205, PA-1050040 (PA-040),
PGN-007, SCY-635, SB-9200, SCB-719, TR-452, TEV-90110, TEV-90112, TEV-90111, TEV-90113,
RN-18, Immuglo, and VIR-576.
HIV Protease Inhibitors
[0183] Examples of HIV protease inhibitors include amprenavir, atazanavir, brecanavir, darunavir,
fosamprenavir, fosamprenavir calcium, indinavir, indinavir sulfate, lopinavir, nelfinavir,
nelfinavir mesylate, ritonavir, saquinavir, saquinavir mesylate, tipranavir, DG-17,
TMB-657 (PPL-100), T-169, BL-008, MK-8122, TMB-607, and TMC-310911.
HIV Reverse Transcriptase Inhibitors
[0184] Examples of HIV non-nucleoside or non-nucleotide inhibitors of reverse transcriptase
include dapivirine, delavirdine, delavirdine mesylate, doravirine, efavirenz, etravirine,
lentinan, nevirapine, rilpivirine, ACC-007, AIC-292, KM-023, PC-1005, and elsulfavirine
(VM-1500).
[0185] Examples of HIV nucleoside or nucleotide inhibitors of reverse transcriptase include
adefovir, adefovir dipivoxil, azvudine, emtricitabine, tenofovir, tenofovir alafenamide,
tenofovir alafenamide fumarate, tenofovir alafenamide hemifumarate, tenofovir disoproxil,
tenofovir disoproxil fumarate, tenofovir disoproxil hemifumarate, VIDEX
® and VIDEX EC
® (didanosine, ddl), abacavir, abacavir sulfate, alovudine, apricitabine, censavudine,
didanosine, elvucitabine, festinavir, fosalvudine tidoxil, CMX-157, dapivirine, doravirine,
etravirine, OCR-5753, tenofovir disoproxil orotate, fozivudine tidoxil, lamivudine,
phosphazid, stavudine, zalcitabine, zidovudine, rovafovir etalafenamide (GS-9131),
GS-9148, MK-8504, MK-8591, MK-858, VM-2500 and KP-1461.
HIV Integrase Inhibitors
[0186] Examples of HIV integrase inhibitors include elvitegravir, curcumin, derivatives
of curcumin, chicoric acid, derivatives of chicoric acid, 3,5-dicaffeoylquinic acid,
derivatives of 3,5-dicaffeoylquinic acid, aurintricarboxylic acid, derivatives of
aurintricarboxylic acid, caffeic acid phenethyl ester, derivatives of caffeic acid
phenethyl ester, tyrphostin, derivatives of tyrphostin, quercetin, derivatives of
quercetin, raltegravir, dolutegravir, JTK-351, bictegravir, AVX-15567, diketo quinolin-4-1
derivatives, integrase-LEDGF inhibitor, ledgins, M-522, M-532, NSC-310217, NSC-371056,
NSC-48240, NSC-642710, NSC-699171, NSC-699172, NSC-699173, NSC-699174, stilbenedisulfonic
acid, T-169, VM-3500 and cabotegravir.
[0187] Examples of HIV non-catalytic site, or allosteric, integrase inhibitors (NCINI) include
CX-05045, CX-05168, and CX-14442.
HIV Entry Inhibitors
[0188] Examples of HIV entry (fusion) inhibitors include cenicriviroc, CCR5 inhibitors,
gp41 inhibitors, CD4 attachment inhibitors, gp120 inhibitors, and CXCR4 inhibitors.
[0189] Examples of CCR5 inhibitors include aplaviroc, vicriviroc, maraviroc, cenicriviroc,
leronlimab (PRO-140), adaptavir (RAP-101), nifeviroc (TD-0232), anti-GP120/CD4 or
CCR5 bispecific antibodies, B-07, MB-66, polypeptide C25P, TD-0680, and vMIP (Haimipu).
[0190] Examples of gp41 inhibitors include albuvirtide, enfuvirtide, BMS-986197, enfuvirtide
biobetter, enfuvirtide biosimilar, HIV fusion inhibitors (P26-Bapc), ITV-1, ITV-2,
ITV-3, ITV-4, PIE-12 trimer and sifuvirtide.
[0191] Examples of CD4 attachment inhibitors include ibalizumab and CADA analogs.
[0192] Examples of gp120 inhibitors include Radha-108 (receptol) 3B3-PE38, BanLec, bentonite-based
nanomedicine, fostemsavir tromethamine, IQP-0831, and BMS-663068.
[0193] Examples of CXCR4 inhibitors include plerixafor, ALT-1188, N15 peptide, and vMIP
(Haimipu).
HIV Maturation Inhibitors
[0194] Examples of HIV maturation inhibitors include BMS-955176, GSK-3640254 and GSK-2838232.
Latency Reversing Agents
[0195] Examples of latency reversing agents include histone deacetylase (HDAC) inhibitors,
proteasome inhibitors such as velcade, protein kinase C (PKC) activators, Smyd2 inhibitors,
BET-bromodomain 4 (BRD4) inhibitors, ionomycin, PMA, SAHA (suberanilohydroxamic acid,
or suberoyl, anilide, and hydroxamic acid), IL-15 modulating antibodies, JQ1, disulfiram,
amphotericin B, and ubiquitin inhibitors such as largazole analogs, APH-0812, GSK-343,
and toll-like receptor modulators.
[0196] Examples of HDAC inhibitors include romidepsin, vorinostat, and panobinostat.
[0197] Examples of PKC activators include indolactam, prostratin, ingenol B, and DAG-lactones.
Capsid Inhibitors
[0198] Examples of capsid inhibitors include capsid polymerization inhibitors or capsid
disrupting compounds, HIV nucleocapsid p7 (NCp7) inhibitors such as azodicarbonamide,
HIV p24 capsid protein inhibitors, GS-6207, AVI-621, AVI-101, AVI-201, AVI-301, and
AVI-CAN1-15 series.
Immune-based Therapies
[0199] Examples of immune-based therapies include toll-like receptors modulators such as
TLR1, TLR2, TLR3, TLR4, TLR5, TLR6, TLR7, TLR8, TLR9, TLR10, TLR11, TLR12, and TLR13;
programmed cell death protein 1 (Pd-1) modulators; programmed death-ligand 1 (PDL-1)
modulators; IL-15 modulators; DermaVir; interleukin-7; plaquenil (hydroxychloroquine);
proleukin (aldesleukin, IL-2); interferon alfa; interferon alfa-2b; interferon alfa-n3;
pegylated interferon alfa; interferon gamma; hydroxyurea; mycophenolate mofetil (MPA)
and its ester derivative mycophenolate mofetil (MMF); ribavirin; polymer polyethyleneimine
(PEI); gepon; IL-12; WF-10; VGV-1; MOR-22; BMS-936559; CYT-107, interleukin-15/Fc
fusion protein, AM-0015, ALT-803, NIZ-985, NKTR-255, normferon, peginterferon alfa-2a,
peginterferon alfa-2b, recombinant interleukin-15, RPI-MN, , STING modulators, RIG-I
modulators, NOD2 modulators, SB-9200, and IR-103.
[0200] Examples of TLR agonists include vesatolimod (GS-9620), lefitolimod, tilsotolimod,
rintatolimod, DSP-0509, AL-034, G-100, cobitolimod, AST-008, motolimod, GSK-1795091,
GSK-2245035, VTX-1463, GS-9688, LHC-165, BDB-001, RG-7854, and telratolimod.
Phosphatidylinositol 3-kinase (PI3K) Inhibitors
[0201] Examples of PI3K inhibitors include idelalisib, alpelisib, buparlisib, CAI orotate,
copanlisib, duvelisib, gedatolisib, neratinib, panulisib, perifosine, pictilisib,
pilaralisib, puquitinib mesylate, rigosertib, rigosertib sodium, sonolisib, taselisib,
AMG-319, AZD-8186, BAY-1082439, CLR-1401, CLR-457, CUDC-907, DS-7423, EN-3342, GSK-2126458,
GSK-2269577, GSK-2636771, INCB-040093, LY-3023414, MLN-1117, PQR-309, RG-7666, RP-6530,
RV-1729, SAR-245409, SAR-260301, SF-1126, TGR-1202, UCB-5857, VS-5584, XL-765, and
ZSTK-474.
alpha-4/beta-7 Antagonists
[0202] Examples of Integrin alpha-4/beta-7 antagonists include PTG-100, TRK-170, abrilumab,
etrolizumab, carotegrast methyl, and vedolizumab.
HIV Antibodies, Bispecific Antibodies, and "Antibody-like" Therapeutic Proteins
[0203] Examples of HIV antibodies, bispecific antibodies, and "antibody-like" therapeutic
proteins include DARTs
®, DUOBODIES
®, BITES
®, XmAbs
®, TandAbs
®, Fab derivatives, bispecific antibodies, trispecific antibodies, multivalent antibodies,
bNAbs (broadly neutralizing HIV antibodies), BMS-936559, TMB-360, and those targeting
HIV gp120 or gp41, antibody-recruiting Molecules targeting HIV, anti-CD63 monoclonal
antibodies, CD3 bispecific antibodies, CD16 bispecific antibodies, anti-GB virus C
antibodies, anti-GP120/CD4, CCR5 bispecific antibodies, anti-Nef single domain antibodies,
anti-Rev antibody, camelid derived anti-CD18 antibodies, camelid-derived anti-ICAM-1
antibodies, DCVax-001, gp140 targeted antibodies, gp41-based HIV therapeutic antibodies,
human recombinant mAbs (PGT-121), ibalizumab, Immuglo, and MB-66.
[0204] Examples of those targeting HIV in such a manner include bavituximab, UB-421, C2F5,
2G12, C4E10, C2F5+C2G12+C4E10, 8ANC195, 3BNC117, 3BNC117-LS, 3BNC60, 10-1074, 10-1074-LS,
GS-9722, DH411-2, PGT145, PGT121, PGT-151, PGT-133, MDX010 (ipilimumab), DH511, N6,
N6LS, N49P6, N49P7, N49P9, N49P11, VRC01 VRC-01-LS, PGDM1400, A32, 7B2, 10E8, 10E8VLS,
3810109, 10E8v4, CAP256-VRC26.25, DRVIA7, SAR-441236, VRC-07-523, VRC07-523LS, VRC-HIVMAB080-00-AB,
VRC-HIVMAB060-00-AB, P2G12, and VRC07. Examples of HIV bispecific antibodies include
MGD014, and TMB-bispecific.
[0205] Example of
in vivo delivered bNAbs such as AAV8-VRC07; mRNA encoding anti-HIV antibody VRC01.
Pharmacokinetic Enhancers
[0206] Examples of pharmacokinetic enhancers include cobicistat and ritonavir.
Additional Therapeutic Agents
[0207] Examples of additional therapeutic agents include the compounds disclosed in
WO 2004/096286 (Gilead Sciences),
WO 2006/015261 (Gilead Sciences),
WO 2006/110157 (Gilead Sciences),
WO 2012/003497 (Gilead Sciences),
WO 2012/003498 (Gilead Sciences),
WO 2012/145728 (Gilead Sciences),
WO 2013/006738 (Gilead Sciences),
WO 2013/159064 (Gilead Sciences),
WO 2014/100323 (Gilead Sciences),
US 2013/0165489 (University of Pennsylvania),
US 2014/0221378 (Japan Tobacco),
US 2014/0221380 (Japan Tobacco),
WO 2009/062285 (Boehringer Ingelheim),
WO 2010/130034 (Boehringer Ingelheim),
WO 2013/006792 (Pharma Resources),
US 20140221356 (Gilead Sciences),
US 20100143301 (Gilead Sciences),
WO 2013/091096 (Boehringer Ingelheim),
WO 2018/145021 (Gilead Sciences), and
WO2017/106346 (Gilead Sciences), each of which is herein incorporated by reference in its entirety.
HIV Vaccines
[0208] Examples of HIV vaccines include peptide vaccines, recombinant subunit protein vaccines,
live vector vaccines, DNA vaccines, CD4-derived peptide vaccines, vaccine combinations,
rgp120 (AIDSVAX), ALVAC HIV (vCP1521)/AIDSVAX B/E (gp120) (RV144), monomeric gp120
HIV subtype C vaccine, Remune, ITV-1, Contre Vir, Ad5-ENVA-48, DCVax-001 (CDX-2401),
Vacc-4x, Vacc-C5, VAC-3S, multiclade DNA recombinant adenovirus-5 (rAd5), rAd5 gag-pol
env A/B/C vaccine, Pennvax-G, Pennvax-G/MVA-CMDR, HIV-TriMix-mRNA vaccine, HIV-LAMP-vax,
Ad35, Ad35-GRIN, NAcGM3/VSSP ISA-51, poly-ICLC adjuvanted vaccines, TatImmune, GTU-multiHIV
(FIT-06), gp140[delta]V2.TV1+MF-59, rVSVIN HIV gag vaccine, SeV-Gag vaccine, AT-20,
DNK-4, ad35-Grin/ENV, TBC-M4, HIVAX, HIVAX-2, NYVAC-HIV-PT1, NYVAC-HIV-PT4, DNA-HIV-PT123,
rAAV1-PG9DP, GOVX-B11, GOVX-B21, TVI-HIV, Ad-4 (Ad4-env Clade C+Ad4-mGag), Paxvax,
EN41-UGR7C, EN41-FPA2, PreVaxTat, AE-H, MYM-V101, CombiHIVvac, ADVAX, MYM-V201, MVA-CMDR,
DNA-Ad5 gag/pol/nef/nev (HVTN505), MVATG-17401, ETV-01, CDX-1401, rcAD26.MOS1.HIV-Env,
Ad26.Mod.HIV vaccine, Ad26.Mod.HIV + MVA mosaic vaccine + gp140, AGS-004, AVX-101,
AVX-201, PEP-6409, SAV-001, ThV-01, TL-01, TUTI-16, VGX-3300, IHV-001, and virus-like
particle vaccines such as pseudovirion vaccine, CombiVICHvac, LFn-p24 B/C fusion vaccine,
GTU-based DNA vaccine, HIV gag/pol/nef/env DNA vaccine, anti-TAT HIV vaccine, conjugate
polypeptides vaccine, dendritic-cell vaccines, gag-based DNA vaccine, GI-2010, gp41
HIV vaccine, HIV vaccine (PIKA adjuvant), I i-key/MHC class II epitope hybrid peptide
vaccines, ITV-2, ITV-3, ITV-4, LIPO-5, multiclade Env vaccine, MVA vaccine, Pennvax-GP,
pp71-deficient HCMV vector HIV gag vaccine, recombinant peptide vaccine (HIV infection),
NCI, rgp160 HIV vaccine, RNActive HIV vaccine, SCB-703, Tat Oyi vaccine, TBC-M4, therapeutic
HIV vaccine, UBI HIV gp120, Vacc-4x + romidepsin, variant gp120 polypeptide vaccine,
rAd5 gag-pol env A/B/C vaccine, DNA.HTI and MVA.HTI, VRC-HIVDNA016-00-VP + VRC-HIVADV014-00-VP,
INO-6145, JNJ-9220, gp14S C.6980; eOD-GT8 60mer based vaccine, PD-201401, env (A,
B, C, A/E)/gag (C) DNA Vaccine, gp120 (A,B,C,A/E) protein vaccine, PDPHV-201401, Ad4-EnvCN54,
EnvSeq-1 Envs HIV vaccine (GLA-SE adjuvanted), HIV p24gag pri, me-boost plasmid DNA
vaccine, arenavirus vector-based immunotherapies (Vaxwave, TheraT), MVA-BN HIV vaccine
regimen, UBI HIV gp120, mRNA based prophylactic vaccines, and TBL-1203HI,
HIV Combination Therapy
[0209] In a particular embodiment, a compound disclosed herein, or a pharmaceutically acceptable
salt thereof, is combined with one, two, three, four or more additional therapeutic
agents selected from ATRIPLA
® (efavirenz, tenofovir disoproxil fumarate, and emtricitabine); COMPLERA
® (EVIPLERA
®; rilpivirine, tenofovir disoproxil fumarate, and emtricitabine); STRIBILD
® (elvitegravir, cobicistat, tenofovir disoproxil fumarate, and emtricitabine); TRUVADA
® (tenofovir disoproxil fumarate and emtricitabine; TDF +FTC); DESCOVY
® (tenofovir alafenamide and emtricitabine); ODEFSEY
® (tenofovir alafenamide, emtricitabine, and rilpivirine); GENVOYA
® (tenofovir alafenamide, emtricitabine, cobicistat, and elvitegravir); adefovir; adefovir
dipivoxil; cobicistat; emtricitabine; tenofovir; tenofovir disoproxil; tenofovir disoproxil
fumarate; tenofovir alafenamide; tenofovir alafenamide hemifumarate; TRIUMEQ
® (dolutegravir, abacavir, and lamivudine); dolutegravir, abacavir sulfate, and lamivudine;
raltegravir; raltegravir and lamivudine; maraviroc; enfuvirtide; ALUVIA
® (KALETRA
®; lopinavir and ritonavir); COMBIVIR
® (zidovudine and lamivudine; AZT+3TC); EPZICOM
® (LIVEXA
®; abacavir sulfate and lamivudine; ABC+3TC); TRIZIVIR
® (abacavir sulfate, zidovudine, and lamivudine; ABC+AZT+3TC); rilpivirine; rilpivirine
hydrochloride; atazanavir sulfate and cobicistat; atazanavir and cobicistat; darunavir
and cobicistat; atazanavir; atazanavir sulfate; dolutegravir; elvitegravir; ritonavir;
atazanavir sulfate and ritonavir; darunavir; lamivudine; prolastin; fosamprenavir;
fosamprenavir calcium efavirenz; etravirine; nelfinavir; nelfinavir mesylate; interferon;
didanosine; stavudine; indinavir; indinavir sulfate; tenofovir and lamivudine; zidovudine;
nevirapine; saquinavir; saquinavir mesylate; aldesleukin; zalcitabine; tipranavir;
amprenavir; delavirdine; delavirdine mesylate; Radha-108 (receptol); lamivudine and
tenofovir disoproxil fumarate; efavirenz, lamivudine, and tenofovir disoproxil fumarate;
phosphazid; lamivudine, nevirapine, and zidovudine; abacavir; and abacavir sulfate.
[0210] It will be appreciated by one of skill in the art that the additional therapeutic
agents listed above may be included in more than one of the classes listed above.
The particular classes are not intended to limit the functionality of those compounds
listed in those classes.
[0211] In a specific embodiment, a compound disclosed herein, or a pharmaceutically acceptable
salt thereof, is combined with an HIV nucleoside or nucleotide inhibitor of reverse
transcriptase. In a specific embodiment, a compound disclosed herein, or a pharmaceutically
acceptable salt thereof, is combined with an HIV nucleoside or nucleotide inhibitor
of reverse transcriptase and an HIV non-nucleoside inhibitor of reverse transcriptase.
In another specific embodiment, a compound disclosed herein, or a pharmaceutically
acceptable salt thereof, is combined with an HIV nucleoside or nucleotide inhibitor
of reverse transcriptase, and an HIV protease inhibiting compound. In an additional
embodiment, a compound disclosed herein, or a pharmaceutically acceptable salt thereof,
is combined with an HIV nucleoside or nucleotide inhibitor of reverse transcriptase,
an HIV non-nucleoside inhibitor of reverse transcriptase, and a pharmacokinetic enhancer.
In certain embodiments, a compound disclosed herein, or a pharmaceutically acceptable
salt thereof, is combined with at least one HIV nucleoside inhibitor of reverse transcriptase,
an integrase inhibitor, and a pharmacokinetic enhancer. In another embodiment, a compound
disclosed herein, or a pharmaceutically acceptable salt thereof, is combined with
two HIV nucleoside or nucleotide inhibitors of reverse transcriptase. In a specific
embodiment, a compound disclosed herein, or a pharmaceutically acceptable salt thereof,
is combined with an HIV nucleoside or nucleotide inhibitor of reverse transcriptase
and an HIV capsid inhibitor or an HIV capsid polymerization inhibitor. In a specific
embodiment, a compound disclosed herein, or a pharmaceutically acceptable salt thereof,
is combined with an HIV capsid inhibitor or an HIV capsid polymerization inhibitor.
In a specific embodiment, a compound disclosed herein, or a pharmaceutically acceptable
salt thereof, is combined with one, two, three or four HIV bNAbs. In a specific embodiment,
a compound disclosed herein, or a pharmaceutically acceptable salt thereof, is combined
with one, two, three or four HIV bNAbs and a HIV capsid inhibitor or an HIV capsid
polymerization inhibitor. In a specific embodiment, a compound disclosed herein, or
a pharmaceutically acceptable salt thereof, is combined with one, two, three or four
HIV bNAbs, an HIV capsid inhibitor or an HIV capsid polymerization inhibitor, and
an HIV nucleoside or nucleotide inhibitor of reverse transcriptase.
[0212] A compound as disclosed herein (
e.
g., any compound of formula I) may be combined with one, two, three, or four additional
therapeutic agents in any dosage amount of the compound of formula I
(e.g., from 1 mg to 500 mg of compound).
[0213] In one embodiment, kits comprising a compound disclosed herein, or a pharmaceutically
acceptable salt thereof, in combination with one or more
(e.g., one, two, three, one or two, or one to three) additional therapeutic agents are provided.
[0214] In one embodiment, the additional therapeutic agent or agents of the kit is an anti-HIV
agent, selected from HIV protease inhibitors, HIV non-nucleoside or non-nucleotide
inhibitors of reverse transcriptase, HIV nucleoside or nucleotide inhibitors of reverse
transcriptase, HIV integrase inhibitors, HIV non-catalytic site (or allosteric) integrase
inhibitors, HIV entry inhibitors, HIV maturation inhibitors, immunomodulators, immunotherapeutic
agents, antibody-drug conjugates, gene modifiers, gene editors (such as CRISPR/Cas9,
zinc finger nucleases, homing nucleases, synthetic nucleases, TALENs), cell therapies
(such as chimeric antigen receptor T-cell, CAR-T, and engineered T cell receptors,
TCR-T, autologous T cell therapies), compounds that target the HIV capsid, latency
reversing agents, capsid polymerization inhibitors, HIV bNAbs, immune-based therapies,
phosphatidylinositol 3-kinase (PI3K) inhibitors, HIV antibodies, broadly neutralizing
HIV antibodies, bispecific antibodies and "antibody-like" therapeutic proteins, HIV
p17 matrix protein inhibitors, IL-13 antagonists, peptidyl-prolyl cis-trans isomerase
A modulators, protein disulfide isomerase inhibitors, complement C5a receptor antagonists,
DNA methyltransferase inhibitor, HIV vif gene modulators, Vif dimerization antagonists,
HIV viral infectivity factor inhibitors, TAT protein inhibitors, HIV Nef modulators,
Hck tyrosine kinase modulators, mixed lineage kinase-3 (MLK-3) inhibitors, HIV splicing
inhibitors, Rev protein inhibitors, integrin antagonists, nucleoprotein inhibitors,
splicing factor modulators, COMM domain containing protein 1 modulators, HIV ribonuclease
H inhibitors, retrocyclin modulators, CDK-9 inhibitors, dendritic ICAM-3 grabbing
nonintegrin 1 inhibitors, HIV GAG protein inhibitors, HIV POL protein inhibitors,
Complement Factor H modulators, ubiquitin ligase inhibitors, deoxycytidine kinase
inhibitors, cyclin dependent kinase inhibitors, proprotein convertase PC9 stimulators,
ATP dependent RNA helicase DDX3X inhibitors, reverse transcriptase priming complex
inhibitors, G6PD and NADH-oxidase inhibitors, pharmacokinetic enhancers, HIV gene
therapy, HIV vaccines, and combinations thereof.
[0215] In some embodiments, the additional therapeutic agent or agents of the kit are selected
from combination drugs for HIV, other drugs for treating HIV, HIV protease inhibitors,
HIV reverse transcriptase inhibitors, HIV integrase inhibitors, HIV non-catalytic
site (or allosteric) integrase inhibitors, HIV entry (fusion) inhibitors, HIV maturation
inhibitors, latency reversing agents, capsid inhibitors, immune-based therapies, PI3K
inhibitors, HIV antibodies, and bispecific antibodies, and "antibody-like" therapeutic
proteins, and combinations thereof.
[0216] In a specific embodiment, the kit includes a compound disclosed herein, or a pharmaceutically
acceptable salt thereof, and an HIV nucleoside or nucleotide inhibitor of reverse
transcriptase. In a specific embodiment, the kit includes a compound disclosed herein,
or a pharmaceutically acceptable salt thereof, and an HIV nucleoside or nucleotide
inhibitor of reverse transcriptase and an HIV non-nucleoside inhibitor of reverse
transcriptase. In another specific embodiment, the kit includes a compound disclosed
herein, or a pharmaceutically acceptable salt thereof, and an HIV nucleoside or nucleotide
inhibitor of reverse transcriptase, and an HIV protease inhibiting compound. In an
additional embodiment, the kit includes a compound disclosed herein, or a pharmaceutically
acceptable salt thereof, an HIV nucleoside or nucleotide inhibitor of reverse transcriptase,
an HIV non-nucleoside inhibitor of reverse transcriptase, and a pharmacokinetic enhancer.
In certain embodiments, the kit includes a compound disclosed herein, or a pharmaceutically
acceptable salt thereof, at least one HIV nucleoside inhibitor of reverse transcriptase,
an integrase inhibitor, and a pharmacokinetic enhancer. In another embodiment, the
kit includes a compound disclosed herein, or a pharmaceutically acceptable salt thereof,
and two HIV nucleoside or nucleotide inhibitors of reverse transcriptase. In a specific
embodiment, the kit includes a compound disclosed herein, or a pharmaceutically acceptable
salt thereof, an HIV nucleoside or nucleotide inhibitor of reverse transcriptase and
an HIV capsid inhibitor or an HIV capsid polymerization inhibitor. In a specific embodiment,
the kit includes a compound disclosed herein, or a pharmaceutically acceptable salt
thereof, and an HIV capsid inhibitor or an HIV capsid polymerization inhibitor. In
a specific embodiment, the kit includes a compound disclosed herein, or a pharmaceutically
acceptable salt thereof, and one, two, three or four HIV bNAbs. In a specific embodiment,
the kit includes a compound disclosed herein, or a pharmaceutically acceptable salt
thereof, one, two, three or four HIV bNAbs and a HIV capsid inhibitor or an HIV capsid
polymerization inhibitor. In a specific embodiment, the kit includes a compound disclosed
herein, or a pharmaceutically acceptable salt thereof, one, two, three or four HIV
bNAbs, an HIV capsid inhibitor or an HIV capsid polymerization inhibitor, and an HIV
nucleoside or nucleotide inhibitor of reverse transcriptase.
Birth control (contraceptive) combination therapy
[0217] Therapeutic agents used for birth control (contraceptive) include cyproterone acetate,
desogestrel, dienogest, drospirenone, estradiol valerate, ethinyl estradiol, ethynodiol,
etonogestrel, levomefolate, levonorgestrel, lynestrenol, medroxyprogesterone acetate,
mestranol, mifepristone, misoprostol, nomegestrol acetate, norelgestromin, norethindrone,
noretynodrel, norgestimate, ormeloxifene, segestersone acetate, ulipristal acetate,
and any combinations thereof.
Gene Therapy and Cell Therapy
[0218] Gene therapy and cell therapy includes the genetic modification to silence a gene;
genetic approaches to directly kill the infected cells; the infusion of immune cells
designed to replace most of the patient's own immune system to enhance the immune
response to infected cells, or activate the patient's own immune system to kill infected
cells, or find and kill the infected cells; and genetic approaches to modify cellular
activity to further alter endogenous immune responsiveness against the infection.
[0219] Examples of dendritic cell therapy include AGS-004.
[0220] Example of CCR5 gene editing drugs such as SB-728T
[0221] Example of CCR5 gene inhibitors such as Cal-1
[0222] C34-CCR5/C34-CXCR4 expressing CD4-positive T cells
[0223] AGT-103-transduced autologous T cell therapy
[0224] AAV-eCD4-Ig gene therapy
Gene Editors
[0225] The genome editing system is selected from the group consisting of: a CRISPR/Cas9
system, a zinc finger nuclease system, a TALEN system, a homing endonucleases system,
and a meganuclease system.
[0226] Examples of HIV targeting CRISPR/Cas9 systems include EBT-101.
CAR-T cell therapy
[0227] A population of immune effector cells engineered to express a chimeric antigen receptor
(CAR), wherein the CAR comprises an HIV antigen-binding domain. The HIV antigen include
an HIV envelope protein or a portion thereof, gp120 or a portion thereof, a CD4 binding
site on gp120, the CD4-induced binding site on gp120, N glycan on gp120, the V2 of
gp120, the membrane proximal region on gp41. The immune effector cell is a T cell
or an NK cell. In some embodiments, the T cell is a CD4+ T cell, a CD8+ T cell, or
a combination thereof. Cells can be autologous or allogeneic.
[0228] Examples of HIV CAR-T include VC-CAR-T, anti-CD4 CART cell therapy, autologous hematopoietic
stem cells genetically engineered to express a CD4 CAR and the C46 peptide.
TCR-T cell therapy
[0229] TCR-T cells are engineered to target HIV derived peptides present on the surface
of virus-infected cells.
HIV Long-Acting therapy
[0230] Examples of drugs that are being developed as long-acting regimens include cabotegravir,
rilpivirine, any integrase LA, VM-1500 LAI, maraviroc (LAI), tenofovir implant, MK-8591
implant, doravirine, raltegravir, and long-acting dolutegravir.
[0231] In certain embodiments, when a compound disclosed herein is combined with one, two,
three, or four additional therapeutic agents as described above, the components of
the composition are administered as a simultaneous or sequential regimen. When administered
sequentially, the combination may be administered in two or more administrations.
Routes of Administration
[0232] The compound of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa, VIIb, VIII, IX, IXa, IXb, X, Xa, Xb, XI,
XIa, or
XIb, or a pharmaceutically acceptable salt thereof, (also referred to herein as the active
ingredient) can be administered by any route appropriate to the condition to be treated.
Suitable routes include oral, rectal, nasal, topical (including buccal and sublingual),
transdermal, vaginal and parenteral (including subcutaneous, intramuscular, intravenous,
intradermal, intrathecal and epidural), and the like. It will be appreciated that
a suitable route may vary with, for example, the condition of the recipient. n certain
embodiments, the compounds disclosed can be dosed parenterally. In certain embodiments,
the compounds disclosed can be dosed intravenous, subcutaneous, or intramuscular.
In certain embodiments, the compounds disclosed are orally bioavailable and can be
dosed orally.
[0233] In some embodiments, the compound of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa,
VIIb, VIII, IX, IXa, IXb, X, Xa, Xb, XI,
XIa, or
XIb, or a pharmaceutically acceptable salt thereof, is administered with a syringe suitable
for administration of the compound. In some embodiments, the syringe is disposable.
In some embodiments, the syringe is reusable. In some embodiments, the syringe is
pre-filled with the compound of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa, VIIb, VIII, IX, IXa, IXb, X, Xa, Xb, XI,
XIa, or
XIb, or a pharmaceutically acceptable salt thereof.
[0234] In some embodiments, the compound of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa,
VIIb, VIII, IX, IXa, IXb, X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, is administered with an auto-injector
comprising a syringe. In some embodiments, the syringe is disposable. In some embodiments,
the syringe is reusable. In some embodiments, the syringe is pre-filled with the compound
formula
I, II, IIIa, IIIb, IV, Va, Vb, VI,
VIIa,
VIIb, VIII, IX, IXa, IXb, X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof.
Dosing Regimen
[0235] In some embodiments, the compound, such as a compound of formula
I, II,
IIIa,
IIIb,
IV, Va, Vb, VI, VIIa, VIIb, VIII, IX, IXa, IXb, X, Xa, Xb, XI,
XIa, or
XIb, or a pharmaceutically acceptable salt thereof, is administered to a subject in accordance
with an effective dosing regimen for a desired period of time or duration, such as
at least about once a day, at least about once a week, at least about once a month,
at least about once every 2 months, at least about once every 3 months, at least about
once every 4 months, at least about once every 6 months, or at least about once every
12 months or longer. In some embodiments, the compound is administered on a daily
or intermittent schedule. In some embodiments, the compound is administered on a weekly
schedule. In some embodiments, the compound is administered on a monthly schedule.
In some embodiments, the compound is administered every two months. In some embodiments,
the compound is administered every three months. In some embodiments, the compound
is administered every four months. In some embodiments, the compound is administered
every five months. In some embodiments, the compound is administered every 6 months.
[0236] In some embodiments, the compound, such as a compound of formula
I, II,
IIIa,
IIIb,
IV, Va, Vb, VI, VIIa, VIIb, VIII, IX, IXa, IXb, X, Xa, Xb, XI,
XIa, or
XIb, or a pharmaceutically acceptable salt thereof, is subcutaneously or intramuscularly
administered to a subject at least about once a month. In some embodiments, the compound
(e.g., a compound of formula
I, II, IIIa, IIIb, IV, Va, Vb, VI, VIIa, VIIb, VIII, IX, IXa, IXb, X, Xa, Xb, XI,
XIa, or
XIb, or a pharmaceutically acceptable salt thereof), is subcutaneously or intramuscularly
administered to a subject at least about once every 2 months or at least about once
every 3 months, or at least about once every 4 months, or at least about once every
6 months. In some embodiments, the compound
(e.g., a compound of formula
I, II,
IIIa,
IIIb,
IV, Va, Vb, VI, VIIa,
VIIb, VIII, IX, IXa, IXb,
X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof), is subcutaneously administered to
a subject at least about once a month. In some embodiments, the compound
(e.g., a compound of formula
I, II,
IIIa,
IIIb,
IV, Va, Vb, VI, VIIa,
VIIb, VIII, IX, IXa, IXb,
X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof), is subcutaneously administered to
a subject at least about once every 2 months. In some embodiments, the compound
(e.g., a compound of formula
I, II,
IIIa,
IIIb,
IV, Va, Vb, VI, VIIa,
VIIb,
VIII, IX, IXa, IXb,
X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof), is subcutaneously administered to
a subject at least about once every 3 months.
[0237] In some embodiments, the dosage or dosing frequency of a compound of formula
I, II, IIIa,
IIIb,
IV, Va, Vb, VI, VIIa,
VIIb, VIII, IX, IXa, IXb,
X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, is adjusted over the course of the
treatment, based on the judgment of the administering physician.
[0238] In some embodiments, a compound as disclosed herein
(e.g., a compound of formula
I, II,
IIIa,
IIIb,
IV, Va, Vb, VI, VIIa,
VIIb, VIII, IX, IXa, IXb,
X, Xa, Xb XI, XIa, or
XIb) or a pharmaceutically acceptable salt thereof, may be administered in a dosage amount
that is effective. For example, the dosage amount can be from 1 mg to 1000 mg of compound.
[0239] In some embodiments, the methods disclosed herein comprise event-driven administration
of the compound of formula
I, II,
IIIa,
IIIb,
IV, Va, Vb, VI, VIIa,
VIIb, VIII, IX, IXa, IXb,
X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, to the subj ect.
[0240] As used herein, the terms "event-driven" and "event-driven administration" refer
to administration of the compound of formula
I, II,
IIIa,
IIIb,
IV, Va, Vb, VI, VIIa,
VIIb, VIII, IX, IXa, IXb,
X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, (1) prior to an event
(e.g., 2 hours, 1 day, 2 days, 5 day, or 7 or more days prior to the event) that would expose
the individual to HIV (or that would otherwise increase the individual's risk of acquiring
HIV); and/or (2) during an event (or more than one recurring event) that would expose
the individual to HIV (or that would otherwise increase the individual's risk of acquiring
HIV); and/or (3) after an event (or after the final event in a series of recurring
events) that would expose the individual to HIV (or that would otherwise increase
the individual's risk of acquiring HIV). In some embodiments, the event driven administration
is performed pre-exposure of the subject to the HIV. In some embodiments, the event
driven administration is performed post-exposure of the subject to the HIV. In some
embodiments, the event driven administration is performed pre-exposure of the subject
to the HIV and post-exposure of the subject to the HIV.
[0241] In some embodiments, the compound of formula
I, II,
IIIa,
IIIb,
IV, Va, Vb, VI, VIIa,
VIIb, VIII, IX, IXa, IXb,
X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, is administered before exposure of
the subject to the HIV.
[0242] An example of event driven dosing regimen includes administration of the compound
of formula
I, II,
IIIa,
IIIb,
IV, Va, Vb, VI, VIIa,
VIIb, VIII, IX, IXa, IXb,
X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, within 24 to 2 hours prior to HIV
exposure (
e.
g., first sexual activity with sex partner known to be HIV positive, including sexual
intercourse), followed by administration of the compound of formula
I, II,
IIIa,
IIIb,
IV, Va, Vb, VI, VIIa,
VIIb,
VIII, IX, IXa, IXb,
X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt, every 24 hours during the period of exposure
(
e.
g., sexual activity with sex partner known to be HIV positive), followed by a further
administration of the compound of formula
I, II,
IIIa,
IIIb,
IV, Va, Vb, VI, VIIa,
VIIb, VIII, IX, IXa, IXb,
X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, after the last exposure (
e.
g., sexual activity with sex partner known to be HIV positive), and one last administration
of the compound of formula
I, II,
IIIa,
IIIb,
IV, Va, Vb, VI, VIIa,
VIIb, VIII, IX, IXa, IXb,
X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, 24 hours later.
[0243] A further example of an event driven dosing regimen includes administration of the
compound of formula
I, II,
IIIa,
IIIb,
IV, Va, Vb, VI, VIIa,
VIIb, VIII, IX, IXa, IXb,
X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, within 24 hours before HIV exposure
(
e.
g., sexual activity with sex partner known to be HIV positive), then daily administration
during the period of exposure (
e.
g., sexual activity with sex partner known to be HIV positive, including the last sexual
intercourse), followed by a last administration approximately 24 hours later after
the last exposure (which may be an increased dose, such as a double dose).
[0244] In certain embodiments, e.g., when administered as PrEP, the compound of formula
I, II, IIIa,
IIIb,
IV, Va, Vb, VI, VIIa,
VIIb, VIII, IX, IXa, IXb,
X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, is administered daily. In certain
embodiments, e.g., when administered as event-driven PrEP, the compound of formula
I, II,
IIIa,
IIIb,
IV, Va, Vb, VI, VIIa,
VIIb,
VIII, IX, IXa, IXb,
X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, is administered 1 hour to 10 days,
1 hour to 7 days, 1 hour to 5 days, 1 to 72 hours, 1 to 48 hours, 1 to 24 hours, or
12 to 12 hours prior to an event that would increase the individual's risk of acquiring
HIV
(e.g., prior to sex or other exposure to the HIV virus). In some embodiments, the compound
of formula
I, II,
IIIa,
IIIb,
IV, Va, Vb, VI, VIIa,
VIIb,
VIII, IX, IXa, IXb,
X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, is administered within 10 days, 7
days, 5 days, 72 hours, 60 hours, 48 hours, 24 hours, 12 hours, 9 hours, 6 hours,
4 hours, 3 hours, 2 hours, or 1 hour prior to an event that would increase the individual's
risk of acquiring HIV
(e.g., prior to sex or other exposure to the HIV virus). In certain embodiments, when the
compound of formula
I, II,
IIIa,
IIIb,
IV, Va, Vb, VI, VIIa,
VIIb, VIII, IX, IXa, IXb,
X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, is administered prior to an event
(
e.
g., administered prior to the event) that would increase the individual's risk of acquiring
HIV, it is administered daily prior to the event (
e.g., sexual activity). In certain embodiments, when the compound of formula
I, II,
IIIa,
IIIb,
IV, Va, Vb, VI, VIIa,
VIIb,
VIII, IX, IXa, IXb,
X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, is administered prior to an event
that would increase the individual's risk of acquiring HIV, it is administered one
to three times prior to the event.
[0245] In some embodiments, e.g., when administered as part of a an event-driven PrEP regimen,
the compound of formula
I, II,
IIIa,
IIIb,
IV, Va, Vb, VI, VIIa,
VIIb, VIII, IX, IXa, IXb,
X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, is administered during the time of
HIV-exposure. In certain embodiments wherein the compound of formula
I, II,
IIIa,
IIIb,
IV, Va, Vb, VI, VIIa,
VIIb, VIII, IX, IXa, IXb,
X, Xa, Xb, XI, XIa, or
XIb, is administered before exposure, the compound of formula
I, II,
IIIa,
IIIb,
IV, Va, Vb, VI, VIIa,
VIIb, VIII, IX, IXa, IXb,
X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, is administered daily
(e.g., as a single dose) during the time of HIV-exposure (
e.g., during the time period of sexual activity with sex partner known to be HIV positive).
In some embodiments, the compound of formula
I, II,
IIIa,
IIIb,
IV, Va, Vb, VI, VIIa,
VIIb,
VIII, IX, IXa, IXb,
X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, is administered daily
(e.g., for 1 to 7 days) after final exposure to the HIV
(e.g., after a period of sexual activity with sex partner known to be HIV positive). In
some embodiments, the administration is continued for 1 or 2 days after final exposure
to HIV.
[0246] Additional examples of PrEP and/or PEP can be found, for example, at the clinical
trial summary titled "On Demand Antiretroviral Pre-exposure Prophylaxis for HIV Infection
in Men Who Have Sex With Men" (Clinical Trial # NCT01473472); the clinical trial summary
titled "Prevention of HIV in ÃŽle-de-France" (Clinical Trials # NCT03113123), and at
Molina, et al. N. Engl. J. Med. 2015, 353:2237-2246, the disclosure of each of which is incorporated herein by reference in its entirety.
[0247] In some embodiments, methods for reducing the risk of acquiring HIV
(e.g., HIV-1 and/or HIV-2) comprise administration of the compound of formula
I, II,
IIIa,
IIIb,
IV, Va, Vb, VI, VIIa,
VIIb,
VIII, IX, IXa, IXb,
X, Xa, Xb, XI, XIa, or
XIb, or a pharmaceutically acceptable salt thereof, in combination with safer sex practices.
In certain embodiments, methods for reducing the risk of acquiring HIV
(e.g., HIV-1 and/or HIV-2) comprise administration to an individual at risk of acquiring
HIV. Examples of individuals at high risk for acquiring HIV include, without limitation,
an individual who is at risk of sexual transmission of HIV.
[0248] In some embodiments, the reduction in risk of acquiring HIV is at least about 40%,
50%, 60%, 70%, 80%, 90%, or 95%. In some embodiments, the reduction in risk of acquiring
HIV is at least about 75%. In some embodiments, the reduction in risk of acquiring
HIV is about 80%, 85%, or 90%.
Formulation
[0249] Formulations suitable for parenteral administration include aqueous and non-aqueous
sterile injection solutions which may contain anti-oxidants, buffers, bacteriostats
and solutes which render the formulation isotonic with the blood of the intended recipient;
and aqueous and non-aqueous sterile suspensions which may include suspending agents
and thickening agents. In certain embodiments the suspension is a microsuspension.
In certain embodiments the suspension is a nanosuspension.
[0250] In some embodiments, formulations suitable for parenteral administration (
e.
g., intramuscular (IM) and subcutaneous (SC) administration) will include one or more
excipients. Excipients should be compatible with the other ingredients of the formulation
and physiologically innocuous to the recipient thereof. Examples of suitable excipients
are well known to the person skilled in the art of parenteral formulation and may
be found,
e.g., in
Handbook of Pharmaceutical Excipients (eds. Rowe, Sheskey & Quinn), 6th edition 2009.
[0251] In certain embodiments, the active ingredient (
e.
g., a compound of formula
I, II,
IIIa,
IIIb,
IV, Va, Vb, VI, VIIa,
VIIb, VIII, IX, IXa, IXb,
X, Xa, Xb XI, XIa, or
XIb) is present as a free acid.
[0252] In certain embodiments the pharmaceutical composition disclosed herein is a parenteral
formulation. In certain embodiments, the formulation is administered subcutaneously
to a subject in need thereof. In certain embodiments, the formulation is administered
intramuscularly to a subject in need thereof.
[0253] The amount of active ingredient that may be combined with the inactive ingredients
to produce a dosage form may vary depending upon the intended treatment subject and
the particular mode of administration. For example, in some embodiments, a dosage
form for oral administration to humans may contain approximately 1 to 1000 mg of active
material formulated with an appropriate and convenient amount of carrier material
(
e.
g., inactive ingredient or excipient material). In certain embodiments, the carrier
material varies from about 5 to about 95% of the total compositions (weight: weight).
[0254] It should be understood that in addition to the ingredients particularly mentioned
above the compositions of these embodiments may include other agents conventional
in the art having regard to the type of composition in question, for example those
suitable for oral administration may include flavoring agents.
Abbreviations
[0255] The abbreviations as used herein have respective meanings as follows:
- ACN
- acetonitrile
- aq.
- aqueous
- AXI
- anion exchange isocratic
- AZ-H
- amylose tris(3-chloro-4-methylphenylcarbamate)
- AZT
- azidothymidine or zidovudine
- atm
- atmospheres
- Bn
- benzyl
- bNAbs
- broadly neutralizing HIV antibodies
- Boc or BOC
- tert-butoxycarbonyl
- Boc2O
- di-tert-butyl dicarbonate
- Cbz
- benzyloxycarbonyl
- CbzCl or Cbz-Cl
- benzyl chloroformate
- Cp
- cyclopentadienyl
- CC50
- 50% cytotoxic concentration
- CCM
- cell culture medium
- Cp2TiMe2
- dimethyltitanocene or bis(cyclopentadienyl)dimethyltitanium or Petasis reagent
- DBU
- 1,8-diazabicyclo[5.4.0]undec-7-ene
- DCE
- dichloroethane
- DCM
- dichloromethane
- dd
- doublet of doublets
- ddd
- doublet of doublet of doublets
- dddd
- doublet of doublet of doublet of doublets
- ddq
- doublet of doublet of quartets
- ddt
- doublet of doublet of triplets
- DIPEA
- N,N-diisopropylethylamine
- DMF
- dimethylformamide
- DMP
- Dess Martin periodinane
- DMSO
- dimethylsulfoxide
- dpm
- dipivaloylmethanato or 2,2,6,6-tetramethyl-3,5-heptanedionato
- dq
- doublet of quartets
- dt
- doublet of triplets
- dtd
- doublet of triplet of doublets
- EC50
- half maximal effective concentration
- Et
- ethyl
- Et2O
- diethyl ether
- Et3N
- triethylamine
- EtOAc
- ethyl acetate
- EtOH
- ethanol
- FBS
- fetal bovine serum (culture medium)
- Gen
- Generation
- Grubbs Gen 1
- Grubbs Catalystâ„¢ 1stGeneration
- h
- hour(s)
- HATU
- 2-(7-aza-1H-benzotriazole-1-yl)-1,1,3,3-tetramethyluronium hexafluorophosphate
- HPLC
- high pressure liquid chromatography
- HS
- human serum
- Hz
- hertz
- IA
- amylose tris(3,5-dimethylphenylcarbamate)
- IB
- cellulose tris(3,5-dimethylphenylcarbamate)
- IPA
- isopropyl alcohol
- LA
- long-acting
- LCMS or LC-MS
- liquid chromatography-mass spectrometry
- m
- multiplet
- M
- Molar
- Me
- methyl
- MeCN
- acetonitrile
- MeI
- methyl iodide
- MeLi
- methyllithium
- MeMgBr
- methylmagnesium bromide
- MeOH
- methanol
- Me2S
- dimethyl sulfide
- Me3SiCHN2
- (trimethylsilyl)diazomethane
- MHz
- megahertz
- min.
- minute(s)
- mmol
- millimole
- µM
- micromolar
- µmol
- micromole
- mL
- milliliter
- Mn(dpm)3
- tris(dipivaloylmethanato)manganese
- MS
- mass spectroscopy
- MT-4 or MT4
- metallothionein 4 human T cell line
- m/z
- Mass to charge
- N
- Normal
- NMR
- nuclear magnetic resonance
- OAc
- acetate
- OD-H
- cellulose tris(3,5-dimethylphenylcarbamate)
- p
- pentet
- PA
- protein adjusted
- Ph
- phenyl
- PhCHO
- benzaldehyde
- PhSiH3
- phenylsilane
- ppm
- parts per million
- prep.
- Preparative
- q
- quartet
- qd
- quartet of doublets
- rac
- racemic
- rel
- relative (stereochemistry or configuration)
- RLuc
- Renilla luciferase or Renilla-luciferin 2-monooxygenase
- RP
- reverse phase
- RPMI
- Roswell Park Memorial Institute (culture medium)
- RT or R.T.
- room temperature
- s
- singlet
- SFC
- supercritical fluid chromatography
- SGC
- solvating gas chromatography
- STAB
- sodium triacetoxyborohydride
- t
- triplet
- td
- triplet of doublets
- tdd
- triplet of doublet of doublets
- TFA
- trifluoroacetic acid
- THF
- tetrahydrofuran
- Ti(OEt)4
- titanium(IV) ethoxide
- TMS
- trimethylsilyl
- TLR
- toll-like receptor
- tt
- triplet of triplets
- UV
- ultraviolet
- wt
- weight
[0256] The following examples are provided for purposes of illustration, not limitation.
EXAMPLES
Example 1: Preparation of (S)- and (R)-N-(2,4-difluorobenzyl)-13-hydroxy-1,12-dioxo-1,4,5,7,8,12-hexahydro-3H-2,8-methanopyrido[1,2-d][1,4,7]oxadiazecine-11-carboxamide
(1-1, 1-2):
[0257]

Synthesis of tert-butyl 3-methylene-1,5-oxazocane-5-carboxylate (1a):
[0258] A solution of
tert-butyl N-(3-hydroxypropyl)carbamate (1005.4 mg, 5.74 mmol) in DMF (20 mL) was stirred
at ice-salt bath as 60% sodium hydride in mineral oil (~526 mg, 13.2 mmol) was added
portionwise. After stirring ~30 minutes at the cold bath, 3-chloro-2-(chloromethyl)prop-1-ene
(0.61 mL, 5.80 mmol) was added over 15 minutes using syringe drive. The resulting
mixture was stirred at room temperature for 2 h. The reaction mixture was quenched
by addition of ice water slowly and diluted with water (~100 mL) before extracting
the product with ethyl acetate (2 x ~100 mL). After the organic extracts were washed
with water (~100-150 mL x 1), the organic fractions were combined, dried over MgSO
4, filtered, and concentrated. The residue was purified by column chromatography on
silica gel eluting 0-~70% ethyl acetate in hexane to afford the title compound. MS
(
m/
z) 171.74 [M+H-C
4H
8]
+.
Synthesis of tert-butyl 3-oxo-1,5-oxazocane-5-carboxylate (1b):
[0259] tert-Butyl 3-methylene-1,5-oxazocane-5-carboxylate (
1a, 339 mg, 1.49 mmol) in methanol (10 mL) was stirred at -78 °C bath as ozone was bubbled
through the mixture until blue color appeared. When the blue ozone color appeared,
dimethyl sulfide (5 mL) was added and the resulting solution was stirred at room temperature
for 2 h. The solution was concentrated and the residue was purified by column chromatography
on silica gel eluting 0-100% ethyl acetate in hexane to afford the title compound.
MS (
m/
z) 251.96 [M+Na]
+.
Synthesis of tert-butyl 3-((tert-butylsulfinyl)amino)-1,5-oxazocane-5-carboxylate (1c):
[0260] A solution of
1b (315 mg, 1.38 mmol), rac-2-methylpropane-2-sulfinamide (170.3 mg, 1.41 mmol), and
titanium (IV) ethoxide (0.59 mL, 2.81 mmol) in THF (5.5 mL) was refluxed at 70 °C
bath for 1 h. The reaction mixture was cooled to room temperature and further cooled
to approximately -50 °C before 1 M L-Selectride in THF (5.5 mL) was added. After 30
min, the reaction mixture was slowly warmed to room temperature over 2 h. The reaction
mixture was cooled to 0 °C again and methanol added until there was no gas evolution.
Brine was added to the solution with vigorous stirring, the resulting mixture was
filtered through Celite
®, and the solids were washed with ethyl acetate. After the filtrate was extracted
with ethyl acetate (x 3), the combined organic fractions were washed with brine (x
1), combined, dried over MgSO
4, filtered, and concentrated. The residue was purified by column chromatography on
silica gel eluting 50-100% ethyl acetate in hexane, followed by 0-20% methanol in
ethyl acetate to afford the title compound. MS (
m/
z) 334.94 [M+H]
+.
Synthesis of methyl 13-methoxy-1,12-dioxo-1,4,5,7,8,12-hexahydro-3H-2,8-methanopyrido[1,2-d][1,4,7]oxadiazecine-11-carboxylate
(1d):
[0261] A solution of
1c (274 mg, 0.82 mmol) in dichloromethane (2 mL) was stirred at room temperature as
4 N HCl in dioxane (4 mL) was added. After 1 h, the resulting suspension was concentrated
and dried overnight. To the flask containing the residue were added dimethyl 3-methoxy-4-oxo-4H-pyran-2,5-dicarboxylate
(242.5 mg, 1.00 mmol) and sodium bicarbonate (278.4 mg, 3.31 mmol) in water (1 mL)
and methanol (3 mL) and the resulting mixture was stirred at room temperature for
24 h and at 40 °C bath.
[0262] The reaction mixture was cooled to room temperature, concentrated, and the residue
was dissolved in aqueous DMF, filtered, and purified by preparative HPLC (column,
Gemini 10µ C18 110A, AXI/; 250 x 21.2 mm) eluting 10-60% acetonitrile (0.1% TFA) in
water (0.1% TFA) over 20 minutes. Combined fractions were freeze-dried to afford the
title compound. MS (
m/
z) 323.16 [M+H]
+.
Synthesis of N-(2,4-difluorobenzyl)-13-methoxy-1,12-dioxo-1,4,5,7,8,12-hexahydro-3H-2,8-methanopyrido[1,2-d][1,4,7]oxadiazecine-11-carboxamide
(1e):
[0263] To a solution of methyl 13-methoxy-1,12-dioxo-1,4,5,7,8,12-hexahydro-3H-2,8-methanopyrido[1,2-d][1,4,7]oxadiazecine-11-carboxylate
(
1d, 30.8 mg, 95.6 µmol) in methanol (0.5 mL) was added 1 N lithium hydroxide (0.2 mL)
at room temperature and stirred at room temperature for 1 h. After the reaction mixture
was acidified with 1 N HCl (~0.2 mL), the resulting solution was concentrated to dryness
and co-evaporated with toluene (x 3). To the previous residue were added (2,4-difluorophenyl)methanamine
(26.1 mg, 182 µmol), 1-[bis(dimethylamino)methylene]-1H-1,2,3-triazolo[4,5-b]pyridinium
3-oxid hexafluorophosphate (HATU, 62.2 mg, 163.5 µmol), and DMF (1 mL) and stirred
at room temperature as N,N-diisopropylethylamine (0.1 mL, 574.1 µmol). After 1 h,
the reaction mixture was dissolved in ethyl acetate and washed with saturated ammonium
chloride solution (x 2), saturated sodium bicarbonate solution (x 2) and brine (x
1). After the aq. fractions were extracted with ethyl acetate (x 1), the two organic
fractions were combined, dried over MgSO
4, filtered, and concentrated. The residue was dissolved in DMF, filtered, and purified
by preparative HPLC (column, Gemini 10µ C18 110A, AXI/; 250 x 21.2 mm) eluting 10-60%
acetonitrile (0.1% TFA) in water (0.1% TFA) over 20 minutes. Combined fractions were
freeze-dried to afford the title compound. MS (
m/
z) 434.22 [M+H]
+.
Synthesis of (rac). (S)- and (R)-N-(2,4-difluorobenzyl)-13-hydroxy-1,12-dioxo-1,4,5,7,8,12-hexahydro-3H-2,8-methanopyrido[1,2-d][1,4,7]oxadiazecine-11-carboxamide
(1, 1-1, 1-2):
[0264] To a solution of N-(2,4-difluorobenzyl)-13-methoxy-1,12-dioxo-1,4,5,7,8,12-hexahydro-3H-2,8-methanopyrido[1,2-d][1,4,7]oxadiazecine11-carboxamide
(
1e, 13.7 mg, 31.6 µmol) in acetonitrile (1 mL) was added magnesium bromide (16.2 mg,
88.5 µmol) at room temperature and the resulting mixture was stirred at 50 °C bath.
After 1 h, the reaction mixture was concentrated and the residue was triturated with
2 N HCl (~0.5 mL) and water (~1.5 mL) at 0 °C. After sonication, the suspension was
diluted with DMF (3 mL) to make it a solution, before filtration. The filtered solution
was purified by preparative HPLC (column, Gemini 10µ C18 110A, AXI/; 250 x 21.2 mm)
eluting 10-60% acetonitrile (0.1% TFA) in water (0.1% TFA) over 20 minutes. Combined
fractions were freeze-dried to afford the title compound. MS (
m/
z) 420.23 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-
d3) δ 10.31 (s, 1H), 8.40 (s, 1H), 7.40 (td,
J= 8.8, 6.4 Hz, 1H), 6.93 (ddq,
J = 10.8, 5.8, 2.8 Hz, 2H), 4.57 (d,
J = 5.2 Hz, 2H), 4.43 - 4.26 (m, 2H), 4.07 (d,
J = 33.0 Hz, 4H), 3.95 (dd,
J = 14.9, 1.7 Hz, 1H), 3.75 (s, 1H), 3.13 (ddd,
J = 13.9, 7.5, 4.6 Hz, 1H), 2.06 - 1.96 (m, 1H), 1.86 (s, 1H).
19F NMR (376 MHz, Acetonitrile-
d3) δ - 114.07 (p,
J = 7.6 Hz), -116.55 (q,
J = 8.7 Hz).
[0265] N-(2,4-Difluorobenzyl)-13-hydroxy-1,12-dioxo-1,4,5,7,8,12-hexahydro-3H-2,8-methanopyrido[1,2-d][1,4,7]oxadiazecine-11-carboxamide
(
1, 15 mg) was separated into its individual enantiomers by preparative SFC chromatography
on an AZ-H column using ethanol-TFA co-solvent to provide
1-1 and
1-2.
Example 2: Preparation of 13-hydroxy-1,12-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,7,8,12-hexahydro-3H-2,8-methanopyrido[1,2-d][1,4,7]oxadiazecine-11-carboxamide
(2):
[0266]

Synthesis of 13-methoxy-1,12-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,7,8,12-hexahydro-3H-2,8-methanopyrido[1,2-d][1,4,7]oxadiazecine-11-carboxamide
(2a):
[0267] To a solution of methyl 13-methoxy-1,12-dioxo-1,4,5,7,8,12-hexahydro-3H-2,8-methanopyrido[1,2-d][1,4,7]oxadiazecine-11-carboxylate
(
1d, 32.7 mg, 101.5 µmol) in methanol (0.5 mL) was added 1 N lithium hydroxide (0.2 mL)
at room temperature and stirred at room temperature for 1 h. After the reaction mixture
was acidified with 1 N HCl (~0.2 mL), the resulting solution was concentrated to dryness
and co-evaporated with toluene (x 3). To the previous residue were added (2,4,6-trifluorophenyl)methanamine
(30.8 mg, 191.15 µmol), 1-[bis(dimethylamino)methylene]-1H-1,2,3-triazolo[4,5-b]pyridinium
3-oxid hexafluorophosphate (HATU, 57.9 mg, 152.2 µmol), and DMF (1 mL) and stirred
at room temperature as N,N-diisopropylethylamine (0.1 mL, 574.1 µmol). After 1 h,
the reaction mixture was dissolved in ethyl acetate and washed with saturated ammonium
chloride solution (x 2), saturated sodium bicarbonate solution (x 2) and brine (x
1). After the aq. fractions were extracted with ethyl acetate (x 1), the two organic
fractions were combined, dried over MgSO
4, filtered, and concentrated. The residue was dissolved in DMF, filtered, and purified
by preparative HPLC, twice (column, Gemini 10µ C18 110A, AXI/; 250 x 21.2 mm) eluting
10-60% acetonitrile (0.1% TFA) in water (0.1% TFA) over 20 minutes. Combined fractions
were freeze-dried to afford the title compound. MS (
m/
z) 452.23 [M+H]
+.
Synthesis of 13-hydroxy-1,12-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,7,8,12-hexahydro-3H-2,8-methanopyrido[1,2-d][1,4,7]oxadiazecine-11-carboxamide
(2):
[0268] To a solution of 13-methoxy-1,12-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,7,8,12-hexahydro-3H-2,8-methanopyrido[1,2-d][1,4,7]oxadiazecin-11-carboxamide
(
2a, 9.3 mg, 20.6 µmol) in acetonitrile (1 mL) was added magnesium bromide (16.2 mg,
88.0 µmol) at room temperature and the resulting mixture was stirred at 50 °C bath.
After 30 min, the reaction mixture was cooled and concentrated, and the residue was
dissolved in DMF (0.5 mL) and 2 N HCl (0.1 mL). After filtering the solution, the
filtrate was purified by preparative HPLC (column, Gemini 10µ C18 110A, AXI/; 250
x 21.2 mm) eluting 10-60% acetonitrile (0.1% TFA) in water (0.1% TFA) over 20 minutes.
Combined fractions were freeze-dried to afford the title compound. MS (
m/
z) 420.23 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-
d3) δ 10.31 (s, 1H), 8.40 (s, 1H), 7.40 (td,
J = 8.8, 6.4 Hz, 1H), 6.93 (ddq,
J = 10.8, 5.8, 2.8 Hz, 2H), 4.57 (d,
J = 5.2 Hz, 2H), 4.43 - 4.26 (m, 2H), 4.07 (d,
J = 33.0 Hz, 4H), 3.95 (dd,
J = 14.9, 1.7 Hz, 1H), 3.75 (s, 1H), 3.13 (ddd,
J = 13.9, 7.5, 4.6 Hz, 1H), 2.06 - 1.96 (m, 1H), 1.86 (s, 1H).
19F NMR (376 MHz, Acetonitrile-
d3) δ -114.07 (p,
J = 7.6 Hz), -116.55 (q,
J = 8.7 Hz).
Example 3: Preparation of (R)- and (S)- (7R)-4,4-difluoro-12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(3-1, 3-2):
[0269]

Synthesis of 1-benzyl-5,5-difluoropiperidine-2-carboxylate (3b):
[0270] A solution of 1-
tert-butoxycarbonyl-5,5-difluoro-piperidine-2-carboxylic acid (
3a, 1.999 g, 7.54 mmol) was dissolved in methanol at 0 °C, and 2 M (trimethylsilyl)diazomethane
in diethyl ether (~10 mL) was added until yellow color persisted. After 15 min, dilute
acetic acid was added to the reaction mixture until the yellow color disappeared,
and the mixture was concentrated. The resulting residue was purified by column chromatography
on silica gel eluting 0-30% ethyl acetate in hexane to afford 1-(
tert-butyl) 2-methyl 5,5-difluoropiperidine-1,2-dicarboxylate.
[0271] A solution of 1-(
tert-butyl) 2-methyl 5,5-difluoropiperidine-1,2-dicarboxylate (1.94 g, 6.93 mmol) was
dissolved in dichloromethane (15 mL) and 4 N HCl in dioxane (15 mL) and stirred at
room temperature. After 3 h, the solution was concentrated and the residue was dissolved
in saturated sodium bicarbonate solution and the product was extracted with ethyl
acetate (x 2). The organic extracts were washed with brine (x 1), dried over MgSO
4, filtered, and concentrated. The residue was purified by column chromatography on
silica gel eluting 0-100% ethyl acetate in hexane to afford methyl 5,5-difluoropiperidine-2-carboxylate.
[0272] A solution of methyl 5,5-difluoropiperidine-2-carboxylate (962 mg, 5.37 mmol) in
DMF (15 mL) was stirred at 0 °C as 60% sodium hydride in mineral oil (305 mg, 7.63
mmol) was added portion wise. After 30 minutes at 0 °C, benzyl bromide (0.96 mL, 8.1
mmol) was added. After the reaction mixture was stirred at 0 °C for 1 h and room temperature
for 1 h, additional 60% sodium hydride in mineral oil (150 mg, 3.75 mmol) and benzyl
bromide (0.5 mL, 4.20 mmol) were added at room temperature and stirred at room temperature
for 2.5 h. The reaction mixture was quenched with 2 N HCl (~4 mL) at 0 °C and diluted
with saturated sodium bicarbonate solution (~100 mL) before the product was extracted
with ethyl acetate (~100 mL x 2). The organic extracts were washed with water (150
mL x 1), combined, dried over MgSO
4, filtered, concentrated, and purified by column chromatography on silica gel eluting
0-100% ethyl acetate in hexane to afford the title compound. MS (
m/
z) 270.10 [M+H]
+.
Synthesis of 6-azido-1-benzyl-3,3-difluoroazepane (3c):
[0273] A solution of methyl 1-benzyl-5,5-difluoro-piperidine-2-carboxylate (1011 mg, 3.76
mmol) in THF (10 mL) was stirred at 0 °C as 1 M LiAlH
4 (5 mL, 5 mmol) was added. After 30 minutes at 0 °C, the reaction mixture was vigorously
stirred at 0 °C and quenched by dropwise addition of water (0.19 mL), 15% NaOH (0.19
mL), and water (0.57 mL), sequentially, and diluted with ethyl ether (~15 mL). After
the resulting suspension was vigorously stirred for 30 minutes at 0 °C, the mixture
was filtered through Celite
® and the filtrate was treated with MgSO
4 and filtered again. The filtrate was concentrated to afford (1-benzyl-5,5-difluoropiperidin-2-yl)methanol.
MS (
m/
z) 242.10 [M+H]
+.
[0274] (1-Benzyl-5,5-difluoro-2-piperidyl)methanol (606.6 mg, 2.51 mmol) was dissolved in
toluene (10 mL) and thionyl chloride (3 mL, 41.1 mmol) was added. The resulting mixture
was stirred at 60 °C. After 1.25 h, the reaction mixture was concentrated and the
residue was dissolved in saturated sodium bicarbonate solution (~20 mL) and ethyl
acetate (~25 mL). After two fractions were separated, the aqueous fraction was extracted
with ethyl acetate (~25 mL x 1). The organic fractions were washed with brine (~20
mL x 1), combined, dried over MgSO
4, filtered, and concentrated to afford unpurified 1-benzyl-2-(chloromethyl)-5,5-difluoropiperidine.
MS (
m/
z) 260.10 [M+H]
+.
[0275] The unpurified chloride and sodium azide (187 mg, 2.88 mmol) in DMSO (4 mL) was stirred
at 90 °C bath for 4 h and cooled at room temperature. The reaction mixture was diluted
with water (~50 mL) and saturated sodium bicarbonate solution (~5 mL) and the product
was extracted with ethyl acetate (~30 mL x 3). The extracts were washed with water
(~50 mL x 1), combined, dried (Na
2SO
4), and concentrated. The residue was purified using column chromatography on silica
gel eluting 0-10% ethyl acetate in hexane to afford the title compound. MS (
m/
z) 267.06 [M+H]
+.
Synthesis of 12-(benzyloxy)-4,4-difluoro-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide (3d):
[0276] A suspension of 6-azido-1-benzyl-3,3-difluoro-azepane (323 mg, 1.21 mmol) and 20%
palladium hydroxide on carbon (49 mg) in methanol (10 mL) and concentrated HCl (0.5
mL) was stirred under H
2 atmosphere for 3 h. The reaction mixture was filtered through Celite
® and washed with methanol. The filtrate and washes were combined and concentrated
completely to obtain unpurified 6,6-difluoroazepan-3-amine dihydrochloride.
[0277] Unpurified 6,6-difluoroazepan-3-amine dihydrochloride (119.9 mg, 0.54 mmol), methyl
3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate (280.8
mg, 0.63 mmol), and sodium bicarbonate (238.7 mg, 2.84 mmol) were dissolved in methanol
(5 mL) and water (1 mL) and the resulting solution was stirred at 55 °C bath for 20
h. The reaction mixture was concentrated and the residue was dissolved in ethyl acetate
and water. After two fractions were separated, the aqueous fraction was extracted
with ethyl acetate (x 1), and the two organic fractions were washed with water (x
1), combined, dried over MgSO
4, filtered, and concentrated. The residue was purified by column chromatography on
silica gel eluting 0-5% methanol in dichloromethane to afford partially purified product.
[0278] The partially purified product was dissolved in DMF, filtered, and purified by preparative
HPLC (column, Gemini 10µ C18 110A, AXI/; 250 x 21.2 mm) eluting 30-90% acetonitrile
(0.1% TFA) in water (0.1% TFA) over 20 min, and the collected fraction was freeze-dried
to afford the title compound. MS (
m/
z) 548.14 [M+H]
+.
Synthesis of (R)- and (S)-(7R)-4,4-difluoro-12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(3-1. 3-2)
[0279] 12-(Benzyloxy)-4,4-difluoro-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(
3d, 140.7 mg) was separated into enantiomers by preparative SFC chromatography on an
IA column using methanol co-solvent to provide 47.4 mg of
3d-1 and 46.9 mg of
3d-2. The separated enantiomers were dissolved in toluene (0.5 mL) and trifluoroacetic
acid (3 mL) and stirred at room temperature for 30 minutes. The individual reactions
were concentrated and the residue was purified using column chromatography on silica
gel eluting 0-14% methanol in dichloromethane to provide the respective title compounds.
MS (
m/
z) 458.16 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-
d3) δ 12.34 (s, 1H), 10.38 (s, 1H), 8.27 (s, 1H), 7.02 - 6.66 (m, 2H), 5.45 (s, 2H),
4.70 (ddt,
J = 14.4, 11.6, 2.8 Hz, 1H), 4.59 (d,
J = 5.8 Hz, 1H), 4.37 (dd,
J = 13.5, 4.2 Hz, 1H), 4.04 (dd,
J = 13.6, 8.2 Hz, 1H), 3.89 (ddt,
J = 11.8, 7.8, 3.7 Hz, 1H), 3.19 (ddd,
J = 31.8, 14.2, 1.9 Hz, 1H), 2.42 - 2.22 (m, 1H), 2.22 - 2.06 (m, 1H), 2.06 - 1.98
(m, 1H), 1.80 - 1.62 (m, 1H).
Example 4: Preparation of (R)- and (S)-(7R)-N-(2,4-difluorobenzyl)-4,4-difluoro-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(4-1, 4-2):
[0280]

Synthesis of 12-(benzyloxy)-N-(2,4-difluorobenzyl)-4,4-difluoro-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(4a):
[0281] Unpurified 6,6-difluoroazepan-3-amine dihydrochloride (116.7 mg, 0.52 mmol), methyl
3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate (273.2
mg, 0.64 mmol), and sodium bicarbonate (225.7 mg, 2.69 mmol) were dissolved in methanol
(5 mL) and water (1 mL) and the resulting solution was stirred at 55 °C bath for 20
h. The reaction mixture was concentrated and the residue was dissolved in ethyl acetate
and water. After the two fractions were separated, the aqueous fraction was extracted
with ethyl acetate (x 1), and the two organic fractions were washed with water (x
1), combined, dried over MgSO
4, filtered, and concentrated. The residue was purified by column chromatography on
silica gel eluting 0-5% methanol in dichloromethane to afford partially purified product.
[0282] The partially purified product was dissolved in DMF, filtered, and purified by preparative
HPLC (column, Gemini 10µ C18 110A, AXI/; 250 x 21.2 mm) eluting 30-90% acetonitrile
(0.1% TFA) in water (0.1% TFA) over 20 min, and the collected fraction was freeze-dried
to afford the title compound. MS (
m/
z) 530.12 [M+H]
+.
Synthesis of (R)- and (S)-(7R)-N-(2,4-difluorobenzyl)-4,4-difluoro-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(4-1, 4-2):
[0283] 12-(Benzyloxy)-N-(2,4-difluorobenzyl)-4,4-difluoro-1,1-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(
4a, 133 mg) was separated into its individual enantiomers by preparative SFC chromatography
on an IA column using methanol co-solvent to provide
4a-1 and
4a-2. The separated enantiomers were dissolved in toluene (0.5 mL) and trifluoroacetic
acid (3 mL) and stirred at room temperature for 30 minutes. The individual reactions
were concentrated and the residue was purified using column chromatography on silica
gel eluting 0-14% methanol in dichloromethane to provide the title compounds. MS (
m/
z) 440.19 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-
d3) δ 12.36 (s, 1H), 10.40 (s, 1H), 8.28 (s, 1H), 7.47 - 7.31 (m, 1H), 6.94 (ddq,
J = 11.0, 5.2, 2.8 Hz, 2H), 4.71 (tt,
J = 11.7, 2.8 Hz, 1H), 4.57 (d,
J = 6.0 Hz, 2H), 4.38 (dd,
J = 13.5, 4.2 Hz, 1H), 4.06 (dd,
J = 13.6, 8.1 Hz, 1H), 3.90 (td,
J = 8.2, 4.2 Hz, 1H), 3.20 (ddd,
J = 31.8, 14.2, 1.9 Hz, 1H), 2.38 - 2.22 (m, 1H), 2.19 - 2.08 (m, 1H), 2.07 - 1.98
(m, 1H), 1.80 - 1.63 (m, 1H).
Example 5: Preparation of (R)- and (S)- N-(2,4-difluorobenzyl)-13-hydroxy-1,12-dioxo-1,3,4,5,6,7,8,12-octahydro-2,8-methanopyrido[1,2-a][1,4]diazecine-11-carboxamide
(5-1, 5-2):
[0284]

Synthesis of methyl 13-methoxy-1,12-dioxo-1,3,4,5,6,7,8,12-octahydro-2,8-methanopyrido[1,2-a][1,4]diazecine-11-carboxylate
(5a):
[0285] A vial was charged with azocan-3-amine (0.13 g, 1.0 mmol), sodium bicarbonate (66
mg, 0.79 mmol), methanol (3 mL), and water (0.3 mL). Dimethyl 3-methoxy-4-oxo-4H-pyran-2,5-dicarboxylate
(100 mg, 0.41 mmol) was added and the mixture was stirred at 30 °C. After 2 h, the
mixture was concentrated to dryness and purified by flash column chromatography (hexanes/EtOAc/MeOH)
to provide the title compound. MS (
m/
z) 321.1 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d3) δ 8.07 (s, 1H), 4.43 (ddd, J = 13.6, 8.8, 4.4 Hz,
1H), 4.18 (ddt, J = 7.9, 5.3, 2.2 Hz, 1H), 4.05 (s, 3H), 3.94 (dd, J = 14.4, 2.7 Hz,
1H), 3.85 (s, 3H), 3.65 (dd, J = 14.5, 2.1 Hz, 1H), 2.86 (ddd, J = 14.0, 6.2, 4.2
Hz, 1H), 2.16 (ddd, J = 15.1, 8.7, 5.4 Hz, 1H), 2.00 - 1.56 (m, 6H), 1.57 - 1.45 (m,
1H).
Synthesis of N-(2,4-difluorobenzyl)-13-methoxy-1,12-dioxo-1,3,4,5,6,7,8,12-octahydro-2,8-methanopyrido[1,2-a][1,4]diazecine-11-carboxamide
(5b):
[0286] Methyl 13-methoxy-1,12-dioxo-1,3,4,5,6,7,8,12-octahydro-2,8-methanopyrido[1,2-a][1,4]diazecine-11-carboxylate
(80 mg, 0.25 mmol) was dissolved in methanol (3 mL), and 1M NaOH (0.75 mL, 0.75 mmol)
was added. After 25 minutes, the reaction was quenched via the addition of 2M HCl
and concentrated to dryness. The residue was dissolved in DCM (2 mL) with (2,4-difluorophenyl)methanamine
(54 mg, 0.37 mmol) and triethylamine (0.10 mL, 0.75 mmol). HATU (114 mg, 0.30 mmol)
was added and the mixture was stirred at room temperature. After 15 minutes, the reaction
was concentrated to dryness, purified by preparatory HPLC (MeCN/water with 0.1% TFA),
and lyophilized to provide the title compound. MS (
m/
z) 432.2 [M+H]
+.
Synthesis of (8R)- and (8S)-N-(2,4-difluorobenzyl)-13-hydroxy-1,12-dioxo-1,3,4,5,6,7,8,12-octahydro-2,8-methanopyrido[1,2-a][1,4]diazecine-11-carboxamide
(5-1, 5-2):
[0287] N-(2,4-Difluorobenzyl)-13-methoxy-1,12-dioxo-1,3,4,5,6,7,8,12-octahydro-2,8-methanopyrido[1,2-a][1,4]diazecine-11-carboxamide
(43 mg) was separated into its individual enantiomers by preparative SFC chromatography
on an IB column using MeOH co-solvent to provide
5c-1 and
5c-2. The separated enantiomers were dissolved in DMF (0.5 mL) with lithium chloride (84
mg, 2.0 mmol) and stirred at 100 °C for 1 h. The individual reactions were cooled
to room temperature, diluted with aqueous TFA, purified by preparatory HPLC (MeCN/water
with 0.1% TFA), and lyophilized to provide the title compounds. MS (
m/
z) 418.2 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d3) δ 10.47 (s, 1H), 8.37 (s, 1H), 7.43 (td, J = 9.3,
8.8, 6.5 Hz, 1H), 7.10 - 6.83 (m, 2H), 4.60 (d, J = 5.8 Hz, 2H), 4.48 (tt, J = 6.1,
2.5 Hz, 1H), 4.25 (ddd, J = 13.6, 8.3, 5.2 Hz, 1H), 3.91 (dd, J = 14.5, 2.8 Hz, 1H),
3.80 (dd, J = 14.5, 2.1 Hz, 1H), 3.03 (ddd, J = 13.8, 6.0, 4.8 Hz, 1H), 2.30 - 2.17
(m, 1H), 1.94 - 1.70 (m, 3H), 1.62 - 1.47 (m, 4H).
Example 6: Preparation of (7R,13R)-N-(2,4-difluorobenzyl)-12-hydroxy-13-methyl-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(7):
[0288]

Synthesis of (R)-3-(dibenzylamino)azepan-2-one (7a):
[0289] (3R)-3-Aminoazepan-2-one (1.51 g, 11.8 mmol) was combined with benzaldehyde (3.61
mL, 35 mmol) and molecular sieves (4 g) in 1,2-DCE at 15 °C. Sodium triacetoxyborohydride
(7.49 g, 35.3 mmol) was added. After stirring for 90 minutes, the mixture was quenched
with aqueous sodium bicarbonate and filtered. The organic layer was separated, dried
over Na
2SO
4, filtered, concentrated, and purified by flash column chromatography (hexanes/EtOAc)
to provide the title compound. MS (
m/
z) 309.4 [M+H]
+.
1H NMR (400 MHz, Chloroform-d) δ 7.41 (d, J = 7.2 Hz, 4H), 7.37 - 7.30 (m, 4H), 7.27
- 7.19 (m, 2H), 5.64 (s, 1H), 4.09 (d, J = 14.4 Hz, 2H), 3.91 (d, J = 14.4 Hz, 2H),
3.44 (d, J = 10.1 Hz, 1H), 3.12 (dt, J = 14.0, 6.7 Hz, 1H), 2.92 (ddd, J = 15.3, 10.8,
5.4 Hz, 1H), 2.01 (d, J = 11.4 Hz, 2H), 1.96 - 1.65 (m, 2H), 1.53 - 1.32 (m, 2H).
Synthesis of (2R,3R)-N,N-dibenzyl-2-methylazepan-3-amine (7b):
[0290] (3
R)-3-(Dibenzylamino)azepan-2-one (
7a, 637 mg, 2.07 mmol) was suspended in toluene (20 mL) with triethylamine (0.57 mL,
4.1 mmol) at 0 °C. Chlorotrimethylsilane (0.29 mL, 2.3 mmol) in toluene (3 mL) was
added dropwise. After 5 minutes, the mixture was warmed to 50 °C and stirred for 3
h. The slurry was cooled to 5 °C and the precipitate was removed by filtration, rinsing
forward with 1:1 hexanes:ether. The supernatant was concentrated to dryness and placed
under high vacuum overnight. The residue was dissolved in ether (30 mL), cooled to
-78 °C and 1.6 M MeLi (2.84 mL) was added slowly. The reaction was allowed to warm
to room temperature and an additional 1.6M MeLi (1 mL) was added. After 3 h the reaction
was cooled to 5 °C, quenched with aqueous ammonium chloride, and diluted with aqueous
sodium bicarbonate and ethyl acetate. The organic layer was removed, dried over Na
2SO
4, filtered, and concentrated. The unpurified mixture was dissolved in DCM (50 mL)
with 5 g 3Å molecular sieves at 5 °C. After stirring for 5 minutes, sodium triacetoxyborohydride
(0.88 g, 4.1 mmol) was added and the reaction was stirred overnight, warming slowly
to room temperature. The reaction was quenched with aqueous sodium bicarbonate and
filtered. The organic layer was separated, dried over Na
2SO
4, filtered, concentrated, and purified by flash column chromatography (hexanes/EtOAc)
to provide the title compound. MS (
m/
z) 309.2 [M+H]
+.
1H NMR (400 MHz, Chloroform-d) δ 7.48 (d, J = 7.2 Hz, 4H), 7.33 (dd, J = 8.3, 6.8 Hz,
4H), 7.24 (t, J = 7.2 Hz, 2H), 4.15 (d, J = 14.3 Hz, 2H), 3.53 (d, J = 14.3 Hz, 2H),
3.19 - 3.01 (m, 1H), 2.96 - 2.79 (m, 1H), 2.69 (dt, J = 10.4, 6.1 Hz, 1H), 2.45 (td,
J = 12.3, 3.1 Hz, 1H), 2.13 - 2.00 (m, 1H), 1.94 - 1.68 (m, 3H), 1.58 - 1.38 (m, 1H),
1.28 (d, J = 6.9 Hz, 3H), 1.26 - 1.11 (m, 1H).
Synthesis of (7R,13R)-12-(benzyloxy)-N-(2,4-difluorobenzyl)-13-methyl-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(7c):
[0291] (2R,3R)-N,N-Dibenzyl-2-methyl-azepan-3-amine (
7b, 90 mg, 290 µmol) was combined with Pd/C (10 wt%, wet, E101 NE/W, 155 mg) in ethanol
(20 mL) and stirred under an atmosphere of hydrogen gas for 120 h. The mixture was
degassed with argon, filtered through Celite
®, and 2M HCl (2 mL) was added. The solution was concentrated to dryness to provide
(2R,3R)-2-methylazepan-3-amine as its hydrochloride salt. MS (
m/
z) 129.2 [M+H]
+.
[0292] (2R,3R)-2-Methylazepan-3-amine dihydrochloride (58 mg, 0.29 mmol) was dissolved in
methanol (3 mL) and water (0.5 mL) with sodium bicarbonate (151 mg, 1.79 mmol). Methyl
3-(benzyloxy)-5-((2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate (110
mg, 0.26 mmol) was added, and the mixture was stirred at 65 °C for 4 h. The mixture
was cooled to room temperature, concentrated, dissolved in DCM, filtered, concentrated,
purified by preparatory HPLC (MeCN/water with 0.1% TFA), and lyophilized to provide
the title compound. MS (
m/
z) 508.6 [M+H]
+.
Synthesis of (1R,14R)-N-[(2,4-difluorophenyl)methyl]-6-hydroxy-14-methyl-5,8-dioxo-2,9-diazatricyclo[7.4.1.02,7]tetradeca-3,6-diene-4-carboxamide
(7):
[0293] (7R,13R)-12-(Benzyloxy)-N-(2,4-difluorobenzyl)-13-methyl-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(66 mg, 0.13 mmol) was dissolved in toluene (1 mL) with TFA (2 mL). After 135 minutes,
the reaction was concentrated to dryness, purified by preparatory HPLC (MeCN/water
with 0.1% TFA), and lyophilized to provide the title compound. Chiral HPLC analysis
revealed it to be a mixture of enantiomers. MS (
m/
z) 418.4 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d3) δ 10.43 (s, 1H), 8.43 (s, 1H), 7.44 (td, J = 9.3,
8.8, 6.5 Hz, 1H), 7.21 - 6.78 (m, 2H), 4.60 (d, J = 5.9 Hz, 2H), 4.44 (dt, J = 5.2,
2.2 Hz, 1H), 4.26 (ddd, J = 13.3, 8.9, 7.5 Hz, 1H), 3.86 (qd, J = 6.9, 1.7 Hz, 1H),
3.21 (ddd, J = 13.3, 7.4, 2.9 Hz, 1H), 2.13 - 1.99 (m, 1H), 1.89 - 1.60 (m, 1H), 1.28
(d, J = 15.2 Hz, 1H), 1.22 (d, J = 6.9 Hz, 3H).
Example 7: Preparation of (7S, 13S)-12-hydroxy-13-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(8):
[0294]

[0295] (7S, 13S)-12-hydroxy-13-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(
8) was prepared analogous to (7R,13R)-N-(2,4-difluorobenzyl)-12-hydroxy-13-methyl-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(7), beginning with (S)-3-aminoazepan-2-one and utilizing methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate
in place of methyl 3-(benzyloxy)-5-((2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate.
HPLC analysis indicated a mixture of enantiomers. MS (
m/
z) 436.2 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d3) δ 10.40 (s, 1H), 8.43 (s, 1H), 6.98 - 6.79 (m, 2H),
4.62 (d, J = 5.5 Hz, 2H), 4.52 - 4.37 (m, 1H), 4.24 (ddd, J = 13.3, 8.9, 7.5 Hz, 1H),
3.86 (qd, J = 6.9, 1.7 Hz, 1H), 3.20 (ddd, J = 13.4, 7.4, 2.9 Hz, 1H), 2.06 - 2.00
(m, 1H), 1.88 - 1.66 (m, 2H), 1.34 - 1.13 (m, 4H).
Example 8: Preparation of (7R,13S)-N-(2,4-difluorobenzyl)-12-hydroxy-13-methyl-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(9):
[0296]

Synthesis of tert-butyl (R)-3-(dibenzylamino)-2-methyleneazepane-1-carboxylate (9a):
[0297] (3R)-3-(Dibenzylamino)azepan-2-one (7a, 735 mg, 2.38 mmol) was combined in 1,2-DCE
with triethylamine (0.66 mL, 4.77 mmol), 4-(dimethylamino)pyridine (87 mg, 0.71 mmol),
and Boc
2O (780 mg, 3.6 mmol). The mixture was stirred for 3 days at 35 °C. Additional 4-(dimethylamino)pyridine
(291 mg, 2.38 mmol) and Boc
2O (630 mg, 2.9 mmol) were added, and the mixture was stirred at 60 °C for 4.5 h. The
mixture was cooled to 45 °C and more Boc
2O (1040 mg, 4.77 mmol) was added. The reaction was stirred overnight, cooled to room
temperature and quenched with aqueous ammonium chloride solution. The organic layer
was separated, dried over Na
2SO
4, filtered, concentrated, and purified by flash column chromatography (hexanes/EtOAc)
to provide
tert-butyl (R)-3-(dibenzylamino)-2-oxoazepane-1-carboxylate. MS (
m/
z) 409.5 [M+H]
+.
1H NMR (400 MHz, Chloroform-d) δ 7.37 (d, J = 7.2 Hz, 4H), 7.30 (t, J = 7.4 Hz, 4H),
7.22 (t, J = 7.2 Hz, 2H), 4.12 - 4.07 (m, 1H), 4.05 (d, J = 14.5 Hz, 2H), 3.87 (d,
J = 14.3 Hz, 2H), 3.63 - 3.47 (m, 1H), 2.83 (dd, J = 15.4, 10.4 Hz, 1H), 2.03 - 1.68
(m, 3H), 1.55 (d, J = 0.8 Hz, 9H), 1.53 - 1.38 (m, 2H).
[0298] tert-Butyl (3R)-3-(dibenzylamino)-2-oxo-azepane-1-carboxylate (463 mg, 1.13 mmol) was
placed in a round-bottom flask under argon and a solution of dimethyl titanocene (5%
in toluene/THF, 16 mL) was added. The mixture was stirred at 80 °C for 75 minutes,
cooled to 15 °C, and quenched with aqueous sodium bicarbonate solution. The organic
layer was separated, dried over Na
2SO
4, filtered, concentrated, and purified by flash column chromatography (hexanes/EtOAc)
to provide the title compound. MS (
m/
z) 407.5 [M+H]
+.
1H NMR (400 MHz, Chloroform-d) δ 7.41 (d, J = 7.2 Hz, 4H), 7.37 - 7.29 (m, 4H), 7.27
- 7.19 (m, 2H), 5.82 (d, J = 2.0 Hz, 1H), 5.17 (s, 1H), 3.97 (d, J = 14.0 Hz, 2H),
3.79 (dt, J = 14.1, 4.4 Hz, 1H), 3.47 (d, J = 14.0 Hz, 2H), 3.35 (dt, J = 9.9, 2.4
Hz, 1H), 2.85 (s, 1H), 1.95 (q, J = 16.1, 12.0 Hz, 2H), 1.69 - 1.58 (m, 1H), 1.55
- 1.47 (m, 1H), 1.38 (s, 9H), 1.25 - 1.16 (m, 1H).
Synthesis of tert-butyl (3R)-3-(benzylamino)-2-methyl-azepane-1-carboxylate (9b):
[0299] tert-Butyl (3R)-3-(dibenzylamino)-2-methylene-azepane-1-carboxylate (
9a, 256 mg, 0.63 mmol) was combined in isopropanol (3 mL) with
tert-butyl hydroperoxide (5-6M in decane, 214 µl) and phenylsilane (78 µl, 0.63 mmol)
under argon. Tris(dipivaloylmethanato)manganese (34 mg, 0.056 mmol) was added and
the reaction was stirred at room temperature. After 1 h, additional Tris(dipivaloylmethanato)manganese
(11 mg, 0.019 mmol) was added and stirring was continued. After an additional 30 minutes,
the reaction was concentrated, and purified by flash column chromatography (hexanes/EtOAc)
to provide the title compound as a mixture of diastereomers. MS (
m/
z) 319.3 [M+H]
+.
Synthesis of (7R)-12-(benzyloxy)-N-(2,4-difluorobenzyl)-13-methyl-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyridor1,2-a][1,4]diazonine-10-carboxamide (9c):
[0300] tert-Butyl (3R)-3-(benzylamino)-2-methyl-azepane-1-carboxylate (138 mg, 433 µmol) was combined
with Pd/C (10 wt%, wet, E101 NE/W, 138 mg) in ethanol (10 mL) under an atmosphere
of hydrogen gas and stirred vigorously overnight. The reaction was filtered through
Celite
® and concentrated to dryness to provide unpurified
tert-butyl (3R)-3-amino-2-methyl-azepane-1-carboxylate. MS (
m/
z) 229.0 [M+H]
+. This material was dissolved in methanol (5 mL) and water (0.5 mL), and sodium bicarbonate
(146 mg, 1.73 mmol) was added, followed by methyl 3-benzyloxy-5-[(2,4-difluorophenyl)methylcarbamoyl]-4-oxo-pyran-2-carboxylate
(186 mg, 0.43 mmol). The mixture was stirred at 45 °C for 5 minutes, warmed to 65
°C, and stirred for 40 minutes. The reaction was cooled to room temperature, concentrated
to dryness, dissolved in DCM, dried over Na
2SO
4, filtered, and concentrated. The residue was dissolved in toluene (4 mL), and TFA
(2 mL) was added. The reaction was concentrated to dryness, dissolved in methanol
(5 mL), and triethylamine (2 mL) was added. The mixture was warmed to 60 °C and stirred
overnight. The reaction was concentrated to dryness, purified by preparatory HPLC
(MeCN/water with 0.1% TFA), and lyophilized to provide the title compound as a mixture
of diastereomers with the major isomer being (7R,13S)-12-(benzyloxy)-N-(2,4-difluorobenzyl)-13-methyl-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide.
MS (
m/
z) 508.4 [M+H]
+.
Synthesis of (7R,13S)-N-(2,4-difluorobenzyl)-12-hydroxy-13-methyl-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide (9):
[0301] (1R)-6-Benzyloxy-N-[(2,4-difluorophenyl)methyl]-14-methyl-5,8-dioxo-2,9-diazatricyclo[7.4.1.02,7]tetradeca-3,6-diene-4-carboxamide
(99 mg, 0.20 mmol) was dissolved in 4 mL toluene and 2 mL TFA, and stirred at 30 °C.
After 1 h, the reaction was concentrated, purified by preparatory HPLC (MeCN/water
with 0.1% TFA), and lyophilized to provide the title compound. MS (
m/
z) 418.3 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d3) δ 10.42 (s, 1H), 8.38 (s, 1H), 7.51 - 7.35 (m, 1H),
7.09 - 6.91 (m, 2H), 4.60 (d, J = 5.8 Hz, 2H), 4.44 (d, J = 4.4 Hz, 1H), 4.37 (dt,
J = 14.3, 9.4 Hz, 1H), 4.24 - 4.14 (m, 1H), 2.23 - 2.05 (m, 2H), 2.04 - 1.98 (m, 1H),
1.78 - 1.62 (m, 2H), 1.50 (d, J = 7.4 Hz, 3H), 1.19 - 1.02 (m, 1H).
Example 9: Preparation of (7S- and 7R-)-6,6-difluoro-12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(10-1, 10-2):
[0302]

Synthesis of 12-(benzyloxy)-6-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide (10a):
[0303] A vial was charged with methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate
(350 mg, 0.78 mmol),
tert-butyl 3-amino-4-hydroxyazepane-1-carboxylate (180 mg, 0.78 mmol) and sodium bicarbonate
(131 mg, 1.56 mmol). Methanol (3.5 mL), water (3.5 mL) and 2-methyl tetrahydrofuran
(2 mL) were added. The reaction mixture was stirred at room temperature overnight
and partitioned between 1 N HCl and ethyl acetate. The organic layer was separated
and concentrated to dryness. The residue was dissolved in 1 mL of DCM and 3 mL of
4N HCl in dioxane, and the solution was stirred at room temperature for 2 h to remove
the Boc protecting group and concentrated to dryness. To the residue was added 10
mL of ethanol and DBU (0.47 mL, 3.12 mmol). The reaction mixture was heated to 120
°C for 30 minutes in microwave. After cooling to room temperature, the reaction mixture
was partitioned between 1 N HCl and ethyl acetate. The organic layer was separated
and concentrated to dryness to afford the title compound. MS (m/z) 528.17 [M+H]
+.
Synthesis of 12-(benzyloxy)-1,6,11-trioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(10b):
[0304] To a solution of 12-(benzyloxy)-6-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(
10a) (320 mg, 0.61 mmol) in dry DCM (15 mL) was added Dess Martin periodinane and the
mixture was stirred for 20 minutes at room temperature. DCM was added and the organic
phase was washed twice with 10 % sodium thiosulphate solution, twice with 0.5 N NaOH
and with brine. The organic phase was dried and evaporated. The residue was purified
by silica gel chromatography eluting with methanol in DCM to afford the title compound.
MS (
m/
z) 526.28 [M+H]
+.
Synthesis of 12-(benzyloxy)-6,6-difluoro-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide(10c):
[0305] To a solution of 12-(benzyloxy)-1,6,11-trioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(
10b) (200 mg. 0.38 mmol) in DCM (5 mL) cooled at -78 °C under argon was added Deoxo-Fluor
® (1.1 mmol, 0.42 mL, 50 % in toluene) under argon. The resulting mixture was stirred
at -78 °C and allowed to gradually warm to room temperature overnight. The mixture
was cooled at -78 °C and Deoxo-Fluor
® (0.76 mmol, 0.28 mL, 50 % in toluene) was added under argon. The reaction mixture
was stirred at room temperature for 1 day and diluted with DCM. The mixture was cooled
in an ice/water bath and quenched by dropwise addition of saturated aqueous sodium
bicarbonate. The resulting mixture was stirred for 1 h, more saturated aqueous sodium
bicarbonate was added, stirring continued for 10 minutes until bubbling ceased. The
organic layer was separated, dried over Na
2SO
4 and filtered. The filtrate was concentrated to dryness. The residue was purified
via silica gel chromatography eluting with EtOAc/hexane and purified by preparatory
HPLC (MeCN/water with 0.1% TFA), and lyophilized to afford the title compound. MS
(m/z) 548.25 [M+H]
+.
Synthesis of (7S- and 7R-)-6,6-difluoro-12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(10-1, 10-2):
[0306] 12-(Benzyloxy)-6,6-difluoro-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(
10c, 40 mg) was separated into its individual enantiomers by preparative SFC chromatography
on an IA column using MeOH co-solvent to provide
10c-1 and
10c-2. The separated enantiomers were dissolved in 0.5 mL toluene and 1 mL TFA and stirred
at room temperature for 1 h. The reaction mixture was concentrated and purified by
RP-HPLC eluting with ACN/water (0.1% TFA) to provide the title compounds. Peak 1:
MS (
m/
z) 458.12 [M+H]
+.
1H NMR (400 MHz, DMSO-d6) δ 10.63 (s, 1H), 10.26 (t, J = 5.8 Hz, 1H), 8.48 (s, 1H),
7.22 (t, J = 8.7 Hz, 2H), 5.26 - 5.17 (m, 1H), 4.58 (d, J = 5.8 Hz, 2H), 4.20 (dt,
J = 13.3, 8.7 Hz, 1H), 4.07 - 3.97 (m, 1H), 3.87 (dd, J = 15.5, 1.9 Hz, 1H), 3.18
(dd, J = 13.3, 6.7 Hz, 1H), 2.21 (s, 1H), 2.05 - 1.83 (m, 2H), 1.60 (dt, J = 34.9,
14.0 Hz, 1H). Peak 2: MS (m/z) 458.13 [M+H]+.
1H NMR (400 MHz, DMSO-d6) δ 10.63 (s, 1H), 10.27 (t, J = 5.8 Hz, 1H), 8.48 (s, 1H),
7.22 (t, J = 8.7 Hz, 2H), 5.21 (d, J = 8.0 Hz, 1H), 4.58 (d, J = 5.8 Hz, 2H), 4.32
- 4.15 (m, 1H), 4.10 - 3.94 (m, 1H), 3.87 (dd, J = 15.5, 2.0 Hz, 1H), 3.18 (dd, J
= 13.4, 6.6 Hz, 1H), 2.22 (s, 1H), 1.92 (d, J = 8.1 Hz, 2H), 1.71 - 1.43 (m, 1H).
Example 10: Preparation of 6,12-dihydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(11):
[0307]

[0308] 12-(Benzyloxy)-6-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(
10a) (20 mg) was dissolved in 0.3 mL toluene and 0.6 mL of TFA and stirred at room temperature
for 30 minutes. The reaction mixture was concentrated to dryness and the residue was
purified by RP-HPLC eluting with ACN/water (0.1% TFA) to provide the title compound.
MS (
m/
z) 438.18 [M+H]
+.
1H NMR (400 MHz, DMSO-d6) δ 10.74 (s, 1H), 10.44 (t, J = 5.8 Hz, 1H), 8.28 (s, 1H),
7.28 - 7.15 (m, 2H), 4.57 (d, J = 5.6 Hz, 3H), 4.13 (dt, J = 13.2, 9.2 Hz, 1H), 3.91
- 3.78 (m, 2H), 3.62 (dd, J = 15.0, 1.6 Hz, 1H), 3.12 (dt, J = 13.1, 4.5 Hz, 1H),
1.84 (d, J = 6.8 Hz, 2H), 1.66 (d, J = 14.5 Hz, 1H), 1.02 (td, J = 14.4, 13.5, 5.8
Hz, 1H).
Example 11: Preparation of N-(2,4-difluorobenzyl)-6,12-dihydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(12):
[0309]

Synthesis of 12-(benzyloxy)-N-(2,4-difluorobenzyl)-6-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide (12a):
[0310] 12-(Benzyloxy)-N-(2,4-difluorobenzyl)-6-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(
12a) was prepared similarly to compound
10a using methyl 3-(benzyloxy)-5-((2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate.
MS (m/z) 510.23 [M+H]
+.
Synthesis of N-(2,4-difluorobenzyl)-6,12-dihydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide (12):
[0311] The title compound was prepared similarly to compound
11 using compound
12a. MS (m/z) 420.15 [M+H]
+.
1H NMR (400 MHz, DMSO-d6) δ 10.77 (s, 1H), 10.43 (t, J = 5.9 Hz, 1H), 8.31 (s, 1H),
7.41 (td, J = 8.7, 6.6 Hz, 1H), 7.25 (ddd, J = 10.6, 9.3, 2.6 Hz, 1H), 7.12 - 7.02
(m, 1H), 5.37 (s, 1H), 4.61 - 4.52 (m, 3H), 4.20 - 4.08 (m, 1H), 3.86 (td, J = 14.0,
13.0, 4.4 Hz, 2H), 3.68 - 3.59 (m, 1H), 3.17 - 3.09 (m, 1H), 1.85 (d, J = 7.4 Hz,
2H), 1.68 (d, J = 14.9 Hz, 1H), 1.04 (s, 1H).
Example 12: Preparation of N-(2,4-difluorobenzyl)-6-fluoro-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(13):
[0312]

Synthesis of 12-(benzyloxy)-N-(2,4-difluorobenzyl)-6-fluoro-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(13a):
[0313] To a solution of 12-(benzyloxy)-N-(2,4-difluorobenzyl)-6-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(
12a, 47 mg. 0.092 mmol) in DCM (3 mL) cooled at -78 °C under argon was added Deoxo-Fluor
® (0.14 mmol, 0.05 mL, 50 % in toluene) under argon. The resulting mixture was stirred
at -78 °C and allowed to gradually warm to room temperature overnight. The mixture
was cooled at -78 °C, and Deoxo-Fluor
® (0.14 mmol, 0.05 mL, 50 % in toluene) was added under argon. The reaction mixture
was stirred at room temperature for 2 h and diluted with DCM. The mixture was cooled
in an ice/water bath and the reaction was quenched by dropwise addition of saturated
aqueous sodium bicarbonate. The resulting mixture was stirred for 1 h and more saturated
aqueous sodium bicarbonate was added, and stirring continued for 10 minutes until
bubbling ceased. The organic layer was separated, dried over Na
2SO
4 and filtered. The filtrate was concentrated to dryness to afford the title compound.
MS (m/z) 512.22 [M+H]
+.
Synthesis of N-(2,4-difluorobenzyl)-6-fluoro-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(13):
[0314] The title compound was prepared similarly to compound
11 using
13a. MS (m/z) 422.18 [M+H]
+.
1H NMR (400 MHz, DMSO-d6) δ 10.61 (s, 1H), 10.33 (t, J = 5.9 Hz, 1H), 8.60 (s, 1H),
7.41 (td, J = 8.7, 6.6 Hz, 1H), 7.25 (td, J = 9.6, 2.6 Hz, 1H), 7.07 (td, J = 8.7,
2.5 Hz, 1H), 5.10 - 5.03 (m, 1H), 4.98 - 4.89 (m, 1H), 4.56 (d, J = 6.0 Hz, 2H), 4.13
(dt, J = 13.2, 7.9 Hz, 1H), 3.90 (d, J = 15.0 Hz, 1H), 3.83 (dd, J = 15.1, 2.0 Hz,
1H), 3.13 (ddd, J = 13.2, 7.1, 2.9 Hz, 1H), 2.18 - 2.05 (m, 1H), 2.04 (s, 1H), 1.82
- 1.64 (m, 1H), 1.53 - 1.20 (m, 1H).
Example 13: Preparation of (6S,7R)-N-(2,4-difluorobenzyl)-6,12-dihydroxy-6-methyl-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
and (6R,7S)-N-(2,4-difluorobenzyl)-6,12-dihydroxy-6-methyl-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(14-1, 14-2):
[0315]

Synthesis of benzyl 3 -(((benzyloxy)carbonyl)amino)-4-hydroxyazepane-1-carboxylate
(14b):
[0316] To a solution of benzyl 3-amino-4-hydroxyazepane-1-carboxylate (1.1 g, 4.16 mmol)
and Na
2CO
3 (310 mg, 4.99 mmol) in dioxane (7 mL) and water (7 mL) was added Cbz-Cl (0.7 mL,
4.99 mmol) at 0 °C. The reaction mixture was warmed to room temperature and stirred
for 3 h. Ethyl acetate was added. The organic layer was separated, washed with brine,
dried (sodium sulfate), filtered and concentrated under reduced pressure. The residue
was purified by silica gel chromatography eluting with hexane/ethyl acetate to give
the title compound. MS (m/z) 399.26 [M+H]
+.
Synthesis of benzyl (S), and (R)-3-(((benzyloxy)carbonyl)amino)-4-oxoazepane-1-carboxylate
(14c-1 and 14c-2):
[0317] To a solution of benzyl 3-(((benzyloxy)carbonyl)amino)-4-hydroxyazepane-1-carboxylate
(
14b) (760 mg, 1.9 mmol) in 5 mL of DCM was added Dess Martin periodinane (1.2 g, 2.8
mmol). The reaction mixture was stirred for 30 minutes at room temperature. DCM was
added and the organic phase was washed twice with 10 % sodium thiosulphate solution,
twice with 0.5 M NaOH and with brine. The organic phase was dried and evaporated.
The residue was purified by SGC eluting with EtOAc/hexane to afford benzyl 3-(((benzyloxy)carbonyl)amino)-4-hydroxyazepane-1-carboxylate
(
14c). MS (m/z) 397.53 [M+H]+. Compound
14c was separated into individual enantiomers by preparative SFC chromatography on an
IA column using MeOH co-solvent to provide
14c-1 and
14c-2.
Synthesis of benzyl ((3S,4R), and (3R, 4S)-4-hydroxy-4-methylazepan-3-yl)carbamate
(14d-1, 14d-2):
[0318] To a flask was added methyl Grignard (1.02 mL, 3.05 mmol, [3 M in Et
2O]) at 0 °C. A solution of
14c-1 or
14c-2 (302 mg, 0.76 mmol) in 1 mL THF was added slowly while stirring. The reaction was
allowed to warm to room temperature and stirred overnight. The reaction was quenched
with NH
4Cl and extracted into ethyl acetate, washed with brine, dried with MgSO
4, filtered, and solvent was removed under vacuum to afford benzyl ((3S,4R)-4-hydroxy-4-methylazepan-3-yl)carbamate
or benzyl ((3R,4S)-4-hydroxy-4-methylazepan-3-yl)carbamate. MS (m/z) 413.50 [M+H]
+.
[0319] The residue was dissolved in absolute ethanol and was sparged under an argon atmosphere.
Palladium hydroxide (101 mg, 20% Pd weight) was added and the mixture was sparged
under a hydrogen atmosphere (1 atm, balloon). The mixture was stirred vigorously for
a weekend and sparged under an argon atmosphere. It was filtered through a pad of
Celite
®. The Celite
® was washed with absolute ethanol and the filtrate was concentrated
in vacuo to afford the title compounds. MS (m/z) 145.16 [M+H]
+.
Synthesis of (6S,7R), and (6R,7S)-N-(2,4-difluorobenzyl)-6,12-dihydroxy-6-methyl-111-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(14-1, 14-2):
[0320] The title compounds were prepared similarly to compound
12 using compounds
14d-1 and
14d-2. MS (m/z) 434.15 [M+H]
+.
1H NMR (400 MHz, DMSO-d6) δ 10.80 (s, 1H), 10.46 (t, J = 6.0 Hz, 1H), 8.34 (s, 1H),
7.41 (td, J = 8.7, 6.6 Hz, 1H), 7.25 (ddd, J = 11.7, 9.4, 2.6 Hz, 1H), 7.08 (td, J
= 8.6, 2.7 Hz, 1H), 4.99 (s, 1H), 4.56 (d, J = 5.9 Hz, 2H), 4.30 (s, 1H), 4.15 (dt,
J = 13.0, 8.8 Hz, 1H), 3.85 (dd, J = 15.2, 3.0 Hz, 1H), 3.68 (dd, J = 15.2, 1.7 Hz,
1H), 3.10 (dt, J = 13.0, 4.8 Hz, 1H), 1.81 (d, J = 7.2 Hz, 2H), 1.47 (d, J = 15.4
Hz, 1H), 1.35 (s, 3H), 1.23 (dt, J = 14.4, 6.5 Hz, 1H).
Example 14: Preparation of (6R,7S)-, and (6S, 7R)-6-fluoro-12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(15-1, 15-2):
[0321]

Synthesis of (7S)-, and (7R)-12-(benzyloxy)-1,6,11-trioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(15a-1, 15a-2):
[0322] 12-(Benzyloxy)-1,6,11-trioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(
10b) (350 mg) was separated into its individual enantiomers by preparative SFC chromatography
on an IA column using MeOH co-solvent to provide
15a-1 and
15a-2. MS (m/z) 526.00 [M+H]+.
Synthesis of (6S, 7S)-, and (6R,7R)-12-(benzyloxy)-6-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(15b-1, 15b-2):
[0323] To a solution of
15a-1 or
15a-2 (150 mg, 0.285 mmol)in 7 mL of methanol was added NaBH
4 (21.6 mg, 0.57 mmol) at 0 °C. The reaction was stirred for 30 minutes at room temperature.
The reaction was quenched with 1 N HCl and extracted with DCM. The organic phase was
dried over MgSO
4 and concentrated to dryness to afford the title compounds. MS (m/z) 528.26 [M+H]+.
Synthesis of (6R,7S)-, and (6S, 7R)-6-fluoro-12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(15-1, 15-2):
[0324] The title compounds were prepared similar to compound
13, using compounds
15b-1 and
15b-2. 15-1: MS (m/z) 440.22 [M+H]+.
1H NMR (400 MHz, DMSO-d6) δ 10.59 (s, 1H), 10.35 (t, J = 5.8 Hz, 1H), 8.58 (s, 1H),
7.28 - 7.15 (m, 2H), 5.12 - 4.78 (m, 2H), 4.65 - 4.50 (m, 2H), 4.18 - 4.06 (m, 1H),
3.89 - 3.80 (m, 2H), 3.12 (ddd, J = 13.2, 7.2, 2.9 Hz, 1H), 2.19 - 1.95 (m, 2H), 1.79
- 1.70 (m, 1H), 1.56 - 1.21 (m, 1H).
15-2: MS (m/z) 440.20 [M+H]
+.
1H NMR (400 MHz, DMSO-d6) δ 10.57 (s, 1H), 10.35 (t, J = 5.8 Hz, 1H), 8.58 (s, 1H),
7.28 - 7.15 (m, 2H), 5.12 - 4.81 (m, 2H), 4.65 - 4.50 (m, 2H), 4.12 (dt, J = 13.3,
8.1 Hz, 1H), 3.89 (d, J = 15.0 Hz, 1H), 3.86 - 3.77 (m, 1H), 3.12 (ddd, J = 13.1,
7.0, 2.9 Hz, 1H), 2.22 - 1.95 (m, 2H), 1.79 - 1.70 (m, 1H), 1.50 - 1.28 (m, 1H).
Example 15: Preparation of (7S)-, and (7R)-N-(2,4-difluorobenzyl)-6,6-difluoro-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(16-1, 16-2):
[0325]

Synthesis of (7S)-, and (7R)-12-(benzyloxy)-N-(2,4-difluorobenzyl)-1,6,11-trioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(16a-1, 16a-2):
[0326] 12-(Benzyloxy)-N-(2,4-difluorobenzyl)-1,6,11-trioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(
16a) was prepared similarly to compound
10b using methyl 3-(benzyloxy)-5-((2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate
(
16a). MS (m/z) 508.15[M+H]+. Compound
16a was separated into its individual enantiomers by preparative SFC chromatography on
an OD-H column using IPA-NH
3 co-solvent to provide
16a-1 and
16a-2.
Synthesis of (7S)-, and (7R)-N-(2,4-difluorobenzyl)-6,6-difluoro-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(16-1, 16-2):
[0327] The title compounds were prepared similarly to compounds
10-1 and
10-2 using
16a-1 and
16a-2. 16-1: MS (m/z) 440.20 [M+H]
+.
1H NMR (400 MHz, DMSO-d6) δ 10.64 (s, 1H), 10.24 (t, J = 6.0 Hz, 1H), 8.50 (s, 1H),
7.42 (td, J = 8.6, 6.6 Hz, 1H), 7.26 (ddd, J = 10.5, 9.4, 2.6 Hz, 1H), 7.07 (td, J
= 8.5, 7.6, 4.2 Hz, 1H), 5.24 (s, 1H), 4.56 (d, J = 5.8 Hz, 2H), 4.27 - 4.15 (m, 1H),
4.04 (d, J = 16.5 Hz, 1H), 3.92 - 3.83 (m, 1H), 3.19 (dd, J = 13.2, 6.8 Hz, 1H), 2.22
(s, 1H), 1.96 (d, J = 21.8 Hz, 2H), 1.71 - 1.54 (m, 1H).
16-2: MS (m/z) 440.27 [M+H]+.
1H NMR (400 MHz, DMSO-d6) δ 10.64 (s, 1H), 10.24 (t, J = 5.9 Hz, 1H), 8.50 (s, 1H),
7.42 (td, J = 8.7, 6.6 Hz, 1H), 7.31 - 7.20 (m, 1H), 7.07 (td, J = 8.4, 2.7 Hz, 1H),
5.24 (s, 1H), 4.56 (d, J = 5.9 Hz, 2H), 4.21 (q, J = 10.2, 9.7 Hz, 1H), 4.04 (d, J
= 15.8 Hz, 1H), 3.88 (dd, J = 15.4, 2.0 Hz, 1H), 3.18 (dd, J = 13.1, 6.7 Hz, 1H),
2.22 (s, 1H), 1.97 (d, J = 22.4 Hz, 2H), 1.62 (dd, J = 35.1, 14.3 Hz, 1H).
Example 16: Preparation of N-(2,4-difluorobenzyl)-6-fluoro-12-hydroxy-6-methyl-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(17-1a) and N-(2,4-difluorobenzyl)-12-hydroxy-6-methyl-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(17-1b, 17-2b):
[0328]

Synthesis of 12-(benzyloxy)-N-(2,4-difluorobenzyl)-6-fluoro-6-methyl-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(17a-1a, 17a-2a) and 12-(benzyloxy)-N-(2,4-difluorobenzyl)-6-methylene-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(17a-1b, 17a-2b):
[0329] The title compounds were prepared similarly to compound
13a using compounds
14e-1 and
14e-2. MS (m/z) 526.16 [M+H]+. Side products (
17a-1b, 17a-2b) were generated. MS (m/z) 506.13 [M+H]+.
Synthesis of N-(2,4-difluorobenzyl)-6-fluoro-12-hydroxy-6-methyl-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(17-1a) and N-(2,4-difluorobenzyl)-12-hydroxy-6-methyl-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(17-1b, 17-2b):
[0330] The mixture of products (
17a-1a and
17a-1b, 40 mg, ~0.07 mmol) or (
17a-2a and
17a-2b) from previous steps was dissolved in absolute ethanol (10 mL) and the solution sparged
under an argon atmosphere. Palladium hydroxide (20 %, 11 mg) was added and the mixture
was sparged under a hydrogen atmosphere (1 atm, balloon). The mixture was stirred
vigorously for 2h, sparged under an argon atmosphere, and filtered through a pad of
Celite
®. The Celite
® was washed with absolute ethanol and the filtrate was concentrated
in vacuo. The residue was purified by preparatory HPLC (MeCN/water with 0.1% TFA), and lyophilized
to afford the title compounds. For
17-1a:MS (m/z) 436.25 [M+H]
+.
1H NMR (400 MHz, DMSO-d6) δ 10.82 (s, 1H), 10.33 (t, J = 6.0 Hz, 1H), 8.65 (s, 1H),
7.42 (td, J = 8.7, 6.6 Hz, 1H), 7.26 (ddd, J = 10.6, 9.3, 2.6 Hz, 1H), 7.08 (td, J
= 8.6, 2.7 Hz, 1H), 4.81 (d, J = 11.5 Hz, 1H), 4.63 - 4.48 (m, 2H), 4.16 (q, J = 11.1
Hz, 1H), 3.92 (dd, J = 15.0, 2.5 Hz, 1H), 3.80 (d, J = 16.1 Hz, 1H), 3.16 (dd, J =
13.0, 7.8 Hz, 1H), 2.17 - 2.06 (m, 1H), 1.92 (dt, J = 13.7, 6.4 Hz, 1H), 1.73 (dt,
J = 19.6, 9.6 Hz, 1H), 1.49 - 1.16 (m, 4H). For
17-1b:MS (m/z) 418.28 [M+H]+.
1H NMR (400 MHz, DMSO-d6) δ 10.90 (s, 1H), 10.42 (t, J = 5.9 Hz, 1H), 8.63 (d, J =
18.6 Hz, 0H), 8.43 (s, 1H), 7.42 (td, J = 8.7, 6.6 Hz, 1H), 7.26 (ddd, J = 10.6, 9.3,
2.6 Hz, 1H), 7.13 - 7.03 (m, 1H), 4.69 (s, 1H), 4.63 - 4.48 (m, 2H), 4.22 - 4.09 (m,
1H), 3.94 (dd, J = 14.6, 2.8 Hz, 1H), 3.71 (dd, J = 14.4, 1.7 Hz, 1H), 3.14 (dd, J
= 12.9, 6.7 Hz, 1H), 2.11 - 1.99 (m, 1H), 1.91 (t, J = 7.8 Hz, 2H), 1.55 (m, 1H),
1.50 (m, 1H), 0.85 (d, J = 6.9 Hz, 3H). For
17-2b:MS (m/z) 418.24 [M+H]
+.
1H NMR (400 MHz, DMSO-d6) δ 10.90 (s, 1H), 10.42 (t, J = 6.0 Hz, 1H), 8.43 (s, 1H),
7.48 - 7.37 (m, 1H), 7.31 - 7.21 (m, 1H), 7.08 (t, J = 9.7 Hz, 1H), 4.69 (s, 1H),
4.56 (d, J = 5.1 Hz, 2H), 4.22 - 4.11 (m, 1H), 3.98 - 3.89 (m, 1H), 3.70 (d, J = 14.6
Hz, 1H), 3.14 (dd, J = 12.9, 6.3 Hz, 1H), 2.01 (m, 1H), 1.92 (m, 2H), 1.55 (m, 1H),
1.50 (m, 1H), 0.85 (d, J = 6.9 Hz, 3H).
Example 17: Preparation of 12-hydroxy-7-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(18):
[0331]

Synthesis of tert-butyl (E)-3-((tert-butylsulfinyl)imino)azepane-1-carboxylate (18a):
[0332] To a solution of
tert-butyl 3-oxoazepane-1-carboxylate (0.52 g, 2.44 mmol) and 2-methylpropane-2-sulfinamide
(0.35 g, 2.93 mmol) in THF (10 mL) was added titanium (IV) ethoxide (1.03 mL, 4.91
mmol) at room temperature. The resulting solution was stirred at room temperature
overnight.
[0333] The reaction mixture was diluted with ethyl acetate (10 mL), and quenched with aq.
NaHCO
3 (~5 mL). Celite
® was added to the mixture and the solid was filtered off, the filter cake was washed
with ethyl acetate (10 mL x 2). The combined washes were concentrated
in vacuo. The residue was purified by CombiFlash
® using EtOAc/Hexanes to afford the title compound. MS (
m/
z) 317.2 [M+H]
+
Synthesis of tert-butyl 3-((tert-butylsulfinyl)amino)-3-methylazepane-1-carboxylate (18b):
[0334] At 0 °C, to tert-butyl (E)-3-((
tert-butylsulfinyl)imino)azepane-1-carboxylate (0.15 g, 0.47 mmol) in DCM was added 3M
MeMgBr (0.95 mL) dropwise. The reaction mixture was warmed to room temperature and
stirred at room temperature overnight.
[0335] The reaction mixture was diluted with ethyl acetate and washed with saturated NH
4Cl and brine. The mixture was dried with MgSO
4, and the solvent was removed under vacuum. The residue was purified by Silica Gel
Column with ethyl acetate/hexane to afford the title compound. MS (
m/
z) 333.2 [M+H]
+
Synthesis of 3-methylazepan-3-amine (18c):
[0336] At room temperature, 4M HCl (0.07 mL) in dioxane was added to solution of
tert-butyl 3-(
tert-butylsulfinylamino)-3-methyl-azepane-1-carboxylate (
18b, 0.03 g, 0.1 mmol) in DCM (2 mL). After 2h, solvent was removed under vacuum, and
the unpurified material was used directly in the next step. MS (
m/
z) 129.2 [M+H]
+
Synthesis of 12-(benzyloxy)-7-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(18d):
[0337] To a mixture of 3-methylazepan-3-amine (
18c, 0.013 g, 0.1 mmol) and sodium bicarbonate (45.07 mg, 0.54 mmol) in MeOH (2mL) and
water (2 mL) was added methyl 3-benzyloxy-4-oxo-5-[(2,4,6-trifluorophenyl)methylcarbamoyl]pyran-2-carboxylate
(30 mg, 0.07 mmol) at room temperature. The mixture was stirred at 60 °C for 3 h.
The reaction mixture was diluted with ethyl acetate and washed with water and brine,
and dried with MgSO
4. Solvent was removed under vacuum and the residue was purified to afford the title
compound. MS (
m/
z) 526.2 [M+H]
+
Synthesis of 12-hydroxy-7-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(18):
[0338] 12-(Benzyloxy)-7-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(0.03 g, 0.06 mmol) was dissolved in toluene (2 mL) and TFA (2 mL) was added. The
reaction mixture was stirred at room temperature for 1 h. Solvent was removed under
vacuum and the residue was purified by HPLC to afford the title compound. MS (
m/
z) 436.1 [M+H]
+. 1H NMR (400 MHz, Chloroform-d) δ 10.46 (s, 1H), 8.57 (s, 1H), 6.74 - 6.62 (m, 2H),
4.69 (m, 1H), 4.47 (m, 1H), 4.30 - 4.14 (m, 1H), 3.65-3.77 (m, 3H), 3.40 (m, 1H),
3.09 (m, 1H), 2.15 - 1.7 (m, 7H)
Example 18: Preparation of (7S)-12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,3,4,6,7,11-hexahydro-2,7-methanopyrido[1,2-d][1,4,7]oxadiazonine-10-carboxamide
(19):
[0339]

[0340] (7S)-12-Hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,3,4,6,7,11-hexahydro-2,7-methanopyrido[1,2-d][1,4,7]oxadiazonine-10-carboxamide
(
19) was prepared similarly to 12-hydroxy-7-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(
18) using (S)-1,4-oxazepan-6-amine to replace 3-methylazepan-3-amine. 1H NMR (400 MHz,
DMSO-d6) δ 10.41 (t, J = 5.8 Hz, 1H), 8.51 (s, 1H), 7.35 - 6.97 (m, 2H), 4.71 (s,
1H), 4.57 (d, J = 5.7 Hz, 2H), 4.28 (ddd, J = 13.1, 9.4, 7.3 Hz, 1H), 4.11 (d, J =
13.9 Hz, 1H), 4.07 - 3.78 (m, 6H). MS (
m/
z) 514.2 [M+H]
+
Example 19: Preparation of (7R)-12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(20):
[0341]

[0342] (7R)-12-Hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,3,4,6,7,11-hexahydro-2,7-methanopyrido[1,2-d][1,4,7]oxadiazonine-10-carboxamide
(
20) was prepared similarly to 12-hydroxy-7-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyndo[1,2-a][1,4]diazonine-10-carboxamide
(
18) using (R)-1,4-oxazepan-6-amine to replace 3-methylazepan-3-amine.
1H NMR (400 MHz, DMSO-d6) δ 10.41 (s, 1H), 8.51 (s, 1H), 7.22 (dd, J = 9.2, 8.0 Hz,
2H), 4.71 (d, J = 3.1 Hz, 1H), 4.57 (d, J = 5.7 Hz, 2H), 4.27 (ddd, J = 12.9, 9.1,
7.1 Hz, 1H), 4.16 - 3.62 (m, 6H). MS (
m/
z) 514.2 [M+H]
+
Example 20: Preparation of N-(2,4-difluorobenzyl)-11-hydroxy-1,10-dioxo-1,3,4,5,6,10-hexahydro-2,6-ethanopyrido[1,2-a][1,4]diazocine-9-carboxamide
(23):
[0343]

Synthesis of diethyl 1-(azepan-4-yl)-3-(benzyloxy)-4-oxo-1,4-dihydropyridine-2,5-dicarboxylate
(23a):
[0344] A reactor was charged with tert-butyl 3-aminoazepane-1-carboxylate (588 mg, 3mmol),
NaHCO
3 (576 mg, 7 mmol) in EtOH/Water (9mL/6mL) and diethyl 3-(benzyloxy)-4-oxo-4H-pyran-2,5-dicarboxylate
(950 mg, 3 mmol) was added. The reaction mixture was heated to 50 °C overnight. The
reaction was cooled to room temperature, and extracted with Ethyl Acetate (100 mL).
The organic layer was concentrated under vacuum. The residue was used in the next
step without purification.
[0345] To the above residue in DCM (10 mL) was added 4N HCl in dioxane solution (3 mL).
After 2 h at room temperature, remove solvent under vacuum to provide the title compound,
which was used in the next step without purification. MS (
m/
z) 442.945 [M+H]
+.
Synthesis of ethyl 11-(benzyloxy)-1,10-dioxo-1,3,4,5,6,10-hexahydro-2,6-ethanopyrido[1,2-a][1,4]diazocine-9-carboxylate
(23b):
[0346] EtOH (20 mL) and DBU (2.2 g, 15 mmol) were added to the above residue. After heating
to 110 °C under microwave reactor for 1 h, the reaction mixture was cooled to room
temperature and extracted with Ethyl Acetate (100 mL). The organic layer was concentrated
under vacuum. The resulting residue was purified by silica gel chromatography to provide
the title compound. MS (
m/
z) 397.113 [M+H]
+.
Synthesis of 11-(benzyloxy)-1,10-dioxo-1,3,4,5,6,10-hexahydro-2,6-ethanopyrido[1,2-a][1,4]diazocine-9-carboxylic
acid (23c):
[0347] To the above residue (114 mg, 0.288 mmol) in MeOH (6 mL) was added 2N LiOH (1 mL)
at room temperature. After 2 h, the reaction was diluted with Ethyl Acetate (100 mL)
and 1N HCl (20 mL). The organic layer was dried, and concentrated under vacuum. The
resulting residue was used in the next step reaction without purification. MS (
m/
z) 369.131 [M+H]
+.
Synthesis of 11-(benzyloxy)-N-(2,4-difluorobenzyl)-1,10-dioxo-1,3,4,5,6,10-hexahydro-2,6-ethanopyrido[1,2-a][1,4]diazocine-9-carboxamide
(23d):
[0348] To the above residue (57 mg, 0.155 mmol) in DCM (5 mL), was added (2,4-difluorophenyl)methanamine
(27.4 mg, 0.17mmol), DIPEA (60 mg, 0.46 mmol) and HATU (60.2 mg, 0.186 mmol) at room
temperature. After 1 h, the reaction was diluted with Ethyl Acetate (100 mL) and washed
with brine. The organic layer was dried, and concentrated under vacuum. The resulting
residue was used in the next step. MS
(m/
z) 512.147 [M+H]
+.
Synthesis of 11-hydroxy-1,10-dioxo-N-(2,4-difluorobenzyl)-1,3,4,5,6,10-hexahydro-2,6-ethanopyrido[1,2-a][1,4]diazocine-9-carboxamide (23):
[0349] To the solution of 11-(benzyloxy)-1,10-dioxo-N-(2,4-difluorobenzyl)-1,3,4,5,6,10-hexahydro-2,6-ethanopyrido[1,2-a][1,4]diazocine-9-carboxamide
(163 mg) in DCM (2 mL) , was added TFA (1 mL). After 4 h, the solvent was removed.
The resulting residue was used purified by RP-HPLC eluting with ACN/water (0.1% TFA)
to provide title compound as TFA salt. MS (
m/
z) 404.154 [M+H]
+.
1H NMR (400 MHz, DMSO-d6) δ 10.41 (t, J = 5.9 Hz, 1H), 8.33 (s, 1H), 7.39 (dd, J =
8.6, 6.6 Hz, 2H), 7.22 (ddd, J = 10.7, 9.3, 2.6 Hz, 1H), 7.07 - 7.01 (m, 1H), 4.99
(d, J = 11.6 Hz, 1H), 4.59 - 4.46 (m, 2H), 4.30 - 4.19 (m, 1H), 3.15 - 3.07 (m, 1H),
2.42 - 2.15 (m, 3H), 2.07 - 1.91 (m, 2H), 1.73 (d, J = 46.6 Hz, 3H).
Example 21: Preparation of racemic- and (R)- or (S)-11-hydroxy-1,10-dioxo-N-(2,4,6-trifluorobenzyl)-1,3,4,5,6,10-hexahydro-2,6-ethanopyrido[1,2-a][1,4]diazocine-9-carboxamide
(24 and 24-1):
[0350]

Synthesis of racemic-11-hydroxy-1,10-dioxo-N-(2,4,6-trifluorobenzyl)-1,3,4,5,6,10-hexahydro-2,6-ethanopyrido[1,2-a][1,4]diazocine-9-carboxamide
(24):
[0351] Racemic 11-hydroxy-1,10-dioxo-N-(2,4,6-trifluorobenzyl)-1,3,4,5,6,10-hexahydro-2,6-ethanopyrido[1,2-a][1,4]diazocine-9-carboxamide
(
24) was synthesized from 11-(benzyloxy)-1,10-dioxo-1,3,4,5,6,10-hexahydro-2,6-ethanopyrido[1,2-a][1,4]diazocine-9-carboxylic
acid and (2,4,6-trifluorophenyl)methanamine similarly to the synthesis of compound
5. MS (
m/
z) 422.089 [M+H]
+.
1H NMR (400 MHz, DMSO-d6) δ 10.41 (t, J = 5.9 Hz, 1H), 8.33 (s, 1H), 7.39 (dd, J =
8.6, 6.6 Hz, 2H), 7.22 (ddd, J = 10.7, 9.3, 2.6 Hz, 1H), 7.07 - 7.01 (m, 1H), 4.99
(d, J = 11.6 Hz, 1H), 4.59 - 4.46 (m, 2H), 4.30 - 4.19 (m, 1H), 3.15 - 3.07 (m, 1H),
2.42 - 2.15 (m, 2H), 2.07 - 1.91 (m, 2H), 1.73 (d, J = 46.6 Hz, 2H).
Synthesis of (R )- or (S)-11-hydroxy-1,10-dioxo-N-(2,4,6-trifluorobenzyl)-1,3,4,5,6,10-hexahydro-2,6-ethanopyrido[12-a][1,4]diazocine-9-carboxamide
(24-1):
[0352] (R)- or (S)-11-(Benzyloxy)-1,10-dioxo-N-(2,4,6-trifluorobenzyl)-1,3,4,5,6,10-hexahydro-2,6-ethanopyrido[1,2-a][1,4]diazocine-9-carboxamide
peak 1 (
24a-1) was separated from racemic-11-(benzyloxy)-1,10-dioxo-N-(2,4,6-trifluorobenzyl)-1,3,4,5,6,10-hexahydro-2,6-ethanopyrido[1,2-a][1,4]diazocine-9-carboxamide
(
24a) by chiral HPLC separation (SFC chromatography on an IB 4.6X100mm 5mic column using
MeOH(20) co-solvent). The separated peak 1 was used to make 11-hydroxy-1,10-dioxo-N-(2,4,6-trifluorobenzyl)-1,3,4,5,6,10-hexahydro-2,6-ethanopyndo[1,2-a][1,4]diazocine-9-carboxamide
(
24-1). MS (
m/
z) 422.124 [M+H]
+.
1H NMR (400 MHz, DMSO-d6) δ 10.45 (t, J = 5.8 Hz, 1H), 8.31 (s, 1H), 7.28 - 7.10 (m,
2H), 4.97 (d, J = 11.3 Hz, 2H), 4.61 (dd, J = 14.5, 6.1 Hz, 1H), 4.48 (dd, J = 14.6,
5.5 Hz, 1H), 4.24 (d, J = 13.0 Hz, 2H), 3.11 (dd, J = 13.5, 8.3 Hz, 1H), 2.37 - 2.21
(m, 2H), 2.00 (d, J = 40.1 Hz, 2H), 1.70 (d, J = 31.2 Hz, 2H).
Example 22: Preparation of racemic and (7R)- and (7S)-N-(2,4-difluorobenzyl)-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(25, 25-1, 25-2):
[0353]

Synthesis of 12-(benzyloxy)-N-(2,4-difluorobenzyl)-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(25d):
[0354] 12-(Benzyloxy)-N-(2,4-difluorobenzyl)-1,1-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(
25d) was synthesized from diethyl 3-(benzyloxy)-4-oxo-4H-pyran-2,5-dicarboxylate and
tert-butyl 3-aminoazepane-1-carboxylate as starting material following a similar procedure
as compound
24a. MS
(m/
z) 494.181 [M+H]
+.
Synthesis of racemic N-(2,4-difluorobenzyl)-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(25):
[0355] To a solution of 12-(benzyloxy)-N-(2,4-difluorobenzyl)-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(
25d) (5.5 mg) in toluene (0.2 mL), was added TFA (0.2 mL) at room temperature. After
4 h, the solvent was removed. The resulting residue was purified by RP-HPLC eluting
with ACN/water (0.1% TFA) to provide title compound as TFA salt. MS (
m/
z) 404.134 [M+H]
+.
1H NMR (400 MHz, DMSO-d6) δ 10.61 (s, 1H), 10.38 (t, J = 6.0 Hz, 1H), 8.47 (s, 1H),
7.38 (td, J = 8.7, 6.6 Hz, 1H), 7.22 (ddd, J = 10.6, 9.3, 2.6 Hz, 1H), 7.04 (td, J
= 8.6, 2.6 Hz, 1H), 4.75 (dd, J = 5.9, 2.8 Hz, 1H), 4.53 (d, J = 5.9 Hz, 2H), 4.12
(d, J = 13.3 Hz, 1H), 3.90 - 3.84 (m, 1H), 3.65 (dd, J = 14.7, 1.9 Hz, 1H), 3.07 (td,
J = 6.6, 3.6 Hz, 1H), 2.02 - 1.94 (m, 1H), 1.89 - 1.74 (m, 3H), 1.62 (d, J = 7.6 Hz,
1H), 1.12 (d, J = 12.1 Hz, 1H).
Synthesis of (7R)-12-(benzyloxy)-N-(2,4-difluorobenzyl)-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
and (7S)-12-(benzyloxy)-N-(2,4-difluorobenzyl)-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(25d-1, 25d-2):
[0356] (7R)-12-(Benzyloxy)-N-(2,4-difluorobenzyl)-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(
25d-1) as peak 1 and (7S)-12-(benzyloxy)-N-(2,4-difluorobenzyl)-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(
25d-2) as peak 2 were separated from racemic of 12-(benzyloxy)-N-(2,4-difluorobenzyl)-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(
25d) by chiral HPLC separation (SFC chromatography on an IB 4.6X100mm 5mic column using
MeOH (20) as co-solvent). The peak 1 structure was confirmed by the synthesis starting
from (R)-azepan-3-amine.
Synthesis of (7R)-N-(2,4-difluorobenzyl)-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(25-1) and (7S)-N-(2,4-difluorobenzyl)-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(25-2):
[0357] (7R)-N-(2,4-Difluorobenzyl)-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(
25-1) and (7S)-N-(2,4-difluorobenzyl)-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(
25-2) were synthesized from peak 1 and peak 2 respectively, following similar reaction
conditions as those used to prepare compound
25. Compound
25-1: MS
(m/
z) 404.186 [M+H]
+.
1H NMR (400 MHz, DMSO-d6) δ 10.59 (s, 1H), 10.38 (t, J = 5.9 Hz, 1H), 8.47 (s, 1H),
7.38 (td, J = 8.7, 6.6 Hz, 1H), 7.22 (ddd, J = 10.6, 9.3, 2.6 Hz, 1H), 7.04 (tdd,
J = 8.6, 2.6, 1.1 Hz, 1H), 4.75 (d, J = 5.4 Hz, 1H), 4.53 (d, J = 5.9 Hz, 2H), 4.17
- 4.05 (m, 1H), 3.86 (d, J = 14.6 Hz, 1H), 3.65 (dd, J = 14.7, 1.9 Hz, 1H), 3.06 (ddd,
J = 13.1, 6.9, 3.6 Hz, 1H), 1.99 (s, 1H), 1.89 - 1.74 (m, 3H), 1.62 (d, J = 8.0 Hz,
1H). Compound
25-2: MS (
m/
z) 404.165 [M+H]
+.
1H NMR (400 MHz, DMSO-d6) δ 10.61 (s, 1H), 10.38 (t, J = 5.9 Hz, 1H), 8.47 (s, 1H),
7.38 (td, J = 8.7, 6.6 Hz, 1H), 7.22 (ddd, J = 10.5, 9.3, 2.6 Hz, 1H), 7.09 - 6.99
(m, 1H), 4.75 (s, 1H), 4.53 (d, J = 5.9 Hz, 2H), 4.12 (d, J = 13.3 Hz, 1H), 3.86 (d,
J = 14.6 Hz, 1H), 3.69 - 3.60 (m, 1H), 3.06 (ddd, J = 13.1, 6.8, 3.6 Hz, 1H), 1.99
(s, 1H), 1.83 (d, J = 13.3 Hz, 3H), 1.67 - 1.60 (m, 1H).
Example 23: Preparation of racemic-12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(26), (7R)-12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(26-1) and (7S)-12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(26-2):
[0358]

Synthesis of 12-Hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(26):
[0359] 12-(Benzyloxy)-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxylic
acid (57 mg, 0.155 mmol) was dissolved in DCM (2 mL) with (2,4,6-trifluorophenyl)methanamine
(27 mg, 0.17 mmol) and triethylamine (60 mg, 0.464 mmol). HATU (60 mg, 0.186 mmol)
was added and the mixture was stirred at room temperature. After overnight reaction,
the reaction was concentrated to dryness, purified by silicon gel chromatography to
obtain compound 12-(benzyloxy)-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(
26a) MS
(m/
z) 512.06 [M+H]
+.
[0360] Compound 12-(benzyloxy)-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(
26a) (7 mg, 0.014 mmol) was dissloved in Tolune (1 mL), then followed by the addition
of TFA (1 mL). The resulting mixture was stirred at rt for overnight. The solvent
was removed under vacuo an the residue was purifed by HPLC to obtain the title compound
(
26). MS
(m/
z) 422.091 [M+H]
+.
1H NMR (400 MHz, DMSO-d6) δ 10.39 (t, J = 5.8 Hz, 1H), 8.45 (s, 1H), 7.24 - 7.11 (m,
2H), 4.72 (dd, J = 5.9, 2.9 Hz, 1H), 4.54 (dd, J = 6.0, 2.4 Hz, 2H), 4.11 (d, J =
13.3 Hz, 1H), 3.88 - 3.79 (m, 1H), 3.64 (dd, J = 14.7, 1.9 Hz, 1H), 3.05 (dq, J =
9.5, 3.4 Hz, 1H), 2.06 - 1.91 (m, 1H), 1.89 - 1.74 (m, 3H), 1.61 (d, J = 7.7 Hz, 1H),
1.11 (d, J = 12.7 Hz, 1H).
Synthesis of (7S)-12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(26-2) and (7R)-12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(26-1):
[0361] Racemic 12-(benzyloxy)-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(
26a) was separated by chiral HPLC separation (SFC chromatography on an IB 4.6X100mm 5mic
column using MeOH(20) as co-solvent) to obtain compounds (7R)-12-(Benzyloxy)-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(
26a-1) and (7S)-12-(benzyloxy)-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(
26a-2)
[0362] Compound (7S)-12-(benzyloxy)-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(
26a-2) (20 mg, 0.039 mmol) was dissloved in Tolune (1 mL), then followed by the addition
of TFA (1 mL). The resulting mixture was stireed at rt for overnight. The solvent
was removed under vacuo an the residue was purifed by HPLC to obtain the title compound
(
26-2). (MS
(m/
z) 422.123 [M+H]
+.
1H NMR (400 MHz, DMSO-d6) δ 10.59 (s, 1H), 10.39 (d, J = 5.9 Hz, 1H), 8.45 (s, 1H),
7.18 (t, J = 8.6 Hz, 2H), 4.72 (s, 1H), 4.59 - 4.48 (m, 2H), 4.11 (d, J = 13.2 Hz,
1H), 3.85 (d, J = 14.6 Hz, 1H), 3.69 - 3.59 (m, 1H), 3.05 (ddd, J = 11.3, 6.7, 3.6
Hz, 1H), 1.97 (m, 1H), 1.87 - 1.71 (m, 3H), 1.67 - 1.55 (m, 1H), 1.10 (m, 1H).
[0363] Compound (7R)-12-(benzyloxy)-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(
26a-1) ((20 mg, 0.039 mmol) was dissloved in Tolune (1 mL), then followed by the addition
of TFA (1 mL). The resulting mixture was stireed at rt for overnight. The solvent
was removed under vacuo an the residue was purifed by HPLC to obtain the title compound
(
26-1). MS
(m/
z) 422.116 [M+H]
+.
1H NMR (400 MHz, DMSO-d6) δ 10.58 (s, 1H), 10.39 (t, J = 5.8 Hz, 1H), 8.45 (s, 1H),
7.18 (dd, J = 9.2, 8.0 Hz, 2H), 4.73 (s, 1H), 4.58 - 4.49 (m, 2H), 4.11 (d, J = 13.3
Hz, 1H), 3.85 (d, J = 14.6 Hz, 1H), 3.65 (d, J = 14.2 Hz, 1H), 3.10 - 3.00 (m, 1H),
1.96 (m, 1H), 1.82 (d, J = 12.2 Hz, 3H), 1.61 (d, J = 7.4 Hz, 1H), 1.18 - 1.05 (m,
1H).
Example 24: Preparation of N-(2,4-difluorobenzyl)-7-hydroxy-6,8,15-trioxo-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]pyrido[1,2-a][1,4]diazonine-9-carboxamide
(27):
[0364]

Synthesis of 3-amino-1,3,4,5-tetrahydro-2H-benzo[b]azepin-2-one TFA salt (27a):
[0365] To the solution of
tert-butyl (2-oxo-2,3,4,5-tetrahydro-1H-benzo[b]azepin-3-yl)carbamate (55 mg, 0.02mmol)
in DCM (3mL) was added TFA (1mL) at room temperature. After 4 h, solvent and excess
TFA were removed to provide 3-amino-1,3,4,5-tetrahydro-2H-benzo[b]azepin-2-one. MS
(m/
z) 276.676 [M+H]
+.
Synthesis of 7-(benzyloxy)-N-(2,4-difluorobenzyl)-6,8,15-trioxo-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]pyrido[1,2-a][1,4]diazonine-9-carboxamide
(27b):
[0366] 7-(Benzyloxy)-N-(2,4-difluorobenzyl)-6,8,15-trioxo-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]pyrido[1,2-a][1,4]diazonine-9-carboxamide
was prepared from 3-amino-1,3,4,5-tetrahydro-2H-benzo[b]azepin-2-one TFA salt (45
mg, 0.163 mmol) and methyl 3-(benzyloxy)-5-((2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate
(70mg, 0.163mmol) followed the similar procedure as compound
25. MS (
m/
z) 555.034 [M+H]
+.
Synthesis of N-(2,4-difluorobenzyl)-7-hydroxy-6,8,15-trioxo-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]pyrido[1,2-a][1,4]diazonine-9-carboxamide
(27):
[0367] N-(2,4-difluorobenzyl)-7-hydroxy-6,8,15-trioxo-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]pyrido[1,2-a][1,4]diazonine-9-carboxamide
(
27) was prepared followed by same procedure as compound
26, starting from 7-(benzyloxy)-N-(2,4-difluorobenzyl)-6,8,15-trioxo-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]pyrido[1,2-a][1,4]diazonine-9-carboxamide
(11mg). MS
(m/
z) 465.05 [M+H]
+.
1H NMR (400 MHz, DMSO-d6) δ 10.25 (t, J = 5.9 Hz, 1H), 8.61 (s, 1H), 7.42 (d, J = 7.1
Hz, 1H), 7.29 (ddd, J = 12.1, 9.4, 2.8 Hz, 1H), 7.25 - 7.18 (m, 2H), 7.14 - 7.01 (m,
3H), 5.74 (s, 2H), 5.45 (s, 1H), 4.54 (d, J = 5.8 Hz, 1H), 3.68 (s, 2H), 3.64 (d,
J = 2.8 Hz, 1H).
Example 25: Preparation of (7S)-N-(2,4-difluorobenzyl)-12-hydroxy-1,11-dioxo-1,3,4,6,7,11-hexahydro-2,7-methanopyrido[1,2-d][1,4,7]oxadiazonine-10-carboxamide
(28):
[0368]

Synthesis of (7S)-12-(benzyloxy)-N-(2,4-difluorobenzyl)-1,11-dioxo-1,3,4,6,7,11-hexahydro-2,7-methanopyrido[1,2-d][1,4,7]oxadiazonine-10-carboxamide
(28a):
[0369] To the solution of 1,4-oxazepan-6-amine (18.9 mg, 0.16 mmol) in MeOH (6 mL) and water
(1 mL), was added sodium bicarbonate (109.6 mg, 1.3 mmol) and methyl 3-(benzyloxy)-5-((2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate
(70 mg, 0.163 mmol). The reaction mixture was heated to 50 °C overnight. The reaction
was cooled to room temperature, and extracted with Ethyl Acetate (100 mL). The organic
layer was concentrated under vacuum. The residue was used in the next step without
purification. MS
(m/
z) 496.016 [M+H]
+.
Synthesis of (7S)-N-(2,4-difluorobenzyl)-12-hydroxy-1,11-dioxo-1,3,4,6,7,11-hexahydro-2,7-methanopyrido[1,2-d][1,4,7]oxadiazonine-10-carboxamide
(28):
[0370] To the solution of (7S)-12-(benzyloxy)-N-(2,4-difluorobenzyl)-1,11-dioxo-1,3,4,6,7,11-hexahydro-2,7-methanopyrido[1,2-d][1,4,7]oxadiazonine-10-carboxamide
(
28a) from the above reaction, was added Toluene (1 mL) and TFA (1 mL). After 4 h at room
temperature, solvent and excess TFA were removed under vacuum. The residue was dissolved
in DMF and subject to prep. HPLC purification to provide the title compound. MS (
m/
z) 406.83 [M+H]
+.
1H NMR (400 MHz, DMSO-d6) δ 10.36 (t, J = 5.9 Hz, 1H), 8.50 (s, 1H), 7.39 (td, J =
8.7, 6.6 Hz, 1H), 7.27 - 7.20 (m, 1H), 7.05 (td, J = 7.6, 6.7, 4.0 Hz, 1H), 5.73 (s,
2H), 4.54 (d, J = 5.9 Hz, 2H), 4.34 - 4.23 (m, 1H), 4.10 (d, J = 14.3 Hz, 2H), 4.00
- 3.82 (m, 4H).
Example 26: Preparation of (7R)-N-(2,4-difluorobenzyl)-12-hydroxy-1,11-dioxo-1,3,4,6,7,11-hexahydro-2,7-methanopyrido[1,2-d][1,4,7]oxadiazonine-10-carboxamide
(29):
[0371]

[0372] (7R)-N-(2,4-Difluorobenzyl)-12-hydroxy-1,11-dioxo-1,3,4,6,7,11-hexahydro-2,7-methanopyrido[1,2-d][1,4,7]oxadiazonine-10-carboxamide
(
29) was synthesized from (R)-1,4-oxazepan-6-amine (18.9 mg, 0.163 mmol) and methyl 3-(benzyloxy)-5-((2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate
(70 mg, 0.163 mmol) followed the similar procedure as compound (
28). MS (
m/
z) 406.136 [M+H]
+.
1H NMR (400 MHz, DMSO-d6) δ 10.36 (t, J = 5.9 Hz, 1H), 8.51 (s, 1H), 7.42 - 7.37 (m,
1H), 7.21 (dd, J = 9.9, 2.5 Hz, 1H), 7.07 - 7.02 (m, 1H), 4.70 (s, 1H), 4.54 (d, J
= 5.9 Hz, 2H), 4.30 - 4.23 (m, 1H), 4.09 (d, J = 5.8 Hz, 1H), 4.00 (d, J = 12.0 Hz,
1H), 3.89 (t, J = 8.9 Hz, 3H), 3.66 (d, J = 10.0 Hz, 2H).
Example 27: Preparation of N-(2,4-difluorobenzyl)-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4,7]triazonine-10-carboxamide
(30):
[0373]

[0374] N-(2,4-Difluorobenzyl)-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4,7]triazonine-10-carboxamide
(
30) was synthesized from 1,4-diazepan-6-amine (75.1 mg, 0.652 mmol) and methyl 3-(benzyloxy)-5-((2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate
(140 mg, 0.326 mmol) followed a similar procedure as compound
28. MS
(m/
z) 405.183 [M+H]
+.
1H NMR (400 MHz, DMSO-d6) δ 10.70 (s, 1H), 10.37 (s, 1H), 8.52 (s, 1H), 7.42 - 7.34
(m, 1H), 7.22 (s, 1H), 7.05 (d, J = 2.6 Hz, 1H), 4.72 (s, 1H), 4.54 (d, J = 5.7 Hz,
2H), 4.16 (d, J = 12.8 Hz, 2H), 3.92 (d, J = 14.8 Hz, 2H), 3.72 (d, J = 15.0 Hz, 2H),
3.15 (s, 2H).
Example 28: Preparation of 5-acetyl-N-(2,4-difluorobenzyl)-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4,7]triazonine-10-carboxamide
(31):
[0375]

Synthesis of 5-acetyl-12-(benzyloxy)-N-(2,4-difluorobenzyl)-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4,7]triazonine-10-carboxamide (31):
[0376] To the solution of 12-(benzyloxy)-N-(2,4-difluorobenzyl)-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4,7]triazonine-10-carboxamide
(
30a, 26 mg, 0.053 mmol) in DCM (5 mL) was added DIPEA (27.2 mg, 0.21 mmol) and Acetyl
chloride (6.2 mg, 0.079 mmol) under ice-water bath cooling. After stirring for 4 h,
the reaction was extracted with Ethyl Acetate (100 mL). The organic layer was concentrated
under vacuum. The residue was used in the next step without purification. MS
(m/
z) 537.013 [M+H]
+.
[0377] 5-Acetyl-N-(2,4-difluorobenzyl)-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4,7]triazonine-10-carboxamide
(
31) was synthesized from 5-acetyl-12-(benzyloxy)-N-(2,4-difluorobenzyl)-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4,7]triazonine-10-carboxamide
(
31a) following similar debenzylation conditions as those used to prepare compound
30. MS (
m/
z) 447.159 [M+H]
+.
1H NMR (400 MHz, DMSO-d6) δ 10.36 (t, J = 5.9 Hz, 1H), 8.59 (d, J = 19.5 Hz, 1H), 7.39
(td, J = 8.7, 6.6 Hz, 1H), 7.22 (ddd, J = 10.6, 9.4, 2.7 Hz, 1H), 7.05 (ddt, J = 10.0,
7.4, 1.3 Hz, 1H), 5.73 (s, 2H), 4.54 (d, J = 6.0 Hz, 2H), 4.42 - 4.32 (m, 1H), 3.97
- 3.88 (m, 2H), 3.78 (d, J = 15.1 Hz, 2H), 3.20 - 3.15 (m, 1H), 1.86 (s, 3H).
Example 29: Preparation of N-(2,4-difluorobenzyl)-12-hydroxy-5-(methylsulfonyl)-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4,7]triazonine-10-carboxamide
(32):
[0378]

[0379] N-(2,4-Difluorobenzyl)-12-hydroxy-5-(methylsulfonyl)-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4,7]triazonine-10-carboxamide
(
32) was synthesized from 12-(benzyloxy)-N-(2,4-difluorobenzyl)-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4,7]triazonine-10-carboxamide
(26 mg, 0.053 mmol) following the same procedure as used to prepare compound
31, and using methanesulfonyl chloride (9 mg, 0.079 mmol). MS
(m/
z) 483.083 [M+H]
+.
1H NMR (400 MHz, DMSO-d6) δ 10.36 (t, J = 6.0 Hz, 1H), 8.56 (s, 1H), 7.38 (dd, J =
8.7, 6.7 Hz, 1H), 7.22 (ddd, J = 10.5, 9.3, 2.6 Hz, 1H), 7.14 - 6.96 (m, 1H), 4.54
(d, J = 5.9 Hz, 2H), 4.21 (dd, J = 6.6, 3.3 Hz, 1H), 3.98 (s, 2H), 3.90 - 3.75 (m,
4H), 3.45 (d, J = 15.0 Hz, 1H), 3.29 (d, J = 9.2 Hz, 1H), 3.23 - 3.10 (m, 1H), 2.88
(s, 3H).
Example 30: Preparation of N-(2,4-difluorobenzyl)-12-hydroxy-5-methyl-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4,7]triazonine-10-carboxamide (33):
[0380]

Synthesis of 12-(benzyloxy)-N-(2,4-difluorobenzyl)-5-methyl-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4,7]triazonine-10-carboxamide
(33):
[0381] To the solution of 12-(benzyloxy)-N-(2,4-difluorobenzyl)-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4,7]triazonine-10-carboxamide
(24 mg, 0.049 mmol) in DMF (1.5 mL) was added DIPEA (25.1 mg, 0.194 mmol) and MeI
(10.3 mg, 0.073 mmol) at room temperature. After stirring for 4 h, the reaction was
extracted with Ethyl Acetate (100 mL). The organic layer was concentrated under vacuum.
The residue was used in the next step without purification. MS
(m/
z) 509.11 [M+H]
+.
[0382] N-(2,4-Difluorobenzyl)-12-hydroxy-5-methyl-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4,7]triazonine-10-carboxamide
(
33) was synthesized from 12-(benzyloxy)-N-(2,4-difluorobenzyl)-5-methyl-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4,7]triazonine-10-carboxamide
(
33a) follow the same debenzylation conditions as those used to prepare compound
30. MS
(m/
z) 419.2 [M+H]
+.
1H NMR (400 MHz, DMSO-d6) δ 8.60 - 8.18 (m, 2H), 7.40 (td, J = 8.6, 6.6 Hz, 1H), 7.23
(td, J = 9.9, 2.6 Hz, 1H), 7.05 (td, J = 8.5, 2.5 Hz, 1H), 4.54 (d, J = 5.9 Hz, 2H),
4.17 (dt, J = 13.1, 8.1 Hz, 1H), 3.89 - 3.77 (m, 3H), 3.71 - 3.60 (m, 1H), 3.28 (d,
J = 7.3 Hz, 3H), 2.78 (s, 3H), 2.27 (s, 1H).
Example 31: Preparation of N-(2,4-difluorobenzyl)-12-hydroxy-5-isopropyl-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4,7]triazonine-10-carboxamide (34):
[0383]

[0384] N-(2,4-Difluorobenzyl)-12-hydroxy-5-isopropyl-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4,7]triazonine-10-carboxamide
(
34) was synthesized from 12-(benzyloxy)-N-(2,4-difluorobenzyl)-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4,7]triazonine-10-carboxamide
(24 mg, 0.049 mmol) following a similar procedure as that used to prepare compound
33, using 2-iodopropane (12.38 mg, 0.073 mmol). MS
(m/
z) 447.2 [M+H]
+.
1H NMR (400 MHz, DMSO-d6) δ 10.43 (s, 1H), 10.40 - 10.30 (m, 1H), 8.58 (d, J = 17.2
Hz, 1H), 8.50 (s, 1H), 7.81 (d, J = 12.3 Hz, 1H), 7.38 (dd, J = 9.0, 6.8 Hz, 2H),
7.22 (ddd, J = 10.7, 9.3, 2.6 Hz, 2H), 7.05 (td, J = 8.5, 2.5 Hz, 2H), 4.53 (d, J
= 5.7 Hz, 5H), 4.26 (s, 2H), 4.08 (s, 3H), 3.97 - 3.80 (m, 3H), 3.04 (s, 4H), 2.71
(s, 2H), 0.83 (s, 3H), 0.66 (s, 3H).
Example 32: Preparation of (7R)-N-(3-chloro-2,4-difluorobenzyl)-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(35):
[0385]

[0386] (7R)-N-(3-Chloro-2,4-difluorobenzyl)-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(
35) was synthesized from ethyl 3-(benzyloxy)-5-((3-chloro-2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate
(170 mg, 0.356 mmol) and (R)-azepan-3-amine (48.7 mg, 0.427 mmol) following the same
procedure as that used to prepare compound
28. MS
(m/
z) 438.1 [M+H]
+.
1H NMR (400 MHz, DMSO-d6) δ 10.42 (t, J = 6.0 Hz, 1H), 8.47 (s, 1H), 7.37 (td, J =
8.4, 6.2 Hz, 1H), 7.27 (td, J = 8.8, 1.6 Hz, 1H), 4.78 - 4.70 (m, 1H), 4.57 (d, J
= 5.9 Hz, 2H), 4.16 - 4.08 (m, 2H), 3.86 (d, J = 14.9 Hz, 1H), 3.65 (dd, J = 14.7,
1.8 Hz, 1H), 3.06 (ddd, J = 13.2, 6.9, 3.5 Hz, 1H), 1.98 (dd, J = 7.5, 4.4 Hz, 1H),
1.90 - 1.70 (m, 3H), 1.62 (d, J = 7.5 Hz, 1H), 1.12 (d, J = 12.7 Hz, 1H).
Example 33: Preparation of N-(2,4-difluorobenzyl)-7-hydroxy-6,8-dioxo-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]pyrido[1,2-a]
[1,4]diazonine-9-carboxamide (36):
[0387]

Synthesis of tert-butyl (2,3,4,5-tetrahydro-1H-benzo[b]azepin-3-yl)carbamate (36b):
[0388] To the solution of
tert-butyl (2-oxo-2,3,4,5-tetrahydro-1H-benzo[b]azepin-3-yl)carbamate (
36a) (300 mg, 1.086 mmol) in THF (5 mL) was added BH
3-THF solution (6 mL, IN, 6 mmol) at room temperature. After stirring overnight, the
reaction was quenched by adding MeOH and sodium bicarbonate water solution. The resulting
mixture was extracted with Ethyl Acetate (100 mL). The organic layer was concentrated
under vacuum. The residue was purified by silica gel chromatography to provide
tert-butyl (2,3,4,5-tetrahydro-1H-benzo[b]azepin-3-yl)carbamate. MS
(m/
z) 262.897 [M+H]
+.
Synthesis of 2,3,4,5-tetrahydro-1H-benzo[b]azepin-3-amine (36c):
[0389] To the solution of
tert-butyl (2,3,4,5-tetrahydro-1H-benzo[b]azepin-3-yl)carbamate (36b) (13 mg, 0.05 mmol)
in DCM (1 mL), was added TFA (1 mL) at room temperature. After 2 h, the solvent and
excess TFA were removed. The residue was used in the next step without purification.
MS
(m/
z) 162.952 [M+H]
+.
Synthesis of N-(2,4-difluorobenzyl)-7-hydroxy-6,8-dioxo-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]pyrido[1,2-a][1,4]diazonine-9-carboxamide
(36):
[0390] N-(2,4-Difluorobenzyl)-7-hydroxy-6,8-dioxo-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]pyrido[1,2-a][1,4]diazonine-9-carboxamide
(
36) was synthesized from methyl 3-(benzyloxy)-5-((2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate
(30 mg, 0.07 mmol) and 2,3,4,5-tetrahydro-1H-benzo[b]azepin-3-amine follow the same
procedure as that used to prepare compound
28. MS
(m/
z) 452.152 [M+H]
+.
1H NMR (400 MHz, DMSO-d6) δ 10.34 (t, J = 5.9 Hz, 1H), 8.59 (s, 1H), 7.41 (s, 1H),
7.36 - 7.16 (m, 5H), 7.05 (tdd, J = 8.5, 2.7, 1.1 Hz, 1H), 4.89 (s, 1H), 4.55 (d,
J = 6.0 Hz, 2H), 4.18 (s, 1H), 3.74 (d, J = 2.1 Hz, 1H), 2.83 - 2.67 (m, 2H), 2.24
(s, 1H), 2.10 (s, 1H).
Example 34: Preparation of (12R)- and (12S)-N-(2,4-difluorobenzyl)-7-hydroxy-6,8-dioxo-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]pyrido[1,2-a][1,4]diazonine-9-carboxamide
(37-1, 37-2):
[0391]

[0392] (12R)- and (12S)-N-(2,4-Difluorobenzyl)-7-hydroxy-6,8-dioxo-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]pyrido[1,2-a][1,4]diazonine-9-carboxamide
(
37-1,
37-2) were synthesized from
tert-butyl (R)- and (S)-(2,3,4,5-tetrahydro-1H-benzo[b]azepin-3-yl)carbamate (
37a-1,
37a-2, 164 mg, 0.625 mmol, for each enantiomer), which were separated from racemic tert-butyl
(2,3,4,5-tetrahydro-1H-benzo[b]azepin-3-yl)carbamate (
36b) by chiral HPLC separation (SFC chromatography on an IB 4.6X100mm 5miccolumn using
EtOH (15%) as co-solvent), following the same procedure as that used to prepare compound
28. Peak 1 (
37a-1) gave
37-1. MS
(m/
z) 452.16 [M+H]
+.
1H NMR (400 MHz, DMSO-d6) δ 10.37 (t, J = 5.9 Hz, 1H), 8.62 (s, 1H), 7.48 - 7.21 (m,
7H), 7.13 - 7.03 (m, 1H), 4.91 (dq, J = 4.9, 2.5 Hz, 1H), 4.58 (d, J = 5.9 Hz, 2H),
4.23 - 4.14 (m, 1H), 3.75 (dd, J = 14.8, 2.1 Hz, 1H), 2.79 (dtd, J = 17.3, 14.5, 9.6
Hz, 2H), 2.27 (td, J = 12.1, 11.6, 4.8 Hz, 1H), 2.15 - 2.05 (m, 1H). Peak 2 (
37a-2) gave
37-2. MS (
m/
z) 452.2 [M+H]
+.
1H NMR (400 MHz, DMSO-d6) δ 10.33 (t, J = 5.9 Hz, 1H), 8.59 (s, 1H), 7.40 (d, J = 6.9
Hz, 1H), 7.36 - 7.18 (m, 5H), 7.05 (td, J = 8.4, 2.5 Hz, 1H), 4.89 (s, 1H), 4.55 (d,
J = 5.9 Hz, 2H), 4.16 (d, J = 14.5 Hz, 1H), 3.86 (s, 1H), 2.81 - 2.70 (m, 2H), 2.24
(d, J = 3.5 Hz, 1H), 2.09 (d, J = 8.4 Hz, 1H).
Example 35: Preparation of (12R)- and (12S)-7-hydroxy-6,8-dioxo-N-(2,4,6-trifluorobenzyl)-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]pyrido[1,2-a][1,4]diazonine-9-carboxamide
(38-1, 38-2):
[0393]

[0394] (12R)- and (12S)-7-Hydroxy-6,8-dioxo-N-(2,4,6-trifluorobenzyl)-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]pyrido[1,2-a][1,4]diazonine-9-carboxamide
(
38-1 and
38-2) were synthesized analogously to
37-1 and
37-2 using methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate
in place of methyl 3-(benzyloxy)-5-((2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate.
MS
(m/
z) 470.1 [M+H]
+.
1H NMR (400 MHz, DMSO-d6) δ 10.36 (t, J = 5.8 Hz, 1H), 10.25 (s, 1H), 8.57 (s, 1H),
7.36 - 7.24 (m, 4H), 7.19 (t, J = 8.6 Hz, 2H), 4.86 (s, 1H), 4.56 (d, J = 5.8 Hz,
2H), 4.14 (d, J = 14.5 Hz, 1H), 3.71 (dd, J = 14.8, 2.0 Hz, 1H), 2.81 - 2.69 (m, 2H),
2.27 - 2.17 (m, 1H), 2.08 (d, J = 9.7 Hz, 1H).
Example 37: Preparation of (4R,7S,8S)- and (4S,7R,8R)-13-hydroxy-1,12-dioxo-N-(2,4,6-trifluorobenzyl)-1,3,4,5,6,7,8,12-octahydro-2,8:4,7-dimethanopyrido[1,2-a][1,4]diazecine-11-carboxamide
(40-1, 40-2):
[0395]

Synthesis of 4-bromo-2-azabicyclo[4.2.1]nonan-3-one (40a):
[0396] To a solution of 2-azabicyclo[4.2.1]nonan-3-one (1 g, 7.18 mmol) in DCM (30 mL) was
added PCl
5 (1.496 g, 7 mmol) at ice-water bath cooling. After stirring at 0-5°C for 1 h, iodine
(18.2 mg, 0.7 mmol) was added and the mixture was stirred for 5 minutes. A solution
of bromine (1.148 g, 7 mmol) in DCM (5 mL) was added at -5°C and the mixture was stirred
at room temperature for 1.5 h. Ice-water was added, and stirring was continued for
30 minutes. The mixture was extracted with ethyl acetate (100 mL) and washed with
aqueous Na
2S
2O
3 and brine. After drying and solvent removal, the residue was crystalized from DCM
and hexane to provide title compound. MS
(m/
z) 218.1 [M+H]
+.
Synthesis of 4-azido-2-azabicyclo[4.2.1]nonan-3-one (40b):
[0397] A mixture of 4-bromo-2-azabicyclo[4.2.1]nonan-3-one(
40a) (330 mg, 1.513 mmol) and NaN
3 (394 mg, 6 mmol) in DMF 10 mL) was heated under microwave reactor at 120°C overnight.
The reaction mixture was extracted with Ethyl acetate (100 mL) and the extracts were
washed with brine and dried, and the solvent removed. The residue was purified by
silica gel chromatography to provide 4-azido-2-azabicyclo[4.2.1]nonan-3-one (
40b). MS
(m/
z) 181.12 [M+H]
+.
Synthesis of rel-tert-butyl ((1R,4S,6S)-3-oxo-2-azabicyclo[4.2.1]nonan-4-yl)carbamate (40c) and rel-tert-butyl ((1R,4R,6S)-3-oxo-2-azabicyclo[4.2.1]nonan-4-yl)carbamate (40d):
[0398] A reactor was charged with 4-azido-2-azabicyclo[4.2.1]nonan-3-one (
40b) (500 mg, 2.775 mmol), Di-
tert-butyl dicarbonate (1.21 g, 6 mmol) and Palladium carbon (10wt%, wet, 296 mg) in EtOH
(30 mL) under argon. The reaction mixture was placed under vacuum and backfilled with
Hydrogen gas. After two h of stirring vigorously, the reaction mixture was diluted
with EtOH (50 mL), filtered through Celite
®, and washed with Ethyl acetate. The solvent was removed and the residue was purified
by silica gel chromatography to afford two diastereomers of the product, peak1 and
peak 2. Peak 1,
rel-tert-butyl ((1R,4S,6S)-3-oxo-2-azabicyclo[4.2.1]nonan-4-yl)carbamate (
40c). MS (
m/
z) 255.02 [M+H]
+.
1H NMR (400 MHz, Chloroform-d) δ 6.10 - 5.84 (m, 2H), 4.12 (d, J = 4.9 Hz, 1H), 3.25
(dd, J = 14.6, 3.1 Hz, 1H), 3.10 (dddd, J = 14.8, 8.4, 6.9, 1.4 Hz, 1H), 2.53 (s,
1H), 2.36 (d, J = 6.2 Hz, 1H), 1.99 - 1.82 (m, 2H), 1.73 - 1.58 (m, 3H), 1.50 (d,
J = 1.9 Hz, 1H), 1.45 (s, 9H). Peak 2,
rel-tert-butyl ((1R,4R,6S)-3-oxo-2-azabicyclo[4.2.1]nonan-4-yl)carbamate (
40d). MS
(m/
z) 277.2 [M+Na]
+.
1H NMR (400 MHz, Chloroform-d) δ 5.89 (s, 1H), 5.56 (s, 1H), 4.02 (dd, J = 6.9, 4.5
Hz, 1H), 3.36 (ddd, J = 15.3, 7.6, 6.0 Hz, 1H), 2.76 (dt, J = 15.4, 6.5 Hz, 1H), 2.42
- 2.31 (m, 1H), 2.17 (s, 1H), 1.97 (s, 2H), 1.75 (d, J = 12.7 Hz, 2H), 1.67 - 1.55
(m, 1H), 1.45 (s, 9H), 1.41 (d, J = 5.7 Hz, 1H).
Synthesis of rel-(1R,4S,6R)-2-azabicyclo[4.2.1]nonan-4-amine (40f):
[0399] rel-(1R,4S,6R)-2-Azabicyclo[4.2.1]nonan-4-amine (
40f) was synthesized from
rel-tert-butyl ((1R,4S,6S)-3-oxo-2-azabicyclo[4.2.1]nonan-4-yl)carbamate (
40c) analogously to the synthesis of 2,3,4,5-tetrahydro-1H-benzo[b]azepin-3-amine (
36c) from
tert-butyl (2-oxo-2,3,4,5-tetrahydro-1H-benzo[b]azepin-3-yl)carbamate (
36a).
Synthesis of (4S,7R,8R)- and (4R,7S,8S)-13-(benzyloxy)-1,12-dioxo-N-(2,4,6-trifluorobenzyl)-1,3,4,5,6,7,8,12-octahydro-2,8:4,7-dimethanopyrido[1,2-a][1,4]diazecine-11-carboxamide
(40g-1, 40g-2):
[0400] rel-(4R,7S,8S)-13-(Benzyloxy)-1,12-dioxo-N-(2,4,6-trifluorobenzyl)-1,3,4,5,6,7,8,12-octahydro-2,8:4,7-dimethanopyrido[1,2-a][1,4]diazecine-11-carboxamide
(
40g) was synthesized from
rel-(1R,4S,6R)-2-azabicyclo[4,2,1]nonan-4-amine (
40f) and methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate
by the same procedure as that used to prepare compound
28, followed by chiral HPLC separation to provide peak 1 (
40g-1) and peak 2 (
40g-2). MS
(m/
z) 538.2 [M+H]
+.
Synthesis of (4R,7S,8S)- and (4S,7R,8R)-13-hydroxy-1,12-dioxo-N-(2,4,6-trifluorobenzyl)-1,3,4,5,6,7,8,12-octahydro-2,8:4,7-dimethanopyrido[1,2-a][1,4]diazecine-11-carboxamide
(40-1 and 40-2):
[0401] (4R,7S,8S)- and (4S,7R,8R)-13-Hydroxy-1,12-dioxo-N-(2,4,6-trifluorobenzyl)-1,3,4,5,6,7,8,12-octahydro-2,8:4,7-dimethanopyrido[1,2-a][1,4]diazecine-11-carboxamide
(
40-1,
40-2) were synthesized from compounds
40h-1 and
40h-2, respectively, following the same procedure as used to prepare compound
28. MS
(m/
z) 448.2 [M+H]
+.
1H NMR (400 MHz, DMSO-d6) δ 10.37 (t, J = 5.8 Hz, 1H), 8.50 (s, 1H), 7.19 (t, J = 8.6
Hz, 2H), 4.55 (dd, J = 5.9, 2.8 Hz, 2H), 4.51 - 4.38 (m, 1H), 4.21 (dd, J = 13.4,
7.0 Hz, 1H), 3.80 (d, J = 15.1 Hz, 1H), 2.90 - 2.68 (m, 2H), 2.68 - 2.59 (m, 1H),
2.57 - 2.50 (m, 1H), 2.15 - 1.99 (m, 1H), 1.74 (d, J = 7.0 Hz, 2H), 1.49 (dd, J =
14.1, 6.9 Hz, 2H), 1.16 (d, J = 14.4 Hz, 1H).
Example 38: Preparation of (4S,7R,8S)- and (4R,7S,8R)-13-hydroxy-1,12-dioxo-N-(2,4,6-trifluorobenzyl)-1,3,4,5,6,7,8,12-octahydro-2,8:4,7-dimethanopyrido[1,2-a][1,4]diazecine-11-carboxamide
(41-1 and 41-2):
[0402]

[0403] (4S,7R,8S)- and (4R,7S,8R)-13-Hydroxy-1,12-dioxo-N-(2,4,6-trifluorobenzyl)-1,3,4,5,6,7,8,12-octahydro-2,8:4,7-dimethanopyrido[1,2-a][1,4]diazecine-11-carboxamide
(
41-1 and
41-2) were synthesized from
rel-tert-butyl ((1R,4R,6S)-3-oxo-2-azabicyclo[4.2.1]nonan-4-yl)carbamate (
40d) analogous to the preparation of compounds
40-1 and
40-2. MS (m/z) 448.2 [M+H]
+.
1H NMR (400 MHz, DMSO-d6) δ 10.38 (t, J = 5.8 Hz, 1H), 8.48 (s, 1H), 7.19 (t, J = 8.6
Hz, 2H), 4.78 (d, J = 9.2 Hz, 1H), 4.55 (t, J = 5.7 Hz, 2H), 4.08 (d, J = 13.3 Hz,
1H), 3.82 (d, J = 2.5 Hz, 1H), 3.05 - 2.88 (m, 2H), 2.42 (s, 1H), 2.19 (d, J = 14.0
Hz, 1H), 1.63 (dd, J = 13.2, 7.2 Hz, 3H), 1.40 (d, J = 11.9 Hz, 1H), 0.92 (d, J =
3.7 Hz, 1H).
Example 39a: Preparation of N-(2,4-difluorobenzyl)-5-hydroxy-4,6-dioxo-1,1a,2,4,6,10,11,11a-octahydro-3,10-methanocyclopropa[f]pyrido[1,2-a][1,4]diazonine-7-carboxamide
(42-1):
[0404]

Synthesis of benzyl (1-hydroxypent-4-en-2-yl)carbamate (42a):
[0405] To one round-bottom flask was added 2-aminopent-4-en-1-ol (2000 mg, 19.8 mmol), 100
mL water, and potassium carbonate, anhydrous (2.5 g, 40 mmol). To a second round-bottom
flask was added 100 mL dioxane and benzyl chloroformate (3.1 mL, 22 mmol). Each mixture
was stirred to dissolve. The amine mixture was cooled in an ice bath and the dioxane
mixture was added. The reaction mixture was allowed to slowly warm to room temperature
while stirring overnight. The reaction mixture was diluted with DCM and extracted
twice with DCM. The organic extracts were washed with NH
4Cl, dried over sodium sulfate and concentrated. The residue was purified by silica
gel chromatography to provide the title compound. MS (
m/
z) 235.9 [M+H]
+.
Synthesis of benzyl (1-oxopent-4-en-2-yl)carbamate (42b):
[0406] To a round-bottom flask was added benzyl (1-hydroxypent-4-en-2-yl)carbamate (
42a, 3 g, 13 mmol) and 200 mL DCM, followed by Dess Martin periodinane (6 g, 14.2 mmol).
After stirring 1 h, more Dess-Martin periodinane (2 g, 4.7 mmol) was added to the
reaction mixture and stirring continued for another 30 minutes. The mixture was diluted
with DCM, a solution of saturated NaHCO
3 and 11 g sodium thiosulfate was added. The resulting mixture was stirred about 10
min and extracted twice with DCM. The organic extracts were washed with a mix of brine,
water, and NaHCO
3, dried over sodium sulfate, and concentrated to provide the title compound. MS (
m/
z) 234.0 [M+H]
+.
Synthesis of benzyl (1-(allylamino)pent-4-en-2-yl)carbamate (42c):
[0407] To a round-bottom flask was added benzyl (1-oxopent-4-en-2-yl)carbamate (6 g, 26
mmol) and THF (100 mL). Allylamine (2.1 mL, 28.3 mmol) and sodium triacetoxyborohydride
(8.2 g, 39 mmol) were added and the reaction mixture was stirred overnight. The reaction
was quenched with saturated aqueous NaHCO
3 (20 mL) and the mixture extracted with EtOAc (100 mL × 3). The combined organic extracts
were dried over anhydrous sodium sulfate and concentrated
in vacuo to provide the title compound. MS
(m/
z) 275.2 [M+H]
+.
Synthesis of benzyl allyl(2-(((benzyloxy)carbonyl)amino)pent-4-en-1-yl)carbamate (42d):
[0408] To one round-bottom flask was added benzyl (1-(allylamino)pent-4-en-2-yl)carbamate
(
42c, 6.3 g, 23.1 mmol), 120 mL water, and potassium carbonate, anhydrous (2.9 g, 46.2
mmol). To a second round-bottom flask was added 120 mL dioxane and benzyl chloroformate
(3.6 mL, 25.4 mmol). Each mixture was stirred to dissolve. The amine mixture was cooled
in an ice bath and the dioxane mixture was added. The reaction mixture was allowed
to slowly warm to room temperature while stirring overnight. The reaction mixture
was diluted with DCM and extracted twice with DCM. The organic extracts were washed
with NH
4Cl, dried over sodium sulfate and concentrated. The residue was purified by silica
gel chromatography to provide the title compound. MS
(m/
z) 409.7 [M+H]
+.
Synthesis of benzyl-3-(((benzyloxy)carbonyl)amino)azepane-1-carboxylate (42e-1 and 42e-2):
[0409] To a round-bottom flask was added benzyl allyl(2-(((benzyloxy)carbonyl)amino)pent-4-en-1-yl)carbamate
(
42d, 6.3 mg, 16 mmol), DCM (400 mL), and bis(tricyclohexylphosphine)benzylidine ruthenium
(IV) dichloride (Grubbs Catalyst
â„¢ 1st Generation) (500 mg, 0.6 mmol). The mixture was heated at reflux overnight, and
concentrated. The residue was dissolved in DCM and purified by silica gel chromatography.
The mixture of enantiomers was separated into individual enantiomers by preparative
SFC chromatography on a Chiralcel
® OJ-H column using MeOH co-solvent to provide
42e-1 (peak 1) and
42e-2 (peak 2). MS
(m/
z) 381.5 [M+H]
+.
Synthesis of benzyl 5-(((benzyloxy)carbonyl)amino)-3-azabicyclo[5.1.0]octane-3-carboxylate
(42f-1):
[0410] To a three neck flask was added
42e-1 (626 mg, 1.6 mmol) and DCM (3 mL). The resulting mixture was cooled to 0 C, and 1M
diethylzinc in hexane (3.46 mL) was added slowly, followed by slow addition of diiodomethane
(0.5 mL, 6.6 mmol). The reaction mixture was stirred at 0 °C for 10 min, and a second
charge of diethylzinc and diiodomethane was added. The mixture was stirred at 0 °C
for 2 h, removed from the ice bath stirred and another 2 h. A third charge of diethylzinc
and diiodomethane was added and the mixture was stirred overnight. The reaction was
quenched with water and extracted twice with DCM. The combined organic extracts were
dried over sodium sulfate, filtered, and concentrated. The residue was purified by
silica gel chromatography to provide the title compound. MS
(m/
z) 395.3 [M+H]
+.
Synthesis of 5-(benzyloxy)-N-(2,4-difluorobenzyl)-4,6-dioxo-1,1a,2,4,6,10,11,11a-octahydro-3,10-methanocyclopropa[f]pyrido[1,2-a][1,4]diazonine-7-carboxamide
(42h-1):
[0411] To a round-bottom flask was added
42f-1 (200 mg, 0.5 mmol), Ethanol (20 mL), and Palladium on carbon 10 wt. % loading (dry
basis), matrix carbon powder, wet support (216 mg, 0.2 mmol). The mixture was sparged
with N
2, and a balloon of H
2 was added. The reaction mixture was stirred overnight, filtered over Celite
®, and concentrated. The residue was combined with methyl 3-benzyloxy-5-[(2,4-difluorophenyl)methylcarbamoyl]-4-oxo-pyran-2-carboxylate
(108.9 mg, 0.5 mmol), NaHCO
3 (85 mg, 1 mmol), and MeOH (3 mL). The mixture was stirred at 70 °C for approximately
4 h until cyclization was complete. The solids were filtered off and the solution
concentrated. The residue was dissolved in DMF/water/TFA and purified by HPLC to provide
the major diastereomer of the title compound. MS (
m/
z) 506.2 [M+H]
+.
Synthesis of N-(2,4-difluorobenzyl)-5-hydroxy-4,6-dioxo-1,1a,2,4,6,10,11,11a-octahydro-3,10-methanocyclopropa[f]pyrido[1,2-a][1,4]diazonine-7-carboxamide
(42-1):
[0412] To a vial was add 5-(benzyloxy)-N-(2,4-difluorobenzyl)-4,6-dioxo-1,1a,2,4,6,10,11,11a-octahydro-3,10-methanocyclopropa[f]pyrido[1,2-a][1,4]diazonine-7-carboxamide
(
42h-1, 63 mg, 0.12 mmol), toluene (2 mL), and TFA (1 mL). The reaction mixture was stirred
until LCMS indicated complete deprotection, concentrated, diluted with DMF, and purified
by HPLC to provide the title compound. MS (
m/
z) 416.2 [M+H]
+.
1H NMR (400 MHz, Chloroform-d) δ 10.59 (s, 1H), 8.55 (s, 1H), 7.41 - 7.32 (m, 1H),
6.89 - 6.78 (m, 2H), 4.67 (d, 2H), 4.64 - 4.55 (m, 1H), 4.48 (dd, 1H), 4.22 (dd, 1H),
3.94 - 3.83 (m, 1H), 3.75 - 3.66 (m, 1H), 2.96 - 2.84 (m, 1H), 1.38 - 1.07 (m, 3H),
0.49 - 0.41 (m, 1H).
Example 39b: Preparation of (1aS,10R,11aS)-N-(2,4-difluorobenzyl)-5-hydroxy-4,6-dioxo-1,1a,2,4,6,10,11,11a-octahydro-3,10-methanocyclopropa[f]pyrido[1,2-a][1,4]diazonine-7-carboxamide
(42-2):
[0413]

[0414] (1aS,10R,11aS)-N-(2,4-Difluorobenzyl)-5-hydroxy-4,6-dioxo-1,1a,2,4,6,10,11,11a-octahydro-3,10-methanocyclopropa[f]pyrido[1,2-a][1,4]diazonine-7-carboxamide
(
42-2) was prepared analogous to
42-1, beginning with
42e-2 (peak 2) in place of
42e-1 (peak 1). MS (
m/
z) 416.2 [M+H]
+.
1H NMR (400 MHz, Chloroform-
d) δ 10.46 (s, 1H), 8.43 (s, 1H), 7.40 - 7.30 (m, 1H), 6.87 - 6.75 (m, 2H), 4.64 (d,
2H), 4.56 - 4.50 (m, 1H), 4.50 - 4.40 (m, 1H), 4.18 (dd, 1H), 3.86 (dd, 1H), 3.67
(d, 1H), 2.93 - 2.80 (m, 1H), 1.37 - 1.04 (m, 3H), 0.91 - 0.76 (m, 1H), 0.47 - 0.34
(m, 1H).
Example 40: Preparation of (7S)-2,4,6-trifluorobenzyl 12-methoxy-1,11-dioxo-1,3,4,5,6,11-hexahydro-7l3-2,7-methanopyrido[2,1-c][1,4]diazonine-10-carboxylate
and (7R) -2,4,6-trifluorobenzyl 12-methoxy-1,11-dioxo-1,3,4,5,6,11-hexahydro-7l3-2,7-methanopyrido[2,1-c][1,4]diazonine-10-carboxylate
(43-1, 43-2):
[0415]

Synthesis of 3-bromo-6-fluoro-1,3,4,5-tetrahydro-2H-benzo[b]azepin-2-one (43a):
[0416] Into a solution of 6-fluoro-1,3,4,5-tetrahydro-2H-benzo[b]azepin-2-one (1 g, 5.58
mmol) in DCM (25 mL), phosphorus pentachloride (1.16 g, 5.58 mmol) was added under
ice cooling bath. After the reaction mixture was stirred for 5 hrs, iodine (14.2 mg,
0.558 mmol) was added, followed by bromine (0.892 g, 5.58 mmol). The reaction mixture
was allowed to warm to rt and was stirred for 1.5 hr. The reaction mixture was extracted
with ethyl acetate and washed with a water solution of Na
2S
2SO
3 and brine. The organic layer was dried over MgSO
4, and the solvent was removed by rotary evaporator. The title compound was crystalized
from a mixture of DCM/ethyl acetate. MS (
m/
z) 260 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.18 (s, 1H), 7.25 (td, J = 8.1, 6.3 Hz, 1H), 6.99 (ddd, J = 9.4, 8.4, 1.1 Hz,
1H), 6.84 (d, J = 7.9 Hz, 1H), 4.65 (dd, J = 9.2, 7.3 Hz, 1H), 2.96 - 2.83 (m, 1H),
2.76 - 2.59 (m, 2H), 2.47 - 2.41 (m, 1H).
Synthesis of 3-azido-6-fluoro-1,3,4,5-tetrahydro-2H-benzo[b]azepin-2-one (43b):
[0417] Into a solution of 3-bromo-6-fluoro-1,3,4,5-tetrahydro-2H-benzo[b]azepin-2-one (43a,
109 mg, 0.422 mmol) in DMF (5 mL), sodium azide (110 mg, 1.69 mmol) was added. After
stirring for 4 hr at 60 °C, the reaction mixture was extracted with ethyl acetate
and washed with brine. The organic layer was dried over MgSO
4, and the solvent removed by rotary evaporator. The residue was purified by silica-gel
column to provide the title compound. MS
(m/
z) 221 [M+H]
+.
Synthesis of tert-butyl (6-fluoro-2-oxo-2,3,4,5-tetrahydro-1H-benzo[b]azepin-3-yl)carbamate
(43c):
[0418] Into a solution of 3-azido-6-fluoro-1,3,4,5-tetrahydro-2H-benzo[b]azepin-2-one (
43b, 880 mg, 4 mmol) in THF (30 mL), di-tert-butyl dicarbonate (1.308 g, 5.99 mmol) and
10% Pd/C (425 mg) were added, then the mixture was sparged under a hydrogen atmosphere
(balloon pressure). After the reaction was stirred for 2 hr, it was filtered through
a pad of Celite
® and washed with ethyl acetate, and the filtrate was concentrated in rotary evaporator.
The residue was purified by silica-gel column, providing the title compound. MS (
m/
z) 317.1 [M+Na]
+.
1H NMR (400 MHz, DMSO-d
6) δ 9.87 (s, 1H), 7.32 - 7.21 (m, 1H), 7.00 (q, J = 8.5 Hz, 2H), 6.85 (d, J = 7.9
Hz, 1H), 3.91 - 3.78 (m, 1H), 2.96 (dd, J = 14.0, 6.3 Hz, 1H), 2.45 - 2.28 (m, 1H),
2.23 - 1.98 (m, 2H), 1.32 (s, 9H).
Synthesis of tert-butyl (S)-(6-fluoro-2,3,4,5-tetrahydro-1H-benzo[b]azepin-3-yl)carbamate
and (R)-(6-fluoro-2,3,4,5-tetrahydro-1H-benzo[b]azepin-3-yl)carbamate (43d-1 and 43d-2):
[0419] Into a solution of tert-butyl (6-fluoro-2-oxo-2,3,4,5-tetrahydro-1H-benzo[b]azepin-3-yl)carbamate
(
43c, 800 mg, 2.72 mmol) in THF (30 mL), BH
3-THF solution (1 N, 13 mL) was added at room temperature. After the reaction was stirred
overnight, the reaction was quenched with MeOH (1 mL) and water solution of sodium
bicarbonate. The resulting mixture was extracted with ethyl acetate (100 mL) and washed
with brine. The organic layer was dried over MgSO
4 and concentrated under vacuum. The residue was purified by silica-gel column, to
provide tert-butyl (6-fluoro-2-oxo-2,3,4,5-tetrahydro-1H-benzo[b]azepin-3-yl)carbamate
(
43d). MS
(m/
z) 281.2 [M+H]
+.
[0420] 43d was separated into individual enantiomers by chiral HPLC (SFC chromatography on an
IB 4.6X100mm 5mic column using EtOH (15%) as co solvent) to provide the title compounds.
Synthesis of (S)-6-fluoro-2,3,4,5-tetrahydro-1H-benzo[b]azepin-3-amine and (R)-6-fluoro-2,3,4,5-tetrahydro-1H-benzo[b]azepin-3-amine
(43e-1 and 43e-2)
[0421] Into a solution of (S)-(6-fluoro-2,3,4,5-tetrahydro-1H-benzo[b]azepin-3-yl)carbamate
or (R)-(6-fluoro-2,3,4,5-tetrahydro-1H-benzo[b]azepin-3-yl)carbamate (65 mg, 0.232
mmol) in DCM (5 mL), TFA (1 mL) was added at rt. After 2 hr, the solvent and excess
TFA was removed by rotary evaporator to afford the title compounds (
43e-1 or
43e-2), which were carried forward to next step, without further purification. MS
(m/
z) 181.2 [M+H]
+.
Synthesis of methyl (S)-3-(benzyloxy)-1-(6-fluoro-2,3,4,5-tetrahydro-1H-benzo[b]azepin-3-yl)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-1,4-dihydropyridine-2-carboxylate
and (R)-3-(benzyloxy)-1-(6-fluoro-2,3,4,5-tetrahydro-1H-benzo[b]azepin-3-yl)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-1,4-dihydropyridine-2-carboxylate
(43f-1 and 43f-2):
[0422] Into a solution of (S)-6-fluoro-2,3,4,5-tetrahydro-1H-benzo[b]azepin-3-amine or (R)-6-fluoro-2,3,4,5-tetrahydro-1H-benzo[b]azepin-3-amine
(
43e-1 or
43e-2, 40 mg, 0.143 mmol) in MeOH/Water (v/v=6/1, 3.5 mL), sodium bicarbonate (59.9 mg,
0.713 mmol) and methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate
(60 mg, 0.134 mmol) were added. The reaction mixture was stirred overnight at 60 °C,
extracted with ethyl acetate (100 mL), and washed with brine. The organic layer was
dried over MgSO
4 and the solvent was removed by rotary evaporator, to give the title compounds (
43f-1 or
43f-2), which were carried forward without further purification. MS (
m/
z) 610.2 [M+H]
+.
Synthesis of mixture of (12S)-7-(benzyloxy)-1-fluoro-6,8-dioxo-N-(2,4,6-trifluorobenzyl)-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]pyrido[1,2-a][1,4]diazonine-9-carboxamide
and (12S)-1-fluoro-7-methoxy-6,8-dioxo-N-(2,4,6-trifluorobenzyl)-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]pyrido[1,2-a][1,4]diazonine-9-carboxamide,
and (12R)-7-(benzyloxy)-1-fluoro-6,8-dioxo-N-(2,4,6-trifluorobenzyl)-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]pyrido[1,2-a][1,4]diazonine-9-carboxamide and (12R)-1-fluoro-7-methoxy-6,8-dioxo-N-(2,4,6-trifluorobenzyl)-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]pyrido[1,2-a][1,4]diazonine-9-carboxamide
(mixture of 43g-1 and 43h-1) and (mixture of 43g-2 and 43h-2):
[0423] Into a solution of crude of (S)- or (R)-2-methyl 5-(2,4,6-trifluorobenzyl) 3-(benzyloxy)-1-(6-fluoro-2,3,4,5-tetrahydro-1H-benzo[b]azepin-3-yl)-4-oxo-1,4-dihydropyridine-2,5-dicarboxylate
(
43f-1 or
43f-2, 80 mg. 0.131 mmol) in MeOH (6 mL), water solution of LiOH (2 N, 2 mL) was added.
After the reaction was stirred for 2 hr, the solvent was removed and extracted with
ethyl acetate (100 mL). After the organic layer was dried over MgSO
4, the solvent was removed by rotary evaporator affording the title compounds (mixture
of
43g-1 and
43h-1 or mixture of
43g-2 and
43h-2), which were taken on crude, without further purification.
43g-1,
43g-2: MS (
m/
z) 578.2 [M+H]
+.
43h-1,
43h-2: MS (
m/
z) 501.2 [M+H]
+.
Synthesis of (12S)-1-fluoro-7-hydroxy-6,8-dioxo-N-(2,4,6-trifluorobenzyl)-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]pyrido[1,2-a][1,4]diazonine-9-carboxamide
and (12R)-1-fluoro-7-hydroxy-6,8-dioxo-N-(2,4,6-trifluorobenzyl)-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]pyrido[1,2-a][1,4]diazonine-9-carboxamide
(43-1 and 43-2):
[0424] To the mixture of (12S)-7-(benzyloxy)-1-fluoro-6,8-dioxo-N-(2,4,6-trifluorobenzyl)-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]pyrido[1,2-a][1,4]diazonine-9-carboxamide
with 1-fluoro-7-methoxy-6,8-dioxo-N-(2,4,6-trifluorobenzyl)-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]pyrido[1,2-a][1,4]diazonine-9-carboxamide
(
43g-1/
43h-1,198 mg, 0.343 mmol) or (12R)-7-(benzyloxy)-1-fluoro-6,8-dioxo-N-(2,4,6-trifluorobenzyl)-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]pyrido[1,2-a][1,4]diazonine-9-carboxamide
with 1-fluoro-7-methoxy-6,8-dioxo-N-(2,4,6-trifluorobenzyl)-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]pyrido[1,2-a][1,4]diazonine-9-carboxamide
(
43g-2/43h-2, 98 mg, 0.17 mmol) in DMF (6 mL), LiCl (10 eq.) was added. After stirring at 105
°C for 1.5 hr, the reaction mixture was filtered, and purified by preparative HPLC
(Gemini 10u C18 110A), eluting with 15-80% acetonitrile in water (0.1% TFA) over 15
min, to give the title compounds (
43-1 or
43-2).
[0425] 43-1: MS
(m/
z) 488.2 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.34 (t, J = 5.8 Hz, 1H), 8.58 (s, 1H), 7.32 (dd, J = 8.1, 6.1 Hz, 1H), 7.19
(td, J = 8.3, 3.5 Hz, 4H), 4.95 - 4.85 (m, 1H), 4.56 (d, J = 5.7 Hz, 2H), 4.13 (d,
J = 14.7 Hz, 1H), 3.85 (dd, J = 14.9, 2.1 Hz, 1H), 2.88 (dd, J = 17.0, 9.7 Hz, 1H),
2.71 (dd, J = 16.9, 9.2 Hz, 1H), 2.42 - 2.28 (m, 1H), 2.03 - 1.92 (m, 1H).
[0426] 43-2: MS
(m/
z) 488.1 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.34 (t, J = 5.8 Hz, 1H), 8.58 (s, 1H), 7.33 (td, J = 8.1, 6.1 Hz, 1H), 7.19
(td, J = 8.4, 4.0 Hz, 3H), 4.90 (t, J = 5.8 Hz, 1H), 4.56 (d, J = 5.7 Hz, 2H), 4.13
(d, J = 14.6 Hz, 1H), 3.87 (d, J = 2.2 Hz, 1H), 2.88 (dd, J = 16.5, 10.1 Hz, 1H),
2.71 (dd, J = 16.9, 9.2 Hz, 1H), 2.35 (q, J = 7.7, 7.0 Hz, 1H), 1.98 (d, J = 8.6 Hz,
1H).
Example 41: Preparation of (8R,Z)-N-(2,4-difluorobenzyl)-13-hydroxy-1,12-dioxo-1,3,4,7,8,12-hexahydro-2,8-methanopyrido[1,2-a][1,4]diazecine-11-carboxamide and (8S,Z)-N-(2,4-difluorobenzyl)-13-hydroxy-1,12-dioxo-1,3,4,7,8,12-hexahydro-2,8-methanopyrido[1,2-a][1,4]diazecine-11-carboxamide (44-1 and 44-2):
[0427]

Synthesis of benzyl (R,Z)-3-(((benzyloxy)carbonyl)amino)-3,4,7,8-tetrahydroazocine-1(2H)-carboxylate
and (S,Z)-3-(((benzyloxy)carbonyl)amino)-3,4,7,8-tetrahydroazocine-1(2H)-carboxylate
(44a-1 and 44a-2)
[0428] The title compounds were synthesized from 2-aminopent-4-en-1-ol in a manner analogous
to
42e-1 and
42e-2, except that
42-b was reacted with but-3-en-1-amine in place of allylamine.
44a-1: MS (
m/
z) 395.2 [M+H]
+.
44b-1: MS (
m/
z) 395.2 [M+H]
+.
Synthesis of (R,Z)- and (S,Z)-1,2,3,4,7,8-hexahydroazocin-3-amine (44b-1 and 44b-2)
[0429] To a vial was added benzyl (R,Z)-3-(((benzyloxy)carbonyl)amino)-3,4,7,8-tetrahydroazocine-1(2H)-carboxylate
or (S,Z)-3-(((benzyloxy)carbonyl)amino)-3,4,7,8-tetrahydroazocine-1(2H)-carboxylate
(
44a-1 or
44a-2, 500 mg, 1.3 mmol) and 4 N HCl in dioxane (6.3 mL, 25 mmol). The reaction was stirred
at 95 °C overnight, cooled to rt, and concentrated, to give the title compounds (
44b-1 or
44b-2), which were used subsequently without further purification. MS
(m/
z) 127.2 [M+H]
+.
Synthesis of (8R,Z)-N-(2,4-difluorobenzyl)-13-hydroxy-1,12-dioxo-1,3,4,7,8,12-hexahydro-2,8-methanopyrido[1,2-a][1,4]diazecine-11-carboxamide and (8S,Z)-N-(2,4-difluorobenzyl)-13-hydroxy-1,12-dioxo-1,3,4,7,8,12-hexahydro-2,8-methanopyrido[1,2-a][1,4]diazecine-11-carboxamide
(44-1 and 44-2)
[0430] The title compounds were synthesized from (R,Z)-1,2,3,4,7,8-hexahydroazocin-3-amine
or (S,Z)-1,2,3,4,7,8-hexahydroazocin-3-amine (
44b-1 or
44b-2, 18.9 mg, 0.163 mmol) and ethyl 3-(benzyloxy)-5-((2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate
(70 mg, 0.163 mmol) following a procedure similar to the procedure for preparation
of compound
28.
[0431] 44-1: MS
(m/
z) 416.3 [M+H]
+.
1H NMR (400 MHz, Chloroform-
d) δ 10.71 - 10.56 (m, 1H), 8.56 (s, 1H), 7.38 (q, 1H), 6.91 - 6.78 (m, 2H), 6.05 (q,
1H), 5.71 (q, 1H), 4.76 - 4.61 (m, 2H), 4.55 (ddd, 1H), 4.48 - 4.34 (m, 1H), 4.02
- 3.90 (m, 1H), 3.75 (d, 1H), 3.09 - 2.97 (m, 1H), 2.73 - 2.64 (m, 1H), 2.63 - 2.52
(m, 1H), 2.52 - 2.45 (m, 1H), 2.45 - 2.32 (m, 1H).
[0432] 44-2: MS
(m/
z) 416.2 [M+H]
+.
1H NMR (400 MHz, Chloroform-
d) δ 10.66 - 10.51 (m, 1H), 8.52 (s, 1H), 7.38 (q, 1H), 6.84 (q, 2H), 6.05 (q, 1H),
5.71 (q, 1H), 4.74 - 4.62 (m, 2H), 4.56 (ddd, 1H), 4.46 - 4.35 (m, 1H), 3.97 (dd,
1H), 3.75 (d, 1H), 3.08 - 2.99 (m, 1H), 2.71 - 2.63 (m, 1H), 2.63 - 2.54 (m, 1H),
2.53 - 2.45 (m, 1H), 2.44 - 2.32 (m, 1H).
Example 42: Preparation of (12S)-1-chloro-7-hydroxy-6,8-dioxo-N-(2,4,6-trifluorobenzyl)-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]pyrido[1,2-a][1,4]diazonine-9-carboxamide
and (12R)-1-chloro-7-hydroxy-6,8-dioxo-N-(2,4,6-trifluorobenzyl)-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]pyrido[1,2-a][1,4]diazonine-9-carboxamide
(45-1 and 45-2):
[0433]

[0434] The title compounds were prepared similarly to
43-1 and
43-2, using 6-chloro-1,3,4,5-tetrahydro-2H-benzo[b]azepin-2-one in place of 6-fluoro-1,3,4,5-tetrahydro-2H-benzo[b]azepin-2-one.
[0435] 45-1: MS
(m/
z) 504.1 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.38 (t, J = 5.8 Hz, 1H), 8.60 (s, 1H), 7.47 (dd, J = 6.7, 2.8 Hz, 1H), 7.40
- 7.30 (m, 2H), 7.29 - 7.16 (m, 2H), 4.96 - 4.88 (m, 1H), 4.59 (d, J = 5.7 Hz, 2H),
4.15 (dd, J = 15.0, 1.9 Hz, 1H), 3.86 (dd, J = 14.7, 2.2 Hz, 1H), 3.04 (ddd, J = 17.1,
9.7, 2.3 Hz, 1H), 2.86 (ddd, J = 15.8, 10.3, 5.6 Hz, 1H), 2.41 - 2.32 (m, 1H), 2.06
(dd, J = 13.4, 6.9 Hz, 1H).
[0436] 45-2: MS
(m/
z) 504.1 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.38 (t, J = 5.8 Hz, 1H), 10.27 (s, 1H), 8.60 (s, 1H), 7.47 (dd, J = 6.7, 2.7
Hz, 1H), 7.41 - 7.30 (m, 2H), 7.29 - 7.16 (m, 2H), 4.96 - 4.88 (m, 1H), 4.59 (d, J
= 5.7 Hz, 2H), 4.20 - 4.11 (m, 1H), 3.86 (dd, J = 14.7, 2.2 Hz, 1H), 3.04 (ddd, J
= 17.2, 9.8, 2.3 Hz, 1H), 2.86 (dd, J = 16.8, 9.2 Hz, 1H), 2.42 - 2.33 (m, 1H), 2.04
(q, J = 13.0, 9.4 Hz, 1H).
Example 43: Preparation of (12S)-4-fluoro-7-hydroxy-6,8-dioxo-N-(2,4,6-trifluorobenzyl)-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]pyrido[1,2-a][1,4]diazonine-9-carboxamide
and (12R)-4-fluoro-7-hydroxy-6,8-dioxo-N-(2,4,6-trifluorobenzyl)-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]pyrido[1,2-a][1,4]diazonine-9-carboxamide
(46-1 and 46-2):
[0437]

Synthesis of methyl (S)- and (R)-3-(benzyloxy)-1-(9-fluoro-2,3,4,5-tetrahydro-1H-benzo[b]azepin-3-yl)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-1,4-dihydropyridine-2-carboxylate
(46a-1 and 46a-2):
[0438] The title compounds were prepared in a manner similar to methyl (S)-3-(benzyloxy)-1-(6-fluoro-2,3,4,5-tetrahydro-1H-benzo[b]azepin-3-yl)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-1,4-dihydropyridine-2-carboxylate
and (R)-3-(benzyloxy)-1-(6-fluoro-2,3,4,5-tetrahydro-1H-benzo[b]azepin-3-yl)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-1,4-dihydropyridine-2-carboxylate
(
43f-1 and
43f-2) using 9-fluoro-1,3,4,5-tetrahydro-2H-benzo[b]azepin-2-one in place of 6-fluoro-1,3,4,5-tetrahydro-2H-benzo[b]azepin-2-one.
Synthesis of (12S)-7-(benzyloxy)-4-fluoro-6,8-dioxo-N-(2,4,6-trifluorobenzyl)-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]pyrido[1,2-a][1,4]diazonine-9-carboxamide and (12R)-7-(benzyloxy)-4-fluoro-6,8-dioxo-N-(2,4,6-trifluorobenzyl)-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]pyrido[1,2-a][1,4]diazonine-9-carboxamide
(46b-1 and 46b-2):
[0439] Into a solution of methyl (S)-3-(benzyloxy)-1-(9-fluoro-2,3,4,5-tetrahydro-1H-benzo[b]azepin-3-yl)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-1,4-dihydropyridine-2-carboxylate
or (R)-3-(benzyloxy)-1-(9-fluoro-2,3,4,5-tetrahydro-1H-benzo[b]azepin-3-yl)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-1,4-dihydropyridine-2-carboxylate
(
46a-1 or
46a-2, 80 mg, 0.13 mmol) in MeOH (20 mL), LiOH (2 N, 4 mL) was added at rt. After heating
to 50 °C and stirring for 2 hr, a citric acid solution (5% in water) was added and
reaction was extracted with ethyl acetate (100 mL). Removal of solvent gave (S)-3-(benzyloxy)-1-(9-fluoro-2,3,4,5-tetrahydro-1H-benzo[b]azepin-3-yl)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-1,4-dihydropyridine-2-carboxylic
acid or (R)-3-(benzyloxy)-1-(9-fluoro-2,3,4,5-tetrahydro-1H-benzo[b]azepin-3-yl)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-1,4-dihydropyridine-2-carboxylic
acid, which was carried forward without further purification. MS
(m/
z) 596.2 [M+H]
+.
[0440] Into a solution of (S)-3-(benzyloxy)-1-(9-fluoro-2,3,4,5-tetrahydro-1H-benzo[b]azepin-3-yl)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-1,4-dihydropyridine-2-carboxylic
acid or (R)-3-(benzyloxy)-1-(9-fluoro-2,3,4,5-tetrahydro-1H-benzo[b]azepin-3-yl)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-1,4-dihydropyridine-2-carboxylic
acid in DCM (5 mL), DIPEA(39 mg, 0.302 mmol) and HATU (86.1 mg, 0.227 mmol) were added
at rt. After 1 hr, the reaction mixture was purified by silica-gel column elicited
with ethyl acetate to afford the title compounds (
46b-1 or
46b-2). MS
(m/
z) 578.2 [M+H]
+.
Synthesis of (12S)-4-fluoro-7-hydroxy-6,8-dioxo-N-(2,4,6-trifluorobenzyl)-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]pyrido[1,2-a][1,4]diazonine-9-carboxamide
and (12R)-4-fluoro-7-hydroxy-6,8-dioxo-N-(2,4,6-trifluorobenzyl)-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]pyrido[1,2-a][1,4]diazonine-9-carboxamide
(46-1 and 46-2):
[0441] Into a solution of (12S)-7-(benzyloxy)-4-fluoro-6,8-dioxo-N-(2,4,6-trifluorobenzyl)-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]pyrido[1,2-a][1,4]diazonine-9-carboxamide
or (12R)-7-(benzyloxy)-4-fluoro-6,8-dioxo-N-(2,4,6-trifluorobenzyl)-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]pyrido[1,2-a][1,4]diazonine-9-carboxamide
(
46b-1 or
46b-2, 80 mg, 0.13 mmol) in toluene (4 mL), TFA (1 mL) was added at rt. After stirring
overnight, solvent and excess TFA was removed by rotatory evaporation, and the residue
was purified by preparative HPLC to afford the title compounds.
[0442] 46-1: MS
(m/
z) 488.1 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.35 (t, J = 5.8 Hz, 1H), 8.57 (s, 1H), 7.29 (dd, J = 7.9, 5.5 Hz, 1H), 7.25
- 7.03 (m, 4H), 4.90 (s, 1H), 4.57 (d, J = 5.7 Hz, 2H), 4.19 (d, J = 14.6 Hz, 1H),
3.77 (dd, J = 14.9, 2.0 Hz, 1H), 2.90 - 2.81 (m, 1H), 2.76 (d, J = 10.5 Hz, 1H), 2.32
- 2.19 (m, 1H), 2.07 (d, J = 7.8 Hz, 1H).
[0443] 46-2: MS
(m/
z) 488.1 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.34 (d, J = 5.8 Hz, 1H), 10.27 (s, 1H), 10.22 (s, 1H), 8.57 (s, 1H), 7.34 -
7.26 (m, 1H), 7.23 - 7.05 (m, 4H), 4.90 (s, 1H), 4.57 (d, J = 5.8 Hz, 2H), 4.19 (d,
J = 14.6 Hz, 1H), 3.77 (dd, J = 14.8, 2.0 Hz, 1H), 2.86 (dd, J = 16.8, 7.8 Hz, 1H),
2.77 - 2.70 (m, 1H), 2.30 - 2.19 (m, 1H), 2.07 (d, J = 7.8 Hz, 1H).
Example 44: Preparation of (7R)-N-(2,4-difluorobenzyl)-12-hydroxy-1,11-dioxo-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
and (7S)-N-(2,4-difluorobenzyl)-12-hydroxy-1,11-dioxo-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(47-1 and 47-2):
[0444]

[0445] The title compounds were synthesized in a manner analogous to
44-1 and
44-2, using benzyl-3-(((benzyloxy)carbonyl)amino)azepane-1-carboxylate (
42e-1 or
42e-2) in place of benzyl (R,Z)-3-(((benzyloxy)carbonyl)amino)-3,4,7,8-tetrahydroazocine-1(2H)-
or (S,Z)-3-(((benzyloxy)carbonyl)amino)-3,4,7,8-tetrahydroazocine-1(2H)-carboxylate
(
44a-1 or
44a-2).
[0446] 47-1: MS
(m/
z) 402.4 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) δ 10.38 (s, 1H), 8.41 (s, 1H), 7.60 - 7.23 (m, 1H), 7.15 - 6.90 (m, 2H), 5.79 -
5.50 (m, 2H), 5.17 - 4.87 (m, 1H), 4.78 (d, J = 9.2 Hz, 1H), 4.60 (d, J = 5.9 Hz,
2H), 3.96 - 3.83 (m, 1H), 3.82 - 3.66 (m, 2H), 3.14 - 2.86 (m, 1H), 2.61 - 2.34 (m,
1H), 2.15 - 2.13 (m, 1H).
[0447] 47-1: MS
(m/
z) 402.3 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) δ 10.37 (s, 1H), 8.42 (s, 1H), 7.43 (td, J = 8.7, 6.4 Hz, 1H), 7.06 - 6.87 (m, 2H),
5.69 - 5.54 (m, 2H), 4.96 (dd, J = 18.1, 3.2 Hz, 1H), 4.79 (ddt, J = 9.1, 4.5, 2.1
Hz, 1H), 4.60 (d, J = 5.8 Hz, 2H), 3.88 (dd, J = 14.2, 1.7 Hz, 1H), 3.82 - 3.68 (m,
2H), 3.11 - 2.93 (m, 1H), 2.50 - 2.36 (m, 1H).
Example 45: Preparation of (12S)-2-chloro-7-hydroxy-6,8-dioxo-N-(2,4,6-trifluorobenzyl)-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]pyrido[1,2-a][1,4]diazonine-9-carboxamide
and (12R)-2-chloro-7-hydroxy-6,8-dioxo-N-(2,4,6-trifluorobenzyl)-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]pyrido[1,2-a][1,4]diazonine-9-carboxamide
(48-1 and 48-2):
[0448]

[0449] The title compounds were prepared in a manner analogous to
43-1 and
43-2, using 7-chloro-1,3,4,5-tetrahydro-2H-benzo[b]azepin-2-one in place of 6-fluoro-1,3,4,5-tetrahydro-2H-benzo[b]azepin-2-one.
[0450] 48-1: MS
(m/
z) 505.2 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.38 (t, J = 5.8 Hz, 1H), 8.59 (s, 1H), 7.47 (d, J = 1.8 Hz, 1H), 7.38 (d, J
= 1.8 Hz, 2H), 7.30 - 7.04 (m, 2H), 4.89 (td, J = 5.0, 2.4 Hz, 1H), 4.59 (d, J = 5.8
Hz, 2H), 2.95 - 2.64 (m, 2H), 2.40 - 2.24 (m, 1H), 2.15 - 1.98 (m, 1H).
[0451] 48-2: MS
(m/
z) 504.1 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.38 (t, J = 5.8 Hz, 1H), 8.59 (s, 1H), 7.47 (d, J = 1.8 Hz, 1H), 7.37 (s, 1H),
7.22 (t, J = 8.6 Hz, 2H), 4.89 (s, 1H), 4.59 (d, J = 5.7 Hz, 2H), 4.15 (d, J = 14.4
Hz, 1H), 3.76 (dd, J = 14.7, 2.0 Hz, 1H), 2.92 - 2.79 (m, 1H), 2.73 (dd, J = 9.9,
6.6 Hz, 1H), 2.27 (s, 2H), 2.07 (d, J = 10.2 Hz, 2H).
Example 46: Preparation of (12S)-2-chloro-N-(2,4-difluorobenzyl)-7-hydroxy-6,8-dioxo-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]pyrido[1,2-a][1,4]diazonine-9-carboxamide
and (12R)-2-chloro-N-(2,4-difluorobenzyl)-7-hydroxy-6,8-dioxo-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]
pyrido [1,2-a][1,4]diazonine-9-carboxamide (49-1 and 49-2):
[0452]

[0453] The title compounds were prepared in a manner analogous to
43-1 and
43-2, using 7-chloro-1,3,4,5-tetrahydro-2H-benzo[b]azepin-2-one in place of 6-fluoro-1,3,4,5-tetrahydro-2H-benzo[b]azepin-2-one,
and methyl 3-(benzyloxy)-5-((2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate
in place of methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate.
[0454] 49-1: MS
(m/
z) 487.1 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.35 (t,
J = 5.9 Hz, 1H), 8.61 (s, 1H), 7.55 - 7.33 (m, 4H), 7.29 - 7.18 (m, 1H), 7.12 - 6.97
(m, 1H), 4.97 - 4.83 (m, 1H), 4.58 (d,
J = 5.8 Hz, 2H), 4.22 - 4.10 (m, 1H), 2.97 - 2.59 (m, 2H), 2.30 (m, 1H), 2.08 (m, 1H).
[0455] 49-2: MS (
m/
z) 486.1 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.35 (t, J = 5.9 Hz, 1H), 10.06 (s, 1H), 8.61 (s, 1H), 7.50 - 7.38 (m, 2H), 7.38
(d, J = 1.4 Hz, 2H), 7.26 (ddd, J = 10.5, 9.4, 2.6 Hz, 1H), 7.08 (tt, J = 8.6, 1.7
Hz, 1H), 4.91 (dq, J = 5.0, 2.5 Hz, 1H), 4.58 (d, J = 5.9 Hz, 2H), 4.16 (dd, J = 14.8,
2.0 Hz, 1H), 3.82 - 3.69 (m, 1H), 2.86 (ddd, J = 16.8, 9.3, 3.1 Hz, 1H), 2.79 - 2.68
(m, 1H), 2.29 (s, 1H), 2.12 - 2.03 (m, 1H).
Example 47: Preparation of (12S)-2,3-difluoro-7-hydroxy-6,8-dioxo-N-(2,4,6-trifluorobenzyl)-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]pyrido[1,2-a][1,4]diazonine-9-carboxamide
and (12R)-2,3-difluoro-7-hydroxy-6,8-dioxo-N-(2,4,6-trifluorobenzyl)-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]pyrido[1,2-a][1,4]diazonine-9-carboxamide
(50-1 and 50-2):
[0456]

Synthesis of 7,8-difluoro-1,3,4,5-tetrahydro-2H-benzo[b]azepin-2-one (50a):
[0457] To a solution of 6,7-difluoro-3,4-dihydronaphthalen-1(2H)-one (1 g, 5.49 mmol) in
methane sulfonic acid (7 mL), sodium azide (428 mg, 6.59 mmol) was added in three
portions in an ice- cooling bath over 15 min. After 30 min, water (100 mL) was added
and product precipitated out of solution. The solid was washed with water and dried,
to afford the title compound (
50a). MS (
m/
z) 198 [M+H]
+.
1H NMR (400 MHz, Chloroform-d) δ 7.88 (s, 1H), 7.04 (dd, J = 10.4, 8.4 Hz, 1H), 6.85
(dd, J = 10.5, 7.1 Hz, 1H), 2.75 (t, J = 7.2 Hz, 2H), 2.36 (t, J = 7.3 Hz, 2H), 2.22
(t, J = 7.3 Hz, 2H).
Synthesis of (12R)-7-(benzyloxy)-2,3-difluoro-6,8-dioxo-N-(2,4,6-trifluorobenzyl)-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]pyrido[1,2-a][1,4]diazonine-9-carboxamide and (12S)-7-(benzyloxy)-2,3-difluoro-6,8-dioxo-N-(2,4,6-trifluorobenzyl)-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]pyrido[1,2-a][1,4]diazonine-9-carboxamide
(50b-1 and 50b-2):
[0458] The title compounds were prepared in a manner analogous to
43g-1 and
43g-2, using 7,8-difluoro-1,3,4,5-tetrahydro-2H-benzo[b]azepin-2-one (
50a) in place of 6-fluoro-1,3,4,5-tetrahydro-2H-benzo[b]azepin-2-one.
Synthesis of (12S)- 2,3-difluoro-7-hydroxy-6,8-dioxo-N-(2,4,6-trifluorobenzyl)-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]pyrido[1,2-a][1,4]diazonine-9-carboxamide
and (12R)-2,3-difluoro-7-hydroxy-6,8-dioxo-N-(2,4,6-trifluorobenzyl)-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]pyrido[1,2-a][1,4]diazonine-9-carboxamide (50-1 and 50-2):
[0459] The title compounds were prepared in a manner analogous to
46-1 and
46-2, using (12R)-7-(benzyloxy)-2,3-difluoro-6,8-dioxo-N-(2,4,6-trifluorobenzyl)-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]pyrido[1,2-a][1,4]diazonine-9-carboxamide
or (12S)-7-(benzyloxy)-2,3-difluoro-6,8-dioxo-N-(2,4,6-trifluorobenzyl)-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]pyrido[1,2-a][1,4]diazonine-9-carboxamide
(
50b-1 or
50b-2) in place of (S)- or (R)-3-(benzyloxy)-1-(9-fluoro-2,3,4,5-tetrahydro-1H-benzo[b]azepin-3-yl)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-1,4-dihydropyridine-2-carboxylate
(
46a-1 or
46a-2).
[0460] 50-1: MS (
m/
z) 488.1 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.31 (t, J = 6.0 Hz, 1H), 8.58 (s, 1H), 7.54 - 7.42 (m, 2H), 7.40 (d, J = 6.7
Hz, 1H), 7.22 (td, J = 9.9, 2.6 Hz, 1H), 7.05 (td, J = 8.6, 2.5 Hz, 1H), 4.89 (d,
J = 5.1 Hz, 1H), 4.55 (d, J = 5.8 Hz, 2H), 4.13 (d, J = 14.6 Hz, 1H), 3.76 (s, 1H),
2.79 (d, J = 8.1 Hz, 1H), 2.70 (d, J = 10.3 Hz, 1H), 2.24 (s, 1H), 2.07 (d, J = 8.6
Hz, 1H).
[0461] 50-2: MS
(m/
z) 488.1 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.31 (t, J = 5.9 Hz, 1H), 8.58 (s, 1H), 7.48 (dt, J = 11.6, 8.5 Hz, 2H), 7.39
(dd, J = 8.7, 6.7 Hz, 1H), 7.22 (td, J = 10.0, 2.6 Hz, 1H), 7.05 (td, J = 8.6, 2.5
Hz, 1H), 4.89 (s, 1H), 4.55 (d, J = 5.9 Hz, 2H), 4.13 (d, J = 14.6 Hz, 1H), 3.80 (d,
J = 2.0 Hz, 1H), 2.79 (d, J = 8.1 Hz, 1H), 2.75 - 2.62 (m, 1H), 2.24 (s, 1H), 2.13
- 2.00 (m, 1H).
Example 48: Preparation of (7S)-N-(3-chloro-2,4-difluorobenzyl)-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(51):
[0462]

[0463] To a solution of (7S)-12-methoxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxylic
acid (
39a, 100 mg, 0.31 mmol), (3-chloro-2,4-difluorophenyl)methanamine (82 mg, 0.46 mmol),
and triethylamine (0.128 mL, 0.924 mmol) in DCM (2 mL) was added HATU (152 mg, 0.400
mmol). The mixture was stirred at rt for 15 min, then the organic layer was rinsed
with 3 × 1 M HCl, 3 × 1 M NaOH, and 1 × sat aq NaHCO
3. The organics were dried over sodium sulfate, filtered, and concentrated to dryness.
The residue was dissolved in DMF (1 mL) and lithium chloride (261 mg, 6.16 mmol) was
added. The mixture was stirred at 100 °C for 30 minutes, then cooled to room temperature,
diluted with aqueous TFA, purified by preparative HPLC (MeCN/water with 0.1% TFA),
and lyophilized to provide the title compound (
51). MS (
m/
z) 438.9 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) δ 10.41 (s, 1H), 8.46 (s, 1H), 7.37 (td, J = 8.4, 6.1 Hz, 1H), 7.09 (td, J = 8.7,
1.8 Hz, 1H), 4.73 - 4.53 (m, 3H), 4.24 (ddd, J = 13.3, 9.3, 7.3 Hz, 1H), 3.91 (dt,
J = 14.7, 1.9 Hz, 1H), 3.60 (dd, J = 14.8, 1.8 Hz, 1H), 3.18 (ddd, J = 13.3, 7.2,
2.7 Hz, 1H), 2.09 - 1.99 (m, 3H), 1.89 - 1.59 (m, 2H), 1.38 - 1.09 (m, 1H).
Example 49: Preparation of (3R,7S)-N-(2,4-difluorobenzyl)-12-hydroxy-3-methyl-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide,
(3S,7R)-N-(2,4-difluorobenzyl)-12-hydroxy-3-methyl-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide,
(3R,7R)-N-(2,4-difluorobenzyl)-12-hydroxy-3-methyl-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide,
and (3S,7S)-N-(2,4-difluorobenzyl)-12-hydroxy-3-methyl-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(52-1, 52-2, 52-3, and 52-4):
[0464]

Synthesis of 7-methylazepan-2-one (52a):
[0465] The title compound was prepared in a manner analogous to
50a, using 2-methylcyclohexanone in place of 6,7-difluoro-3,4-dihydronaphthalen-1(2H)-one.
MS (
m/
z) 171.74 [M+H-C
4H
8]+.
Synthesis of tert-butyl ((syn)- and (trans)-7-methyl-2-oxoazepan-3-yl)carbamate (52b-1 and 52b-2)
[0466] The title compounds were prepared in a manner analogous to
43c, using 7-methylazepan-2-one (
52a) in place of 6-fluoro-1,3,4,5-tetrahydro-2H-benzo[b]azepin-2-one. Diastereoisomers
52b-1 and
52b-2 were separated via silica gel column chromatography.
52b-1: MS (m/z) 242.73 [M+H]
+;
52b-2: MS (m/z) 242.73 [M+H]
+.
Synthesis of benzyl ((3S,7R)-, (3R,7S)-, (3R,7R)-, and (3S,7S)-7-methyl-2-oxoazepan-3-yl)carbamate (52c-1a, 52c-1b, 52c-2b, and 52c-2b)
[0467] A suspension of
tert-butyl ((
Z)-7-methyl-2-oxoazepan-3-yl)carbamate (
52b-1, 480 mg, 1.981 mmol) in dichloromethane (2 mL) was stirred at rt as 4 N HCl in dioxane
(5 mL) was added. After 1 h, the reaction mixture was concentrated and dried under
vacuum. A mixture of the resulting residue, N-carbobenzoxyoxysuccinimide (598.3 mg,
2.401 mmol), and sodium carbonate (743.9 mg, 7.019 mmol) in dioxane (5 mL) and water
(5 mL) was stirred at rt. After 18 h, the reaction mixture was diluted with ethyl
acetate (~60 mL), and washed with water (~10 mL), and brine (~50 mL). The aqueous
layer was extracted with ethyl acetate (~60 mL). The organic fractions were washed
with brine, combined, dried over MgSO
4, and concentrated. The residue was purified by column chromatography on silica gel
eluting 0-100% ethyl acetate in hexane to get the racemic benzyl ((
Z)-7-methyl-2-oxoazepan-3-yl)carbamate. MS (
m/
z) 276.94 [M+H]
+.
[0468] Benzyl (
(Z)-7-methyl-2-oxoazepan-3-yl)carbamate was separated into its individual enantiomers
by preparative SFC chromatography on an AZ-H column using ethanoltrifluoroacetic acid
co-solvent to provide benzyl ((
3S,7R)-7-methyl-2-oxoazepan-3-yl)carbamate and benzyl (
3R,
7S)-7-methyl-2-oxoazepan-3-yl)carbamate (
52c-1a and
52c-1b).
[0469] Benzyl ((
3R, 7R)-7-methyl-2-oxoazepan-3-yl)carbamate and benzyl (
3S, 7S)-7-methyl-2-oxoazepan-3-yl)carbamate (
52c-2a, and
52c-2b) were prepared in a similar manner from ((
E)-7-methyl-2-oxoazepan-3-yl)carbamate (
52b-2).
Synthesis of (3S,7R)-N-(2,4-difluorobenzyl)-12-hydroxy-3-methyl-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide,
(3R,7S)-N-(2,4-difluorobenzyl)-12-hydroxy-3-methyl-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide,
(3R,7R)-N-(2,4-difluorobenzyl)-12-hydroxy-3-methyl-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide,
and (3S,7S)-N-(2,4-difluorobenzyl)-12-hydroxy-3-methyl-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,41diazonine-10-carboxamide
(52-1, 52-2, 52-3, and 52-4)
[0470] A solution of benzyl (
3R,
7S)-7-methyl-2-oxoazepan-3-yl)carbamate (
52c-2b, 244 mg, 0.883 mmol) in tetrahydrofuran (6 mL) was stirred in ice bath as 1 M borane-THF
complex in THF (7.1 mL, 7.1 mmol) was added. The solution was stirred at rt. After
20 h, the reaction mixture was stirred in ice bath, diluted with ethyl acetate (10
mL) and methanol (7-8 mL) was slowly added. After 5 min, the mixture was concentrated
to 3 mL, diluted with ethyl acetate (30 mL) and washed with saturated sodium bicarbonate
(30 mL) and water. The aqueous fractions were extracted with ethyl acetate (30 mL),
the organic fractions were combined, dried over MgSO
4, and concentrated.
[0471] The crude amine was dissolved in ethanol (5 mL), and 10% palladium on carbon (38.8
mg) was added. The resulting mixture was stirred under H
2 atmosphere for 1 h. The mixture was filtered through celite, the pad washed with
ethanol, and the filtrate concentrated to get the crude diamine.
[0472] A mixture of methyl 3-(benzyloxy)-5-((2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate
(385.8 mg, 0.846 mmol), the crude diamine, and sodium bicarbonate (171.5 mg, 2.042
mmol) in water (2 mL) and methanol (10 mL) was stirred at rt overnight, and then at
50 °C for 2 h. The reaction mixture was concentrated to remove most of the solvent
and diluted with ethyl acetate (40 mL) and brine (40 mL), and two fractions were separated.
The aqueous layer was extracted with ethyl acetate (40 mL), and combined organic layer
was washed with brine, dried over MgSO
4, and concentrated. To the solution of the residue in methanol (10 mL) was added IN
lithium hydroxide (5 mL) and the resulting mixture was stirred in 50 °C bath for 1
h. The reaction mixture was neutralized with 2 N HCl (~2.5 mL), concentrated to remove
methanol, and the remained aqueous residue was diluted with water before extracting
with ethyl acetate (40 mL x 2). The organic extracts were washed with brine (x 1),
combined, dried (MgSO
4) and concentrated. The residue was purified by column chromatography on silica gel
eluting 0-6% methanol in dichloromethane to get (3
S,
7R)-12-(benzyloxy)-N-(2,4-difluorobenzyl)-3-methyl-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide.
MS (
m/
z) 508.20 [M+H]
+.
[0473] (
3S,
7R)-12-(Benzyloxy)-N-(2,4-difluorobenzyl)-3-methyl-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(238.4 mg, 0.470 mmol) was dissolved in toluene (1 mL) and trifluoroacetic acid (4
mL) and stirred at rt for 30 min. The reaction mixture was concentrated and the residue
was purified by preparative HPLC, eluting 20-53% acetonitrile (0.1% trifluoroacetic
acid) in water (0.1% trifluoroacetic acid)) followed by freeze-drying to afford (
3R,
7S)-N-(2,4-difluorobenzyl)-12-hydroxy-3-methyl-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(52-1).
[0474] (
3S,
7R)-N-(2,4-difluorobenzyl)-12-hydroxy-3-methyl-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide,
(
3R,
7R)-N-(2,4-difluorobenzyl)-12-hydroxy-3-methyl-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyndo[1,2-a][1,4]diazonine-10-carboxamide,
and (
3S,
7S)-N-(2,4-difluorobenzyl)-12-hydroxy-3-methyl-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(52-2, 52-3, and
52-4) were prepared in an analogous manner from benzyl (3R,
7S)-7-methyl-2-oxoazepan-3-yl)carbamate, benzyl (
3R,
7R)-7-methyl-2-oxoazepan-3-yl)carbamate, and benzyl (
3S,
7S)-7-methyl-2-oxoazepan-3-yl)carbamate (
52c-1b,
52c-2b, and
52c-2b)
, respectively.
[0475] 52-1: MS
(m/
z) 418.23 [M+H]
+.
1H NMR (400 MHz, Methanol-d
4) δ 8.43 (s, 1H), 7.52 - 7.28 (m, 1H), 7.05 - 6.80 (m, 2H), 4.61 (s, 3H), 3.92 (d,
J = 14.7 Hz, 1H), 3.68 (dd, J = 14.8, 2.6 Hz, 1H), 3.53 (s, 1H), 2.64 (dd, J = 16.0,
7.9 Hz, 1H), 2.09 - 1.95 (m, 1H), 1.84 - 1.72 (m, 3H), 1.76 (d, J = 7.1 Hz, 3H), 1.59
- 1.43 (m, 1H).
19F NMR (376 MHz, Methanol-d
4) δ - 114.00 (q, J = 7.8 Hz), -116.90 (q, J = 8.8 Hz).
[0476] 52-2: MS (
m/
z) 418.23 [M+H]
+.
1H NMR (400 MHz, Methanol-d
4) δ 8.43 (s, 1H), 7.41 (q, J = 8.2 Hz, 1H), 6.93 (q, J = 9.5, 9.1 Hz, 2H), 4.61 (s,
3H), 3.92 (d, J = 14.9 Hz, 1H), 3.68 (dd, J = 14.9, 2.6 Hz, 1H), 3.61 - 3.49 (m, 1H),
2.64 (dd, J = 16.1, 7.9 Hz, 1H), 2.03 (t, J = 7.4 Hz, 1H),1.86 - 1.72 (m, 3H), 1.76
(d, J = 7.1 Hz, 3H), 1.52 (s, 1H).
19F NMR (376 MHz, Methanol-d
4) δ -113.99 (t, J = 7.9 Hz), -116.90 (q, J = 8.6 Hz).
[0477] 52-3: MS (
m/
z) 418.24 [M+H]
+.
1H NMR (400 MHz, Methanol-d
4) δ 8.46 (s, 1H), 7.41 (td, J = 8.5, 6.4 Hz, 1H), 7.03 - 6.83 (m, 2H), 4.67 (s, 1H),
4.62 (s, 2H), 4.57 (ddd, J = 13.3, 8.7, 5.4 Hz, 1H), 3.74 (s, 2H), 2.15 (td, J = 15.9,
15.1, 8.0 Hz, 2H), 2.01 - 1.85 (m, 1H), 1.74 (ddt, J = 15.4, 7.7, 4.0 Hz, 1H), 1.52
(dt, J = 14.8, 11.1 Hz, 1H), 1.27 (d, J = 6.7 Hz, 3H), 1.23 - 1.07 (m, 1H).
19F NMR (376 MHz, Methanol-d
4) δ -78.26, -113.94 (ddd, J = 15.4, 8.7, 6.9 Hz), - 116.87 (q, J = 8.4 Hz).
[0478] 52-4: MS (
m/
z) 418.23 [M+H]
+.
1H NMR (400 MHz, Methanol-d
4) δ 8.46 (s, 1H), 7.41 (td, J = 8.5, 6.3 Hz, 1H), 7.02 - 6.84 (m, 2H), 4.72 - 4.63
(m, 1H), 4.61 (s, 2H), 4.60 - 4.52 (m, 1H), 3.75 (t, J = 1.6 Hz, 2H), 2.15 (td, J
= 15.7, 14.9, 7.9 Hz, 2H), 1.93 (ddt, J = 18.8, 15.6, 4.3 Hz, 1H), 1.74 (ddt, J =
15.3, 7.7, 3.9 Hz, 1H), 1.51 (dt, J = 14.8, 11.1 Hz, 1H), 1.27 (d, J = 6.7 Hz, 3H),
1.22 - 1.04 (m, 1H).
19F NMR (376 MHz, Methanol-d
4) δ -78.28, -113.93 (ddd, J = 15.4, 8.5, 6.7 Hz), -116.86 (q, J = 8.4 Hz).
Example 50a: Preparation of (4R, 7S)-N-(2,4-difluorobenzyl)-4-fluoro-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
and (4S,7S)-N-(2,4-difluorobenzyl)-4-fluoro-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(53-1 and 53-2) (SDS1, diastereomer 1):
[0479]

Synthesis of benzyl (3S)-3-(((benzyloxy)carbonyl)amino)-6-hydroxyazepane-1-carboxylate
and benzyl (3S)-3-(((benzyloxy)carbonyl)amino)-5-hydroxyazepane-1-carboxylate (53a-1 and 53a-2):
[0480] To a solution of benzyl (S)-3-(((benzyloxy)carbonyl)amino)-2,3,4,7-tetrahydro-1H-azepine-1-carboxylate
(
42e-1, 6.0 g, 15.8 mmol) in THF (100 mL) at 0 °C, borane dimethyl sulfide complex (4.5
mL, 47.3 mmol) was added. The solution was allowed to warm to rt, stirred overnight,
and quenched with 2 M sodium hydroxide (9.5 mL) and hydrogen peroxide (2.7 mL, 78.9
mmol) at 0 °C, stirring for 3 hr. The peroxide was quenched with sodium thiosulfite.
The reaction was extracted twice with EtOAc, and the organic layer was dried over
sodium sulfate, concentrated, and purified by silica gel chromatography to give the
title compounds
(53a-1 and
53a-2), as a mixture of regioisomers. MS (
m/
z) 399.4 [M+H]
+.
Synthesis of benzyl (S)-3-(((benzyloxy)carbonyl)amino)-6-oxoazepane-1-carboxylate
(53b-1) and benzyl (S)-3-(((benzyloxy)carbonyl)amino)-5-oxoazepane-1-carboxylate (53b-2):
[0481] To a solution of the mixture of benzyl (3S)-3-(((benzyloxy)carbonyl)amino)-5-hydroxyazepane-1-carboxylate
and benzyl (3S)-3-(((benzyloxy)carbonyl)amino)-6-hydroxyazepane-1-carboxylate (
53a-1 and
53a-2, 4.2 g, 10.6 mmol) in DCM (100 mL) at 0 °C, was added Dess Martin periodinane (5.4
g, 12.8 mmol). The reaction was allowed to warm to rt, and stirred overnight. The
reaction was quenched with sat. sodium sulfite and extracted twice with EtOAc. The
organic layer was dried over sodium sulfate, concentrated, and purified by silica
gel chromatography to give
53b-1 as the earlier eluting isomer, and
53b-2 as the later.
53b-1: MS (
m/
z) 397.3 [M+H]
+;
53b-2: MS (
m/
z) 397.0 [M+H]
+.
Synthesis of benzyl (3S)-3-(((benzyloxy)carbonyl)amino)-6-hydroxyazepane-1-carboxylate
(53c-1):
[0482] A solution of benzyl (S)-3-(((benzyloxy)carbonyl)amino)-6-oxoazepane-1-carboxylate
(
53b-1, 400 mg, 1 mmol) and NaBH
4 (76 mg, 2 mmol) in methanol (10 mL) was stirred at rt for 1 hr. It was quenched with
saturated NH
4Cl and extracted twice with EtOAc. The organic layer was dried over sodium sulfate,
filtered, and concentrated, to give the title compound (
53c-1), which was used subsequently without further purification. MS (
m/
z) 399.3 [M+H]
+.
Synthesis of benzyl (3S,6R)- and (3S,6S)-3-(((benzyloxy)carbonyl)amino)-6-fluoroazepane-1-carboxylate (53d-1 and 53d-2):
[0483] To a solution of benzyl (3S)-3-(((benzyloxy)carbonyl)amino)-6-fluoroazepane-1-carboxylate
(
53c-1, 300 mg, 0.8 mmol) in DCM (10 mL) at 0 °C in a Teflon bottle was slowly added deoxofluor
(50% in toluene, 1.4 mL, 3.8 mmol). The mixture was allowed to warm to rt and stirred
overnight. The mixture was cooled to 0 °C, quenched with sat. sodium bicarbonate and
stirred for 15 minutes, before extracting twice with DCM. Organic layer was dried
over sodium sulfate and purified by silica gel chromatography to obtain the title
compounds, stereochemistry assigned arbitrarily.
53d-1: MS (
m/
z) 401.7 [M+H]
+;
53d-2: MS
(m/
z) 401.7 [M+H]
+.
Synthesis of (3S,6R)-6-fluoroazepan-3-amine and (3S,6S)-6-fluoroazepan-3-amine (53e-1 and 53e-2):
[0484] To a solution of (
3S,6R)-6-fluoroazepan-3-amine or (
3S,6S)-3-(((benzyloxy)carbonyl)amino)-6-fluoroazepane-1-carboxylate (
53d-1 or
53d-2, 82 mg, 0.2 mmol), in ethanol (8 mL), was added PdOH/C (28.8 mg, 0.04 mmol). The mixture
was sparged with N
2, and a balloon of H
2 was added. It was stirred 2 hr, then the mixture was filtered over Celite
®. Mixture was concentrated to give the title compounds (
53e-1 or
53e-2)
, which were used subsequently without further purification. MS (
m/
z) 133.7 [M+H]
+.
Synthesis of (4R,7S)-N-(2,4-difluorobenzyl)-4-fluoro-12-hydroxv-1,1-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
and (4S,7S)-N-(2,4-difluorobenzyl)-4-fluoro-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(53-1 and 53-2):
[0485] The title compounds were prepared analogously to
44-1 and
44-2, using (
3S,6R)-6-fluoroazepan-3-amine and (
3S,6S)-6-fluoroazepan-3-amine (
53e-1 and
53e-2) in place of benzyl (R,Z)-3-(((benzyloxy)carbonyl)amino)-3,4,7,8-tetrahydroazocine-1(2H)-carboxylate
or benzyl (S,Z)-3-(((benzyloxy)carbonyl)amino)-3,4,7,8-tetrahydroazocine-1(2H)-carboxylate
(
44a-2 and
44b-2)
.
[0486] 53-1: MS (
m/
z) 422.2 [M+H]
+.
1H NMR (400 MHz, Chloroform-
d) δ 10.45 (s, 1H), 8.52 (s, 1H), 7.43 - 7.34 (m, 1H), 6.91 - 6.76 (m, 2H), 5.31 -
5.11 (m, 1H), 4.78 - 4.61 (m, 1H), 4.70 - 4.66 (m, 2H), 4.53 (s, 1H), 4.02 (d, 1H),
3.80 - 3.72 (m, 1H), 3.49 (dd, 1H), 2.55 - 2.40 (m, 1H), 2.38 - 2.25 (m, 1H), 2.14
- 2.00 (m, 1H), 1.68 - 1.41 (m, 1H).
[0487] 53-2: MS
(m/
z) 422.2 [M+H]
+.
1H NMR (400 MHz, Chloroform-
d) δ 10.50 (t, 1H), 8.51 (s, 1H), 7.42 - 7.32 (m, 1H), 6.88 - 6.75 (m, 2H), 5.13 -
4.91 (m, 1H), 4.86 - 4.73 (m, 1H), 4.72 - 4.59 (m, 2H), 4.58 - 4.47 (m, 1H), 4.00
(dd, 1H), 3.49 (dd, 1H), 3.29 (ddd, 1H), 2.47 - 2.33 (m, 1H), 2.31 - 2.20 (m, 1H),
2.13 - 1.99 (m, 1H), 1.98 - 1.84 (m, 1H).
Example 50b: Preparation of (4S,7R)-N-(2,4-difluorobenzyl)-4-fluoro-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
and (4R,7S)-N-(2,4-difluorobenzyl)-4-fluoro-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide (53-3 and 53-4):
[0488]

[0489] The title compounds were prepared analogously to
53-1 and
53-2, using benzyl (R)-3-(((benzyloxy)carbonyl)amino)-2,3,4,7-tetrahydro-1H-azepine-1-carboxylate
(42e-2) in place of benzyl (S)-3-(((benzyloxy)carbonyl)amino)-2,3,4,7-tetrahydro-1H-azepine-1-carboxylate
(
42e-1).
[0490] 53-3: MS (
m/
z) 422.2 [M+H]
+.
1H NMR (400 MHz, Chloroform-
d) δ 10.37 (t, 1H), 8.47 (s, 1H), 7.43 - 7.32 (m, 1H), 6.90 - 6.76 (m, 2H), 5.34 -
5.09 (m, 1H), 4.78 - 4.61 (m, 1H), 4.69 - 4.65 (m, 2H), 4.57 - 4.44 (m, 1H), 4.07
- 3.95 (m, 1H), 3.75 (dd, 1H), 3.49 (dd, 1H), 2.48 (dddd, 1H), 2.31 (ddt, 1H), 2.15
- 2.01 (m, 1H), 1.55 (dddd, 1H).
[0491] 53-4: MS (
m/
z) 422.2 [M+H]
+.
1H NMR (400 MHz, Chloroform-
d) δ 10.44 (s, 1H), 8.46 (s, 1H), 7.44 - 7.34 (m, 1H), 6.90 - 6.77 (m, 2H), 5.14 -
4.92 (m, 1H), 4.90 - 4.74 (m, 1H), 4.74 - 4.57 (m, 2H), 4.56 - 4.41 (m, 1H), 4.07
- 3.90 (m, 1H), 3.49 (dd, 1H), 3.29 (ddd, 1H), 2.46 - 2.32 (m, 1H), 2.32 - 2.15 (m,
1H), 2.15 - 1.80 (m, 2H).
Example 51: Preparation of (7S)-N-(2-fluoro-3-methoxybenzyl)-12-methoxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(54):
[0492]

[0493] The title compound was prepared from (7S)-12-methoxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxylic
acid (
51a) and (2-fluoro-3-methoxyphenyl)methanamine according to the method described for
compound
51. MS (
m/
z) 416.2 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) δ 10.19 (s, 1H), 8.44 (s, 1H), 7.11 (td, J = 7.9, 1.4 Hz, 1H), 7.03 (td, J = 8.2,
1.7 Hz, 1H), 6.99 - 6.90 (m, 1H), 4.67 - 4.57 (m, 3H), 4.25 (ddd, J = 13.3, 9.3, 7.4
Hz, 1H), 3.96 - 3.83 (m, 4H), 3.61 (dd, J = 14.8, 1.9 Hz, 1H), 3.18 (ddd, J = 13.3,
7.2, 2.7 Hz, 1H), 2.07 - 2.00 (m, 2H), 1.90 - 1.68 (m, 2H), 1.40 - 1.15 (m, 1H).
Example 52: Preparation of (12S)-2-fluoro-7-hydroxy-6,8-dioxo-N-(2,4,6-trifluorobenzyl)-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]pyrido[1,2-a][1,4]diazonine-9-carboxamide
and (12R)-2-fluoro-7-hydroxy-6,8-dioxo-N-(2,4,6-trifluorobenzyl)-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]
pyrido [1,2-a] [1,4]diazonine-9-carboxamide (55-1 and 55-2):
[0494]

[0495] The title compounds were prepared similarly to compounds
50-1 and
50-2 using 7-fluoro-1,3,4,5-tetrahydro-2H-benzo[b]azepin-2-one in place of 6-fluoro-1,3,4,5-tetrahydro-2H-benzo[b]azepin-2-one.
[0496] 55-1: MS
(m/
z) 470.1 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.32 (t, J = 5.9 Hz, 1H), 8.58 (s, 1H), 7.38 (td, J = 9.7, 8.8, 6.2 Hz, 2H),
7.23 (ddd, J = 9.5, 7.1, 2.8 Hz, 2H), 7.15 - 7.09 (m, 1H), 7.08 - 7.02 (m, 1H), 4.88
(d, J = 5.0 Hz, 1H), 4.55 (d, J = 5.9 Hz, 2H), 4.14 (d, J = 14.6 Hz, 1H), 3.72 (dd,
J = 14.7, 2.0 Hz, 1H), 2.85 - 2.76 (m, 1H), 2.70 (dd, J = 14.7, 12.0 Hz, 1H), 2.30
- 2.20 (m, 1H), 2.12 - 1.99 (m, 1H).
[0497] 55-2: MS (
m/
z) 470 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.32 (t, J = 5.9 Hz, 1H), 8.58 (s, 1H), 7.46 - 7.32 (m, 2H), 7.22 (ddt, J = 9.8,
5.9, 2.7 Hz, 2H), 7.16 - 7.07 (m, 1H), 7.08 - 6.99 (m, 1H), 4.88 (t, J = 2.5 Hz, 1H),
4.55 (d, J = 5.9 Hz, 2H), 4.14 (d, J = 14.5 Hz, 1H), 3.74 (d, J = 2.0 Hz, 1H), 2.80
(ddd, J = 10.8, 8.3, 4.0 Hz, 1H), 2.75 - 2.66 (m, 1H), 2.30 - 2.20 (m, 1H), 2.10 (t,
J = 6.8 Hz, 1H).
Example 53a: (5S,7S)-N-(2,4-difluorobenzyl)-5-fluoro-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
and (5R,7S)-N-(2,4-difluorobenzyl)-5-fluoro-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(56-1 and 56-2):
[0498]

[0499] The title compounds were synthesized in a manner similar to
53-1 and
53-2, using benzyl (S)-3-(((benzyloxy)carbonyl)amino)-5-oxoazepane-1-carboxylate (
53b-2) in place of benzyl (S)-3-(((benzyloxy)carbonyl)amino)-6-oxoazepane-1-carboxylate
(
53b-1), and separating the stereoisomers as the benzyl protected alcohol instead of prior
to amide coupling.
[0500] 56-1: MS (
m/
z) 422.3 [M+H]
+.
1H NMR (400 MHz, Chloroform-
d) δ 10.53 (t, 1H), 8.52 (s, 1H), 7.43 - 7.32 (m, 1H), 6.88 - 6.71 (m, 2H), 5.26 -
4.99 (m, 1H), 4.73 - 4.59 (m, 3H), 4.51 (ddd, 1H), 4.10 - 3.96 (m, 1H), 3.57 (dd,
1H), 3.27 (ddd, 1H), 2.57 - 2.42 (m, 2H), 2.38 - 2.24 (m, 1H), 2.24 - 2.05 (m, 1H).
[0501] 56-2: MS
(m/
z) 422.3 [M+H]
+.
1H NMR (400 MHz, Chloroform-
d) δ 10.33 (t, 1H), 8.46 (s, 1H), 7.42 - 7.32 (m, 1H), 6.92 - 6.75 (m, 2H), 5.02 -
4.84 (m, 1H), 4.74 - 4.61 (m, 2H), 4.61 - 4.48 (m, 2H), 4.03 - 3.94 (m, 1H), 3.81
(dd, 1H), 3.26 - 3.08 (m, 1H), 2.90 - 2.72 (m, 1H), 2.37 - 2.23 (m, 1H), 2.23 - 1.94
(m, 2H).
Example 53b: (5S,7R)-N-(2,4-difluorobenzyl)-5-fluoro-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
and (5R,7R)-N-(2,4-difluorobenzyl)-5-fluoro-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide (56-3 and 56-4):
[0502]

[0503] The title compounds were synthesized in a manner similar to
56-1 and
56-2, using benzyl (R)-3-(((benzyloxy)carbonyl)amino)-2,3,4,7-tetrahydro-1H-azepine-1-carboxylate
(
42e-2) in place of benzyl (S)-3-(((benzyloxy)carbonyl)amino)-2,3,4,7-tetrahydro-1H-azepine-1-carboxylate
(
42e-1), and separating the stereoisomers as the benzyl protected alcohol instead of prior
to amide coupling.
[0504] 56-3: MS (
m/
z) 422.1 [M+H]
+.
1H NMR (400 MHz, Chloroform-
d) δ 10.54 (t, 1H), 8.50 (s, 1H), 7.41 - 7.34 (m, 1H), 6.89 - 6.70 (m, 1H), 5.13 (dt,
1H), 4.76 - 4.62 (m, 2H), 4.60 - 4.46 (m, 2H), 4.04 (d, 1H), 3.57 (dd, 1H), 3.27 (ddd,
1H), 2.60 - 2.43 (m, 2H), 2.42 - 2.26 (m, 1H), 2.25 - 1.97 (m, 1H).
[0505] 56-4: MS (
m/
z) 422.2 [M+H]
+.
1H NMR (400 MHz, Chloroform-
d) δ 10.39 (s, 1H), 8.49 (s, 1H), 7.44 - 7.33 (m, 1H), 6.90 - 6.76 (m, 2H), 5.08 -
4.87 (m, 1H), 4.67 (d, 2H), 4.61 - 4.55 (m, 1H), 4.54 (d, 1H), 3.99 (dd, 1H), 3.82
(dd, 1H), 3.19 (dt, 1H), 2.90 - 2.72 (m, 1H), 2.40 - 2.23 (m, 1H), 2.23 - 2.13 (m,
1H), 2.13 - 1.87 (m, 1H).
Example 54: Preparation of (7'S)-N-(2,4-difluorobenzyl)-12'-hydroxy-1',11'-dioxo-1',4',5',11'-tetrahydro-3'H,7'H-spiro[cyclopropane-1,6'-[2,7]methanopyrido[1,2-a][1,4]diazonine]-10'-carboxamide
and (7'R)-N-(2,4-difluorobenzyl)-12'-hydroxy-1',11'-dioxo-1',4',5',11'-tetrahydro-3'H,7'H-spiro[cyclopropane-1,6'-[2,7]methanopyrido[1,2-a][1,4]diazonine]-10'-carboxamide
(57-1 and 57-2):
[0506]

Synthesis of benzyl 3-(((benzyloxy)carbonyl)amino)-4-methyleneazepane-1-carboxylate (57a):
[0507] To a suspension of methyltriphenylphosphonium bromide (1.44 g, 4.04 mmol) in anhydrous
THF (15 mL) in ice-water bath, was added potassium t-butoxide (368 mg, 3.28 mmol)
under nitrogen atmosphere. The resulting suspension was stirred at 0 °C for 30 min
then at room temperature for 10 min. A solution of benzyl 3-(benzyloxycarbonylamino)-4-oxoazepane-1-carboxylate
(
14c, 400 mg, 1.01 mmol) in THF (8 mL) was added. The reaction mixture was allowed to stir
for 1 h and brine was added to quench the reaction. It was extracted with ethyl acetate.
The organic layer was separated, dried over MgSO
4, filtered, and concentrated to dryness. The residue was purified by silica gel chromatography
eluting with ethyl acetate in hexane to afford the title product (
57a). MS (
m/
z) 395.66 [M+H]
+.
Synthesis of benzyl 4-(((benzyloxy)carbonyl)amino)-6-azaspiro[2.6]nonane-6-carboxylate
(57b):
[0508] A flask was charged with a solution of CH
2I
2 (1.97 g, 7.35 mmol) in anhydrous toluene (10 mL) under Argon at 0 °C. Diethylzinc
solution (5.88 mL, 5.88 mmol, 1.0 M in hexane) was added. The mixture was stirred
for 15 min, and a solution of benzyl 3-(benzyloxycarbonylamino)-4-methylene-azepane-1-carboxylate
(
57a, 290 mg, 0.735 mmol) in toluene (10 mL) was added. The reaction mixture was stirred
at room temperature for 3 days, then quenched with aqueous saturated NH
4Cl and extracted with ethyl acetate. The organic layer was separated, dried over Na
2SO
4 and concentrated to dryness. The residue was purified by silica gel chromatography
eluting with ethyl acetate in hexane to afford the title product (
57b). MS (
m/
z) 409.89 [M+H]
+.
Synthesis of 6-azaspiro[2.6]nonan-4-amine;dihydrochloride (57c):
[0509] Benzyl 4-(((benzyloxy)carbonyl)amino)-6-azaspiro[2.6]nonane-6-carboxylate (
57b, 95 mg, 0.233 mmol) was charged into in a sealed 40 mL pressure vial. To it was added
5 mL of HCl in dioxane (4 M). The reaction was heated to 95 °C overnight, and cooled
to room temperature. Solvent was removed to afford the title product (
57c). MS (
m/
z) 141.15 [M+H]
+.
Synthesis of 12'-(benzyloxy)-N-(2,4-difluorobenzyl)-1',11'-dioxo-1',4',5',11'-tetrahydro-3'H,7'H-spiro[cyclopropane-1,6'-[2,7]methanopyrido[1,2-a][1,4]diazonine]-10'-carboxamide
(57d):
[0510] The title product was prepared in a manner similar to
28a using 6-azaspiro[2.6]nonan-4-amine dihydrochloride (
57c) instead of 1,4-oxazepan-6-amine. MS (
m/
z) 520.20 [M+H]
+.
Synthesis of (7'S)-N-(2,4-difluorobenzyl)-12'-hydroxy-1',11'-dioxo-1',4',5',11'-tetrahydro-3'H,7'H-spiro[cyclopropane-1,6'-[2,7]methanopyrido[1,2-a][1,4]diazonine]-10'-carboxamide
and (7'R)-N-(2,4-difluorobenzyl)-12'-hydroxy-1',11'-dioxo-1',4',5',11'-tetrahydro-3'H,7'H-spiro[cyclopropane-1,6'-[2,7]methanopyrido[1,2-a][1,4]diazonine]-10'-carboxamide
(57-1 and 57-2):
[0511] 12'-(benzyloxy)-N-(2,4-difluorobenzyl)-1',11'-dioxo-1',4',5',11'-tetrahydro-3'H,7'H-spiro[cyclopropane-1,6'-[2,7]methanopyrido[1,2-a][1,4]diazonine]-10'-carboxamide
(
57d) was separated into its individual enantiomers by preparative SFC chromatography
on an OD-H column using MeOH cosolvent. The separated enantiomers were dissolved in
1 mL of Toluene and 1 mL of TFA and stirred at room temperature for 1 h. The reactions
were concentrated, and purified by RP-HPLC eluting with ACN/water (0.1% TFA) to provide
the title compounds.
[0512] 57-1: MS (
m/
z) 430.24 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.84 (s, 1H), 10.40 (t, J = 5.9 Hz, 1H), 8.42 (s, 1H), 7.41 (td, J = 8.7, 6.6
Hz, 1H), 7.26 (ddd, J = 10.5, 9.3, 2.6 Hz, 1H), 7.07 (tdd, J = 8.6, 2.6, 1.0 Hz, 1H),
4.55 (d, J = 5.9 Hz, 2H), 4.22 (dt, J = 13.2, 8.9 Hz, 1H), 4.04 (d, J = 2.2 Hz, 1H),
3.96 (dd, J = 14.6, 2.7 Hz, 1H), 3.75 (dd, J = 14.6, 1.8 Hz, 1H), 3.23 - 3.13 (m,
1H), 1.95 - 1.84 (m, 2H), 1.49 - 1.38 (m, 1H), 0.77 (qt, J = 10.6, 5.8 Hz, 3H), 0.55
- 0.39 (m, 2H).
[0513] 57-2: MS (
m/
z) 430.21 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.84 (s, 1H), 10.40 (t, J = 5.9 Hz, 1H), 8.42 (s, 1H), 7.42 (td, J = 8.7, 6.6
Hz, 1H), 7.26 (ddd, J = 10.5, 9.3, 2.6 Hz, 1H), 7.07 (tdd, J = 8.6, 2.6, 1.1 Hz, 1H),
4.55 (d, J = 5.8 Hz, 2H), 4.22 (dt, J = 13.2, 8.8 Hz, 1H), 4.04 (d, J = 2.2 Hz, 1H),
3.96 (dd, J = 14.5, 2.7 Hz, 1H), 3.75 (dd, J = 14.5, 1.8 Hz, 1H), 3.18 (ddd, J = 13.1,
6.8, 2.5 Hz, 1H), 1.95 - 1.84 (m, 2H), 1.49 - 1.38 (m, 1H), 0.85 - 0.70 (m, 3H), 0.52
- 0.39 (m, 2H).
Example 55: Preparation of (7S)-N-(3-chloro-2,4-difluorobenzyl)-12-hydroxy-1,11-dioxo-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide (58):
[0514]

Synthesis of (S)-2,3,4,7-tetrahydro-1H-azepin-3-amine (58a):
[0515] Benzyl (S)-3-(((benzyloxy)carbonyl)amino)-2,3,4,7-tetrahydro-1H-azepine-1-carboxylate
(42e-2, 648 mg, 1.70 mmol) was dissolved in HCl in dioxane (4 M, 8.5 mL) in a pressure vessel.
The mixture was stirred at 95 °C for 3 hours, cooled to rt, diluted with diethyl ether
(17 mL), and stirred for 5 minutes. The precipitate was collected by filtration, and
rinsed with additional ether to give the title compound (
58a), which was used subsequently without further purification.
Synthesis of (7S)-N-(3-chloro-2,4-difluorobenzyl)-12-hydroxy-1,11-dioxo-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(58):
[0516] The title compound was prepared analogously to
51, using (S)-2,3,4,7-tetrahydro-1H-azepin-3-amine (
58a) in place of (3S)-azepan-3-amine. MS (
m/
z) 436.2 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) δ 10.42 (s, 1H), 8.41 (s, 1H), 7.58 - 7.25 (m, 1H), 7.10 (td, J = 8.8, 1.9 Hz, 1H),
5.70 - 5.43 (m, 2H), 5.10 - 4.83 (m, 1H), 4.79 (ddt, J = 8.9, 4.4, 2.2 Hz, 1H), 4.63
(dd, J = 6.0, 1.4 Hz, 2H), 3.88 (dd, J = 14.3, 1.8 Hz, 1H), 3.82 - 3.61 (m, 2H), 3.22
- 2.94 (m, 1H), 2.49 - 2.37 (m, 1H).
Example 56: Preparation of (7S)-12-hydroxy-7-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
and (7R)-12-hydroxy-7-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(59-1 and 59-2):
[0517]

Synthesis of 1-(4-methoxybenzyl)azepan-3-one (59a):
[0518] PMB-Cl (0.653 g, 4.17 mmol) followed by DIPA (1.18 mL, 6.95 mmol) were added to a
suspension of azepan-3-one hydrochloride (0.52g, 3.48 mmol) in DCM (5 mL). The resulting
reaction mixture was stirred at room temperature overnight. Solvent was removed under
vacuo, and the residue was purified by silica gel column, to afford the title compound
(59a). MS (
m/
z) 234.2 [M+H]
+.
Synthesis of N-(1-(4-methoxybenzyl)azepan-3-ylidene)-2-methylpropane-2-sulfinamide
(59b):
[0519] To a solution of 1-(4-methoxybenzyl)azepan-3-one (
59a, 0.809 g, 3.47 mmol) and 2-methylpropane-2-sulfinamide (0.504 g, 4.16 mmol) in THF
(10 mL) was added titanium (IV) ethoxide (1.46 mL, 6.98 mmol) at room temperature,
and the resulting solution was stirred overnight. The reaction mixture was diluted
with ethyl acetate (10 mL), and quenched with aq. NaHCO
3 (5 mL). Then Celite was added, the solid was filtered off, and the filter cake was
washed with ethyl acetate (10 mL x 2). The combined solvent was concentrated under
vacuo, and the residue was purified by silica gel chromatography using EtOAc/Hexanes,
to afford the title compound (
59b). MS (
m/
z) 337.2 [M+H]
+.
Synthesis of N-(1-(4-methoxybenzyl)-3-methylazepan-3-yl)-2-methylpropane-2-sulfinamide
(59c):
[0520] 3 M MeMgBr (0.91 mL) was added dropwise to a solution of N-(1-(4-methoxybenzyl)azepan-3-ylidene)-2-methylpropane-2-sulfinamide
(
59b, 0.23 g, 0.68 mmol) in DCM at -78 °C, then the mixture was warmed to room temperature,
and stirred overnight. The reaction mixture was diluted with ethyl acetate and was
washed with sat. NH
4Cl and brine. The mixture was dried over MgSO
4, and the solvent was stripped off under vacuum. Crude material was purified by silica
gel column with ethyl acetate/hexane to afford the title compound (
59c). MS (
m/
z) 353.2 [M+H]
+.
Synthesis of 3-methylazepan-3-amine (59d):
[0521] 4 M HCl (1 mL) in dioxane was added to solution of N-(1-(4-methoxybenzyl)-3-methylazepan-3-yl)-2-methylpropane-2-sulfinamide
(
59c, 0.05 g, 0.142 mmol) in DCM (2 mL) at room temperature, and the reaction was stirred
for 2 h. The solvent was removed under vacuo, the crude material was dissolved in
EtOH (5 mL) and palladium on carbon 10 wt.% loading (dry basis), matrix carbon powder,
wet support (15 mg) was added. The resulting mixture was stirred at room temperature
for 1 h under N
2 to remove the trace amount of S containing by-product, and then black solid was filtered
off. Palladium on carbon 10 wt. % loading (dry basis), matrix carbon powder, wet support
(15 mg) was recharged to the solution and purged with H
2 (3X). Then the reaction mixture was stirred under H
2 for 2 h. Black solid was filtered off and solvent was removed under vacuo. The resulting
residue was used directly for next step. MS (
m/
z) 129.2 [M+H]
+.
Synthesis of 12-(benzyloxy)-7-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(59e):
[0522] To a mixture of 3-methylazepan-3-amine (
59d, 0.013 g, 0.1 mmol) and sodium bicarbonate (45.07 mg, 0.54 mmol) in MeOH (2 mL) and
H
2O (2 mL), was added methyl 3-benzyloxy-4-oxo-5-[(2,4,6-trifluorophenyl)methylcarbamoyl]pyran-2-carboxylate
(30 mg, 0.07 mmol) at room temperature. The mixture was stirred at 60 °C for 3 hours.
The reaction mixture was diluted with ethyl acetate, washed with H
2O and brine, and dried over MgSO
4. Solvent was removed under vacuo, and the residue was purified by silica gel column
chromatography to afford the title compound (
59e). MS (
m/
z) 526.2 [M+H]
+.
Synthesis of (7S)-12-hydroxy-7-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
and (7R)-12-hydroxy-7-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(59-1 and 59-2):
[0523] 12-(benzyloxy)-7-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(
59e, 0.03 g, 0.06 mmol) was dissolved in toluene (2 mL) and TFA (2 mL) was added. The
reaction mixture was stirred at room temperature for 1 hour. Solvent was removed under
vacuo and the residue was purified by HPLC to afford a racemic mixture. The mixture
was separated into its enantiomers by preparative SFC chromatography on an IA column
using methanol co-solvent to provide the title compounds
(59-1 and
59-2).
[0524] 59-1: MS (
m/
z) 436.1 [M+H]
+.
1H NMR (400 MHz, Methanol-d
4) 8.57 (s, 1H), 6.90 (m, 2H), 4.69 (s, 2H), 4.39 (m, 1H), 3.80 (m, 1H), 3.70 (m, 1H),
3.20 (m, 1H), 2.15 - 1.22 (m, 9H).
[0525] 59-2: MS (
m/
z) 436.1 [M+H]
+.
1H NMR (400 MHz, Methanol-d
4) 8.57 (s, 1H), 6.90 (m, 2H), 4.69 (s, 2H), 4.38 (m, 1H), 3.80 (m, 1H), 3.71 (m, 1H),
3.19 (m, 1H), 2.15 - 1.25 (m, 9H).
Example 57a: Preparation of (6S,7R)-N-(2,4-difluorobenzyl)-6-fluoro-12-hydroxy-6-methyl-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(60-1):
[0526]

Synthesis of benzyl (3R,4S)-3-(((benzyloxy)carbonyl)amino)-4-hydroxy-4-methylazepane-1-carboxylate
(60a-1) and benzyl (3R,4R)-3-(((benzyloxy)carbonyl)amino)-4-hydroxy-4-methylazepane-1-carboxylate
(60a-2):
[0527] To a flask was added methyl Grignard (3 M in Et
2O, 1.02 mL, 3.05 mmol) at 0 °C. A solution of benzyl (R)-3-(((benzyloxy)carbonyl)amino)-4-oxoazepane-1-carboxylate
(
14c-1, 302 mg, 0.76 mmol) in 3 mL THF was added slowly, the reaction was allowed to warm
to room temperature, and stirred for 1 h. It was then quenched with NH
4Cl (saturated aqueous solution) and extracted into ethyl acetate. The organic layer
was washed with brine, dried over MgSO
4, filtered, and concentrated to dryness. The residue was purified by silica gel chromatography
eluting with ethyl acetate in hexane to afford the title compounds (
60a-1 and
60a-2), with stereochemistry arbitrarily assigned. MS (
m/
z) 413.24 [M+H]
+.
Synthesis of benzyl (3R,4S)-3-(((benzyloxy)carbonyl)amino)-4-fluoro-4-methylazepane-1-carboxylate
(60b-2):
[0528] The title compound was prepared in a manner similar to
13a using benzyl (3R,4R)-3-(((benzyloxy)carbonyl)amino)-4-hydroxy-4-methylazepane-1-carboxylate
(
60a-2) instead of 12-(benzyloxy)-N-(2,4-difluorobenzyl)-6-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(
12a). MS (
m/
z) 415.78 [M+H]
+. The structure was confirmed by X-ray Crystallography.
Synthesis of (3R,4S)-4-fluoro-4-methylazepan-3-amine (60c-2):
[0529] Benzyl (3R,4S)-3-(((benzyloxy)carbonyl)amino)-4-fluoro-4-methylazepane-1-carboxylate
(
60b-2, 110 mg, 0.265 mmol) was dissolved in 20 mL of absolute ethanol and was sparged under
an argon atmosphere. Palladium hydroxide on carbon (37.3 mg, 0.05 mmol, 20% Pd weight)
was added and the mixture was sparged under a hydrogen atmosphere (1 atm, balloon).
The mixture was stirred vigorously for 1 day and sparged under an argon atmosphere.
[0530] It was filtered through a pad of Celite
®. The filter cake was washed with absolute ethanol, and the filtrate was concentrated
in vacuo to afford the title compound (
60c-2). MS (m/z) 147.23 [M+H]
+.
Synthesis of (6S,7R)-N-(2,4-difluorobenzyl)-6-fluoro-12-hydroxy-6-methyl-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(60-1):
[0531] The title compound was prepared in a manner similar to compound
28 using (3R,4S)-4-fluoro-4-methylazepan-3-amine
(60c-2) instead of 1,4-oxazepan-6-amine. MS (
m/
z) 436.18 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.68 (s, 1H), 10.34 (t, J = 5.9 Hz, 1H), 8.43 (d, J = 1.9 Hz, 1H), 7.41 (td,
J = 8.7, 6.6 Hz, 1H), 7.25 (ddd, J = 10.5, 9.3, 2.6 Hz, 1H), 7.07 (td, J = 8.6, 2.6
Hz, 1H), 4.82 (s, 1H), 4.56 (d, J = 5.9 Hz, 2H), 4.19 (dt, J = 13.2, 8.4 Hz, 1H),
3.96 (ddd, J = 15.4, 6.3, 3.0 Hz, 1H), 3.75 (d, J = 15.3 Hz, 1H), 3.16 - 3.06 (m,
1H), 1.95 - 1.68 (m, 3H), 1.63 (d, J = 23.8 Hz, 3H), 1.39 (td, J = 13.8, 12.7, 5.2
Hz, 1H).
Example 57b: Preparation of (6S, 7S)-N-(2,4-difluorobenzyl)-6-fluoro-12-hydroxy-6-methyl-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
and (6R, 7S)-N-(2,4-difluorobenzyl)-6-fluoro-12-hydroxy-6-methyl-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(60-2 and 60-3):
[0532]

Synthesis of benzyl (3S,4R)-3-(((benzyloxy)carbonyl)amino)-4-hydroxy-4-methylazepane-1-carboxylate and benzyl
(3S,4S)-3-(((benzyloxy)carbonyl)amino)-4-hydroxy-4-methylazepane-1-carboxylate (60a-3 and 60a-4):
[0533] The title compounds were prepared in a manner similar to benzyl (
3R,4S)-3-(((benzyloxy)carbonyl)amino)-4-hydroxy-4-methylazepane-1-carboxylate (
60a-1) using benzyl (S)-3-(((benzyloxy)carbonyl)amino)-4-oxoazepane-1-carboxylate (
14c-2) instead of benzyl (
R)-3-(((benzyloxy)carbonyl)amino)-4-oxoazepane-1-carboxylate (
14c-1). MS (
m/
z) 415.52 [M+H]
+.
Synthesis of (6S,7S)- and (6R,7S)-N-(2,4-difluorobenzyl)-6-fluoro-12-hydroxy-6-methyl-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(60-2 and 60-3):
[0534] The title compounds were prepared in a manner similar to
60-1 using benzyl (
3S,4R) 3-(((benzyloxy)carbonyl)amino)-4-hydroxy-4-methylazepane-1-carboxylate - or benzyl
(
3S,4S)-3-(((benzyloxy)carbonyl)amino)-4-hydroxy-4-methylazepane-1-carboxylate (
60a-3 or
60a-4) instead of benzyl (3R,4R)-3-(((benzyloxy)carbonyl)amino)-4-hydroxy-4-methylazepane-1-carboxylate
(
60a-2).
[0535] 60-2: MS (
m/
z) 436.16 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.80 (s, 1H), 10.34 (t, J = 6.0 Hz, 1H), 8.65 (s, 1H), 7.47 - 7.36 (m, 1H), 7.26
(td, J = 9.9, 2.6 Hz, 1H), 7.08 (td, J = 8.6, 2.6 Hz, 1H), 4.81 (d, J = 11.5 Hz, 1H),
4.56 (d, J = 5.9 Hz, 2H), 4.16 (q, J = 11.3 Hz, 1H), 3.92 (dd, J = 15.3, 2.5 Hz, 1H),
3.80 (d, J = 14.9 Hz, 1H), 3.16 (dd, J = 12.9, 7.7 Hz, 1H), 2.17 - 2.04 (m, 1H), 1.91
(dd, J = 14.9, 7.1 Hz, 1H), 1.74 (dd, J = 15.0, 7.6 Hz, 1H), 1.50 - 1.21 (m, 4H).
[0536] 60-3: MS (
m/
z) 436.17 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.68 (s, 1H), 10.34 (t, J = 5.9 Hz, 1H), 8.43 (d, J = 2.0 Hz, 1H), 7.41 (td,
J = 8.6, 6.6 Hz, 1H), 7.26 (ddd, J = 10.6, 9.4, 2.6 Hz, 1H), 7.12 - 7.02 (m, 1H),
4.82 (s, 1H), 4.56 (d, J = 5.8 Hz, 2H), 4.19 (dt, J = 13.1, 8.4 Hz, 1H), 3.96 (ddd,
J = 15.3, 6.3, 3.0 Hz, 1H), 3.75 (d, J = 15.3 Hz, 1H), 3.16 - 3.05 (m, 1H), 2.00 -
1.68 (m, 3H), 1.63 (d, J = 23.8 Hz, 3H), 1.49 - 1.26 (m, 1H).
Example 58: Preparation of (6S, 7S)-6-fluoro-12-hydroxy-6-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
and (6R, 7S)-6-fluoro-12-hydroxy-6-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(61-1 and 61-2):
[0537]

[0538] The title compounds were prepared in a similar manner to
60-2 and
60-3 using methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate
instead of methyl 3-(benzyloxy)-5-((2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate.
[0539] 61-1: MS (
m/
z) 454.19 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.80 (s, 1H), 10.36 (t, J = 5.8 Hz, 1H), 8.63 (s, 1H), 7.22 (t, J = 8.6 Hz, 2H),
4.79 (d, J = 11.5 Hz, 1H), 4.57 (d, J = 5.7 Hz, 2H), 4.22 - 4.09 (m, 1H), 3.90 (dd,
J = 15.0, 2.5 Hz, 1H), 3.79 (d, J = 15.0 Hz, 1H), 3.15 (dd, J = 13.0, 7.7 Hz, 1H),
2.10 (q, J = 11.4 Hz, 1H), 1.91 (dt, J = 15.6, 6.5 Hz, 1H), 1.73 (dt, J = 14.3, 6.6
Hz, 1H), 1.44 - 1.23 (m, 4H).
[0540] 61-2: MS (
m/
z) 454.19 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.63 (s, 1H), 10.36 (t, J = 5.8 Hz, 1H), 8.41 (d, J = 2.0 Hz, 1H), 7.27 - 7.17
(m, 2H), 4.80 (s, 1H), 4.57 (d, J = 5.7 Hz, 2H), 4.18 (dt, J = 13.2, 8.4 Hz, 1H),
3.94 (ddd, J = 15.3, 6.2, 3.0 Hz, 1H), 3.74 (d, J = 15.4 Hz, 1H), 3.10 (td, J = 8.3,
3.8 Hz, 1H), 1.84 (ddt, J = 33.9, 13.2, 7.2 Hz, 3H), 1.62 (d, J = 23.8 Hz, 3H), 1.38
(t, J = 15.3 Hz, 1H).
Example 59: Preparation of (7S)-N-(2,3-dichloro-4-fluorobenzyl)-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide (62):
[0541]

Synthesis of (2,3-dichloro-4-fluorophenyl)methanamine (62a)
[0542] A solution of NH
2OH-HCl (6.95 g, 0.1 mol) and KHCO
3 (5 g, 0.05 mol) in 250 mL water was made. 5.2 mL of the solution was slowly added
to 2,3-dichloro-4-fluorobenzaldehyde (1 g, 5 mmol) in ethanol (20 mL). It was stirred
for 20 min, an equal volume of water was added (20 mL), and the solid was filtered
off. The supernatant was dried to give (Z)-2,3-dichloro-4-fluorobenzaldehyde oxime,
which was used as is in the next reaction. MS (
m/
z) 208.1 [M+H]
+.
[0543] Zinc powder (1.3 g, 19.2 mmol) was added to a solution of (Z)-2,3-dichloro-4-fluorobenzaldehyde
oxime (1g, 4.8 mmol) in water (1 mL) and TFA (3 mL). The reaction was stirred for
6 hr. Solids were filtered off, and supernatant diluted with EtOAc, followed by sat.
NaHCO
3 until basic. The mixture was extracted twice with EtOAc, then organic layer was dried
over sodium sulfate, filtered, and concentrated to obtain the title compound (
62a) which was carried to the next step without further purification. MS (
m/
z) 194.0 [M+H]
+.
1H NMR (400 MHz, Chloroform-
d) δ 7.37 - 7.32 (m, 1H), 7.11 (t, 1H), 3.97 (s, 1H), 1.59 (s, 2H).
Synthesis of (7S)-N-(2,3-dichloro-4-fluorobenzyl)-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide (62)
[0544] The title compound was prepared analogously to compound
51, using (2,3-dichloro-4-fluorophenyl)methanamine (
62a) in place of (3-chloro-2,4-difluorophenyl)methanamine. MS (
m/
z) 454.1 [M+H]
+.
1H NMR (400 MHz, Chloroform-
d) δ 10.72 - 10.57 (m, 1H), 8.44 (s, 1H), 7.35 (dd, 1H), 7.07 (t, 1H), 4.82 - 4.61
(m, 2H), 4.51 - 4.35 (m, 2H), 4.07 - 3.90 (m, 1H), 3.54 (dd, 1H), 3.18 (ddd, 1H),
2.22 - 1.95 (m, 3H), 1.94 - 1.75 (m, 2H), 1.45 - 1.33 (m, 1H).
Example 60: Preparation of (13S)-4-hydroxy-3,5-dioxo-N-(2,4,6-trifluorobenzyl)-3,5,8,13-tetrahydro-7H-6,13-methanobenzo[g]pyrido[1,2-a][1,4]diazonine-2-carboxamide
and (13R)-4-hydroxy-3,5-dioxo-N-(2,4,6-trifluorobenzyl)-3,5,8,13-tetrahydro-7H-6,13-methanobenzo[g]pyrido[1,2-a][1,4]diazonine-2-carboxamide
(63-1 and 63-2):
[0545]

Synthesis of 4-methyl-N-phenethylbenzenesulfonamide (63a):
[0546] To a stirred solution of 2-phenylethan-1-amine (14.55 g, 120 mmol) and Et
3N (33 mL, 237 mmol) in DCM (120 mL) under argon at 0 °C, was added
p-toluenesulfonyl chloride (23.3 g, 122.2 mmol) portion-wise. After addition, the reaction
was stirred under argon at 30 °C for 7 h. The reaction mixture was diluted with water
(200 mL), and the organic layer was separated. The aqueous layer was extracted with
DCM (2x) and the combined organic extracts were concentrated. The residue was dried
under vacuo and dissolved in DCM (300 mL), washed with aq. HCl (0.5 M, 100 mL), brine
(100 mL), dried over anhydrous Na
2SO
4 and filtered. The filtrate was concentrated to give the title compound (
63a), which was further used without further purification. MS (
m/
z) 276.3 [M+H]
+.
Synthesis of ethyl N-phenethyl-N-tosylglycinate (63b):
[0547] To a stirred solution of 4-methyl-N-phenethylbenzenesulfonamide (
63a, 33.8 g, 120 mmol) in acetone (360 mL) under argon at room temperature were added
K
2CO
3 (49.8 g, 360 mmol) and ethyl 2-bromoacetate (15.3 mL, 138 mmol). The reaction was
stirred under argon at 75 °C for 18 h. The cooled reaction mixture was concentrated.
The residue was suspended in water (150 mL) and extracted with EtOAc (3x). The combined
organic extracts were washed with brine (100 mL), dried over anhydrous Na
2SO
4 and filtered. The filtrate was concentrated to give the title compound (
63b), which was further used without further purification. MS
(m/
z) 362.3 [M+H]
+.
Synthesis of N-phenethyl-N-tosylglycine (63c):
[0548] To a stirred mixture of ethyl N-phenethyl-N-tosylglycinate (
63b, 47.1 g, 120 mmol) in EtOH/H
2O (120 mL/200 mL) at room temperature, was added NaOH (12.0 g, 300 mmol). The resulting
suspension was stirred at 50 °C for 3 h. The reaction mixture was concentrated to
remove most of the EtOH, cooled to 0 °C, and conc. HCl (30 mL) was added dropwise.
The solid precipitate was collected by filtration, rinsed with water (100 mL) and
petroleum ether (100 mL), dissolved in EtOAc (500 mL), washed with brine (100 mL),
dried over anhydrous Na
2SO
4, and filtered. The filtrate was concentrated to give the title compound (
63c), which was used without further purification. MS (
m/
z) 334.2 [M+H]
+.
Synthesis of 3-tosyl-2,3,4,5-tetrahydro-1H-benzo[d]azepin-1-one (63d):
[0549] To a stirred solution of N-phenethyl-N-tosylglycine (
63c, 41.3 g, 120 mmol) in DCM (300 mL) under argon at room temperature, were added SOCl
2 (43 mL, 593 mmol) and DMF (0.3 mL). The reaction was stirred under argon at 40 °C
for 12 h. The reaction mixture was concentrated to dryness, and then dried under high
vacuum for 30 minutes. The residue was dissolved in dry DCM (400 mL) under argon,
and cooled to -20 °C. AlCl
3 (56 g, 420 mmol) was added portion wise. After addition, the reaction was stirred
at room temperature for 1 h and then at 30 °C overnight. The cooled reaction mixture
was poured into aq. HCl (6 M, 200 mL), which had been cooled to -20 °C. The resulting
mixture was extracted with DCM (200 mL, 2x) and the combined organic extracts were
washed with aq. HCl (1 M, 200 mL), brine (100 mL), dried over anhydrous Na
2SO
4, and filtered. The filtrate was concentrated, and the residue purified by silica
gel chromatography (20-50% EtOAc/PE, then 50% EtOAc/DCM) to afford the title compound
(63d). MS (
m/
z) 316.3 [M+H]
+.
Synthesis of 3-tosyl-2,3,4,5-tetrahydro-1H-benzo[d]azepin-1-one (63e):
[0550] To a stirred suspension of 3-tosyl-2,3,4,5-tetrahydro-1H-benzo[d]azepin-1-one (
63d, 20.0 g, 63.4 mmol) in
i-PrOH (630 mL) under argon at room temperature, was added NH
4OAc (98 g, 1271 mmol). NaBH
3CN (19.95 g, 317.5 mmol) was then added portionwise. The reaction was stirred under
argon at 85 °C overnight. The cooled reaction mixture was quenched with water (300
mL), followed by aqueous NaOH (2 M, 100 mL). The suspension was concentrated under
reduced pressure to remove most of
i-PrOH. The resulting suspension was diluted with DCM (200 mL), filtered, and the filter
cake washed with DCM (100 mL). The filter cake was dissolved in MeOH (200 mL), and
aq. HCl (3 M, 100 mL) was added dropwise with stirring at room temperature. After
addition, the resulting solution was stirred at room temperature overnight. MeOH (100
mL) was added followed by aqueous NaOH (2 M), until pH equaled 11. The resulting mixture
was concentrated to remove MeOH, diluted with water (300 mL) and extracted with DCM
(300 mL, 2x). The combined organic extracts were filtered through a pad of anhydrous
Na
2SO
4 and concentrated to give the title compound, which was used without further purification.
MS (
m/
z) 317.3 [M+H]
+.
Synthesis of 2,3,4,5-tetrahydro-1H-benzo[d]azepin-1-amine dihydrobromide (63f):
[0551] A mixture of 3-tosyl-2,3,4,5-tetrahydro-1H-benzo[d]azepin-1-amine (
63e, 11.55 g, 36.5 mmol) and HBr (33 wt% in AcOH) (110 mL) was stirred under argon at
75 °C overnight. The cooled reaction mixture was diluted with EtOAc (1 L), stirred
at room temperature for 30 minutes and filtered. The filter cake was washed with EtOAc
(100 mL), collected, and dried under vacuo to afford the title compound (
63f), which was used without further purification. MS
(m/
z) 163.5 [M+H]
+.
Synthesis of 4-(benzyloxy)-3,5-dioxo-N-(2,4,6-trifluorobenzyl)-3,5,8,13-tetrahydro-7H-6,13-methanobenzo[g]pyrido[1,2-a][1,4]diazonine-2-carboxamide
(63g):
[0552] To a suspension of methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate
(0.20 g, 0.45 mmol) and 2,3,4,5-tetrahydro-1H-benzo[d]azepin-1-amine dihydrobromide
(
63f, 0.145 g, 0.45 mmol) in 6:1 MeOH/H
2O (14 mL) was added NaHCO
3 (0.376 g, 4.47 mmol). The suspension was stirred overnight at room temperature. The
reaction mixture was concentrated and re-dissolved in EtOAc and H
2O. The organic phase was separated, and the aqueous phase was extracted with EtOAc
(2x). The combined organic phases were dried over Na
2SO
4, filtered, and concentrated. The residue was purified by column chromatography (25-100%
EtOAc/hexanes) to afford the title compound (
63g). MS (
m/
z) 560.07 [M+H]
+.
Synthesis of (13S)-4-hydroxy-3,5-dioxo-N-(2,4,6-trifluorobenzyl)-3,5,8,13-tetrahydro-7H-6,13-methanobenzo[g]pyrido[1,2-a][1,4]diazonine-2-carboxamide and (13R)-4-hydroxy-3,5-dioxo-N-(2,4,6-trifluorobenzyl)-3,5,8,13-tetrahydro-7H-6,13-methanobenzo[g]pyrido[1,2-a][1,4]diazonine-2-carboxamide
(63-1 and 63-2):
[0553] 4-(benzyloxy)-3,5-dioxo-N-(2,4,6-trifluorobenzyl)-3,5,8,13-tetrahydro-7H-6,13-methanobenzo[g]pyrido[1,2-a][1,4]diazonine-2-carboxamide
(
63g) was separated into its individual enantiomers by preparative SFC on an OD-H column
using 50% EtOH co-solvent to provide (13S)-4-(benzyloxy)-3,5-dioxo-N-(2,4,6-trifluorobenzyl)-3,5,8,13-tetrahydro-7H-6,13-methanobenzo[g]pyrido[1,2-a][1,4]diazonine-2-carboxamide
as the first eluting peak and (13R)-4-(benzyloxy)-3,5-dioxo-N-(2,4,6-trifluorobenzyl)-3,5,8,13-tetrahydro-7H-6,13-methanobenzo[g]pyrido[1,2-a][1,4]diazonine-2-carboxamide
as the second eluting peak.
[0554] The separated enantiomers were dissolved in 1:1 toluene/TFA (4 mL). The reaction
mixture was allowed to stir at rt for 2 h and concentrated. The residue was dissolved
in MeCN and purified by preparative HPLC (column, Gemini 10µ C18 110A, AXI/; 250 x
21.2 mm) eluting with 5-100% acetonitrile (0.1% TFA) in water (0.1% TFA) over 30 minutes
to afford the title compounds
(63-1 and
63-2).
[0555] 63-1: MS (
m/
z) 470.16 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.39 (t,
J = 5.8 Hz, 1H), 9.01 (s, 1H), 7.37 - 7.12 (m, 6H), 6.02 (s, 1H), 4.60 (d,
J = 5.7 Hz, 2H), 4.45 (dd,
J = 15.0, 2.7 Hz, 1H), 4.28 (td,
J = 12.6, 5.5 Hz, 1H), 4.00 (d,
J = 14.7 Hz, 1H), 3.61 (td,
J = 14.1, 13.2, 7.4 Hz, 1H), 3.42 (dd,
J = 12.6, 7.2 Hz, 1H), 2.83 (dd,
J = 15.3, 5.5 Hz, 1H).
19F NMR (376 MHz, DMSO-d
6) δ -109.25 (tt,
J = 9.4, 6.2 Hz), -112.54 (p,
J = 7.2 Hz).
[0556] 63-2: MS
(m/
z) 470.13 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.39 (t, J = 5.8 Hz, 1H), 9.01 (s, 1H), 7.38 - 7.14 (m, 6H), 6.02 (s, 1H), 4.60
(d,
J= 5.7 Hz, 2H), 4.45 (dd,
J = 15.0, 2.7 Hz, 1H), 4.28 (td,
J= 12.6, 5.5 Hz, 1H), 4.00 (d,
J= 13.9 Hz, 1H), 3.61 (td,
J= 14.0, 13.2, 7.3 Hz, 1H), 3.42 (dd,
J = 12.7, 7.2 Hz, 1H), 2.83 (dd,
J= 15.3, 5.4 Hz, 1H).
19F NMR (376 MHz, DMSO-d
6) δ -109.25 (tt,
J = 9.1, 6.3 Hz), -112.54 (t,
J= 7.4 Hz).
Example 61: Preparation of (13R)-N-(2,4-difluorobenzyl)-4-hydroxy-3,5-dioxo-3,5,8,13-tetrahydro-7H-6,13-methanobenzo[g]pyrido[1,2-a][1,4]diazonine-2-carboxamide and (13S)-N-(2,4-difluorobenzyl)-4-hydroxy-3,5-dioxo-3,5,8,13-tetrahydro-7H-6,13-methanobenzo[g]pyrido[1,2-a][1,4]diazonine-2-carboxamide
(64-1 and 64-2):
[0557]

[0558] The title compounds were prepared in a similar manner to
63-1 and
63-2, using methyl 3-(benzyloxy)-5-((2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate
in place of methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate.
Chiral separation was carried out before deprotection using preparative SFC on an
IA column with 40% MeOH as a co-solvent.
[0559] 64-1: MS
(m/
z) 452.14 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.36 (t, J = 5.9 Hz, 1H), 9.02 (s, 1H), 7.45 (td, J = 8.7, 6.6 Hz, 1H), 7.33
- 7.18 (m, 5H), 7.09 (td, J = 8.4, 2.4 Hz, 1H), 6.05 (s, 1H), 4.67 - 4.51 (m, 2H),
4.47 (dd, J = 15.0, 2.6 Hz, 1H), 4.29 (td, J = 12.7, 5.5 Hz, 1H), 4.01 (d, J = 15.0
Hz, 1H), 3.71 - 3.55 (m, 1H), 3.43 (dd, J = 12.6, 7.2 Hz, 1H), 2.84 (dd, J = 15.3,
5.4 Hz, 1H).
19F NMR (376 MHz, DMSO-d
6) δ -112.30 (p, J = 7.9 Hz), -114.92 (q, J = 8.9 Hz).
[0560] 64-2: MS
(m/
z) 452.17 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.37 (t, J = 5.9 Hz, 1H), 9.03 (s, 1H), 7.46 (td, J = 8.7, 6.6 Hz, 1H), 7.35
- 7.18 (m, 5H), 7.10 (td, J = 8.6, 2.2 Hz, 1H), 6.06 (s, 1H), 4.67 - 4.52 (m, 2H),
4.47 (dd, J = 15.1, 2.7 Hz, 1H), 4.30 (td, J = 12.6, 5.5 Hz, 1H), 4.02 (d, J = 14.5
Hz, 1H), 3.63 (td, J = 14.2, 13.7, 7.5 Hz, 1H), 3.44 (dd, J = 12.6, 7.2 Hz, 1H), 2.85
(dd, J = 15.3, 5.5 Hz, 1H).
19F NMR (376 MHz, DMSO-d
6) δ -112.30 (p, J = 7.9 Hz), -114.92 (q, J = 8.8 Hz).
Example 62: Preparation of (1aR,11aR)-N-(2,4-difluorobenzyl)-7-hydroxy-6,8-dioxo-1a,2,3,4,6,8-hexahydro-1H-5,11a-methanocyclopropa[h]pyrido[1,2-a][1,4]diazonine-9-carboxamide
and (1aS,11aS)-N-(2,4-difluorobenzyl)-7-hydroxy-6,8-dioxo-1a,2,3,4,6,8-hexahydro-1H-5,11a-methanocyclopropa[h]pyrido[1,2-a][1,4]diazonine-9-carboxamide
(65-1 and 65-2):
[0561]

Synthesis of rel-tert-butyl ((1R,2S)-1-(hydroxymethyl)-2-vinylcyclopropyl)carbamate
(65a)
[0562] A solution
rel-(1R,2S)-1-((tert-butoxycarbonyl)amino)-2-vinylcyclopropane-1-carboxylic acid (993.5
mg, 4.37 mmol) in methanol (20 mL) was stirred at 0 °C as 2 M (trimethylsilyl)diazomethane
in diethyl ether (7 mL) was added until yellow color persisted. After 30 min, a solution
of acetic acid in methanol was added dropwise until the yellow color disappeared.
The resulting solution was concentrated and the residue was co-evaporated with toluene.
[0563] The crude residue was dissolved in tetrahydrofuran (15 mL) and stirred at 0 °C, as
1M lithium aluminum hydride (5.8 mL, 5.8 mmol) was added dropwise. After 30 min at
0 °C, the reaction mixture was diluted with ethyl ether (40 mL) and vigorously stirred
at 0 °C, as water (0.22 mL), 15% sodium hydroxide (0.22 mL), and water (0.66 mL) were
sequentially added dropwise. After 30 min stirring at 0 °C, anhydrous sodium sulfate
was added to the mixture and filtered through celite. After the filtrate was concentrated,
the resulting residue was purified by column chromatography on silica gel eluting
with 0-100% ethyl acetate in hexane to obtain the title compound (
65a). MS (
m/
z) 157.76 [M+H-C
4H
8]
+.
Synthesis of rel-tert-butyl allyl(((1R,2R)-1-((tert-butoxycarbonyl)amino)-2-vinylcyclopropyl)methyl)carbamate(65b)
[0564] A solution of rel-tert-butyl ((1R,2S)-1-(hydroxymethyl)-2-vinylcyclopropyl)carbamate
(
65a, 627.6 mg, 2.943 mmol) in dichloromethane (10 mL) and triethylamine (0.62 mL, 4.448
mmol) was stirred at an ice-salt bath, as methanesulfonyl chloride (0.26 mL, 3.359
mmol) was added dropwise. After 30 min in the cold bath, the reaction mixture was
diluted with ice-cold dichloromethane and washed with cold saturated sodium bicarbonate
solution and cold brine. After the aqueous fractions were extracted with dichloromethane,
the combined organic fractions were dried over MgSO
4, and concentrated.
[0565] The crude residue was dissolved in acetonitrile (2 mL), and prop-2-en-1-amine (0.2
mL, 2.666 mmol) was added to the solution at rt, and stirred for 88 h. The reaction
mixture was concentrated to remove most of the acetonitrile and the residue was diluted
with saturated sodium bicarbonate (30 mL), before the product was extracted with ethyl
acetate (30 mL × 2). After the extracts were washed with brine, the organic fractions
were combined, dried over MgSO
4, and concentrated to get the crude product.
[0566] To a solution of the crude amine and triethylamine (1 mL, 7.174 mmol) in tetrahydrofuran
(10 mL) was added di-
tert-butyl dicarbonate (1.6 g, 7.14 mmol) and the resulting solution was stirred at rt
overnight. The reaction mixture was concentrated and the residual oil was dissolved
in ethyl acetate (40 mL), and washed with water. After the aqueous fraction was extracted
with ethyl acetate (40 mL), the organic fractions were combined, dried over MgSO
4, and concentrated. The residue was purified by column chromatography on silica gel
eluting with 0-30% ethyl acetate in hexane to obtain the title compound (
65b). MS (
m/
z) 352.78 [M+H]
+.
Synthesis of rel-tert-butyl (1S,7R)-1-((tert-butoxycarbonyl)amino)-3-azabicyclo[5.1.0]oct-5-ene-3-carboxylate
(65c)
[0567] A solution of
rel-tert-butyl allyl(((R,2R)-1-((tert-butoxycarbonyl)amino)-2-vinylcyclopropyl)methyl)carbamate
(
65b, 837.7 mg, 2.377 mmol) and Grubbs catalyst 2
nd generation (100.89 mg, 118.98 umol) in toluene (800 mL) was purged with Ar gas for
30 min, and stirred at 80 °C for 3 h. The reaction mixture was concentrated, and the
residue purified by column chromatography on silica gel, eluting with 0-30% ethyl
acetate/ hexane to afford the title compound
(65c). MS
(m/
z) 324.75 [M+H]
+.
Synthesis of (1R,7S)-1-(((benzyloxy)carbonyl)amino)-3-azabicyclo[5.1.0]oct-5-ene-3-carboxylate
and (1S,7R)-1-(((benzyloxy)carbonyl)amino)-3-azabicyclo[5.1.0]oct-5-ene-3-carboxylate
(65d-1 and 65d-2)
[0568] A solution of
rel-tert-butyl allyl(((1R,2R)-1-((tert-butoxycarbonyl)amino)-2-vinylcyclopropyl)methyl)carbamate
(
65c, 677.9 mg, 2.090 mmol) in dichloromethane (5.5 mL) was stirred at 0 °C, as 4 M HCl
in dioxane (5.3 mL, 21.20 mmol) was added. After addition, the mixture was stirred
at rt for 1 h, additional 4 N HCl in dioxane (5.3 mL) was added, and the mixture was
stirred for 2 h, and concentrated to dryness. A suspension of the residue and sodium
carbonate (1.3 g, 12.56 mmol) in dioxane (8 mL) and water (8 mL) was stirred at 0
°C, as benzyl chloroformate (0.75 mL, 5.04 mmol) was added. After stirring for 3 h
at rt, the reaction mixture was diluted with ethyl acetate (40 mL) and washed with
water (x 2). The aqueous fractions were extracted with ethyl acetate (∼30 mL), and
the organic fractions were combined, dried over MgSO
4, and concentrated. The residue was purified by column chromatography on silica gel
eluting with 0-80% ethyl acetate in hexane to afford
rel-benzyl (1
R, 7
S)-1-(((benzyloxy)carbonyl)amino)-3-azabicyclo[5.1.0]oct-5-ene-3-carboxylate. MS (m/z)
392.99 [M+H]
+.
[0569] Benzyl
rel-(
1R,7S)-1-(((benzyloxy)carbonyl)amino)-3-azabicyclo[5.1.0]oct-5-ene-3-carboxylate was separated
into its individual enantiomers by preparative SFC chromatography on an Cell 2 column
using 15% IPA-NH
3 co-solvent to provide the title compounds (
65d-1 and
65d-2).
Synthesis of (1aR,11aR)- and (1aS,11aS)-N-(2,4-difluorobenzyl)-7-hydroxy-6,8-dioxo-1a,2,3,4,6,8-hexahydro-1H-5,11a-methanocyclopropa[h]pyrido[1,2-a][1,4]diazonine-9-carboxamide
(65-1 and 65-2)
[0570] A mixture of benzyl (
1R,
7S)-1-(((benzyloxy)carbonyl)amino)-3-azabicyclo[5.1.0]oct-5-ene-3-carboxylate or (
1S,
7R)-1-(((benzyloxy)carbonyl)amino)-3-azabicyclo[5.1.0]oct-5-ene-3-carboxylate (
65d-1 or
65d-2, 96.4 mg, 0.246 mmol) and 20% palladium hydroxide on carbon (9.9 mg) in ethanol (2
mL) and ethyl acetate (4 mL) was stirred under H
2 atmosphere for 3 h. The reaction mixture was filtered through celite, washed with
ethanol, and the filtrate was concentrated to dryness to get the crude hydrogenated
product.
[0571] Methyl 3-(benzyloxy)-5-((2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate
(52.9 mg, 0.123 mmol) and sodium bicarbonate (273 mg, 0.325 mmol) were added to the
crude product, followed by water (0.5 mL) and methanol (2.5 mL), before stirring at
50 °C for 17 h. The reaction mixture was concentrated to remove most of solvent and
the residue was dissolved in ethyl acetate (15 mL) and brine (15 mL), and the fractions
were separated. The aqueous fraction was extracted with ethyl acetate (15 mL), and
the two organic fractions were washed with brine, combined, dried over MgSO
4, and concentrated. The residue was dissolved in methanol (2 mL) and 1 N lithium hydroxide
(1 mL), and stirred vigorously at 50 °C for 30 min. The resulting reaction mixture
was neutralized with 1 N HCl and diluted with ethyl acetate (15 mL) before washing
with water (15 mL × 2). After the aqueous fractions were extracted with ethyl acetate
(15 mL), the combined organic fractions were dried over MgSO
4 and concentrated. MS
(m/
z) 506.16 [M+H]
+.
[0572] The above residue was dissolved in toluene (0.2 mL) and trifluoroacetic acid (1 mL)
before stirring at rt. After 2 h, the reaction mixture was concentrated and the residue
was purified by preparative HPLC (column, Gemini 10u C18 110A, AXI/; 250 × 21.2 mm)
eluting with 10-70% acetonitrile in water (0.1% TFA) to get the title compounds (
65-1 or
65-2).
[0573] 65-1: MS
(m/
z) 416.21 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) δ 10.28 (s, 1H), 8.20 (s, 1H), 7.39 (td, J = 8.7, 6.4 Hz, 1H), 7.04 - 6.81 (m, 2H),
4.56 (d, J = 5.8 Hz, 2H), 4.43 (dd, J = 13.7, 4.6 Hz, 1H), 4.05 (dt, J = 14.9, 1.0
Hz, 1H), 3.29 (d, J = 14.9 Hz, 1H), 3.00 (ddd, J = 13.7, 12.3, 3.4 Hz, 1H), 2.34 (dd,
J = 15.0, 5.6 Hz, 1H), 2.28 (dd, J = 9.5, 7.9 Hz, 1H), 1.86 - 1.73 (m, 1H), 1.73 -
1.62 (m, 1H), 1.41 (dd, J = 7.8, 6.5 Hz, 1H), 1.39 - 1.31 (m, 1H), 1.25 (tt, J = 10.3,
5.8 Hz, 1H).
19F NMR (376 MHz, Acetonitrile-d
3) δ -77.35, -114.10 (p, J = 7.6 Hz), -116.63 (q, J = 8.8, 8.3 Hz).
[0574] 65-2: MS
(m/
z) 416.21 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) δ 10.30 (s, 1H), 8.23 (s, 1H), 7.42 (td, J = 8.8, 6.6 Hz, 1H), 7.06 - 6.87 (m, 2H),
4.59 (d, J = 5.8 Hz, 2H), 4.46 (dt, J = 13.8, 3.2 Hz, 1H), 4.15 - 3.98 (m, 1H), 3.32
(d, J = 14.9 Hz, 1H), 3.03 (ddd, J = 13.7, 12.3, 3.4 Hz, 1H), 2.42 - 2.33 (m, 1H),
2.31 (dd, J = 9.5, 7.8 Hz, 1H), 1.82 (dtdd, J = 14.4, 12.4, 4.7, 2.0 Hz, 1H), 1.72
(dddd, J = 12.5, 5.4, 3.4, 1.7 Hz, 1H), 1.45 (dd, J = 7.9, 6.4 Hz, 1H), 1.42 - 1.33
(m, 1H), 1.34 - 1.23 (m, 1H).
19F NMR (376 MHz, Acetonitrile-d
3) δ -77.35, - 114.04 (ddd, J = 15.6, 8.8, 6.8 Hz), -116.45, -116.76 (m).
Example 63: Preparation of (1aR,11aR)-N-(2,4,6-trifluorobenzyl)-7-hydroxy-6,8-dioxo-1a,2,3,4,6,8-hexahydro-1H-5,11a-methanocyclopropa[h]pyrido[1,2-a][1,4]diazonine-9-carboxamide
and (1as,11as)-N-(2,4,6-trifluorobenzyl)-7-hydroxy-6,8-dioxo-1a,2,3,4,6,8-hexahydro-1H-5,11a-methanocyclopropa[h]pyrido[1,2-a][1,4]diazonine-9-carboxamide
(66-1 and 66-2):
[0575]

[0576] The title compounds were synthesized analogously to
65-1 and
65-2 using methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate
in place of methyl 3-(benzyloxy)-5-((2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate.
[0577] 66-1: MS
(m/
z) 434.19 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) δ 10.28 (s, 1H), 8.18 (s, 1H), 6.94 - 6.72 (m, 2H), 4.68 - 4.49 (m, 2H), 4.42 (dd,
J = 13.7, 4.5 Hz, 1H), 4.03 (dd, J = 14.6, 1.4 Hz, 1H), 3.28 (d, J = 14.8 Hz, 1H),
2.99 (ddd, J = 13.8, 12.3, 3.4 Hz, 1H), 2.32 (d, J = 9.2 Hz, 1H), 2.28 (dd, J = 9.6,
7.8 Hz, 1H), 1.86 - 1.72 (m, 1H), 1.72 - 1.62 (m, 1H), 1.40 (dd, J = 7.9, 6.5 Hz,
1H), 1.38 - 1.29 (m, 1H), 1.24 (tt, J = 10.6, 5.7 Hz, 1H).
19F NMR (376 MHz, Acetonitrile-d
3) δ -77.32, -111.22 (tt, J = 9.4, 6.2 Hz), -113.94 (t, J = 7.3 Hz).
[0578] 66-2: MS
(m/
z) 434.22 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) δ 10.28 (s, 1H), 8.18 (s, 1H), 6.92 - 6.74 (m, 2H), 4.67 - 4.49 (m, 2H), 4.42 (dd,
J = 13.6, 4.5 Hz, 1H), 4.10 - 3.97 (m, 1H), 3.28 (d, J = 14.9 Hz, 1H), 2.99 (ddd,
J = 13.8, 12.3, 3.4 Hz, 1H), 2.38 - 2.21 (m, 1H), 2.31 - 2.21 (m, 1H), 1.86 - 1.72
(m, 1H), 1.72 - 1.61 (m, 1H), 1.40 (dd, J = 7.9, 6.4 Hz, 1H), 1.38 - 1.29 (m, 1H),
1.24 (tt, J = 10.6, 5.7 Hz, 1H).
19F NMR (376 MHz, Acetonitrile-d
3) δ -77.37, -111.21 (tt, J = 9.0, 6.0 Hz), -113.95 (q, J = 5.8, 4.4 Hz).
Example 64: Preparation of N-(3-chloro-2,4-difluorobenzyl)-4-fluoro-7-hydroxy-6,8-dioxo-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]pyrido[1,2-a][1,4]diazonine-9-carboxamide
(67):
[0579]

[0580] The title compound was prepared similarly to 50-2 using 9-fluoro-1,3,4,5-tetrahydro-2H-benzo[b]azepin-2-one
in place of 7,8-difluoro-1,3,4,5-tetrahydro-2H-benzo[b]azepin-2-one
(50a), and methyl 3-(benzyloxy)-5-((3-chloro-2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate
in place of methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate.
MS
(m/
z) 504.1 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.36 (t, J = 6.0 Hz, 1H), 8.59 (s, 1H), 7.43 - 7.35 (m, 1H), 7.35 - 7.24 (m,
2H), 7.19 (dd, J = 23.5, 8.2 Hz, 2H), 4.92 (s, 1H), 4.60 (d, J = 6.0 Hz, 2H), 4.27
- 4.15 (m, 1H), 3.78 (dd, J = 14.8, 2.0 Hz, 1H), 2.85 (d, J = 8.2 Hz, 1H), 2.77 (d,
J = 10.6 Hz, 1H), 2.29 (d, J = 16.2 Hz, 1H), 2.15 - 2.00 (m, 1H).
Example 65: Preparation of N-(3-chloro-2,4-difluorobenzyl)-2-fluoro-7-hydroxy-6,8-dioxo-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]pyrido[1,2-a][1,4]diazonine-9-carboxamide
(68):
[0581]

[0582] The title compound was prepared similarly to
50-2 using 7-fluoro-1,3,4,5-tetrahydro-2H-benzo[b]azepin-2-one in place of 7,8-difluoro-1,3,4,5-tetrahydro-2H-benzo[b]azepin-2-one
(50a), and methyl 3-(benzyloxy)-5-((3-chloro-2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate
in place of methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate.
MS (
m/
z) 504.1 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.37 (t, J = 6.0 Hz, 1H), 8.58 (s, 1H), 7.48 - 7.30 (m, 3H), 7.30 - 7.18 (m,
2H), 7.18 - 7.00 (m, 1H), 4.90 - 4.85 (m, 1H), 4.60 (d, J = 6.0 Hz, 2H), 4.14 (d,
J = 14.4 Hz, 1H), 3.72 (dd, J = 14.7, 2.0 Hz, 1H), 2.80 (dt, J = 8.4, 4.1 Hz, 1H),
2.74 - 2.69 (m, 1H), 2.22 (d, J = 4.8 Hz, 1H), 2.08 (dd, J = 11.9, 5.3 Hz, 1H).
Example 66: Preparation of N-(3-chloro-2,4-difluorobenzyl)-2,3-difluoro-7-hydroxy-6,8-dioxo-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]pyrido[1,2-a][1,4]diazonine-9-carboxamide
(69):
[0583]

[0584] The title compound was prepared similarly to
50-2 using methyl 3-(benzyloxy)-5-((3-chloro-2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate
in place of methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate.
MS (
m/
z) 522 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.35 (t, J = 6.0 Hz, 1H), 8.57 (s, 1H), 7.48 (dt, J = 11.5, 8.7 Hz, 2H), 7.44
- 7.35 (m, 1H), 7.28 (td, J = 8.8, 1.7 Hz, 1H), 4.89 (t, J = 2.5 Hz, 1H), 4.60 (d,
J = 5.9 Hz, 2H), 4.13 (d, J = 14.9 Hz, 1H), 3.78 (dd, J = 14.8, 2.0 Hz, 1H), 2.85
- 2.73 (m, 1H), 2.73 - 2.64 (m, 1H), 2.24 (s, 1H), 2.12 - 2.03 (m, 1H).
Example 67: Preparation of (6S)-1-hydroxy-2,14-dioxo-N-(2,4,6-trifluorobenzyl)-2,7,12,14-tetrahydro-6H-6,13-methanobenzo[f]pyrido[1,2-a][1,4]diazonine-3-carboxamide
(70):
[0585]

Synthesis of (S)-3-(2-(aminomethyl)phenyl)-2-((tert-butoxycarbonyl)amino)propanoic
acid (70a):
[0586] A solution of (S)-2-((tert-butoxycarbonyl)amino)-3-(2-cyanophenyl)propanoic acid
(1.00 g, 3.44 mmol) in EtOH (34 mL) was added to a Parr shaker pressure vessel. Raney
nickel (0.142 g, 2.42 mmol) was added, and the reaction mixture was hydrogenated at
55 psi for 24 h. The reaction mixture was filtered through Celite, rinsing with EtOH
then CH
2Cl
2. The filtrate was concentrated to afford the title compound
(70a), which was used in the next step without further purification. MS (m/z) 294.93 [M+H]
+.
Synthesis of tert-butyl (S)-(3-oxo-2,3,4,5-tetrahydro-1H-benzo[c]azepin-4-yl)carbamate
(70b):
[0587] To a suspension of crude (S)-3-(2-(aminomethyl)phenyl)-2-((tert-butoxycarbonyl)amino)
propanoic acid (
70a, 1.20 g, 4.08 mmol) in CH
2Cl
2 (17 mL) and DMF (3.4 mL) was added HOAt (0.703 g, 5.17 mmol) and EDC (0.660 g, 3.44
mmol). The reaction mixture was stirred at rt for 1 h and concentrated. EtOAc was
added, and the organic phase was washed with 1 M HCl, 1 M NaOH, water, and brine.
The organic phase was dried over Na
2SO
4, filtered, concentrated, and purified by column chromatography (25-100% EtOAc/heptane)
to afford the title compound (
70b). MS (m/z) 299.03 [M+Na]
+.
Synthesis of tert-butyl (S)-(2,3,4,5-tetrahydro-1H-benzo[c]azepin-4-yl)carbamate (70c):
[0588] To a solution of tert-butyl (S)-(3-oxo-2,3,4,5-tetrahydro-1H-benzo[c]azepin-4-yl)carbamate
(
70b, 0.42 g, 1.52 mmol) in THF (5 mL) at 0 °C, was added a 1 M borane-THF solution (6.1
mL, 6.1 mmol). The reaction mixture was allowed to warm to rt and stir for 2 h. The
reaction mixture was cooled to 0 °C, and quenched with MeOH (3 mL). After stirring
for 5 min, the mixture was concentrated, diluted with EtOAc, and washed with saturated
aqueous NaHCO
3 and water. The combined aqueous phase was extracted with EtOAc. The combined organic
phase was dried over Na
2SO
4, and concentrated to afford the title compound (
70c), which was used in the next step without further purification. MS (m/z) 262.99 [M+H]
+.
Synthesis of (6S)-1-hydroxy-2,14-dioxo-N-(2,4,6-trifluorobenzyl)-2,7,12,14-tetrahydro-6H-6,13-methanobenzo[f]pyrido[1,2-a][1,4]diazonine-3-carboxamide
(70):
[0589] The title compound was synthesized in the same manner as compound
27, using tert-butyl (S)-(2,3,4,5-tetrahydro-1H-benzo[c]azepin-4-yl)carbamate
(70c) in place of tert-butyl (2-oxo-2,3,4,5-tetrahydro-1H-benzo[b]azepin-3-yl)carbamate
and methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate
in place of methyl 3-(benzyloxy)-5-((2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate.
MS (
m/
z) 470.19 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.37 (t, J = 5.8 Hz, 1H), 8.54 (s, 1H), 7.34 - 7.26 (m, 2H), 7.25 - 7.18 (m,
3H), 7.17 (d, J = 7.4 Hz, 1H), 5.53 (d, J = 16.4 Hz, 1H), 4.99 (dt, J = 8.4, 4.2 Hz,
1H), 4.58 (d, J = 5.7 Hz, 2H), 4.45 (d, J = 16.6 Hz, 1H), 3.77 (d, J = 14.5 Hz, 1H),
3.55 (dd, J = 14.7, 2.8 Hz, 1H), 3.36 (dd, J = 15.0, 7.5 Hz, 1H), 2.87 (dd, J = 14.9,
7.7 Hz, 1H).
19F NMR (376 MHz, DMSO-d
6) δ -109.27 (tt, J = 9.2, 6.3 Hz), -112.59 (t, J = 7.3 Hz).
Example 68: Preparation of (6S)-N-(2,4-difluorobenzyl)-1-hydroxy-2,14-dioxo-2,7,12,14-tetrahydro-6H-6,13-methanobenzo[f]pyrido[1,2-a][1,4]diazonine-3-carboxamide
(71):
[0590]

[0591] The title compound was prepared in a similar manner to compound
70 using methyl 3-(benzyloxy)-5-((2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate
instead of methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate.
MS (
m/
z) 452.14 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.34 (t, J = 5.9 Hz, 1H), 8.56 (s, 1H), 7.41 (td, J = 8.7, 6.5 Hz, 1H), 7.32
- 7.20 (m, 4H), 7.17 (d, J = 7.4 Hz, 1H), 7.11 - 7.02 (m, 1H), 5.54 (d, J = 16.5 Hz,
1H), 5.07 - 4.92 (m, 1H), 4.56 (d, J = 6.0 Hz, 2H), 4.46 (d, J = 16.6 Hz, 1H), 3.78
(d, J = 14.5 Hz, 1H), 3.56 (dd, J = 14.7, 2.8 Hz, 1H), 3.40 - 3.39 (m, 1H), 2.89 (dd,
J = 14.9, 7.7 Hz, 1H).
19F NMR (376 MHz, DMSO-d
6) δ -112.36 (p, J = 7.7 Hz), -114.98 (q, J = 8.8 Hz).
Example 69: Preparation of (6S, 7R)-6-chloro-12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
and (6R, 7R)-6-chloro-12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(72-1 and 72-2:
[0592]

Synthesis of (6S,7R)-12-(benzyloxy)-6-chloro-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide and (6R, 7R)-12-(benzyloxy)-6-chloro-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(72a-1 and 72a-2):
[0593] (7R)-12-(benzyloxy)-6-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(
15b-1, 150 mg, 0.284 mmol) and Ph
3P (186 mg, 0.711 mmol) were mixed with CCl
4 (3 mL) and DCM (3 mL) at room temperature. Reaction mixture was then heated in a
seal tube at 37 °C for 17 hr. The reaction mixture was purified on silica gel column
with 0-100% EtOAc /hexane to afford product as a mixture of two diastereomers. Subsequent
chiral separation with SFC-IA 45 with MeOH as co-solvent afforded the title compounds
(
72a-1 and
72a-2), stereochemistry assigned speculatively. MS (
m/
z) 546.10 [M+H]
+.
Synthesis of (6S, 7R)-6-chloro-12-hydroxy-1,11-dioxo-N-(2,4,6-tiifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
and (6R, 7R)-6-chloro-12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2.7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(72-1 and 72-2):
[0594] (
6S, 7R)-12-(benzyloxy)-6-chloro-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
or (
6R, 7R)-12-(benzyloxy)-6-chloro-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(
72a-1 or
72a-2, 31 mg, 0.0568 mmol) was mixed with toluene (4 mL) at rt. and TFA (4 mL) was added.
Reaction was stirred at room temperature for 17 hours, and was concentrated to dryness.
The residue was put under high vacuum for 10 hours. The residue was taken up in MeOH.
After filtering the solution, the filtrate was purified by preparative HPLC (column,
Gemini 10µ C18 110A, AXI/; 250 × 21.2 mm) eluting with 5-100% acetonitrile in water
(0.1% TFA) over 20 minutes. Combined fractions were freeze-dried to afford the title
compound (
72-1 or
72-2).
[0595] 72-1: MS (
m/
z) 456.20 [M+]
+.
1H NMR (400 MHz, DMSO-d
6)
δ 10.62 (s, 1H), 10.31 (t, J = 5.8 Hz, 1H), 8.49 (s, 1H), 7.18 (dd, J = 9.2, 8.1 Hz,
2H), 6.49 (s, 1H), 4.91 (d, J = 2.6 Hz, 1H), 4.71 (td, J = 3.6, 1.7 Hz, 1H), 4.65
- 4.46 (m, 2H), 4.19 - 4.03 (m, 1H), 3.95 - 3.69 (m, 2H), 3.11 (ddd, J = 13.2, 7.5,
2.8 Hz, 1H), 2.13 (dt, J = 15.0, 5.5 Hz, 1H), 2.06 - 1.91 (m, 1H), 1.88 - 1.72 (m,
1H), 1.55 (dd, J = 16.0, 10.9 Hz, 1H).
[0596] 72-2: MS (
m/
z) 456.20 [M+]
+.
1H NMR (400 MHz, DMSO-d
6)
δ 10.62 (s, 1H), 10.31 (t, J = 5.8 Hz, 1H), 8.49 (s, 1H), 7.18 (t, J = 8.6 Hz, 2H),
6.50 (s, 1H), 4.91 (s, 1H), 4.71 (d, J = 5.5 Hz, 1H), 4.64 - 4.45 (m, 2H), 4.11 (dt,
J = 13.1, 8.0 Hz, 1H), 3.97 - 3.69 (m, 2H), 3.11 (ddd, J = 13.2, 7.5, 2.7 Hz, 1H).
Example 70: (5R,7S)-5-fluoro-12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
and (5R, 7R)-5-fluoro-12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(73-1 and 73-2):
[0597]

[0598] The title compounds were prepared analogously to
56-1 and
56-2, using methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate
in place of methyl 3-(benzyloxy)-5-((2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate.
[0599] 73-1: MS
(m/
z) 440.1 [M+H]
+.
1H NMR (400 MHz, Chloroform-
d) δ 10.45 (s, 1H), 8.47 (s, 1H), 6.75 - 6.58 (m, 2H), 5.24 - 5.01 (m, 1H), 4.83 -
4.63 (m, 2H), 4.60 - 4.42 (m, 2H), 4.12 - 3.94 (m, 1H), 3.56 (dd, 1H), 3.30 - 3.16
(m, 1H), 2.50 (s, 2H), 2.36 - 2.05 (m, 1H), 1.27 (s, 1H).
[0600] 73-2: MS (
m/
z) 440.1 [M+H]
+.
1H NMR (400 MHz, Chloroform-
d) δ 10.45 (s, 1H), 8.58 (s, 1H), 6.77 - 6.61 (m, 2H), 4.97 (dt, 1H), 4.79 - 4.61 (m,
2H), 4.61 - 4.50 (m, 2H), 3.99 (d, 1H), 3.83 (dd, 1H), 3.20 (dt, 1H), 2.90 - 2.66
(m, 1H), 2.38 - 2.21 (m, 1H), 2.21 - 2.11 (m, 1H), 2.11 - 1.94 (m, 1H).
Example 71: (7S)-N-(3-chloro-2,4,6-trifluorobenzyl)-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide (74):
[0601]

[0602] The title compound was prepared analogously to 62, using 3-chloro-2,4,6-trifluorobenzaldehyde
in place of 2,3-dichloro-4-fluorobenzaldehyde. MS (
m/
z) 456.3 [M+H]
+.
1H NMR (400 MHz, Chloroform-
d) δ 10.45 (s, 1H), 8.39 (s, 1H), 6.81 (td, 1H), 4.71 (qd, 2H), 4.49 - 4.33 (m, 2H),
3.97 (d, 1H), 3.53 (dd, 1H), 3.16 (ddd, 1H), 2.22 - 1.98 (m, 3H), 1.94 - 1.74 (m,
1H), 1.45 - 1.29 (m, 2H).
Example 72: Preparation of (7S)-6-fluoro-12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
and (7R)-6-fluoro-12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(75-1 and 75-2):
[0603]

Synthesis of (7S)-12-(benzyloxy)-6-fluoro-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,2]diazonine-10-carboxamide
and (7R)-12-(benzyloxy)-6-fluoro-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(75a-1 and 75a-2)
[0604] Neat DeoxoFluor (3.7 mL, 20.2 mmol) was added dropwise to a solution of 12-(benzyloxy)-1,6,11-trioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(
10b, 1.06 g, 2.02 mmol) in DCM (9 mL) at 0 °C. Reaction was stirred without recharging
cold bath for 17 hours. Then a second portion of DeoxoFluor (3.7 mL, 20.2 mmol) was
added at room temperature. Reaction mixture was stirred at room temperature for 17
hours. The reaction mixture was added to a well stirred saturated NaHCO
3/water slurry. It was stirred at room temperature for 20-30 min, and EtOAc (200 mL)
was added. The mixture was filtered through celite plug. The organic phase was concentrated,
and the residue was purified on silica gel column with 0-100% EtOAc / Hex to afford
racemic fluoro-olefin product. The two enantiomers were separated with SFC separation
using IG 35 Isopropanol-NH
3 to afford of the title products, stereochemistry assigned arbitrarily.
75a-1: MS(
m/
z) 528.06 [M+H]
+;
75a-2: MS(m/z) 528.03 [M+H]
+.
Synthesis of (7S)- and (7R)-6-fluoro-12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(75-1 and 75-2):
[0605] TFA(2 mL) was added to a solution of (7S)- or (7R)-12-(benzyloxy)-6-fluoro-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(
75a-1 or
75a-2, 65 mg, 0.123 mmol) in toluene (2 mL) at rt. Reaction was stirred at room temperature
for 17 hours and was concentrated to dryness. The residue was taken up in MeOH, filtered,
and the filtrate was purified by preparative HPLC (column, Gemini 10µ C18 110A, AXI/;
250 × 21.2 mm) eluting with 5-100% acetonitrile in water (0.1% TFA) over 20 minutes,
to afford the title compounds.
[0606] 75-1: MS (
m/
z) 438.20 [M+H]
+;
1H NMR (400 MHz, DMSO-d
6)
δ 10.27 (t, J = 5.8 Hz, 1H), 8.47 (s, 1H), 7.18 (dd, J = 9.2, 8.1 Hz, 2H), 5.77 - 5.47
(m, 2H), 4.55 (d, J = 5.8 Hz, 2H), 4.19 (ddd, J = 12.9, 11.5, 6.7 Hz, 1H), 4.07 (dt,
J = 15.1, 1.9 Hz, 1H), 3.89 (ddd, J = 15.4, 8.5, 1.8 Hz, 1H), 3.29 (dd, J = 13.0,
8.2 Hz, 1H), 2.80 (tq, J = 10.4, 6.6, 6.0 Hz, 1H), 2.20 (ddd, J = 16.2, 10.0, 6.6
Hz, 1H).
[0607] 75-2: MS (
m/
z): 438.20 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6)
δ 10.27 (t, J = 5.8 Hz, 1H), 8.47 (s, 1H), 7.19 (t, J = 8.6 Hz, 2H), 5.82 - 5.42 (m,
2H), 4.55 (d, J = 5.8 Hz, 2H), 4.25 - 4.13 (m, 1H), 4.07 (dt, J = 15.2, 1.9 Hz, 1H),
3.89 (ddd, J = 15.3, 8.4, 1.7 Hz, 1H), 3.29 (dd, J = 13.0, 8.2 Hz, 1H), 2.98 - 2.67
(m, 1H), 2.20 (ddd, J = 16.3, 9.9, 6.6 Hz, 1H).
Example 73: Preparation of (7R)-N-(2,4-difluorobenzyl)-6-(difluoromethyl)-6,12-dihydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(76):
[0608]

Synthesis of benzyl (3R)-3-(((benzyloxy)carbonyl)amino)-4-(difluoromethyl)-4-hydroxyazepane-1-carboxylate
(76a):
[0609] Under argon atmosphere, CsF (29 mg, 0.19 mmol) and 18-crown-6 (50 mg, 0.19 mmol)
were added to a solution of benzyl (R)-3-(((benzyloxy)carbonyl)amino)-4-oxoazepane-1-carboxylate
(
14c-1, 250 mg, 0.63 mmol) in 1,2-dimethoxyethane (3 mL). Me
3SiCF
2H (235 mg, 1.89 mmol) was added, and the mixture was stirred at room temperature overnight.
HCl aq. (1 M, 1.0 mL) was added and the mixture was extracted with ethyl acetate (20
mL × 3). The organic phase was washed with brine and then dried over Na
2SO
4. After filtration, and evaporation under vacuum, the residue was subjected to silica
gel column chromatography using hexane/ethyl acetate to give the title compound (
76a). MS
(m/
z) 449.17 [M+H]
+.
Synthesis of (7R)-N-(2,4-difluorobenzyl)-6-(difluoromethyl)-6,12-dihydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyridor[1,2-a][1,4]diazonine-10-carboxamide
(76):
[0610] The title compound was prepared in a manner similar to
60-1, using benzyl (3R)-3-(((benzyloxy)carbonyl)amino)-4-(difluoromethyl)-4-hydroxyazepane-1-carboxylate
(76a) in place of benzyl (3R,4S)-3-(((benzyloxy)carbonyl)amino)-4-fluoro-4-methylazepane-1-carboxylate
(60b-2). MS
(m/
z) 470.18 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.48 - 10.37 (m, 2H), 8.29 (s, 1H), 7.41 (td, J = 8.7, 6.6 Hz, 1H), 7.26 (ddd,
J = 10.6, 9.3, 2.6 Hz, 1H), 7.08 (dt, J = 9.4, 4.6 Hz, 1H), 6.55 (s, 2H), 6.01 (t,
J = 55.3 Hz, 1H), 5.85 (s, 1H), 4.84 (s, 1H), 4.55 (d, J = 5.8 Hz, 2H), 4.15 (d, J
= 12.7 Hz, 1H), 3.88 (s, 2H), 2.93-3.05 (m, 1H), 2.13 - 1.99 (m, 2H), 1.74 - 1.59
(m, 2H).
Example 74: Preparation of (6S,7R)-N-(2,4-difluorobenzyl)-6-ethyl-6,12-dihydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(77):
[0611]

Synthesis of (3R,4S)-3-amino-4-ethylazepan-4-ol (77a):
[0612] The title compound was prepared in a manner similar to
14d-1 using ethyl Grignard in place of methyl Grignard.
Preparation of (6S,7R)-N-(2,4-difluorobenzyl)-6-ethyl-6,12-dihydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(77)
[0613] The title compound was prepared in a manner similar to compound
28 using (3R,4S)-3-amino-4-ethylazepan-4-ol
(77a) instead of 1,4-oxazepan-6-amine. MS (
m/
z) 448.22 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.79 (s, 1H), 10.46 (t, J = 6.0 Hz, 1H), 8.27 (s, 1H), 7.46 - 7.35 (m, 1H), 7.30
- 7.20 (m, 1H), 7.12 - 7.03 (m, 1H), 4.79 (s, 1H), 4.55 (d, J = 6.1 Hz, 2H), 4.24
(s, 1H), 4.19 - 4.06 (m, 1H), 3.84 (dd, J = 15.3, 2.9 Hz, 1H), 3.70 (d, J = 15.0 Hz,
1H), 1.77 (dt, J = 16.7, 8.2 Hz, 3H), 1.56 (dt, J = 14.5, 7.1 Hz, 2H), 1.17 - 1.05
(m, 1H), 0.89 (t, J = 7.3 Hz, 3H).
Example 75: Preparation of (7S)-12-hydroxy-1,4,11-trioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(78):
[0614]

[0615] The title compound was synthesized in a manner similar to compound
60-1, using benzyl (S)-3-(((benzyloxy)carbonyl)amino)-6-oxoazepane-1-carboxylate in place
of benzyl (3R,4S)-3-(((benzyloxy)carbonyl)amino)-4-fluoro-4-methylazepane-1-carboxylate
(60b-2). MS
(m/
z) 436.23 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) δ 10.31 (s, 1H), 8.47 (s, 1H), 7.03 - 6.80 (m, 2H), 4.86 (d, J = 17.4 Hz, 1H), 4.65
(dd, J = 21.0, 4.9 Hz, 3H), 4.10 (d, J = 14.9 Hz, 1H), 3.63 (d, J = 17.4 Hz, 1H),
3.48 (dd, J = 15.0, 1.7 Hz, 1H), 2.68 - 2.56 (m, 1H), 2.34 - 2.11 (m, 3H).
Example 76: Preparation of (4S,7S)-4,12-dihydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
and (4R,7S)-4,12-dihydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide (79-1 and 79-2):
[0616]

Synthesis of (7S)-12-(benzyloxy)-1,4,11-trioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide (79a):
[0617] The title compound was prepared in a manner similar to compound
78, and isolated as the benzyl-protected alcohol, before TFA deprotection.
Synthesis of (4S,7S)-12-(benzyloxy)-4-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
and (4R,7S)-12-(benzyloxy)-4-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(79b-1 and 79b-2):
[0618] NaBH
4 (4 mg) was added to a solution of (7S)-12-(benzyloxy)-1,4,11-trioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(
79a, 27 mg, 0.051 mmol) in methanol (2 mL), at rt. It was stirred for 20 min, and purified
via preparative HPLC, eluting with10-60% acetonitrile (0.1% TFA) in water (0.1% TFA)
to give the titled compounds (
79b-1 and
79b-2) as separated diastereomers, stereochemistry tentatively assigned. MS
(m/
z) 528.18 [M+H]
+.
Synthesis of (4S,7S)-4,12-dihydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
and (4R,7S)-4,12-dihydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(79-1 and 79-2)
[0619] The titled compounds were synthesized in a manner similar to compound
28, using (4S,7S)-12-(benzyloxy)-4-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
or (4R,7S)-12-(benzyloxy)-4-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(
79b-1 or
79b-2) in place of (7S)-12-(benzyloxy)-N-(2,4-difluorobenzyl)-1,11-dioxo-1,3,4,6,7,11-hexahydro-2,7-methanopyrido[1,2-d][1,4,7]oxadiazonine-10-carboxamide
(28a), and methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate
in place of methyl 3-(benzyloxy)-5-((2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate.
[0620] 79-1: MS (
m/
z) 438.22 [M+H]
+.
1H NMR (400 MHz, Methanol-d
4) δ 8.49 (d, J = 12.7 Hz, 1H), 7.01 - 6.82 (m, 2H), 6.74 (t, J = 8.3 Hz, 1H), 4.68
(s, 3H), 4.35 - 4.11 (m, 2H), 3.94 (d, J = 14.5 Hz, 1H), 3.69 (d, J = 14.7 Hz, 1H),
3.44 (dd, J = 12.7, 4.5 Hz, 1H), 2.24 (s, 2H), 2.09 (t, J = 11.6 Hz, 1H), 1.90- 1.58
(m, 3H).
[0621] 79-2: MS (
m/
z) 438.22 [M+H]
+.
1H NMR (400 MHz, Methanol-d
4) δ 8.49 (s, 1H), 6.92 (t, J = 8.4 Hz, 2H), 4.68 (s, 2H), 4.56 (dd, J = 13.9, 6.1
Hz, 1H), 4.20 (s, 1H), 3.95 (s, 2H), 3.10 (dd, J = 13.9, 3.5 Hz, 1H), 2.59 (d, J =
14.4 Hz, 1H), 1.95 (d, J = 5.1 Hz, 1H), 1.89 - 1.70 (m, 1H), 1.57 (t, J = 13.3 Hz,
1H).
Example 77a: Preparation of (6S)-1-hydroxy-2,15-dioxo-N-(2,4,6-trifluorobenzyl)-2,6,7,8,9,15-hexahydro-6,14-methanobenzo[e]pyrido[1,2-a][1,4]diazecine-3-carboxamide
(80-1):
[0622]

Synthesis of tert-butyl (2-oxo-1,2,3,4,5,6-hexahydrobenzo[b]azocin-3-yl)carbamate
(80a):
[0623] To a solution of 2-(2-oxo-3,4,5,6-tetrahydro-1H-1-benzazocin-3-yl)isoindoline-1,3-dione,
(prepared according to
US 4537885, 1.5 grams, 4.68 mmol) in ethanol (30 mL) was added hydrazine (0.22 mL, 7.0 mmol).
After 3 hours, the reaction mixture was filtered, and the filtrate was concentrated,
and purified by CombiFlash (24 g, 0-20% MeOH/CH
2Cl
2) to give 3-amino-3,4,5,6-tetrahydro-1H-1-benzazocin-2-one that was used in next step
without further purification.
[0624] A mixture of 3-amino-3,4,5,6-tetrahydro-1H-1-benzazocin-2-one from above and di-tert-butyl
dicarbonate (1.53 g, 7.0 mmol) in saturated sodium bicarbonate (10 mL) and THF (20
mL) was stirred overnight at room temperature. Reaction mixture was diluted with ethyl
acetate and washed with brine. Aqueous layer was back-extracted with ethyl acetate.
The combined organic layer was dried over MgSO
4, filtered, concentrated, and crystallized from refluxing DCM/Hex to give tert-butyl
(2-oxo-1,2,3,4,5,6-hexahydrobenzo[b]azocin-3-yl)carbamate
(80a). MS (
m/
z) 290.82 [M+H]
+.
Synthesis of tert-butyl (R)-(1,2,3,4,5,6-hexahydrobenzo[b]azocin-3-yl)carbamate and
(S)-(1,2,3,4,5,6-hexahydrobenzo[b]azocin-3-yl)carbamate (80b-1 and 80b-2):
[0625] To a mixture of tert-butyl (2-oxo-1,2,3,4,5,6-hexahydrobenzo[b]azocin-3-yl)carbamate
(
80a, 1.09 g, 3.75 mmol) in THF (10 mL) at 0 °C, was added 1.0 M borane-THF complex in
THF (22.5 mL, 22.5 mmol). After 5 minutes, the reaction mixture was warmed to room
temperature, and stirred overnight. Reaction mixture was cooled to 0 °C, quenched
with methanol, and ethyl acetate, concentrated, dissolved in water and extracted with
ethyl acetate (2x). Combined organic layer was washed with brine, dried over MgSO
4, filtered, concentrated, and purified by CombiFlash (40 g, 0 - 100% EtOAc/Hept) to
give a racemic mixture. MS (
m/
z) 277.00 [M+H]
+.
[0626] Racemic tert-butyl N-(1,2,3,4,5,6-hexahydro-1-benzazocin-3-yl)carbamate (260 mg)
was resolved using chiral SFC (AZ-H column, 15%MeOH) to give the title compounds,
assigned tentatively.
80b-1: peak 1, MS
(m/
z) 277.00 [M+H]
+;
80b-2: peak 2, MS (
m/
z) 277.00 [M+H]
+.
Synthesis of (6S)-1-(benzyloxy)-2,15-dioxo-N-(2,4,6-trifluorobenzyl)-2,6,7,8,9,15-hexahydro-6,14-methanobenzo[e]pyrido[1,2-a][1,4]diazecine-3-carboxamide
(80c):
[0627] A solution of tert-butyl (S)-(1,2,3,4,5,6-hexahydrobenzo[b]azocin-3-yl)carbamate
(
80b-1, 119 mg, 0.430 mmol) and trifluoroacetic acid (1.0 mL) in dichloromethane (3 mL)
was stirred for 1.5 hours. The reaction mixture was concentrated and dried under high
vacuum, and used in the next step without further purification.
[0628] The above residue was dissolved in methanol (0.5 mL) and methyl 3-benzyloxy-4-oxo-5-[(2,4,6-trifluorophenyl)methylcarbamoyl]pyran-2-carboxylate
(62.6 mg, 0.14 mmol) was added, followed by 0.5 M sodium methoxide (1.4 mL, 0.70 mmol).
Reaction mixture was heated at 50 °C for 2 hours. 2 M LiOH (0.35 mL, 0.70 mmol) was
added and the reaction was stirred at 50 °C until ester intermediate was consumed.
Reaction mixture was concentrated to ∼0.5mL, diluted with acetonitrile, and lyophilized
to give crude 3-benzyloxy-4-oxo-1-[(3S)-1,2,3,4,5,6-hexahydro-1-benzazocin-3-yl]-5-[(2,4,6-trifluorophenyl)methylcarbamoyl]pyridine-2-carboxylic
acid that was used in next step without further purification.
[0629] To a solution of crude 3-benzyloxy-4-oxo-1-[(3S)-1,2,3,4,5,6-hexahydro-1-benzazocin-3-yl]-5-[(2,4,6-trifluorophenyl)methylcarbamoyl]pyridine-2-carboxylic
acid in DMF (2.0 mL), was added HATU (66 mg, 0.28 mmol), and the reaction mixture
was stirred for 30 minutes. Reaction mixture was diluted with ethyl acetate, washed
with 5% lithium chloride solution (3x), brine, dried over MgSO
4, filtered and concentrated. Purification by CombiFlash (12 g, 30 - 100% EtOAc/Hept)
gave the title compound
(80c). MS
(m/
z) 574.13 [M+H]
+.
Synthesis of (6S)-1-hydroxy-2,15-dioxo-N-(2,4,6-trifluorobenzyl)-2,6,7,8,9,15-hexahydro-6,14-methanobenzo[e]pyrido[1,2-a][1,4]diazecine-3-carboxamide
(80-1):
[0630] (6S)-1-(benzyloxy)-2,15-dioxo-N-(2,4,6-trifluorobenzyl)-2,6,7,8,9,15-hexahydro-6,14-methanobenzo[e]pyrido[1,2-a][1,4]diazecine-3-carboxamide
(
80c, 44 mg, 0.077 mmol) and trifluoroacetic acid (0.80 mL, 10.45 mmol) in dichloromethane
(2.0 mL) was stirred at room temperature for 1.5 hours. Reaction mixture was concentrated
and purified by HPLC (Gemini, 5 - 100% ACN/H
2O + 0.1% TFA) to give the title compound
(80-1). MS (
m/
z) 574.13 [M+H]
+.
1H NMR (400 MHz, Methanol-d
4) δ 8.54 (s, 1H), 7.36 (dd, J = 20.3, 3.4 Hz, 4H), 6.92 (t, J = 8.3 Hz, 2H), 4.79
(s, 1H), 4.70 (s, 2H), 4.46 (d, J = 13.0 Hz, 1H), 4.05 - 3.87 (m, 1H), 3.07 (ddd,
J = 40.0, 17.6, 9.1 Hz, 2H), 2.54 (t, J = 13.0 Hz, 1H), 2.12 (dd, J = 16.1, 6.2 Hz,
1H), 1.95 (q, J = 11.3, 9.8 Hz, 2H).
Example 77b: Preparation of (6R)-1-hydroxy-2,15-dioxo-N-(2,4,6-trifluorobenzyl)-2,6,7,8,9,15-hexahydro-6,14-methanobenzo[e]pyrido[1,2-a][1,4]diazecine-3-carboxamide
(80-2):
[0631]

[0632] The title compound was prepared in a manner similar to
80-1 using tert-butyl (R)-(1,2,3,4,5,6-hexahydrobenzo[b]azocin-3-yl)carbamate
(80b-2) instead of tert-butyl (S)-(1,2,3,4,5,6-hexahydrobenzo[b]azocin-3-yl)carbamate (
80b-1). MS (
m/
z) 484.21 [M+H]
+.
1H NMR (400 MHz, Methanol-d
4) δ 8.53 (s, 1H), 7.36 (dd, J = 22.3, 5.0 Hz, 4H), 6.92 (t, J = 8.3 Hz, 2H), 4.80
(s, 1H), 4.69 (s, 2H), 4.46 (d, J = 13.2 Hz, 1H), 4.03 - 3.87 (m, 1H), 3.07 (ddt,
J = 25.1, 17.5, 9.6 Hz, 2H), 2.63 - 2.43 (m, 1H), 2.21 - 2.05 (m, 1H), 1.96 (p, J
= 11.3, 9.6 Hz, 2H).
Example 78: Preparation of (5R,8S)-5-fluoro-13-hydroxy-1,12-dioxo-N-(2,4,6-trifluorobenzyl)-1,3,4,5,6,7,8,12-octahydro-2,8-methanopyrido[1,2-a][1,4]diazecine-11-carboxamide
and (5S,8S)-5-fluoro-13-hydroxy-1,12-dioxo-N-(2,4,6-trifluorobenzyl)-1,3,4,5,6,7,8,12-octahydro-2,8-methanopyrido[1,2-a][1,4]diazecine-11-carboxamide
(81-1 and 81-2):
[0633]

Synthesis of benzyl (3S,6S)-3-(((benzyloxy)carbonyl)amino)-6-hydroxyazocane-1-carboxylate
and (3S,6R)-3-(((benzyloxy)carbonyl)amino)-6-hydroxyazocane-1-carboxylate (81a-1 and 81a-2)
[0634] The title compounds were prepared analogously to
53d-1 and
53d-2, using (S,Z)-3-(((benzyloxy)carbonyl)amino)-3,4,7,8-tetrahydroazocine-1(2H)-carboxylate
(44b-1) in place of benzyl (S)-3-(((benzyloxy)carbonyl)amino)-2,3,4,7-tetrahydro-1H-azepine-1-carboxylate
(
42e-1). MS
(m/
z) 413.3 [M+H]
+.
Synthesis of (5R,8S)-5-fluoro-13-hydroxy-1,12-dioxo-N-(2,4,6-trifluorobenzyl)-1,3,4,5,6,7,8,12-octahydro-2,8-methanopyrido[1.2-a][1,4]diazecine-11-carboxamide
and (5S,8S)-5-fluoro-13-hydroxy-1,12-dioxo-N-(2,4,6-trifluorobenzyl)-1,3,4,5,6,7,8,12-octahydro-2,8-methanopyrido[1,2-a][1,4]diazecine-11-carboxamide
(81-1 and 81-2)
[0635] The title compounds were prepared analogously to
53-1 and
53-2, using benzyl (3S,6S)-3-(((benzyloxy)carbonyl)amino)-6-hydroxyazocane-1-carboxylate
or (3 S,6R)-3-(((benzyloxy)carbonyl)amino)-6-hydroxyazocane-1-carboxylate
(81a-1 or
81a-2) in place of benzyl (3S)-3-(((benzyloxy)carbonyl)amino)-6-hydroxyazepane-1-carboxylate
(53c-1), and methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate
in place of methyl 3-(benzyloxy)-5-((2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate.
[0636] 81-1: MS (
m/
z) 454.2 [M+H]
+.
1H NMR (400 MHz, Chloroform-
d) δ 10.65 - 10.43 (m, 1H), 8.55 (s, 1H), 6.75 - 6.60 (m, 2H), 4.99 - 4.79 (m, 1H),
4.79 - 4.52 (m, 3H), 4.52 - 4.35 (m, 1H), 4.09 (dd, 1H), 3.54 (dd, 1H), 3.07 (ddd,
1H), 2.55 - 2.32 (m, 1H), 2.29 - 2.14 (m, 1H), 2.11 - 1.72 (m, 3H).
[0637] 81-2: MS (
m/
z) 454.2 [M+H]
+.
1H NMR (400 MHz, Chloroform-
d) δ 10.49 - 10.37 (m, 1H), 8.43 (s, 1H), 6.75 - 6.63 (m, 2H), 4.99 - 4.80 (m, 1H),
4.68 (qd, 2H), 4.52 - 4.43 (m, 1H), 4.42 - 4.33 (m, 1H), 4.06 - 3.96 (m, 1H), 3.80
(dd, 1H), 3.21 - 3.09 (m, 1H), 2.45 - 2.35 (m, 1H), 2.32 - 2.19 (m, 2H), 2.17 - 1.87
(m, 2H), 1.80 (q, 1H).
Example 79: Preparation of (6S,8S)-6,13-dihydroxy-1,12-dioxo-N-(2,4,6-trifluorobenzyl)-1,3,4,5,6,7,8,12-octahydro-2,8-methanopyrido[1,2-a][1,4]diazecine-11-carboxamide
and (6R,8S)-6,13-dihydroxy-1,12-dioxo-N-(2,4,6-trifluorobenzyl)-1,3,4,5,6,7,8,12-octahydro-2,8-methanopyrido[1,2-a][1,4]diazecine-11-carboxamide (82-1 and 82-2):
[0638]

Synthesis of rac-benzyl (3S)-3-(((benzyloxy)carbonyl)amino)-5-hydroxyazocane-1-carboxylate
and rac-benzyl (3S)-3-(((benzyloxy)carbonyl)amino)-6-hydroxyazocane-1-carboxylate
(82a-1 and 82a-2)
[0639] The title compounds were prepared analogously to
53c-1, using (S,Z)-3-(((benzyloxy)carbonyl)amino)-3,4,7,8-tetrahydroazocine-1(2H)-carboxylate
(
44b-1) in place of benzyl (S)-3-(((benzyloxy)carbonyl)amino)-2,3,4,7-tetrahydro-1H-azepine-1-carboxylate
(42e-1). MS (
m/
z) 413.3 [M+H]
+.
Synthesis of (6S,8S)-6,13-dihydroxy-1,12-dioxo-N-(2,4,6-trifluorobenzyl)-1,3,4,5,6,7,8,12-octahydro-2,8-methanopyrido[1,2-a][1,4]diazecine-11-carboxamide
and (6R,8S)-6,13-dihydroxy-1,12-dioxo-N-(2,4,6-trifluorobenzyl)-1,3,4,5,6,7,8,12-octahydro-2,8-methanopyrido[1,2-a][1,4]diazecine-11-carboxamide
(82-1 and 82-2):
[0640] The title compounds were prepared analogously to
53-1 and
53-2, using rac-benzyl (3S)-3-(((benzyloxy)carbonyl)amino)-5-hydroxyazocane-1-carboxylate
(
82a-1) in place of benzyl (
3S, 6R)-3-(((benzyloxy)carbonyl)amino)-6-fluoroazepane-1-carboxylate or benzyl (
3S,
6S)-3-(((benzyloxy)carbonyl)amino)-6-fluoroazepane-1-carboxylate (
53d-1 or
53d-2), and methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate
in place of methyl 3-(benzyloxy)-5-((2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate,
separating stereoisomers as the benzyl protected alcohol instead of prior to amide
coupling.
[0641] 82-1: MS
(m/
z) 452.2 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) δ 10.45 (s, 1H), 8.36 (s, 1H), 6.86 (t, 2H), 4.69 - 4.50 (m, 3H), 4.31 - 4.16 (m,
1H), 3.89 - 3.71 (m, 2H), 3.65 (dd, 1H), 3.04 - 2.91 (m, 1H), 2.39 - 2.24 (m, 1H),
2.13 - 1.78 (m, 4H), 1.73 - 1.52 (m, 1H).
[0642] 82-2: MS
(m/
z) 452.2 [M+H]
+.
1H NMR (400 MHz, Chloroform-
d) δ 10.46 (s, 1H), 8.44 (s, 1H), 6.75 - 6.58 (m, 1H), 4.69 (d, 2H), 4.51 - 4.35 (m,
2H), 4.26 - 4.13 (m, 1H), 4.04 - 3.76 (m, 1H), 3.08 - 2.85 (m, 1H), 2.59 - 2.47 (m,
1H), 2.27 - 1.61 (m, 7H).
Example 80: Preparation of (5S,8S)-5,13-dihydroxy-1,12-dioxo-N-(2,4,6-trifluorobenzyl)-1,3,4,5,6,7,8,12-octahydro-2,8-methanopyrido[1,2-a][1,4]diazecine-11-carboxamide
and (5R,8S)-5,13-dihydroxy-1,12-dioxo-N-(2,4,6-trifluorobenzyl)-1,3,4,5,6,7,8,12-octahydro-2,8-methanopyrido[1,2-a][1,4]diazecine-11-carboxamide
(83-1 and 83-2):
[0643]

[0644] The title compounds were prepared analogously to
53-1 and
53-2, using benzyl (3S,6S)-3-(((benzyloxy)carbonyl)amino)-6-hydroxyazocane-1-carboxylate
or benzyl (3S,6R)-3-(((benzyloxy)carbonyl)amino)-6-hydroxyazocane-1-carboxylate
(81a-2) in place of benzyl (
3S,
6R)-3-(((benzyloxy)carbonyl)amino)-6-fluoroazepane-1-carboxylate or benzyl (
3S,
6S)-3-(((benzyloxy)carbonyl)amino)-6-fluoroazepane-1-carboxylate (
53d-1 or
53d-2), and methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate
in place of methyl 3-(benzyloxy)-5-((2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate,
separating stereoisomers as the benzyl protected alcohol instead of prior to amide
coupling.
[0645] 83-1: MS
(m/
z) 452.2 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) δ 11.33 (s, 1H), 9.17 (s, 1H), 7.79 - 7.61 (m, 2H), 5.50 - 5.40 (m, 2H), 5.32 -
5.17 (m, 2H), 4.91 - 4.79 (m, 1H), 4.70 (d, 1H), 4.50 (d, 1H), 3.89 - 3.74 (m, 1H),
3.20 - 2.40 (m, 6H).
[0646] 83-1: MS (
m/
z) 452.2 [M+H].
1H NMR (400 MHz, Chloroform-
d) δ 10.59 - 10.42 (m, 1H), 8.43 (s, 1H), 6.77 - 6.50 (m, 2H), 4.69 (qd, 2H), 4.49
- 4.38 (m, 1H), 4.34 - 4.26 (m, 1H), 4.19 - 4.08 (m, 1H), 3.95 (d, 2H), 3.19 (ddd,
1H), 2.55 -2.35 (m, 1H), 2.24 - 2.08 (m, 1H), 2.09 - 1.55 (m, 3H), 1.27 (s, 1H).
Example 81: (3S,7S)-5-fluoro-12-hydroxy-3-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(84):
[0647]

Synthesis of benzyl (2S,6S)-6-((tert-butoxycarbonyl)amino)-2-methyl-4-oxoazepane-1-carboxylate (84a):
[0648] The title compound was synthesized in a similar manner to compound 53b-2, using benzyl
(2S,6S)-6-((tert-butoxycarbonyl)amino)-2-methyl-4-oxoazepane-1-carboxylate in place
of benzyl (S)-3-(((benzyloxy)carbonyl)amino)-2,3,4,7-tetrahydro-1H-azepine-1-carboxylate
(
42e-1). MS
(m/
z) 377.1 [M+H]
+.
Synthesis of benzyl (2S,6S)-6-((tert-butoxycarbonyl)amino)-4-hydroxy-2-methylazepane-1-carboxylate
(84b):
[0649] The title compound was synthesis in the similar manner to compound
53c-1 using (2S,6S)-6-((tert-butoxycarbonyl)amino)-2-methyl-4-oxoazepane-1-carboxylate
(84a) in place of benzyl (S)-3-(((benzyloxy)carbonyl)amino)-6-oxoazepane-1-carboxylate
(
53b-1). MS (m/z) 378.7 [M+H].
Synthesis of (2S,6S)-6-amino-2-methylazepan-4-ol (84d):
[0650] Benzyl (2S,6S)-6-((tert-butoxycarbonyl)amino)-4-hydroxy-2-methylazepane-1-carboxylate
(84b) (174 mg, 0.46 mmol) was dissolved in MeOH (5 mL). The reaction was fitted with a
hydrogen balloon, and evacuated and backfilled three times. The reaction was stirred
vigorously at room temperature for around 17 hrs under atmospheric pressure of hydrogen.
The reaction mixture was then filtered through a celite plug, the filtrate was concentrated
to dryness. The residue was put under hose vacuum overnight. The resulting product
(84c) was obtained. MS
(m/
z) 245.0 [M+H].
[0651] Crude product of tert-butyl ((3S,7S)-5-hydroxy-7-methylazepan-3-yl)carbamate
(84c) was dissolved in DCM (3 mL) at rt. TFA (3 mL) was added. Reaction mixture was stirred
at room temperature for 2 hrs. TFA and DCM was removed in vacuum to afford crude (2S,6S)-6-amino-2-methylazepan-4-ol
which was used directly for next step. MS (
m/
z) 145.0 [M+H].
Synthesis of (3S,7S)-12-(benzyloxy)-5-hydroxy-3-methyl-1, 11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(84e):
[0652] (2S,6S)-6-amino-2-methylazepan-4-ol (84d, 64 mg, 0.444 mmol) and methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate
(218 mg, 0.488 mmol) were mixed with MeOH (5 mL), and NaHCO
3 (1.3 g, 15 mmol) was added. Reaction mixture was stirred at room temperature for
17 hours. LiOH (5 M) (0.44 mL) was added, and the reaction mixture was heated at 60
°C for 6 hours. Reaction mixture was diluted with EtOAc (10 mL) and was treated with
saturated NH
4Cl/water (10 mL). Organic phase was separated. Aqueous layer was extracted with EtOAc
(10 mL). The combined organic phases were washed with water and brine, concentrated,
and purified on silica gel column (0-100% EtOAc / heptane) to afford the title compound
(84e). MS (
m/
z) 542.15 [M+H]
+.
Synthesis of (3S,7S)-12-(benzyloxy)-5-fluoro-3-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(84f):
[0653] (3S,7S)-12-(benzyloxy)-5-hydroxy-3-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(84e, 90 mg, 0.166 mmol) was dissolved in DCM (1.8 mL) at room temperature. DeoxoFluor
(367 mg, 1.66 mmol) was added dropwise. The reaction mixture was stirred at room temperature
for 17 hours, and then was diluted with EtOAc (5 mL). The resulting solution was poured
carefully to well stirred solution of NaHCO
3/water at 0 °C. The resulting bi-phase mixture was stirred for 30 min. The organic
phase was concentrated, and the residue purified on preparative TLC plates with EtOAc
/ heptane (1/3) to afford the title compound
(84f). MS
(m/
z) 544.20 [M+H]
+.
Synthesis of (3S,7S)-5-fluoro-12-hydroxy-3-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(84):
[0654] (3S,7S)-12-(benzyloxy)-5-fluoro-3-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(84f, 3 mg, 0.0055 mmol) was mixed with toluene (1.7 mL) at room temperature. TFA (1.76
mL) was added dropwise. Reaction mixture was stirred at room temperature for 17 hours,
and was concentrated to dryness. The residue was taken up in MeOH. After filtering
the solution, the filtrate was purified by preparative HPLC (column, Gemini 10µ C18
110A, AXI/; 250 x 21.2 mm) eluting with 5-100% acetonitrile in water (0.1% TFA) over
20 minutes to afford the title compound
(84). MS
(m/
z) 454.30 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3)
δ 10.38 (s, 1H), 8.43 (s, 1H), 5.5-5.2 (m, 1H), 5.00 - 4.32 (m, 4H), 3.69 (s, 2H),
2.5-2.1 (m, 4H), 1.25 (d, J = 6.6 Hz, 3H).
Example 82: (11S)-6-hydroxy-1-methyl-5,7-dioxo-N-(2,4,6-trifluorobenzyl)-1,5,7,11,12,13-hexahydro-4,11-methanopyrazolo[4,3-e]pyrido[1,2-a][1,4]diazonine-8-carboxamide
and (11S)-6-hydroxy-2-methyl-5,7-dioxo-N-(2,4,6-trifluorobenzyl)-2,5,7,11,12,13-hexahydro-4,11-methanopyrazolo[4,3-e]pyrido[1,2-a][1,4]diazonine-8-carboxamide
(85-1 and 85-2):
[0655]

Synthesis of benzyl (S)-6-(((benzyloxy)carbonyl)amino)-2-((dimethylamino)methylene)-3-oxoazepane-1-carboxylate
(85a):
[0656] Benzyl (3S)-3-(benzyloxycarbonylamino)-6-oxo-azepane-1-carboxylate (500 mg, 1.26
mmol) was dissolved in EtOH (3.5 mL) at room temperature and treated with 1,1-dimethoxy-N,N-dimethyl-methanamine
(DMF-DMA) (3.0 g, 25.2 mmol). The resulting mixture was heated at 80 °C for 16 hr.
The reaction was cooled to room temperature, concentrated, and used directly in the
next step. MS
(m/
z) 452.20 [M+H]
+.
Synthesis of benzyl (S)-6-(((benzyloxy)carbonyl)amino)-2-methyl-5,6,7,8-tetrahydropyrazolo[4,3-b]azepine-4(2H)-carboxylate
and benzyl (S)-6-(((benzyl oxy)carbonyl)amino)-1-methyl-5,6,7,8-tetrahydropyrazolo[4,3-b]azepine-4(1H)-carboxylate (85b-1 and 85b-2):
[0657] Benzyl (S)-6-(((benzyloxy)carbonyl)amino)-2-((dimethylamino)methylene)-3-oxoazepane-1-carboxylate
(85a) was dissolved in EtOH (15.0 mL), methyl hydrazine (2.61g, 56.7 mmol) was added, and
the resulting mixture was heated at 84 °C for 2 hrs. The mixture was cooled to room
temperature, and concentrated. The resulting residue was diluted with EtOAc, washed
with sat. NH
4Cl twice, dried over sodium sulfate, filtered, and concentrated. The residue was re-dissolved
in EtOAc, mixed with silica gel, concentrated to dryness, and purified by normal phase
chromatography (40 g silica gel, dry loading, 0-100% EtOAc/Hexanes then 0-10% MeOH/EtOAc)
to give the title compounds
(85b-1 and
85b-2)_as a mixture of regioisomers. MS
(m/
z) 435.20 [M+H]
+.
Synthesis of (S)-2-methyl-2,4,5,6,7,8-hexahydropyrazolo[4,3-b]azepin-6-amine and (S)-1-methyl-1,4,5,6,7,8-hexahydropyrazolo[4,3-b]azepin-6-amine
(85c-1 and 85c-2):
[0658] A mixture of benzyl (S)-6-(((benzyloxy)carbonyl)amino)-2-methyl-5,6,7,8-tetrahydropyrazolo[4,3-b]azepine-4(2H)-carboxylate
and benzyl (S)-6-(((benzyloxy)carbonyl)amino)-1-methyl-5,6,7,8-tetrahydropyrazolo[4,3-b]azepine-4(1H)-carboxylate
(85b-1 and
85b-2, 305 mg) was dissolved in EtOH (20.0 mL) at room temperature, 20% Pd/C (60.0 mg) was
added, and the resulting mixture was degassed and flushed with hydrogen three times,
before it was hydrogenated under hydrogen balloon overnight. The reaction was degassed
and flushed with nitrogen, filtered through Celite, filter cake rinsed with EtOH,
and concentrated to give the title compounds
(85c-1 and
85c-2), used in next step without further purification. MS
(m/
z) 167.11 [M+H]
+.
Synthesis of (11S)-6-hydroxy-2-methyl-5,7-dioxo-N-(2,4,6-trifluorobenzyl)-2,5,7,11,12,13-hexahydro-4,11-methanopyrazolo[4,3-e]pyrido[1,2-a][1,4]diazonine-8-carboxamide and
(11S)-6-hydroxy-1-methyl-5,7-dioxo-N-(2,4,6-trifluorobenzyl)-1,5,7,11,12,13-hexahydro-4,11-methanopyrazolo[4,3-e]pyrido[1,2-a][1,4]diazonine-8-carboxamide
(85-1 and 85-2):
[0659] The title compounds were synthesized in the same manner as compound
28, using (S)-2-methyl-2,4,5,6,7,8-hexahydropyrazolo[4,3-b]azepin-6-amine or (S)-1-methyl-1,4,5,6,7,8-hexahydropyrazolo[4,3-b]azepin-6-amine
(
85c-1 or
85c-2) in place of 1,4-oxazepan-6-amine, and methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate
in place of methyl 3-(benzyloxy)-5-((2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate,
with the regiochemistry of
85-1 confirmed by 2D-NMR.
[0660] 85-1: MS
(m/
z) 474.10 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.36 (t, J = 5.8 Hz, 1H), 8.59 (s, 1H), 7.81 (s, 1H), 7.28 - 7.17 (m, 2H), 4.92
(t, J = 7.9 Hz, 1H), 4.58 (d, J = 5.7 Hz, 2H), 4.09 (dd, J = 14.9, 1.6 Hz, 1H), 3.89
(dd, J = 14.8, 2.5 Hz, 1H), 3.73 (s, 3H), 2.83 - 2.66 (m, 2H), 2.64 - 2.54 (m, 1H),
1.66 - 1.52 (m, 1H).
[0661] 85-2: MS
(m/
z) 474.10 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.37 (t, J = 5.9 Hz, 1H), 8.58 (s, 1H), 7.41 (s, 1H), 7.28 - 7.16 (m, 2H), 4.94
(t, J = 8.3 Hz, 1H), 4.58 (d, J = 5.8 Hz, 2H), 4.08 (d, J = 14.7 Hz, 1H), 3.88 (d,
J = 12.9 Hz, 1H), 3.68 (s, 3H), 2.97 - 2.70 (m, 2H), 2.62-2.68 (m, 1H) 1.73 - 1.56
(m, 1H).
Example 83: Preparation of (12R)-3-fluoro-7-hydroxy-6,8-dioxo-N-(2,4,6-trifluorobenzyl)-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]pyrido[1,2-a][1,4]diazonine-9-carboxamide
and (12S)-3-fluoro-7-hydroxy-6,8-dioxo-N-(2,4,6-trifluorobenzyl)-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]pyrido[1,2-a][1,4]diazonine-9-carboxamide
(86-1 and 86-2):
[0662]

[0663] The title compounds were prepared similarly to compounds
43-1 and
43-2 using 8-fluoro-1,3,4,5-tetrahydro-2H-benzo[b]azepin-2-one in place of 6-fluoro-1,3,4,5-tetrahydro-2H-benzo[b]azepin-2-one.
[0664] 86-1: MS (
m/
z) 488.1 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.38 (t, J = 5.8 Hz, 1H), 8.59 (s, 1H), 7.39 (m, 1H), 7.29 - 7.15(m, 4H), 4.89
(m, 1H), 4.59 (m, 2H), 4.15 (dd, J = 14.8, 2.0 Hz, 1H), 3.80 (dd, J = 14.8, 2.1 Hz,
1H), 2.89 - 2.77 (m, 1H), 2.71 (m, 1H), 2.30-2.20 (m, 1H), 2.12 - 2.01 (m, 1H).
[0665] 86-2: MS
(m/
z) 488.1 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.38 (t, J = 5.8 Hz, 1H), 10.10 (s, 1H), 8.59 (s, 1H), 7.39 (dd, J = 8.5, 6.2
Hz, 1H), 7.29 - 7.20 (m, 2H), 7.24 - 7.10 (m, 2H), 4.93 - 4.86 (m, 1H), 4.59 (d, J
= 5.8 Hz, 2H), 4.15 (dd, J = 14.8, 2.0 Hz, 1H), 3.80 (dd, J = 14.8, 2.1 Hz, 1H), 2.92
- 2.77 (m, 1H), 2.77 - 2.65 (m, 1H), 2.25 (s, 1H), 2.06 (dd, J = 15.2, 6.7 Hz, 1H).
Example 84: (12S)-7-hydroxy-2-methyl-6,8-dioxo-N-(2,4,6-trifluorobenzyl)-2,4,6,8,12,13-hexahydro-5,12-methanopyrazolo[4,3-f]pyrido[1,2-a][1,4]diazonine-9-carboxamide
and (12S)-7-hydroxy-1-methyl-6,8-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,6,8,12,13-hexahydro-5,12-methanopyrazolo[4,3-f]pyrido[1,2-a][1,4]diazonine-9-carboxamide
(87-1 and 87-2):
[0666]

[0667] The title compounds were synthesized in a similar manner to compounds
85-1 and
85-2 using benzyl (3S)-3-(benzyloxycarbonylamino)-5-oxo-azepane-1-carboxylate in place
of benzyl (3S)-3-(benzyloxycarbonylamino)-6-oxo-azepane-1-carboxylate, and regiochemistry
based off the assignment of
85-1 and
85-2.
[0668] 87-1: MS
(m/
z) 474.10 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.38 (t,
J = 5.8 Hz, 1H), 8.55 (d,
J = 19.1 Hz, 1H), 7.58 (s, 1H), 7.30 - 7.14 (m, 2H), 5.20 (t,
J= 15.6 Hz, 1H), 5.01 (dd,
J = 8.0, 5.5 Hz, 1H), 4.58 (d,
J = 5.7 Hz, 2H), 4.20 - 3.76 (m, 2H), 3.74 - 3.63 (m, 4H), 3.53 (dd,
J = 16.3, 8.5 Hz, 1H), 2.73 (dd,
J = 16.4, 5.5 Hz, 1H).
[0669] 87-2: MS
(m/
z) 474.16 [M+H]
+.
1H NMR (400 MHz, Methanol-d
4) δ 8.56 (s, 1H), 7.53 (s, 1H), 6.92 (t, J = 8.4 Hz, 2H), 5.43 (d, J = 15.5 Hz, 1H),
4.69 (s, 2H), 4.29 (d, J = 15.6 Hz, 1H), 4.10 - 3.95 (m, 1H), 3.90 - 3.81 (m, 5H),
3.71 - 3.55 (m, 1H), 3.00 - 2.82 (m, 1H).
Example 85: Preparation of (6S)-9,10-difluoro-1-hydroxy-2,14-dioxo-N-(2,4,6-trifluorobenzyl)-2,7,12,14-tetrahydro-6H-6,13-methanobenzo[f]pyrido[1,2-a][1,4]diazonine-3-carboxamide
(88):
[0670]

Synthesis of (S)-2-((tert-butoxycarbonyl)amino)-3-(2-cyano-4,5-difluorophenyl)propanoic
acid (88a):
[0671] To a solution of (S)-2-amino-3-(2-cyano-4,5-difluorophenyl)propanoic acid (0.500
g, 2.21 mmol) and Boc
2O (0.724 g, 3.32 mmol) in THF (13 mL), was added NaHCO
3 (0.680 g, 8.09 mmol) and water (40 mL). The suspension was stirred overnight at rt.
The reaction mixture was diluted with Et
2O and the phases separated. The aqueous phase was acidified with 0.5 M HCl and extracted
with EtOAc (2x). The combined organic phases were washed with brine, dried over Na
2SO
4, filtered, and concentrated to afford the title compound, which was used without
further purification. MS (m/z) 325.17 [M-H]
-.
Synthesis of (6S)-9,10-difluoro-1-hydroxy-2,14-dioxo-N-(2,4,6-trifluorobenzyl)-2,7,12,14-tetrahydro-6H-6,
13-methanobenzo[f]pyrido[1,2-a][1,4]diazonine-3-carboxamide (88):
[0672] The title compound was prepared in a similar manner to compound
70, using (S)-2-((tert-butoxycarbonyl)amino)-3-(2-cyano-4,5-difluorophenyl)propanoic
acid
(88a) in place of (S)-2-((tert-butoxycarbonyl)amino)-3-(2-cyanophenyl)propanoic acid. MS
(m/z) 506.20 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.36 (t, J = 5.8 Hz, 1H), 8.51 (s, 1H), 7.41 (dd, J = 11.6, 8.2 Hz, 1H), 7.29
(dd, J = 11.6, 8.2 Hz, 1H), 7.22 (t, J = 8.6 Hz, 2H), 5.47 (d, J = 16.7 Hz, 1H), 4.98
(t, J = 7.1 Hz, 1H), 4.58 (d, J = 5.8 Hz, 2H), 4.44 (d, J = 16.7 Hz, 1H), 3.80 (d,
J = 14.5 Hz, 1H), 3.62 (dd, J = 14.8, 2.8 Hz, 1H), 3.37 (dd, J = 15.1, 7.3 Hz, 1H),
2.86 (dd, J = 15.2, 7.6 Hz, 1H).
19F NMR (376 MHz, DMSO-d
6) δ -109.26 (tt, J = 8.9, 6.3 Hz), -112.59 (t, J = 7.2 Hz), -141.08 (ddd, J = 20.0,
11.1, 8.3 Hz), -141.92 (dt, J = 21.0, 10.0 Hz).
Example 86: Preparation of (6S)-N-(2,4-difluorobenzyl)-9,10-difluoro-1-hydroxy-2,14-dioxo-2,7,12,14-tetrahydro-6H-6,13-methanobenzo[f]pyrido[1,2-a][1,4]diazonine-3-carboxamide
(89):
[0673]

[0674] The title compound was prepared in a similar manner to compound 88, using methyl
3-(benzyloxy)-5-((2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate instead
of methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate.
MS
(m/
z) 488.17 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.31 (t, J = 5.9 Hz, 1H), 8.52 (s, 1H), 7.42 (ddt, J = 11.7, 7.6, 3.7 Hz, 2H),
7.31 - 7.23 (m, 2H), 7.07 (td, J = 7.8, 2.2 Hz, 1H), 5.47 (d, J = 16.7 Hz, 1H), 5.00
(t, J = 7.3 Hz, 1H), 4.56 (d, J = 5.7 Hz, 2H), 4.44 (d, J = 16.7 Hz, 1H), 3.80 (d,
J = 14.6 Hz, 1H), 3.62 (dd, J = 14.7, 2.8 Hz, 1H), 3.38 (dd, J = 15.1, 7.3 Hz, 1H),
2.87 (dd, J = 15.1, 7.5 Hz, 1H).
19F NMR (376 MHz, DMSO-d
6) δ -112.37 (q, J = 7.7 Hz), -114.99 (q, J = 8.7 Hz), -141.07 (dt, J = 20.8, 9.9 Hz),
-141.90 (dd, J = 22.7, 10.5 Hz).
Example 87: Preparation of (12R)-N-(3-chloro-2,4-difluorobenzyl)-3-fluoro-7-hydroxy-6,8-dioxo-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]pyrido[1,2-a][1,4]diazonine-9-carboxamide
and (12S)-N-(3-chloro-2,4-difluorobenzyl)-3-fluoro-7-hydroxy-6,8-dioxo-6,8,13,14-tetrahydro-12H-5,12-methanobenzo[e]pyrido[1,2-a][1,4]diazonine-9-carboxamide
(90-1 and 90-2):
[0675]

[0676] The title compounds were prepared similarly to compounds 86-1 and 86-2, using methyl
3-(benzyloxy)-5-((3-chloro-2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate
in place of methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate.
[0677] 90-1: MS
(m/
z) 504.1 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 7.33 (m, 3H), 7.14 (m, 3H), 4.79 (m, 1H), 4.58 (m, 2H), 3.97 (m, 1H), 3.75 (m,
1H), 2.74 (m, 2H), 2.23 (m, 1H), 2.00 (m, 1H)..
[0678] 90-2: MS (
m/
z) 504.1 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 7.32 (m, 3H), 7.14 (m, 3H), 4.80 (m, 1H), 4.58 (m, 2H), 4.00 (m, 1H), 3.75 (m,
1H), 2.74 (m, 2H), 2.23 (m, 1H), 2.00 (m, 1H).
Example 88: Preparation of (4S,7S)-12-hydroxy-4-methoxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(91):
[0679]

Synthesis of (4S,7S)-12-(benzyloxy)-4-methoxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(91a):
[0680] NaH (60%, 3.3 mg) was added to a solution of (4S,7S)-12-(benzyloxy)-4-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(
79b-1, 11 mg, 0.021 mmol) in DMF (1 mL), at 0 °C. After 20 minutes, MeI (7 µL, 0.027 mmol,
1.3 eq.) was added, and the reaction was stirred at 0 °C for 20 minutes. The reaction
crude was diluted with EtOAc, and washed with sat. NaHCO
3 solution. The organic layer was concentrated, and purified via preparative HPLC,
eluting with 10-60% acetonitrile (0.1% TFA) in water (0.1% TFA) to give the title
compound. MS
(m/
z) 542.27 [M+H]
+.
Synthesis of (4S,7S)-12-hydroxy-4-methoxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(91):
[0681] TFA (0.5 mL) was added to a solution of (4S,7S)-12-(benzyloxy)-4-methoxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(91a, 2 mg) in toluene (0.5 mL). The reaction was stirred at r.t. for one hour. The reaction
mixture was concentrated, purified via preparative HPLC, eluting with 10-60% acetonitrile
in water (0.1% TFA) to afford the title compound (91). MS
(m/
z) 452.22 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) δ 8.39 (d, J = 7.4 Hz, 1H), 6.87 (t, J = 8.5 Hz, 1H), 6.68 (t, J = 8.5 Hz, 1H),
4.88 - 4.51 (m, 2H), 4.37 - 4.21 (m, 1H), 3.84 (d, J = 14.9 Hz, 1H), 3.71 (s, 1H),
3.60 - 3.46 (m, 1H), 3.30 (d, J = 36.8 Hz, 3H), 2.11 (s, 2H), 1.92 - 1.76 (m, 2H).
Example 89: Preparation of (6R)- and (6S)-N-(2,4-difluorobenzyl)-10,11-difluoro-1-hydroxy-2,14-dioxo-2,6,7,14-tetrahydro-6,13-methanobenzo[b]pyrido[2,1-f][1,4,7]oxadiazonine-3-carboxamide
(92-1, 92-2):
[0682]

Synthesis of 2-amino-4,5-difluorophenol (92b):
[0683] 10% Pd/C was added slowly to a solution of 4,5-difluoro-2-nitrophenol
(92a, 20 g, 114.2 mmols) in ethanol (200 mL) under inert atmosphere in a parr apparatus
and hydrogenated under 30 Psi at rt for 16 h. The reaction progress was monitored
by TLC (30% EtOAc in petroleum ether). The reaction mixture was filtered through a
celite pad and the celite pad was washed with ethanol. The filtrate was concentrated
under reduced pressure to give a crude residue treated with 5% EtOAc in hexane to
give 2-amino-4,5-difluorophenol
(92b). MS (m/z) 146.13 [M+H]
+.
Synthesis of tert-butyl (4,5-difluoro-2-hydroxyphenyl)carbamate(92c):
[0684] Boc anhydride (136.45 mmols, 31.3 mL, 1.5 equiv) was added to a stirred solution
of 2-amino-4,5-difluorophenol
(92b) (90.96 mmols, 13.20 g) in THF (132 mL) at room temperature. The resulting reaction
mixture was stirred at 60 °C for 16 h. The reaction mixture was concentrated under
vacuum, and purified by column chromatography (using 100-200 silica gel, 8% EtOAc/Hexane
as an eluent) to obtain tert-butyl (4,5-difluoro-2-hydroxyphenyl)carbamate
(92c). MS (
m/
z) 244.16 [M+H]
+.
Synthesis of tert-butyl 7,8-difluoro-3-methylene-3,4-dihydrobenzo[b][1,4]oxazepine-5(2H)-carboxylate
(92d):
[0685] NaH (60% in oil, 158.5 mmols, 6.3 g, 2.4 equiv) was added in one portion to a stirred
solution of 3-chloro-2-(chloromethyl)prop-1-ene (79.5 mmols, 9.2 mL, 1.2 equiv) in
DMF (178 mL) at 0 °C. To the reaction mixture was added a solution of tert-butyl (4,5-difluoro-2-hydroxyphenyl)carbamate
(92c, 66.23 mmols, 16.2 g) in THF (162 mL) dropwise at 5-10 °C. The resulting reaction
mixture was stirred at rt for 3 h. The mixture was diluted with cold water and extracted
with MTBE twice. The combined organic layer was washed with brine, dried over Na
2SO
4, concentrated, and purified by column chromatography (using 100-200 silica gel, eluent
5% EtOAc/Hexane) to obtain tert-butyl 7,8-difluoro-3-methylene-3,4-dihydrobenzo[b][1,4]oxazepine-5(2H)-carboxylate
(92d). MS
(m/
z) 298.24 [M+H]
+.
Synthesis of tert-butyl 7,8-difluoro-3-oxo-3,4-dihydrobenzo[b][1,4]oxazepine-5(2H)-carboxylate
(92e):
[0686] Ozone gas was bubbled through a solution of tert-butyl 7,8-difluoro-3-methylene-3,4-dihydrobenzo[b][1,4]oxazepine-5(2H)-carboxylate
(92d, 30.45 mmols, 12g) in DCM (1800 mL) at -78 °C until blue color persisted. Then, oxygen
gas passed through the reaction mixture to remove of excess of O
3 until the solution become colorless. To the reaction mixture was added dimethyl sulfide
at -78 °C. The resulting reaction mixture was stirred at rt for 16 h. The reaction
mixture was concentrated, and purified by column chromatography (using 100-200 silica
gel, 10% EtOAc/Hexane) to obtain tert-butyl 7,8-difluoro-3-oxo-3,4-dihydrobenzo[b][1,4]oxazepine-5(2H)-carboxylate
(92e). 1H NMR (400 MHz, Chloroform-d) δ 7.52 - 7.47 (m, 1H), 7.26-7.22 (m, 1H), 4.63 (s, 2H),
4.39 (s, 2H), 1.40 (s, 9H).
Synthesis of tert-butyl 3-(benzylamino)-7,8-difluoro-3,4-dihydrobenzo[b][1,4]oxazepine-5(2H)-carboxylate
(92f)
[0687] Benzylamine (53.5 mmols, 5.83 mL, 2 equiv) and acetic acid (2.96 mL) were added to
a stirred solution of tert-butyl 7,8-difluoro-3-oxo-3,4-dihydrobenzo[b][1,4]oxazepine-5(2H)-carboxylate
(92e, 26.73 mmols, 8 g) in dichloroethane (80 mL) and stirred at rt for 30 min. Sodium
triacetoxy borohydride (53.46 mmols 11.3 g, 2 equiv) was added in one portion under
N
2 atmosphere, and the resulting solution was stirred at rt for 2 h. The reaction mass
was cooled to 0 °C and quenched with cold water and diluted with dichloromethane.
The organic layer was separated and the aqueous layer was extracted with dichloromethane.
The combined organic layer was washed with brine solution, dried over anhydrous Na
2SO
4, filtered and evaporated. The crude was purified by column on silica gel (100-200
mesh) with 20% EtOAc in pet ether to give tert-butyl 3-(benzylamino)-7,8-difluoro-3,4-dihydrobenzo[b][1,4]oxazepine-5(2H)-carboxylate
(92f). MS
(m/
z) 391.37 [M+H]
+.
Synthesis of tert-butyl 3-amino-7,8-difluoro-3,4-dihydrobenzo[b][1,4]oxazepine-5(2H)-carboxylate (92g)
[0688] 10% Pd/C (1.0 g) was added slowly to a stirred solution of tert-butyl 3-(benzylamino)-7,8-difluoro-3,4-dihydrobenzo[b][1,4]oxazepine-5(2H)-carboxylate
(92f, 13.3 mmols, 5.2 g) in methanol (52 mL) under inert atmosphere. The reaction mixture
was stirred at rt under hydrogen gas balloon pressure for 16 h. The reaction mixture
was filtered through celite pad. The celite pad was washed with methanol and the filtrate
was concentrated and purified by column on silica gel (using 100-200 silica gel, 3%
MeOH in DCM), to give tert-butyl 3-amino-7,8-difluoro-3,4-dihydrobenzo[b][1,4]oxazepine-5(2H)-carboxylate
(92g). MS
(m/
z) 301.15 [M+H]
+.
[0689] 92g was separated into individual enantiomers by chiral HPLC (SFC chromatography on IG
4.6x100 mm 5 mic eluting with 15% EtOH-NH3, 3 mL/min flow rate, 100 bar, 40 °C, 5
uL) to provide
92g-1 and
92g-2.
Synthesis of tert-butyl 3-(3-(benzyloxy)-5-((2,4-difluorobenzyl)carbamoyl)-2-(methoxycarbonyl)-4-oxοpyridin-1(4H)-yl)-7,8-difluoro-3,4-dihydrobenzo[b][1,4]oxazepine-5(2H)-carboxylate (92i-1):
[0690] A mixture of tert-butyl 3-amino-7,8-difluoro-3,4-dihydro-2H-1,5-benzoxazepine-5-carboxylate
(
92g-1, 0.200 g, 0.666 mmol), methyl 3-benzyloxy-5-[(2,4-difluorophenyl) methylcarbamoyl]-4-oxo-pyran-2-carboxylate
(92h, 286 mg, 0.666 mmol) and sodium bicarbonate (559 mg, 6.66 mmol) in water (10 mL) and
MeOH (25 mL) was stirred at rt. After 2 hours, the mixture was concentrated, the residue
was diluted with water (40 mL), and the product was extracted with ethyl acetate (40
mL x 3). The organic extracts were combined, dried with magnesium sulfate, and concentrated.
The crude product was used for the next reaction without further purification assuming
100% yield. MS
(m/
z) 711.95 [M+H]
+.
Synthesis of methyl 3-(benzyloxy)-1-(7,8-difluoro-2,3,4,5-tetrahydrobenzo[b][1,4]oxazepin-3-yl)-5-((2,4-difluorobenzyl)carbamoyl)-4-oxo-1,4-dihydropyridine-2-carboxylate
(92j-1):
[0691] To a solution of the crude tert-butyl 3-[3-benzyloxy-5-[(2,4-difluorophenyl)methylcarbamoyl]-2-methoxycarbonyl-4-oxo-1-pyridyl]-7,8-difluoro-3,4-dihydro-2H-1,5-benzoxazepine-5-carboxylate
(
92i-1, 0.473 g, 0.665 mmol) in DCM (3 mL) was added 4 N HCl (4 M, 1.64 mL, 6.57 mmol) in
dioxane and the solution was stirred at room temperature for 2 hours. The solution
was concentrated and the crude product was used subsequently without further purification.
MS
(m/
z) 611.98 [M+H]
+.
N-(2,4-difluorobenzyl)-10,11-difluoro-1-hydroxy-2,14-dioxo-2,6,7,14-tetrahydro-6,13-methanobenzo[b]pyrido[2,1-f][1,4,7]oxadiazonine-3-carboxamide
(92-1):
[0692] The crude methyl 3-benzyloxy-5-[(2,4-difluorophenyl)methylcarbamoyl]-1-(7,8-difluoro-2,3,4,5-tetrahydro-1,5-benzoxazepin-3-yl)-4-oxo-pyridine-2-carboxylate
(
92j-1, 0.406 g, 0.664 mmol) was dissolved in methanol (50 mL). To the solution was added
DBU (0.505 g, 3.32 mmol) and the resulting solution was stirred at 50 °C. After 2
hours, the crude was concentrated. The residue was dissolved in DCM (1 mL), and purified
by silica gel column (40 g) eluting with DCM/MeOH to give 1-(benzyloxy)-N-(2,4-difluorobenzyl)-10,11-difluoro-2,14-dioxo-2,6,7,14-tetrahydro-6,13-methanobenzo[b]pyrido[2,1-f][1,4,7]oxadiazonine-3-carboxamide
(
92k-1). MS
(m/
z) 580.01 [M+H]
+.
[0693] The product (
92k-1) was then diluted in toluene (5 mL) and TFA was added (5 mL). The reaction was stirred
overnight. The mixture was concentrated, diluted in MeOH, filtered, and purified by
reverse phase column chromatography eluting with 0-100% acetonitrile/water (0.1% TFA)
to afford N-[(2,4-difluorophenyl)methyl]-4,5-difluoro-15-hydroxy-14,17-dioxo-8-oxa-1,11-diazatetracyclo[8.7.1.02,7.011,16]octadeca-2(7),3,5,12,15-pentaene-13-carboxamide
(92-1). MS
(m/
z) 488.38 [M+H]
+.
1H NMR (400 MHz, Chloroform-d) δ 10.06 (s, 1H), 8.44 (s, 1H), 7.46 - 7.31 (m, 2H),
7.20 - 7.06 (m, 1H), 7.01 - 6.92 (m, 1H), 6.87 - 6.77 (m, 2H), 4.69 (s, 1H), 4.65
(d, J = 6.3 Hz, 2H), 4.22 - 4.10 (m, 2H), 4.07 - 3.92 (m, 2H).
[0694] 92-2 was made in a similar fashion to
92-1, using
92g-2 instead of
92g-1.
[0695] MS
(m/
z) 490.16 [M+H]
+.
1H NMR (400 MHz, Chloroform-d) δ 10.06 (s, 1H), 8.44 (s, 1H), 7.46 - 7.32 (m, 2H),
7.02 - 6.92 (m, 1H), 6.87 - 6.72 (m, 2H), 4.77 - 4.56 (m, 4H), 4.21 - 4.09 (m, 2H),
4.08 - 3.96 (m, 1H), 3.11 (dd, J = 7.4, 4.9 Hz, 1H).
Example 90: Preparation of 6S,7R)-6-ethyl-6,12-dihydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4[diazonine-10-carboxamide
(93):
[0696]

[0697] The title compound was synthesized in a similar manner to compound 77, using methyl
3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate in
place of methyl 3-(benzyloxy)-5-((2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate.
MS
(m/
z) 466.46 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.46 (t, J = 5.8 Hz, 1H), 8.24 (s, 1H), 7.27 - 7.14 (m, 2H), 4.64 - 4.46 (m,
2H), 4.21 (s, 1H), 4.11 (dt, J = 12.8, 8.6 Hz, 1H), 3.82 (dd, J = 15.3, 2.9 Hz, 1H),
3.68 (dd, J = 15.2, 1.8 Hz, 1H), 3.14 - 2.93 (m, 1H), 1.76 (dt, J = 17.2, 8.5 Hz,
3H), 1.55 (dt, J = 14.3, 6.9 Hz, 2H), 1.09 (dd, J = 14.6, 11.8 Hz, 1H), 0.88 (t, J
= 7.3 Hz, 3H).
Example 91: Preparation of (6R)-1-hydroxy-2,14-dioxo-N-(2,4,6-trifluorobenzyl)-2,6,7,14-tetrahydro-6,13-methanobenzo[b]pyrido[2,1-f][1,4,7]thiadiazonine-3-carboxamide
(94):
[0698]

[0699] The title compound was prepared similarly to compound
43-1, using tert-butyl (R)-(4-oxo-2,3,4,5-tetrahydrobenzo[b][1,4]thiazepin-3-yl)carbamate
(
Organic Preparation and Procedures International, 34(4), 405-415, 2002) in place of 6-fluoro-2-oxo-2,3,4,5-tetrahydro-1H-benzo[b]azepin-3-yl)carbamate
(43c). MS
(m/
z) 488.1 [M+H]
+.
1H NMR (400 MHz, Chloroform-d) δ 10.33 (s, 1H), 8.53 (s, 1H), 7.54 (ddd, J = 10.7,
7.8, 1.4 Hz, 2H), 7.43 - 7.34 (m, 1H), 7.31 (dd, J = 7.7, 1.4 Hz, 1H), 6.66 (t, J
= 8.1 Hz, 2H), 4.77 (s, 1H), 4.67 (tt, J = 14.5, 7.1 Hz, 2H), 4.29 - 4.12 (m, 2H),
3.39 (dd, J = 15.3, 4.5 Hz, 1H), 3.24 (dd, J = 15.3, 6.0 Hz, 1H).
Example 92: Preparation of (6R)-1-hydroxy-2,14-dioxo-N-(2,4,6-trifluorobenzyl)-2,6,7,14-tetrahydro-6,13-methanobenzo[b]pyrido[2,1-f][1,4,7]thiadiazonine-3-carboxamide
8-oxide (95):
[0700]

Synthesis of (6R)-1-(benzyloxy)-2,14-dioxo-N-(2,4,6-trifluorobenzyl)-2,6,7,14-tetrahydro-6,13-methanobenzo[b]pyrido[2,1-f][1,4,7]thiadiazonine-3-carboxamide (95a):
[0701] The title compound was prepared in a similar manner to compound
94, and isolated as the benzyl-protected alcohol, before TFA deprotection.
Synthesis of (6R)-1-(benzyloxy)-2,14-dioxo-N-(2,4,6-trifluorobenzyl)-2,6,7,14-tetrahydro-6,13-methanobenzo[b]pyrido[2,1-f][1,4,7]thiadiazonine-3-carboxamide 8-oxide and (6R)-1-(benzyloxy)-2,14-dioxo-N-(2,4,6-trifluorobenzyl)-2,6,7,14-tetrahydro-6,13-methanobenzo
[b]pyrido[2,1-f][1,4,7]thiadiazonine-3-carboxamide 8,8-dioxide (95b-1 and 95b-2):
[0702] Into the solution of (6R)-1-(benzyloxy)-2,14-dioxo-N-(2,4,6-trifluorobenzyl)-2,6,7,14-tetrahydro-6,13-methanobenzo[b]pyrido[2,1-f][1,4,7]thiadiazonine-3-carboxamide
(95a, 135 mg, 0.235 mmol) in MeOH (16 mL), was added a solution of Oxone (395 mg) in water
(10 mL) at rt. After 1 hr, solvent was removed and extracted with ethyl acetate (100
mL). After removing the solvent, the residue was purified by silica-gel column to
provide the title compounds (
95b-1 and
95b-2). 95b-1: MS (
m/
z) 594.1 [M+H]
+; 95b-2: MS (
m/
z) 610.1 [M+H]
+.
Synthesis of (6R)-1-hydroxy-2,14-dioxo-N-(2,4,6-trifluorobenzyl)-2,6,7,14-tetrahydro-6,13-methanobenzo[b]pyrido[2,1-f][1,4,7]thiadiazonine-3-carboxamide 8-oxide (95):
[0703] To a solution of (6R)-1-(benzyloxy)-2,14-dioxo-N-(2,4,6-trifluorobenzyl)-2,6,7,14-tetrahydro-6,13-methanobenzo[b]pyrido[2,1-f][1,4,7]thiadiazonine-3-carboxamide
8-oxide (
95a-1, 78 mg, 0.131 mmol) in toluene (4 mL), was added TFA (1 mL) at rt. After stirring
overnight, the solvent and excess TFA was removed, and the residue was purified by
preparative HPLC to provide the title compound
(95). MS
(m/
z) 504.1 [M+H]
+.
1H NMR (400 MHz, Chloroform-d) δ 10.08 (s, 1H), 8.60 (s, 1H), 7.86 (d, J = 7.4 Hz,
1H), 7.66 (dt, J = 11.3, 3.7 Hz, 3H), 7.21 - 7.13 (m, 1H), 7.14 - 7.08 (m, 1H), 6.67
(t, J = 8.1 Hz, 2H), 5.03 (s, 1H), 4.68 (d, J = 5.8 Hz, 2H), 4.35 - 4.28 (m, 1H),
3.88 (dd, J = 14.3, 4.4 Hz, 1H), 3.39 (dd, J = 14.3, 5.9 Hz, 1H).
Example 93: Preparation of (6R)-1-hydroxy-2,14-dioxo-N-(2,4,6-trifluorobenzyl)-2,6,7,14-tetrahydro-6,13-methanobenzo[b]pyrido[2,1-f][1,4,7]thiadiazonine-3-carboxamide
8,8-dioxide (96):
[0704]

[0705] The title compound was prepared similarly to compound
95, using (6R)-1-(benzyloxy)-2,14-dioxo-N-(2,4,6-trifluorobenzyl)-2,6,7,14-tetrahydro-6,13-methanobenzo[b]pyrido[2,1-f][1,4,7]thiadiazonine-3-carboxamide
8,8-dioxide
(95b-2) in place of
(6R)-1-(benzyloxy)-2,14-dioxo-N-(2,4,6-trifluorobenzyl)-2,6,7,14-tetrahydro-6,13-methanobenzo[b]pyrido[2,1-f][1,4,7]thiadiazonine-3-carboxamide
8-oxide (
95b-1). MS (m/z) 520.1 [M+H]
+.
1HNMR (400 MHz, Chloroform-d) δ 10.16 (s, 1H), 8.61 (s, 1H), 8.12 (d, J = 7.8 Hz, 1H),
7.78 (d, J = 7.6 Hz, 1H), 7.73 (d, J = 7.7 Hz, 1H), 7.66 (t, J = 7.8 Hz, 1H), 6.67
(t, J = 8.1 Hz, 2H), 4.90 (s, 1H), 4.68 (t, J = 4.7 Hz, 2H), 4.48 (d, J = 15.0 Hz,
1H), 4.15 (d, J = 15.1 Hz, 1H), 3.89 (s, 2H).
Example 94: Preparation of (6S)-N-(3-chloro-2,4-difluorobenzyl)-1-hydroxy-2,15-dioxo-2,6,7,8,9,15-hexahydro-6,14-methanobenzo
[e] pyrido [1,2-a] [1,4]diazecine-3-carboxamide and (6R)-N-(3-chloro-2,4-difluorobenzyl)-1-hydroxy-2,15-dioxo-2,6,7,8,9,15-hexahydro-6,14-methanobenzo[e]pyrido[1,2-a][1,4]diazecine-3-carboxamide
(97-1 and 97-2):
[0706]

[0707] The title compounds were prepared in a manner similar to compounds
80-1 and
80-2, using methyl 3-(benzyloxy)-5-((3-chloro-2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate
instead of methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate.
[0708] 97-1: MS
(m/
z) 500.21 [M+H]
+.
1H NMR (400 MHz, Methanol-d
4) δ 8.52 (s, 1H), 7.44 - 7.27 (m, 5H), 7.09 (td, J = 8.7, 1.6 Hz, 1H), 4.77 (s, 1H),
4.67 (s, 2H), 4.50 - 4.39 (m, 1H), 3.95 (d, J = 14.6 Hz, 1H), 3.17 - 2.94 (m, 2H),
2.59 - 2.45 (m, 1H), 2.17 - 2.05 (m, 1H), 1.92 (t, J = 9.9 Hz, 2H).
[0709] 97-2: MS
(m/
z) 500.21 [M+H]
+.
1H NMR (400 MHz, Methanol-d
4) δ 8.52 (s, 1H), 7.44 - 7.27 (m, 5H), 7.09 (td, J = 8.7, 1.6 Hz, 1H), 4.77 (s, 1H),
4.67 (s, 2H), 4.50 - 4.39 (m, 1H), 3.95 (d, J = 14.6 Hz, 1H), 3.17 - 2.94 (m, 2H),
2.59 - 2.45 (m, 1H), 2.17 - 2.05 (m, 1H), 1.92 (t, J = 9.9 Hz, 2H).
Example 95: Preparation of (3S,7S)-12-hydroxy-3-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4[diazonine-10-carboxamide
(98):
[0710]

[0711] The title compound was synthesized in a manner similar to compound
52-1, using methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate
in place of methyl 3-(benzyloxy)-5-((2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate.
MS
(m/
z) 418.23 [M+H]
+.
1H NMR (400 MHz, Methanol-d
4) δ 8.46 (s, 1H), 7.41 (td, J = 8.5, 6.3 Hz, 1H), 7.02 - 6.84 (m, 2H), 4.72 - 4.63
(m, 1H), 4.61 (s, 2H), 4.60 - 4.52 (m, 1H), 3.75 (t, J = 1.6 Hz, 2H), 2.15 (td, J
= 15.7, 14.9, 7.9 Hz, 2H), 1.93 (ddt, J = 18.8, 15.6, 4.3 Hz, 1H), 1.74 (ddt, J =
15.3, 7.7, 3.9 Hz, 1H), 1.51 (dt, J = 14.8, 11.1 Hz, 1H), 1.27 (d, J = 6.7 Hz, 3H),
1.22 - 1.04 (m, 1H).
19F NMR (376 MHz, Methanol-d
4) δ -78.28, -113.93 (ddd, J = 15.4, 8.5, 6.7 Hz), -116.86 (q, J = 8.4 Hz).
Example 96: Preparation of (7S)-12-hydroxy-6-methoxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
and (7R)-12-hydroxy-6-methoxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(99-1 and 99-2):
[0712]

Synthesis of ethyl 12-(benzyloxy)-6-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxylate
(99a):
[0713] Ethyl 12-(benzyloxy)-6-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxylate
was prepared in a manner similar to compound
28a, using 3-aminoazepan-4-ol dihydrobromide in place of 1,4-oxazepan-6-amine, and diethyl
3-(benzyloxy)-4-oxo-4H-pyran-2,5-dicarboxylate in place of methyl 3-(benzyloxy)-5-((3-chloro-2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate,
then follow up DMP oxidation and NaBH
4 reduction (selectively) to afford 99a as a racemic mixture. MS (m/z) 413.24 [M+H]
+.
Synthesis of 12-(benzyloxy)-6-methoxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxylic
acid (99b):
[0714] Ethyl (6R)-12-(benzyloxy)-6-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxylate
(99a, 255 mg, 0.62 mmol) was dissolved in dry DMF (10 mL) and cooled to 0 °C. NaH (60%
dispersion in mineral oil, 50 mg, 1.24 mmol) was added, and the mixture was stirred
for 30 min, before iodomethane (0.077 mL, 1.24 mmol) was added. The reaction mixture
was stirred at 0 °C for 20 min, then quenched with saturated aqueous NH
4Cl, and extracted with EtOAc. The combined organic extracts were dried over MgSO
4, filtered, and concentrated. The residue was purified by RP-HPLC eluting with ACN/water
(w/0.1 % TFA) to afford ethyl 12-(benzyloxy)-6-methoxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxylate.
This product was stirred with LiOH (67 mg, 1.6 mmol) in THF/MeOH/water (3 mL/2 mL/1
mL). After 20 minutes, the pH was adjusted to 3 with 1 N hydrochloric acid and the
product was extracted into EtOAc. The combined organic extracts were dried over MgSO
4, filtered, and concentrated to dryness to afford the title product (99b), which was
carried forward without further purification. MS (m/z) 399.22 [M+H]
+.
Synthesis of 12-(benzyloxy)-6-methoxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(99c):
[0715] 12-(benzyloxy)-6-methoxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxylic
acid
(99b, 115 mg, 0.29 mmol) and HATU (219 mg, 0.58 mmol) in 5 mL of methylene chloride was
stirred at room temperature as N,N-Diisopropylethylamine (0.25 mL, 1.44 mmol) was
added slowly, followed by slow addition of (2,4,6-trifluorophenyl)methanamine (46.5
mg, 0.29 mmol) in 0.2 mL of DMF. After completion of the reaction, the mixture was
partitioned between methylene chloride and water. The organic layer was separated,
and washed with brine, dried over MgSO
4, filtered, and concentrated. The residue was purified by preparatory HPLC eluting
with (MeCN/water with 0.1% TFA), and lyophilized to provide the title compound
(99c). MS (m/z) 542.32 [M+H]
+.
Synthesis of (7S)- and (7R)-12-hydroxy-6-methoxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide (99-1 and 99-2):
[0716] 12-(benzyloxy)-6-methoxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(98c) was separated into its individual diastereomers by preparative SFC chromatography
on an OD-H column using EtOH-NH
3 cosolvent. The separated enantiomers were dissolved in 1.5 mL of toluene and 1.5
mL of TFA and stirred at room temperature for 1 h. After concentration, purification
by preparatory HPLC eluting with (MeCN/water with 0.1% TFA), provided the title compounds.
[0717] 99-1: MS
(m/
z) 452.18 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.71 (s, 1H), 10.40 (t, J = 5.8 Hz, 1H), 8.24 (s, 1H), 7.20 (q, J = 8.7 Hz, 2H),
4.87 (s, 1H), 4.56 (d, J = 5.7 Hz, 2H), 4.20 - 4.10 (m, 1H), 3.94 - 3.85 (m, 1H),
3.63 (d, J = 15.1 Hz, 1H), 3.53 (d, J = 11.4 Hz, 1H), 3.33 (s, 1H), 3.12 (dd, J =
13.0, 7.4 Hz, 1H), 1.89 (d, J = 12.3 Hz, 2H), 1.81 (s, 1H), 0.87 (t, J = 12.1 Hz,
1H).
[0718] 99-2: MS
(m/
z) 452.19 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.71 (s, 1H), 10.40 (t, J = 5.8 Hz, 1H), 8.24 (s, 1H), 7.28 - 7.15 (m, 2H), 4.87
(s, 1H), 4.56 (d, J = 5.8 Hz, 2H), 4.20 - 4.08 (m, 1H), 3.90 (dd, J = 15.0, 3.1 Hz,
1H), 3.63 (dd, J = 15.1, 1.7 Hz, 1H), 3.56-3.46 (m, 1H), 3.35 (s, 3H), 3.12 (dd, J
= 12.9, 7.3 Hz, 1H), 1.89 (d, J = 12.6 Hz, 2H), 1.86 - 1.73 (m, 1H), 0.89 (q, J =
12.0 Hz, 1H).
Example 97: Preparation of (6S,7R)-6-ethyl-12-hydroxy-6-methoxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(100):
[0719]

[0720] The title compound was prepared in a manner similar to compounds
99-1 and
99-2 using (3R,4S)-3-amino-4-ethylazepan-4-ol
(77a) in place of 3-aminoazepan-4-ol;dihydrobromide, stereoisomer confirmed by crystal
structure. MS (m/z) 480.17 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.71 (s, 1H), 10.39 (t, J = 5.8 Hz, 1H), 8.21 (s, 1H), 7.19 (t, J = 8.7 Hz, 2H),
4.53 (d, J = 5.0 Hz, 2H), 4.49 (s, 1H), 4.20 - 4.06 (m, 1H), 3.74 (t, J = 16.4 Hz,
2H), 3.07 (s, 1H), 2.93 (s, 4H), 1.75 (ddd, J = 46.6, 16.0, 9.3 Hz, 5H), 1.10 (s,
0H), 0.89 (t, J = 7.2 Hz, 3H).
Example 98: Preparation of (7S)-12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(101):
[0721]

[0722] The title compound was prepared in a manner similar to compound
47-1, using methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate
in place of methyl 3-(benzyloxy)-5-((2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate.
MS (m/z) 420.21 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) δ 10.34 (s, 1H), 8.41 (s, 1H), 6.86 (t, J = 8.5 Hz, 2H), 5.61 (m, 2H), 4.95 (d,
J = 18.1 Hz, 1H), 4.77 (d, J = 9.1 Hz, 1H), 4.61 (d, J = 4.7 Hz, 2H), 3.89 (m, 1H),
3.83 - 3.65 (m, 2H), 3.03 (dt, J = 16.7, 8.0 Hz, 1H), 2.40 (d, J = 18.6 Hz, 1H).
Example 99: Preparation of (7S)-12-hydroxy-1,4,11-trioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(102):
[0723]

[0724] The title compound was synthesized using a procedure similar to compound
78, starting with benzyl (S)-3-(((benzyloxy)carbonyl)amino)-5-oxoazepane-1-carboxylate
(53b-2) in place of benzyl (S)-3-(((benzyloxy)carbonyl)amino)-6-oxoazepane-1-carboxylate
(
53b-1). MS
(m/
z) 436.25 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) δ 10.29 (s, 1H), 8.41 (s, 1H), 7.06 - 6.77 (m, 2H), 4.62 (d, J = 5.8 Hz, 2H), 4.39
(dt, J = 10.6, 7.9 Hz, 1H), 4.10 (d, J = 14.9 Hz, 1H), 3.96 (d, J = 15.0 Hz, 1H),
3.32 - 3.08 (m, 2H), 2.90 - 2.44 (m, 4H).
Example 100: Preparation of (5R,7S)-12-hydroxy-5-methoxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
and (5S,7S)-12-hydroxy-5-methoxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(103-1 and 103-2):
[0725]

[0726] (7S)-12-(benzyloxy)-1,5,11-trioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(103a) was prepared in a manner similar to compound
102, and isolated as the benzyl-protected alcohol, before TFA deprotection.
[0727] The title compounds were synthesized using sequential procedures similar to compounds
79b-1 and
79b-2, followed by compound
91 starting with (7S)-12-(benzyloxy)-1,5,11-trioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(103a) in place of (7S)-12-(benzyloxy)-1,4,11-trioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(79a), stereochemistry drawn arbitrarily.
[0728] 103-1: MS
(m/
z) 452.22 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) δ 8.39 (d, J = 7.4 Hz, 1H), 6.87 (t, J = 8.5 Hz, 1H), 6.68 (t, J = 8.5 Hz, 1H),
4.88 - 4.51 (m, 2H), 4.37 - 4.21 (m, 1H), 3.84 (d, J = 14.9 Hz, 1H), 3.71 (s, 1H),
3.60 - 3.46 (m, 1H), 3.30 (d, J = 36.8 Hz, 3H), 2.11 (s, 2H), 1.92- 1.76 (m, 2H).
[0729] 103-2: MS
(m/
z) 452.22 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) δ 8.39 (d, J = 7.4 Hz, 1H), 6.87 (t, J = 8.5 Hz, 1H), 6.68 (t, J = 8.5 Hz, 1H),
4.88 - 4.51 (m, 2H), 4.37 - 4.21 (m, 1H), 3.84 (d, J = 14.9 Hz, 1H), 3.71 (s, 1H),
3.60 - 3.46 (m, 1H), 3.30 (d, J = 36.8 Hz, 3H), 2.11 (s, 2H), 1.92- 1.76 (m, 2H).
Example 101: Preparation of (11S)-6-hydroxy-5,7-dioxo-N-(2,4,6-trifluorobenzyl)-5,7,12,13-tetrahydro-11H-4,11-methanopyrido[1,2-a]thieno[3,2-e][1,4]diazonine-8-carboxamide
and (11S)-6-hydroxy-5,7-dioxo-N-(2,4,6-trifluorobenzyl)-5,7,12,13-tetrahydro-11H-4,11-methanopyrido[1,2-a]thieno[3,2-e][1,4]diazonine-8-carboxamide
(104-1 and 104-2):
[0730]

[0731] The title compounds were prepared in a manner similar to compounds
80-1 and
80-2, using tert-butyl (S)- or (R)-(5,6,7,8-tetrahydro-4H-thieno[3,2-b]azepin-6-yl)carbamate
(resolved using SFC (AZ-H column, 15%MeOH)) in place of tert-butyl (S)- or (R)-(1,2,3,4,5,6-hexahydrobenzo[b]azocin-3-yl)carbamate
(80b-1 or
80b-2).
[0732] 104-1: MS
(m/
z) 476.16 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.41 - 10.15 (m, 1H), 8.59 (s, 1H), 7.34 (d, J = 5.3 Hz, 1H), 7.22 (t, J = 8.7
Hz, 2H), 7.05 (d, J = 5.3 Hz, 1H), 4.95 (t, J = 7.5 Hz, 1H), 4.58 (s, 2H), 4.14 -
3.92 (m, 2H), 3.05 - 2.83 (m, 2H), 2.72 - 2.55 (m, 2H), 1.86 - 1.69 (m, 1H).
[0733] 104-2: MS
(m/
z) 476.21 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.52 - 10.09 (m, 1H), 8.59 (s, 1H), 7.39 - 7.28 (m, 1H), 7.22 (t, J = 8.6 Hz,
2H), 7.05 (d, J = 5.1 Hz, 1H), 4.95 (t, J = 8.3 Hz, 1H), 4.58 (s, 2H), 4.13 - 3.93
(m, 2H), 3.06 - 2.82 (m, 2H), 2.72 - 2.55 (m, 2H), 1.87 - 1.66 (m, 1H).
Example 102: Preparation of N-(2,4-difluorobenzyl)-6-fluoro-12-hydroxy-6-methyl-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(105):
[0734]

Synthesis of benzyl 3 -(((benzyloxy)carbonyl)amino)-4-ethyl-4-hydroxyazepane-1-carboxylate
(105a):
[0735] Ethyl Grignard (1 M in THF, 5.17 mL, 5.17 mmol) was added to a solution of benzyl
3-(((benzyloxy)carbonyl)amino)-4-oxoazepane-1-carboxylate
(14c, 820 mg, 2.07 mmol) in THF (10 mL) at 0 °C. The reaction was stirred for 30 min and
stored in the refrigerator overnight. The reaction was allowed to warm to room temperature,
stirred for 1 h, then quenched with saturated aqueous NH
4Cl. It was extracted into ethyl acetate, washed with brine, dried over MgSO
4, filtered, and evaporated to dryness. The residue was purified by silica gel chromatography
eluting with ethyl acetate in hexane to afford the title product
(105a). MS
(m/
z) 427.53 [M+H]
+.
Synthesis of benzyl 3-(((benzyloxy )carbonyl)amino)-4-ethyl-4-fluoroazepane-1-carboxylate
and benzyl (Z)-3-(((benzyloxy)carbonyl)amino)-4-ethylideneazepane-1-carboxylate (105b-1 and 105b-2):
[0736] The title compounds were prepared in a manner similar to compound
13a, using benzyl 3-(((benzyloxy)carbonyl)amino)-4-ethyl-4-hydroxyazepane-1-carboxylate
(105a) in place of 12-(benzyloxy)-N-(2,4-difluorobenzyl)-6-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(12a), olefin regiochemistry drawn arbitrarily.
105b-1: MS
(m/
z) 429.39 [M+H]
+;
105b-2: 409.88 [M+H]
+.
Synthesis of N-(2,4-difluorobenzyl)-6-ethyl-6-fluoro-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(105):
[0737] The title compound was prepared in a manner similar to compound
60-1, using benzyl 3-(((benzyloxy)carbonyl)amino)-4-ethyl-4-fluoroazepane-1-carboxylate
(
105b-1) in place of benzyl (3R,4S)-3-(((benzyloxy)carbonyl)amino)-4-fluoro-4-methylazepane-1-carboxylate
(60b-2). MS
(m/
z) 450.15 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.83 (s, 1H), 10.32 (t, J = 5.9 Hz, 1H), 8.62 (s, 1H), 7.42 (td, J = 8.7, 6.6
Hz, 1H), 7.25 (ddd, J = 10.6, 9.3, 2.6 Hz, 1H), 7.13 - 7.03 (m, 1H), 4.81 (d, J =
11.8 Hz, 1H), 4.63 - 4.48 (m, 2H), 4.17 (q, J = 11.2 Hz, 1H), 3.92 (dd, J = 15.0,
2.6 Hz, 1H), 3.81 (dd, J = 14.9, 1.9 Hz, 1H), 3.17 (dd, J = 13.0, 7.7 Hz, 1H), 2.09
(dd, J = 14.9, 8.0 Hz, 2H), 1.93 - 1.72 (m, 2H), 1.36 (ddd, J = 29.4, 14.4, 7.3 Hz,
1H), 1.26 - 1.04 (m, 1H), 0.80 (t, J = 7.3 Hz, 3H).
Example 103: Preparation of N-(2,4-difluorobenzyl)-6-ethyl-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(106):
[0738]

[0739] The title compound was prepared in a manner similar to compound
60-1, using benzyl (Z)-3-(((benzyloxy)carbonyl)amino)-4-ethylideneazepane-1-carboxylate
(105b-2) in place of benzyl (3R,4S)-3-(((benzyloxy)carbonyl)amino)-4-fluoro-4-methylazepane-1-carboxylate
(60b-2). MS
(m/
z) 432.22 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.40 (t, J = 5.9 Hz, 1H), 8.44 (s, 1H), 7.42 (td, J = 8.7, 6.6 Hz, 1H), 7.25
(ddd, J = 10.6, 9.3, 2.6 Hz, 1H), 7.12 - 7.02 (m, 1H), 4.55 (d, J = 5.9 Hz, 2H), 4.46
- 4.40 (m, 1H), 4.16 (dt, J = 12.3, 5.8 Hz, 1H), 3.79 (qd, J = 15.0, 2.3 Hz, 2H),
3.04 (dt, J = 13.0, 6.2 Hz, 1H), 1.83 (s, 1H), 1.66 (d, J = 13.4 Hz, 4H), 1.50 - 1.29
(m, 2H), 0.92 (t, J = 7.2 Hz, 3H).
Example 104: Preparation of (5S,7S)-5,12-dihydroxy-5-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
and (5R,7S)-5,12-dihydroxy-5-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(107-1 and 107-2):
[0740]

Synthesis of (5S,7S)-12-(benzyloxy)-5-hydroxy-5-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][,4]diazonine-10-carboxamide
and (5R,7S)-12-(benzyloxy)-5-hydroxy-5-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-al[1,4]diazonine-10-carboxamide
(107a-1 and 107a-2)
[0741] At 0 °C, MeMgBr (1.4 M in THF, 0.124 mL, 0.37 mmol) was added to (5R,7S)-5,12-dihydroxy-5-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(103a, 65 mg, 0.124 mmol) in anhydrous THF (3 mL), and stirred for 3 hours. The reaction
was quenched with water, and diluted with EtOAc. The organic layer was concentrated
and purified via preparative HPLC, eluting with 10-60% acetonitrile in water (0.1%
TFA) to give the title compounds
(107a-1 and 107a-2) as separated diastereomers, stereoisomers assigned speculatively. MS (
m/
z) 542.17 [M+H]
+.
Synthesis of (5S,7S)-5,12-dihydroxy-5-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][,4]diazonine-10-carboxamide
and (5R,7S)-5,12-dihydroxy-5-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(107-1 and 107-2)
[0742] TFA (0.5 mL) was added to a solution of (5S,7S)-12-(benzyloxy)-5-hydroxy-5-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
or (5R,7S)-12-(benzyloxy)-5-hydroxy-5-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(107a-1 or
107a-2, 3mg) in toluene (0.5 mL) at rt. The reaction was stirred for one hour, concentrated
down, and purified via preparative HPLC, eluting with 10-60% acetonitrile in water
(0.1% TFA), to give the title compounds
(107-1 and
107-2), stereoisomers assigned speculatively.
[0743] 107-1: MS
(m/
z) 452.15 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) δ 10.46 (s, 1H), 8.37 (s, 1H), 7.00 - 6.78 (m, 2H), 4.61 (d, J = 5.3 Hz, 2H), 4.56
(m, 1H), 4.19 (td, J = 12.3, 6.6 Hz, 1H), 3.85 (d, J = 14.8 Hz, 1H), 3.68 (d, J =
14.7 Hz, 1H), 3.21 (dd, J = 13.2, 7.4 Hz, 1H), 2.26 - 2.06 (m, 2H), 2.02 (d, J = 5.4
Hz, 1H), 1.95 - 1.79 (m, 1H), 1.22 (s, 3H).
[0744] 107-2: MS
(m/
z) 452.15 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) δ 10.36 (s, 1H), 8.37 (s, 1H), 6.87 (t, J = 8.5 Hz, 2H), 4.62 (m, 2H), 4.46 - 4.12
(m, 2H), 3.79 (d, J = 14.0 Hz, 1H), 3.16 (m, 2H), 2.63 (dd, J = 15.9, 9.2 Hz, 1H),
1.94 - 1.67 (m, 2H), 1.58 (dd, J = 15.9, 4.3 Hz, 1H), 1.24 (s, 3H).
Example 105: Preparation of (3S,4R,7S)-12-hydroxy-3,4-dimethyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
and (3S,4S,7S)-12-hydroxy-3,4-dimethyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(108-1 and 108-2):
[0745]

Synthesis of benzyl (2S,6S)-6-((tert-butoxycarbonyl)amino)-2-methyl-3-methyleneazepane-1-carboxylate
(108a):
[0746] To a solution of benzyl (2S,6S)-6-((tert-butoxycarbonyl)amino)-2-methyl-3-oxoazepane-1-carboxylate
(240 mg, 0.638 mmol) in THF (10 mL) at 0 °C, was added Tebbe reagent (6.4 mL, 0.5M
in toluene). The reaction mixture was allowed to warm to rt and stirred overnight.
The reaction mixture was cooled to 0 °C, and was quenched by adding sat. NaHCO
3 slowly. The mixture was extracted with EtOAc. The organic phase was dried over MgSO
4, filtered and concentrated down. The residue was purified by silica gel column chromatography,
eluting with 0-50% EtOAc/hexane to give the title compound
(108a).
Synthesis of tert-butyl ((3 S, 7S)-6,7-dimethylazepan-3-yl)carbamate (108b):
[0747] A mixture of benzyl (2S,6S)-6-((tert-butoxycarbonyl)amino)-2-methyl-3-methyleneazepane-1-carboxylate
(108a, 90 mg, 0.24 mmol) and Pd/C (23.5 mg, 0.22 mmol) in MeOH (5 mL) under H
2 balloon was stirred at rt for 1 h. The reaction mixture was filtered, the filtrate
was concentrated down and the residue used subsequently, without further purification.
Synthesis of (3S,4R,7S)- and (3S,4S,7S)-12-hydroxy-3,4-dimethyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(108-1 and 108-2):
[0748] The title compounds were synthesized in a manner similar to compounds
40-1 and
40-2, using tert-butyl ((3S,7S)-6,7-dimethylazepan-3-yl)carbamate
(108b) in place of tert-butyl ((1S,6R)-2-azabicyclo[4.2. 1]nonan-4-yl)carbamate
(40e).
[0749] 108-1: MS
(m/
z) 450.24 [M+H]
+.
1H NMR (400 MHz, Methanol-d
4) δ 8.43 (s, 1H), 6.89 (t, J = 8.5 Hz, 2H), 4.66 (s, 3H), 4.19 - 4.01 (m, 1H), 3.89
- 3.67 (m, 2H), 2.06 (q, J = 16.0, 15.5 Hz, 2H), 1.74 (h, J = 6.7 Hz, 1H), 1.50 (d,
J = 15.3 Hz, 1H), 1.32 (d, J = 6.7 Hz, 3H), 1.29 - 1.20 (m, 1H), 1.05 (d, J = 6.7
Hz, 3H).
[0750] 108-2: MS
(m/
z) 450.22 [M+H]
+.
1H NMR (400 MHz, Methanol-d
4) δ 8.42 (s, 1H), 6.88 (t, J = 8.5 Hz, 2H), 4.78 (t, J = 6.9 Hz, 2H), 4.65 (s, 2H),
3.87 (d, J = 14.2 Hz, 1H), 3.60 (d, J = 14.5 Hz, 1H), 2.59 (s, 1H), 2.06 (q, J = 7.8
Hz, 1H), 1.86 - 1.68 (m, 1H), 1.48 (t, J = 13.7 Hz, 2H), 1.23 (d, J = 7.1 Hz, 3H),
0.95 (d, J = 7.1 Hz, 3H).
Example 106a: Preparation of (7R)-12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(109-1):
[0751]

Synthesis of tert-butyl (R)-3-(2,2,2-trichloroacetamido)-2,3,6,7-tetrahydro-1H-azepine-1-carboxylate
(109a-1) and tert-butyl (S)-3-(2,2,2-trichloroacetamido)-2,3,6,7-tetrahydro-1H-azepine-1-carboxylate
(109a-2):
[0752] tert-butyl 3-(2,2,2-trichloroacetamido)-2,3,6,7-tetrahydro-1H-azepine-1-carboxylate
(prepared according to procedure in
Org. Biomol. Chem., 2012, 10, 8251 - 8259) was separated into its individual enantiomers by chiral SFC using CHIRALPAK
IG column to afford the title compounds
(109a-1 and
109a-2).
[0753] 109a-1, peak 1: MS
(m/
z): 301.0, 303.0 [M+H]
-, ee: 99.66%.[α]20D = - 110.18(
c0.50, CHCl3).
1H NMR (400 MHz, CDCl
3): δ 8.44 (br, 0.65H), 6.80 (br, 0.30H) 5.92-5.67 (m,2H), 4.65-4.55 (m, 1H), 4.13-4.10
(m, 0.68H), 3.84-3.37 (m, 2.7H), 3.18-3.15 (m, 0.70H), 2.38-2.25 (m, 2H), 1.46 (s,
9H).
[0754] 109a-2, peak 2: MS
(m/
z): 301.0, 302.9 [M+H]
-, ee: 97.64%. [α]20D=+135.94(
c0.50, CHCl3).
1H NMR (400 MHz, CDCl
3): δ 8.44 (br, 0.65H), 6.80 (br, 0.29H) 5.92-5.67 (m,2H), 4.65-4.55 (m, 1H), 4.13-4.10
(m, 0.70H), 3.84-3.37 (m, 2.74H), 3.18-3.15 (m, 0.70H), 2.38-2.25 (m, 2H), 1.47 (s,
9H).
Synthesis of tert-butyl (R)-3-amino-2,3,6,7-tetrahydro-1H-azepine-1-carboxylate (109b-1):
[0755] To solution of tert-butyl (R)-3-(2,2,2-trichloroacetamido)-2,3,6,7-tetrahydro-1H-azepine-1-carboxylate
(109a-1, 100 mg; 0.28 mmol) in methanol (2 mL) was added sodium hydroxide (1.5N, 1.9 mL).
The resulting mixture was stirred at 40 °C overnight. The mixture was diluted with
water (10 mL), and extracted with methylene chloride. The organic layer was washed
with brine, dried over anhydrous sodium sulfate, filtered, and concentrated to afford
the title compound
(109b-1). MS
(m/
z) 212.91 [M+H]
+.
Synthesis of (7R)-12-(benzyloxy)-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,7,11-tetrahydro-3H-2,7-methanopiyrido[1,2-a][1,4]diazonine-10-carboxamide
(109c-1):
[0756] The title compound was prepared in a method similar to compound
10a in Example 9 using tert-butyl (R)-3-amino-2,3,6,7-tetrahydro-1H-azepine-1-carboxylate
(109b-1) instead of
tert-butyl 3-amino-4-hydroxyazepane-1-carboxylate. MS (
m/
z) 510.47 [M+H]
+.
Synthesis of (7R)-12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,7,11-tetrahydro-3H-2,7-methanopyprido[1,2-a][1,4]diazonine-10-carboxamide
(109-1):
[0757] The title compound was prepared in a manner similar to compound
11 in Example 10 using (7R)-12-(benzyloxy)-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,7,11-tetrahydro-3H-2,7-methanopyrido
[1,2-a][1,4]diazonine-10-carboxamide
(109c-1) in place of 12-(Benzyloxy)-6-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro
-3H-2,7-methanopyrido[1,2-a][1,4] diazonine-10-carboxamide
(10a). MS
(m/
z) 420.16 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.39 (t, J = 5.7 Hz, 1H), 8.57 (s, 1H), 7.28 - 7.15 (m, 2H), 5.85 - 5.73 (m,
1H), 5.64 - 5.54 (m, 1H), 5.34 (s, 1H), 4.57 (d, J = 5.7 Hz, 2H), 4.20 (td, J = 12.2,
6.6 Hz, 1H), 4.08 (dd, J = 14.9, 2.5 Hz, 1H), 3.84 - 3.75 (m, 1H), 3.29 (dd, J = 12.9,
8.4 Hz, 1H), 2.84 (d, J = 9.4 Hz, 1H), 2.29 (ddd, J = 15.7, 9.0, 6.4 Hz, 1H).
Example 106b: Preparation of (7S)-12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(109-2):
[0758]

[0759] The title compound was prepared in a manner similar to
109-1, using tert-butyl (S)-3-(2,2,2-trichloroacetamido)-2,3,6,7-tetrahydro-1H-azepine-1-carboxylate
(109a-2) in place of tert-butyl (R)-3-(2,2,2-trichloroacetamido)-2,3,6,7-tetrahydro-1H-azepine-1-carboxylate
(109a-1). MS
(m/
z) 420.14 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.39 (t, J = 5.8 Hz, 1H), 8.57 (s, 1H), 7.22 (t, J = 8.6 Hz, 2H), 5.85 - 5.74
(m, 1H), 5.64 - 5.54 (m, 1H), 5.34 (s, 1H), 4.57 (d, J = 5.7 Hz, 2H), 4.20 (td, J
= 12.1, 6.5 Hz, 1H), 4.08 (dd, J = 14.9, 2.5 Hz, 1H), 3.84 - 3.75 (m, 1H), 3.29 (dd,
J = 12.9, 8.4 Hz, 1H), 2.90 - 2.80 (m, 1H), 2.29 (ddd, J = 15.7, 9.1, 6.6 Hz, 1H).
Example 107: Preparation of (13S)-10,11-difluoro-4-hydroxy-3,5-dioxo-N-(2,4,6-trifluorobenzyl)-3,5,8,13-tetrahydro-7H-6,13-methanobenzo[g]pyrido[1,2-a][1,4]diazonine-2-carboxamide
and (13R)-10,11-difluoro-4-hydroxy-3,5-dioxo-N-(2,4,6-trifluorobenzyl)-3,5,8,13-tetrahydro-7H-6,13-methanobenzo[g]pyrido[1,2-a][1,4]diazonine-2-carboxamide
(110-1 and 110-2):
[0760]

Synthesis of 7,8-difluoro-3-(methylsulfonyl)-2,3,4,5-tetrahydro-1H-benzo[d]azepin-1-one
(110a):
[0761] The title compound was synthesized in a manner similar to compound
63d, using 2-(3,4-difluorophenyl)ethan-1-amine in place of 2-phenylethan-1-amine, and
methanesulfonyl chloride in place of
p-toluenesulfonyl chloride.
Synthesis of 7,8-difluoro-3-(methylsulfonyl)-2,3,4,5-tetrahydro-1H-benzo[d]azepin-1-amine
(110b):
[0762] To a stirred suspension of 7,8-difluoro-3-(methylsulfonyl)-2,3,4,5-tetrahydro-1H-benzo[d]azepin-1-one
(110a, 0.189 g, 0.687 mmol) in MeOH (7 mL) was added NaOAc (0.225 g, 2.75 mmol) and hydroxylamine
hydrochloride (0.143 g, 2.06 mmol) at room temperature. The mixture was heated to
reflux overnight. The resulting solution was concentrated and saturated NaHCO
3 (aq) and EtOAc were added. The phases were separated and the aqueous phase was extracted
with EtOAc (2×). The combined organic phase was dried over Na
2SO
4, filtered, and concentrated.
[0763] The crude residue was dissolved in MeOH (6 mL) and nickel (II) chloride (0.174 g,
1.34 mmol) was added. The reaction mixture was cooled to -15 °C and NaBH
4 (0.374 g, 9.87 mmol) was added portion-wise over a period of 2 h. The resulting mixture
was warmed to room temperature and stirred overnight. The reaction mixture was quenched
with water and stirred. The solution was concentrated to remove most of the MeOH and
the resulting residue was extracted with DCM (3×). The combined organic phase was
washed with brine, dried over anhydrous Na
2SO
4, filtered, and concentrated to afford the title compound
(110b), which was used in the next step without further purification. MS (
m/
z) 276.97 [M+H]
+.
Synthesis of 7,8-difluoro-2,3,4,5-tetrahydro-1H-benzo[d]azepin-1-amine (110c):
[0764] A solution of 7,8-difluoro-3-(methylsulfonyl)-2,3,4,5-tetrahydro-1H-benzo[d]azepin-1-amine
(110b, 0.157 g, 0.568 mmol) in 33% HBr in AcOH (1.99 mL, 11.4 mmol) was heated to 90 °C
overnight in a sealed tube. After cooling to room temperature the cap was removed
and the suspension was concentrated. The residue was basified with 1 M NaOH and extracted
with DCM (3×). The combined organic phases were dried over Na
2SO
4, filtered, and concentrated to afford the title compound
(110c), which was used without further purification. MS
(m/
z) 198.96 [M+H]
+.
Synthesis of (13S)- and (13R)-10,11-difluoro-4-hydroxy-3,5-dioxo-N-(2,4,6-trifluorobenzyl)-3,5,8,13-tetrahydro-7H-6,13-methanobenzo[g]pyrido[1,2-a][1,4]diazonine-2-carboxamide
(110-1 and 110-2):
[0765] The title compounds were prepared in a similar manner to compounds
63-1 and
63-2, using 7,8-difluoro-2,3,4,5-tetrahydro-1H-benzo[d]azepin-1-amine
(110c) in place of 2,3,4,5-tetrahydro-1H-benzo[d]azepin-1-amine dihydrobromide. Chiral separation
was carried out using preparative SFC (IB, 35% MeOH containing 0.1% diethylamine)
prior to benzyl deprotection.
[0766] 110-1, peak 1: MS
(m/
z) 506.18 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.36 (t, J = 5.7 Hz, 1H), 9.03 (s, 1H), 7.40 (dd, J = 11.9, 8.3 Hz, 1H), 7.34
- 7.11 (m, 3H), 5.93 (s, 1H), 4.60 (d, J = 5.8 Hz, 2H), 4.43 (dd, J = 15.2, 2.8 Hz,
1H), 4.27 (td, J = 12.6, 5.6 Hz, 1H), 3.99 (d, J = 15.3 Hz, 1H), 3.60 - 3.56 (m, 1H),
3.40 - 3.38 (m, 1H), 2.88 (dd, J = 15.4, 5.5 Hz, 1H).
19F NMR (376 MHz, DMSO-d
6) δ -109.23 (ddd, J = 15.6, 9.4, 6.2 Hz), -112.53 (t, J = 7.2 Hz), - 138.95 (ddd,
J = 23.7, 11.8, 8.1 Hz), -140.25 (ddd, J = 21.3, 11.9, 8.3 Hz).
[0767] 110-2, peak 2: MS
(m/
z) 506.17 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.36 (t, J = 5.7 Hz, 1H), 9.03 (s, 1H), 7.40 (dd, J = 11.9, 8.3 Hz, 1H), 7.31
- 7.16 (m, 3H), 5.93 (s, 1H), 4.60 (d, J = 5.7 Hz, 2H), 4.43 (dd, J = 15.4, 2.7 Hz,
1H), 4.27 (td, J = 12.6, 5.5 Hz, 1H), 3.99 (d, J = 15.2 Hz, 1H), 3.56 - 3.50 (m, 1H),
3.40 (dd, J = 12.7, 7.2 Hz, 1H), 2.88 (dd, J = 15.4, 5.4 Hz, 1H).
19F NMR (376 MHz, DMSO-d
6) δ -109.23 (ddd, J = 15.5, 9.3, 6.2 Hz), -112.54 (t, J = 7.5 Hz), -138.96 (ddd, J
= 23.5, 11.8, 8.1 Hz), -140.26 (ddd, J = 23.8, 12.1, 8.4 Hz).
Example 108: Preparation of (13S)-N-(2,4-difluorobenzyl)-10,11-difluoro-4-hydroxy-3,5-dioxo-3,5,8,13-tetrahydro-7H-6,13-methanobenzo[g]pyrido[1,2-a][1,4]diazonine-2-carboxamide
and (13R)-N-(2,4-difluorobenzyl)-10,11-difluoro-4-hydroxy-3,5-dioxo-3,5,8,13-tetrahydro-7H-6,13-methanobenzo[g]pyrido[1,2-a][1,4]diazonine-2-carboxamide
(111-1 and 111-2):
[0768]

[0769] The title compounds were prepared in a manner similar to compounds
110-1 and
110-2, using methyl 3-(benzyloxy)-5-((2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate
in place of methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate.
[0770] 111-1, peak 1: MS
(m/
z) 488.18 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.33 (t, J = 5.9 Hz, 1H), 9.05 (s, 1H), 7.55 - 7.35 (m, 2H), 7.33 - 7.19 (m,
2H), 7.09 (td, J = 8.5, 1.7 Hz, 1H), 5.96 (s, 1H), 4.67 - 4.51 (m, 2H), 4.44 (dd,
J = 15.2, 2.7 Hz, 1H), 4.28 (td, J = 12.5, 5.5 Hz, 1H), 4.01 (d, J = 15.1 Hz, 1H),
3.56 (dt, J = 21.1, 10.3 Hz, 1H), 3.41 (dd, J = 12.6, 7.2 Hz, 1H), 2.89 (dd, J = 15.4,
5.4 Hz, 1H).
19F NMR (376 MHz, DMSO-d
6) δ -112.30 (ddd, J = 15.8, 8.9, 6.9 Hz), -114.93 (q, J = 8.9 Hz), -138.95 (ddd, J
= 23.7, 11.8, 8.0 Hz), -140.25 (ddd, J = 21.4, 11.9, 8.4 Hz).
[0771] 111-2, peak 2: MS
(m/
z) 488.17 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.33 (t, J = 5.9 Hz, 1H), 9.05 (s, 1H), 7.53 - 7.35 (m, 2H), 7.34 - 7.20 (m,
2H), 7.09 (td, J = 8.4, 2.7 Hz, 1H), 5.96 (s, 1H), 4.67 - 4.50 (m, 2H), 4.44 (dd,
J = 15.2, 2.7 Hz, 1H), 4.28 (td, J = 12.5, 5.5 Hz, 1H), 4.01 (d, J = 15.2 Hz, 1H),
3.55 - 3.49 (m, 1H), 3.41 (dd, J = 12.6, 7.2 Hz, 1H), 2.89 (dd, J = 15.4, 5.4 Hz,
1H).
19F NMR (376 MHz, DMSO-d
6) δ -112.30 (p, J = 7.6 Hz), -114.93 (q, J = 8.6 Hz), -138.95 (ddd, J = 23.7, 11.9,
8.2 Hz), -140.25 (ddd, J = 21.2, 11.7, 8.3 Hz).
Example 109: Synthesis of (7S)-5-fluoro-12-hydroxy-7-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(112):
[0772]

Synthesis of benzyl 4-methyl-5-oxo-2-phenyloxazolidine-3-carboxylate (112a):
[0773] ((Benzyloxy)carbonyl)alanine (380 g, 1.69 mol, 1.0 eq) and (dimethoxymethyl)benzene
(386.2 g, 2.54 mol, 1.5 eq) was dissolved in Et
2O (3.8 L) and cooled to -78 °C under Ar (g), and a solution of BF
3-Et
2O (2161 g, 15.22 mol, 9.0 eq) was added dropwise. After the addition completed, the
mixture was allowed to stir at room temperature for 12 h. Then the reaction mixture
was cooled to 0 °C and aq. NaHCO
3 solution (7.6 L) was added dropwise. The reaction mixture was extracted with EtOAc
(2 × 2 L). The combined organic layers were washed with brine, dried over Na
2SO
4, concentrated to give crude product, which was purified by silica gel column (eluted
with Petroleum Ether: Ethyl Acetate = 10:1) to give the title compound
(112a). MS (
m/
z): 334.20 [M+Na]
+.
Synthesis of 2-(((benzyloxy)carbonyl)amino)-2-methylpent-4-enoic acid (112b):
[0774] Benzyl 4-methyl-5-oxo-2-phenyloxazolidine-3-carboxylate
(112a, 491 g, 1.58 mol, 1.0 eq) and allyl bromide (248.0 g, 2.05 mol, 1.3 eq) were dissolved
in THF/HMPA (4:1, 4.9 L), cooled to -78 °C under Ar (g), and a solution of LiHMDS
(1 M, 3154 mL, 2.0 eq) was added dropwise. After addition, the mixture was allowed
to stir at -78 °C for 2 h. H
2O (1.2 L) and LiOH H
2O (132.5 g, 3.16 mol, 2.0 eq) were added, and the mixture was allowed to stir at room
temperature for 12 h. Then aq. NaHCO
3 solution (2.5 L) was added dropwise. The resulting mixture was extracted with MTBE
(3 × 500 mL). The organic extracts were discarded, and the aqueous layer was adjusted
to pH = 2 with 2 N HCl, extracted with MTBE (1 L × 2). The combined organic layers
were washed with brine, dried over Na
2SO
4, and concentrated to give crude product, which was purified by silica gel column
(eluted with Petroleum Ether: Ethyl Acetate = 5:1) to give the title compound
(112b). MS
(m/
z): 264.10 [M+H]
+.
Synthesis of benzyl (2-methyl-1-oxopent-4-en-2-yl)carbamate (112c):
[0775] 2-(((Benzyloxy)carbonyl)amino)-2-methylpent-4-enoic acid
(112b, 213 g, 809.0 mmol, 1.0 eq) was dissolved in DCM (2.1 L) and cooled to 0 °C under
Ar (g), and CDI (144.3 g, 889.8 mmol, 1.1 eq) was added in portions. The mixture was
allowed to stir at 0 °C for 1.5 h then was cooled to -30 °C, and DIBAL-H (3.4 L, 3.4
mol, 4.2 eq) was added dropwise. After addition, the mixture was allowed to stir at
-30 °C for 2 h before being carefully quenched with H
2O (64 mL), 15% aq. NaOH (64 mL) and H
2O (108 mL) dropwise at -30 °C. The cooling bath was removed and mixture was stirred
for 10 min. Na
2SO
4 (1300 g) was added and stirred for 10 mins, filtered, and the filtrate was concentrated
in vacuo. The crude product was purified by silica gel column (eluted with Petroleum
Ether: Ethyl Acetate = 30:1 to 5:1) to give the title compound
(112c). MS (m/z): 248.10 [M+H]
+.
Synthesis of tert-butyl allyl(2-(((benzyloxy)carbonyl)amino)-2-methylpent-4-en-1-yl)carbamate (112d):
[0776] To a solution of benzyl (2-methyl-1-oxopent-4-en-2-yl)carbamate
(112c, 34.7 g, 140 mmol, 1.0 eq) in DCM (700 mL) was added allylamine (136 g, 2.37 mol,
17 eq) and MgSO
4 (67.5 g, 561 mmol, 4.0 eq) under Ar (g). Then the reaction mixture was stirred at
40 °C overnight. The reaction mixture was cooled to room temperature, filtered and
the filtrate was concentrated in vacuo. The resulting residue was dissolved in MeOH
(1.4 L) and AcOH (31.4 g, 168.3 mmol, 1.2 eq) and NaBH
3CN (12.37 g, 196.3 mmol, 1.4 eq) were added. The mixture was allowed to stir at room
temperature for 3 h, then aq. NaHCO
3 solution (1.4 L) was added and extracted with EtOAc (3 × 600 mL). The combined organic
layers were washed with brine, dried over Na
2SO
4, and concentrated in vacuo to give benzyl (1-(allylamino)-2-methylpent-4-en-2-yl)carbamate,
which was used directly to the next step without further purification. MS (m/z): 289.20
[M+H]
+.
[0777] The residue (43 g, 149.3 mmol, 1.0 eq) was dissolved in DCM (900 mL) and Boc
2O (85.3 g, 224 mmol, 1.5 eq) was added at 0 °C, followed by Et
3N (22.6 g, 224 mmol, 1.5 eq) and DMAP (1.82 g, 14.9 mmol, 0.1 eq). After the addition,
the mixture was allowed to stir at room temperature for 3 h. The reaction mixture
was washed with brine (700 mL × 2). The organic layer was dried over Na
2SO
4, concentrated, and purified by silica gel column (eluted with Heptane:Ethyl Acetate
= 50:1) to give the title compound
(112d). MS
(m/
z): 411.20 [M+Na]
+.
Synthesis of tert-butyl (S)- and (R)-3-(((benzyloxy)carbonyl)amino)-3-methyl-2,3,4,7-tetrahydro-1H-azepine-1-carboxylate
(112e-1 and 112e-2):
[0778] To a solution of tert-butyl allyl(2-(((benzyloxy)carbonyl)amino)-2-methylpent-4-en-1-yl)carbamate
(112d, 28 g, 72.2 mmol, 1.0 eq) in DCM (850 mL) was added bis(tricyclohexylphosphine) benzylidine
ruthenium (IV) dichloride (5.33 g, 6.5 mmol, 0.09 eq). The reaction mixture was heated
to 40 °C, and stirred for 3 h. The reaction was concentrated, diluted with DCM and
purified by silica gel column chromatography (eluted with heptane:ethyl acetate =
5:1) to give the title compound as a mixture of enantiomers. MS (m/z): 361.20 [M+H]
+.
[0779] The two enantiomers were separated by chiral SFC using an IG-3 column and eluting
with 0.1% DEA in IPA/CO
2 = 20:80 to give the title compounds
(112e-1 (first eluting compound) and
112e-2 (second eluting compound)). MS (m/z):361.20 [M+H]
+. ee: 96.66%.
Synthesis of tert-butyl (3S)-3-(((benzyloxy)carbonyl)amino)-5-fluoro-3-methylazepane-1-carboxylate (112f):
[0780] The title compound was synthesized in a similar manner to compounds
53d-1 and
53d-2, using tert-butyl (S)-3-(((benzyloxy)carbonyl)amino)-3-methyl-2,3,4,7-tetrahydro-1H-azepine-1-carboxylate
(112e-1) (single enantiomer, stereochemistry arbitrarily assigned) in place of benzyl (S)-3-(((benzyloxy)carbonyl)amino)-2,3,4,7-tetrahydro-1H-azepine-1-carboxylate.
MS (
m/
z):380.7 [M+H]
+ (42e-1).
Synthesis of (7S)-5-fluoro-12-hydroxy-7-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(112):
[0781] The title product was prepared in a similar manner to compound
27, using tert-butyl (3S)-3-(((benzyloxy)carbonyl)amino)-5-fluoro-3-methylazepane-1-carboxylate
(112f) in place of tert-butyl (2-oxo-2,3,4,5-tetrahydro-1H-benzo[b]azepin-3-yl)carbamate
and methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate
in place of methyl 3-(benzyloxy)-5-((2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate.
MS (
m/
z)
: 454.30 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3)
δ 10.38 (s, 1H), 8.52 (s, 1H), 6.86 (dd, J = 9.1, 8.0 Hz, 2H), 4.97 - 4.74 (m, 1H),
4.62 (d, J = 5.7 Hz, 2H), 4.39 (dt, J = 13.6, 6.8 Hz, 1H), 3.84 - 3.61 (m, 2H), 3.26
- 3.15 (m, 1H), 2.48-2.06 (m,, 4H), 1.74 (s, 3H).
Example 110: Preparation of (3S,7S)-5,5-difluoro-12-hydroxy-3-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(113):
[0782]

Synthesis of (3S,7S)-12-(benzyloxy)-5,5-difluoro-3-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide,
(3S,7S)-12-(benzyloxy)-5-fluoro-3-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
and (3S,7S)-12-(benzyloxy)-5-fluoro-3-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(113a-1, 113a-2, and 113a-3):
[0783] DMP (86.4 mg, 0.204 mmol) was added to a solution of (3S,7S)-12-(benzyloxy)-5-hydroxy-3-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(84b, 92 mg, 0.170 mmol) in DCM (2 mL) at rt, and the reaction mixture was stirred for
17 hours. The mixture was concentrated to dryness, diluted with EtOAc (10 mL), and
washed with sat. NaHCO
3 (10 mL) and Na
2S
2O
3 (IN, 10 mL). This two wash process was repeated thrice, and the organic phase was
then washed with water, dried over Na
2SO
4, filtered, and concentrated to give (3S,7S)-12-(benzyloxy)-3-methyl-1,5,11-trioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide,
which was carried forward without further purification. MS (m/z): 540.12 [M+H]
+.
[0784] The product (90 mg, 0.167 mmol) was dissolved in DCM (2 mL) at rt. DeoxoFluor (442
mg, 2 mmol) was added dropwise, and the reaction mixture was stirred for 17 hours.
The reaction mixture was diluted with EtOAc (10 mL), and treated with sat. NaHCO
3 (10 mL). The resulting mixture was stirred at room temperature for 30 min. The organic
phase was separated, concentrated, and the residue purified by silica gel eluted with
0-100% EtOAc /heptane to afford the title products
(113a-1, 113a-2, and
113a-3), olefin regiochemistry assigned arbitrarily.
113a-1: MS (
m/
z): 562.20 [M+H]
+;
113a-2: MS
(m/
z): 542.14 [M+H]
+;
113a-3: MS
(m/
z): 542.14 [M+H]
+.
Synthesis of (3S,7S)-5,5-difluoro-12-hydroxy-3-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(113):
[0785] The title compound was prepared in a similar manner to compound
28, using (3S,7S)-12-(benzyloxy)-5,5-difluoro-3-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(113a-1) in place of (7S)-12-(benzyloxy)-N-(2,4-difluorobenzyl)-1,11-dioxo-1,3,4,6,7,11-hexahydro-2,
7-methanopyrido[1,2-d][1,4,7]oxadiazonine-10-carboxamide
(28a). MS
(m/
z): 472.20 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.95-10.58 (br, 1H), (10.36 (t, J = 5.8 Hz, 1H), 8.56 (s, 1H), 7.21 (t, J = 8.7
Hz, 2H), 4.88 (d, J = 5.0 Hz, 1H), 4.54 (dt, J = 24.1, 8.0 Hz, 3H), 3.99 (dd, J =
15.0, 1.6 Hz, 1H), 3.81 (dd, J = 15.0, 2.8 Hz, 1H), 2.72 - 2.35 (m, 4H), 1.20 (d,
J = 6.7 Hz, 3H).
Example 111: Preparation of (7S)-5,5-difluoro-12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a[[1,4[diazonine-10-carboxamide
(114):
[0786]

[0787] The title compound was prepared in a similar manner to
113, using (7S)-12-(benzyloxy)-1,5,11-trioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(103a) in place of (3S,7S)-12-(benzyloxy)-3-methyl-1,5,11-trioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(113a-1). MS (
m/
z): 458.22 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3)
δ 10.32 (s, 1H), 8.43 (s, 1H), 6.86 (t, J = 8.5 Hz, 2H), 4.78 - 4.49 (m, 3H), 4.31
(dt, J = 14.7, 7.9 Hz, 1H), 3.98 (d, J = 14.8 Hz, 1H), 3.78 (d, J = 14.8 Hz, 1H),
3.23 (dd, J = 13.6, 6.5 Hz, 1H), 2.70-2.00 (m, 4H).
Example 112a: Preparation of (5S,7S)-5-fluoro-12-hydroxy-5-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(115-1):
[0788]

Synthesis of (5S,7S)-12-(benzyloxy)-5-fluoro-5-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide,
(7S)-12-(benzyloxy)-5-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,6,7,11-tetrahydro-3H-2,7-methanopyprido[1,2-a][1,4]diazonine-10-carboxamide
and (7S)-12-(benzyloxy)-5-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(115a-1, 115a-2, and 115a-3):
[0789] Deoxo-Fluor (0.022 mL, 2 eq.) was added to a solution of (5R,7S)-12-(benzyloxy)-5-hydroxy-5-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(107a-2, 32 mg, 0.006 mmol) in DCM (1 mL) at 0 °C, and stirred for 90 min. The reaction was
quenched with water, diluted with EtOAc, and washed with sat. NaHCO
3 solution. The organic layer was concentrated, and purified via preparative HPLC,
eluting with 10-60% acetonitrile in water (0.1% TFA) to give the title compounds
(115a-1, 115a-2, and
115a-3). 115a-1: MS
(m/
z) 544.18 [M+H]
+; 115a-2: MS (
m/
z) 524.15 [M+H]
+; 115a-3: MS
(m/
z) 524.15 [M+H]
+.
Synthesis of (5S,7S)-5-fluoro-12-hydroxy-5-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1.4.5.6.7.11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(115-1):
[0790] TFA (0.5 mL) was added to a solution of (5S,7S)-12-(benzyloxy)-5-fluoro-5-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(115a-1, 3 mg) in toluene (0.5 mL) at rt, and stirred for one hour. The reaction mixture was
concentrated down, and purified by preparative HPLC, eluting with 10-60% acetonitrile
(0.1% TFA) in water (0.1% TFA) to afford the title compound
(115-1). MS
(m/
z) 454.22 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) δ 10.31 (s, 1H), 8.39 (s, 1H), 6.96 - 6.80 (m, 2H), 4.62 (d, J = 5.5 Hz, 2H), 4.36
- 4.22 (m, 1H), 3.91 (m, 2H), 3.17 (ddd, J = 13.9, 11.5, 4.4 Hz, 1H), 2.97 - 2.78
(m, 1H), 2.23 - 2.00 (m, 1H), 2.00 - 1.90 (m, 2H), 1.83 (ddd, J = 37.1, 16.5, 4.0
Hz, 1H), 1.40 (d, J = 22.5 Hz, 3H).
Example 112b: Preparation of (5R,7S)-5-fluoro-12-hydroxy-5-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(115-2):
[0791]

[0792] The title compound was prepared in a manner similar to compound
115-1, using (5S,7S)-12-(benzyloxy)-5-hydroxy-5-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(107a-1) instead of (5R,7S)-12-(benzyloxy)-5-hydroxy-5-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(107a-2). MS (
m/
z) 454.22 [M+H]
+_
1H NMR (400 MHz, Acetonitrile-d
3) δ 8.38 (d, J = 5.0 Hz, 1H), 6.87 (t, J = 8.5 Hz, 1H), 6.68 (t, J = 8.5 Hz, 1H),
4.93 - 4.73 (m, 1H), 4.62 (d, J = 5.7 Hz, 1H), 4.53 - 4.12 (m, 2H), 3.90 (m, 1H),
3.21 - 3.06 (m, 1H), 2.91 (m, 1H), 2.11 (m, 4H), 1.41 (dd, J = 22.4, 6.7 Hz, 3H).
Example 113: Preparation of (7S)-12-hydroxy-5-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
and (7S)-12-hydroxy-5-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(116-1 and 116-2):
[0793]

[0794] The title compounds were prepared in a manner similar to
115-1, using (7S)-12-(benzyloxy)-5-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
or (7S)-12-(benzyloxy)-5-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(115a-2 or
115a-3) in place of (5S,7S)-12-(benzyloxy)-5-fluoro-5-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(115a-1).
[0795] 116-1: MS
(m/
z) 434.21 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) δ 8.38 (s, 1H), 6.97 - 6.82 (m, 2H), 5.39 (s, 1H), 4.97 - 4.66 (m, 2H), 4.62 (d,
J = 5.6 Hz, 1H), 3.89 - 3.53 (m, 3H), 2.79 (dd, J = 17.3, 8.8 Hz, 3H), 1.77 (s, 3H).
[0796] 116-2: MS
(m/
z) 434.21 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) δ 10.35 (s, 1H), 8.42 (s, 1H), 7.03 - 6.76 (m, 2H), 5.38 (s, 1H), 5.00 (s, 1H),
4.62 (d, J = 5.5 Hz, 2H), 4.30 (td, J = 12.7, 6.2 Hz, 1H), 4.05 (dd, J = 15.1, 2.3
Hz, 1H), 3.76 (d, J = 14.8 Hz, 1H), 3.37 (dd, J = 13.1, 8.1 Hz, 1H), 3.00 (q, J =
12.3, 11.1 Hz, 1H), 2.16 (dd, J = 15.8, 6.0 Hz, 1H), 1.81 (s, 3H).
Example 114: Preparation of (7R)-N-(3-chloro-2,4-difluorobenzyl)-6,6-difluoro-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
and (7S)-N-(3-chloro-2,4-difluorobenzyl)-6,6-difluoro-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(117-1 and 117-2):
[0797]

Synthesis of 12-(benzyloxy)-N-(3-chloro-2,4-difluorobenzyl)-6-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(117a):
[0798] The title compound was prepared in a manner similar to compound
28a using 3-aminoazepan-4-ol; dihydrobromide in place of 1,4-oxazepan-6-amine and ethyl
3-benzyloxy-5-[(3-chloro-2,4-difluoro-phenyl)methylcarbamoyl]-4-oxo-pyran-2-carboxylate
in place of methyl 3-(benzyloxy)-5-((2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate.
MS
(m/
z): 544.28 [M+H]
+.
Synthesis of 12-(benzyloxy)-N-(3-chloro-2,4-difluorobenzyl)-6,6-difluoro-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
and 12-(benzyloxy)-N-(3-chloro-2,4-difluorobenzyl)-6-fluoro-1,11-dioxo-1,4,7,11-tetrahydro-3H-2,7-methanopyprido[1,2-a][1,4]diazonine-10-carboxamide
(117b-1 and 117b-2):
[0799] The title compounds were prepared in a manner similar to compounds
113a-1, 113a-2, and
113a-3 using 12-(benzyloxy)-N-(3-chloro-2,4-difluorobenzyl)-6-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(117a) in place of (5R,7S)-12-(benzyloxy)-5-hydroxy-5-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(107a-2). 117b-1: MS (m/z) 564.29 [M+H]
+;
117b-2: MS (m/z) 544.31 [M+H]
+.
Synthesis of (7R)-N-(3-chloro-2,4-difluorobenzyl)-6,6-difluoro-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
and (7S)-N-(3-chloro-2,4-difluorobenzyl)-6,6-difluoro-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(117-1 and 117-2):
[0800] 12-(benzyloxy)-N-(3-chloro-2,4-difluorobenzyl)-6,6-difluoro-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(71c, 145 mg) was separated into its individual enantiomers by preparative SFC chromatography
on an IB column using MeOH cosolvent. The separated enantiomers were dissolved in
3 mL of Toluene and 3 mL of TFA and stirred at room temperature for 1 h. After concentration,
purification by RP-HPLC eluting with ACN/water (0.1% TFA) provided the title compounds
(117-1 and
117-2), stereochemistry drawn arbitrarily.
[0801] 117-1 (peak 1): MS
(m/
z) 474.18 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.67 (s, 1H), 10.28 (t, J = 6.0 Hz, 1H), 8.50 (s, 1H), 7.40 (q, J = 7.8 Hz, 1H),
7.30 (t, J = 8.9 Hz, 1H), 5.24 (t, J = 7.2 Hz, 1H), 4.61 (d, J = 5.9 Hz, 2H), 4.27
- 4.15 (m, 1H), 4.03 (dd, J = 16.4, 4.1 Hz, 1H), 3.88 (d, J = 15.5 Hz, 1H), 3.19 (dd,
J = 13.7, 6.7 Hz, 1H), 2.22 (s, 1H), 1.95 (dd, J = 18.6, 12.1 Hz, 2H), 1.69 - 1.54
(m, 1H).
[0802] 117-2 (peak 2): MS
(m/
z) 474.16 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.28 (t, J = 6.0 Hz, 1H), 8.50 (s, 1H), 7.40 (td, J = 8.5, 6.3 Hz, 1H), 7.30
(td, J = 8.8, 1.7 Hz, 1H), 5.25 (d, J = 7.6 Hz, 1H), 4.61 (d, J = 6.0 Hz, 2H), 4.27
- 4.15 (m, 1H), 4.04 (dd, J = 15.6, 4.1 Hz, 1H), 3.88 (dd, J = 15.5, 2.0 Hz, 1H),
3.19 (dd, J = 13.5, 6.5 Hz, 1H), 2.23 (d, J = 12.2 Hz, 1H), 1.96 (d, J = 20.5 Hz,
2H), 1.61 (dt, J = 28.6, 14.3 Hz, 1H).
Example 115: Preparation of (3S,7S)-5-fluoro-12-hydroxy-3-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
and (3S,7S)-5-fluoro-12-hydroxy-3-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(118-1 and 118-2):
[0803]

[0804] The title compounds were prepared in a similar manner to compound
113, using (3S,7S)-12-(benzyloxy)-5-fluoro-3-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
or (3S,7S)-12-(benzyloxy)-5-fluoro-3-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(113a-2 or
113a-3) in place of (3S,7S)-12-(benzyloxy)-5,5-difluoro-3-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(113a-1).
[0805] 118-1: MS
(m/
z): 452.20 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3)
δ 10.31 (s, 1H), 8.41 (s, 1H), 6.86 (t, J = 8.5 Hz, 2H), 5.33 (dt, J = 24.1, 2.5 Hz,
1H), 5.33-5.24 (m, 1H), 4.86 (d, J = 9.6 Hz, 1H), 4.61 (d, J = 5.2 Hz, 2H), 3.90 (d,
J = 14.3 Hz, 1H), 3.70 (d, J = 14.4 Hz, 1H), 3.12 (td, J = 18.8, 9.1 Hz, 1H), 2.79
(d, J = 18.7 Hz, 1H), 1.33 (d, J = 6.9 Hz, 3H).
[0806] 118-2: MS (m/z): 452.20 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3)
δ 10.30 (s, 1H), 8.43 (s, 1H), 6.86 (t, J = 8.5 Hz, 2H), 5.41 (d, J = 21.1 Hz, 1H),
5.06 (s, 1H), 4.80 (dt, J = 12.2, 6.5 Hz, 1H), 4.61 (d, J = 5.5 Hz, 2H), 3.92 (d,
J = 15.1 Hz, 1H), 3.74 (d, J = 15.1 Hz, 1H), 2.93 (d, J = 12.0 Hz, 1H), 2.66 - 2.55
(m, 1H), 1.28 (dd, J = 6.6, 1.0 Hz, 3H).
Example 116: Preparation of (7S)-7-ethyl-12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
and (7R)-7-ethyl-12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(119-1 and 119-2):
[0807]

[0808] The title compounds were prepared similarly to compounds
59-1 and
59-2, using EtMgBr in place of MeMgBr.
[0809] 119-1: MS (m/z) 432.1 [M+H]
+.
1H NMR (400 MHz, Methanol-d
4) δ 8.50 (s, 1H), 6.93 (m, 2H), 4.69 (s, 2H), 4.39 (m, 1H), 4.12 (m,1H), 3.91 (m,
1H), 3.17 (m, 1H), 2.31 (m, 1H), 2.12 (m, 2H), 1.87 (m, 3H), 1.55 (m, 1H), 0.98 (m,
3H).
[0810] 119-2: MS
(m/
z) 432.1 [M+H]
+.
1H NMR (400 MHz, Methanol-d
4) δ 8.50 (s, 1H), 6.91 (m, 2H), 4.69 (s, 2H), 4.39 (m, 1H), 3.91 (m, 1H), 3.72 (m,
2H), 3.17 (m, 1H), 2.31 (m, 1H), 2.12 (m, 2H), 1.91 (m, 2H), 1.78 (m, 1H), 1.55 (m,
1H), 0.98 (m, 3H).
Example 117: Preparation of (13S)-10,11-difluoro-4-hydroxy-13-methyl-3,5-dioxo-N-(2,4,6-trifluorobenzyl)-3,5,8,13-tetrahydro-7H-6,13-methanobenzo[g]pyrido[1,2-a][1,4]diazonine-2-carboxamide
and (13R)-10,11-difluoro-4-hydroxy-13-methyl-3,5-dioxo-N-(2,4,6-trifluorobenzyl)-3,5,8,13-tetrahydro-7H-6,13-methanobenzo[g]pyrido[1,2-a][1,4]diazonine-2-carboxamide
(120-1 and 120-2):
[0811]

Synthesis of 7,8-difluoro-1-methyl-3-(methylsulfonyl)-2,3,4,5-tetrahydro-1H-benzo[d]azepin-1-ol
(120a):
[0812] To a solution of 7,8-difluoro-3-(methylsulfonyl)-2,3,4,5-tetrahydro-1H-benzo[d]azepin-1-one
(110a, 0.102 g, 0.371 mmol) in Et
2O (1 mL) and THF (2 mL) at -78 °C was added a 3 M solution of MeMgBr in THF (0.25
mL, 0.741 mmol). The reaction mixture was stirred for 30 min then warmed to rt. The
reaction was quenched with brine and extracted with EtOAc. The organic phase was dried
over Na
2SO
4, filtered, concentrated, and purified by column chromatography (0-100% EtOAc/heptane)
to afford the title compound
(120a). MS
(m/
z) 291.96 [M+H]
+.
Synthesis of 7,8-difluoro-1-methyl-3-(methylsulfonyl)-2,3,4,5-tetrahydro-1H-benzo[d]azepin-1-amine
(120b):
[0813] To a solution of 7,8-difluoro-1-methyl-3-(methylsulfonyl)-2,3,4,5-tetrahydro-1H-benzo[d]azepin-1-ol
(120a, 0.11 g, 0.38 mmol) and azidotrimethylsilane (0.13 mL, 0.953 mmol) in CHCl
3 (5 mL) at 0 °C, was added boron trifluoride diethyl etherate (0.24 mL, 1.91 mmol).
The reaction mixture was allowed to warm to rt, and stirred overnight. The reaction
mixture was concentrated, and purified by column chromatography (0-100% EtOAc/heptane)
to afford 1-azido-7,8-difluoro-1-methyl-3-(methylsulfonyl)-2,3,4,5-tetrahydro-1H-benzo[d]azepine.
MS
(m/
z) 315.88 [M+H]
+.
[0814] To a solution of 1-azido-7,8-difluoro-1-methyl-3-(methylsulfonyl)-2,3,4,5-tetrahydro-1H-benzo[d]azepine
(0.084 g, 0.266 mmol) in EtOH (5 mL) was added 10% Pd/C (0.056 g, 0.053 mmol). A hydrogen
balloon was introduced and hydrogen gas was bubbled into the reaction mixture for
5 min. The outlet needle was removed and the reaction mixture left to stir under hydrogen
atmosphere. After 3 h, the reaction mixture was filtered through Celite and concentrated
to afford the title compound
(120b), which was carried forward without further purification. MS
(m/
z) 290.91 [M+H]
+.
Synthesis of (13S)- and (13R)-10,11-difluoro-4-hydroxy-13-methyl-3.5-dioxo-N-(2.4.6-trifluorobenzyl)-3,5,8,13-tetrahydro-7H-6,13-methanobenzo[g]pyrido[1,2-a][1,4]diazonine-2-carboxamide
(120-1 and 120-2):
[0815] The title compounds were prepared in a similar manner to compounds
110-1 and
110-2 using 7,8-difluoro-1-methyl-3-(methylsulfonyl)-2,3,4,5-tetrahydro-1H-benzo[d]azepin-1-amine
(120b) in place of 7,8-difluoro-3-(methylsulfonyl)-2,3,4,5-tetrahydro-1H-benzo[d]azepin-1-amine
(110b). Chiral separation was carried out using preparative SFC (IB, 35% MeOH), prior to
deprotection.
[0816] 120-1, peak 1: MS
(m/
z) 520.20 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.39 (t, J = 5.8 Hz, 1H), 8.74 (s, 1H), 7.37 (dd, J = 11.7, 8.3 Hz, 1H), 7.31
(dd, J = 12.2, 8.0 Hz, 1H), 7.26 - 7.14 (m, 2H), 4.60 (d, J = 5.8 Hz, 2H), 4.28 (d,
J = 15.3 Hz, 1H), 4.21 (td, J = 12.6, 5.4 Hz, 1H), 3.92 (d, J = 15.4 Hz, 1H), 3.61
(td, J = 14.4, 13.2, 7.0 Hz, 1H), 3.40 (dd, J = 12.6, 7.0 Hz, 1H), 2.87 (dd, J = 15.3,
5.3 Hz, 1H), 1.98 (s, 3H).
19F NMR (376 MHz, DMSO-d
6) δ - 109.35 (ddd, J = 15.5, 9.4, 6.2 Hz), -112.52 (t, J = 7.3 Hz), -139.13 (ddd,
J = 23.7, 11.7, 8.0 Hz), -139.67 (ddd, J = 21.6, 12.1, 8.2 Hz).
[0817] 120-2, peak 2: MS
(m/
z) 520.17 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.39 (t, J = 5.8 Hz, 1H), 8.74 (s, 1H), 7.37 (dd, J = 11.7, 8.3 Hz, 1H), 7.31
(dd, J = 12.3, 8.1 Hz, 1H), 7.26 - 7.17 (m, 2H), 4.60 (d, J = 5.7 Hz, 2H), 4.28 (d,
J = 15.3 Hz, 1H), 4.21 (td, J = 12.6, 5.3 Hz, 1H), 3.92 (d, J = 15.4 Hz, 1H), 3.61
(td, J = 14.0, 7.2 Hz, 1H), 3.40 (dd, J = 12.7, 7.0 Hz, 1H), 2.87 (dd, J = 15.2, 5.2
Hz, 1H), 1.98 (s, 3H).
19F NMR (376 MHz, DMSO-d
6) δ -109.35 (tt, J = 9.4, 6.3 Hz), -112.52 (t, J = 7.2 Hz), -139.13 (ddd, J = 23.5,
11.6, 7.9 Hz), -139.67 (ddd, J = 23.7, 12.1, 8.3 Hz).
Example 118: Preparation of (7S)-5-fluoro-12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(121):
[0818]

[0819] (7S)-12-(benzyloxy)-5-fluoro-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(121a) was prepared in a similar manner to
113a-2, using (7S)-12-(benzyloxy)-1,5,11-trioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(103a) in place of (3S,7S)-12-(benzyloxy)-5-hydroxy-3-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(84b).
[0820] The title compound
(121) was prepared in a similar manner to compound
113, using (7S)-12-(benzyloxy)-5-fluoro-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(121a) in place of (3S,7S)-12-(benzyloxy)-5,5-difluoro-3-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(113a-1). MS (
m/
z): 438.20 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3)
δ 10.30 (s, 1H), 8.42 (s, 1H), 6.86 (t, J = 8.5 Hz, 2H), 5.44 (d, J = 24.6 Hz, 1H),
4.88-4.77 (m, 1H), 4.72-4.55 (m, 2H), 4.36-4.24(m, 1H), 3.97 (d, J = 14.4 Hz, 1H),
3.76 (d, J = 14.3 Hz, 1H), 3.65 (d, J = 17.3 Hz, 1H), 3.35 - 3.13 (m, 1H), 2.83 -
2.73 (m, 1H).
Example 119: Preparation of (13S)-11-bromo-4-hydroxy-3,5-dioxo-N-(2,4,6-trifluorobenzyl)-3,5,8,13-tetrahydro-7H-6,13-methanobenzo[g]pyrido[1,2-a][1,4]diazonine-2-carboxamide
and (13R)-11-bromo-4-hydroxy-3,5-dioxo-N-(2,4,6-trifluorobenzyl)-3,5,8,13-tetrahydro-7H-6,13-methanobenzo[g]pyrido[1,2-a][1,4]diazonine-2-carboxamide (122-1 and 122-2):
[0821]

Synthesis of 8-bromo-3-(methylsulfonyl)-2,3,4,5-tetrahydro-1H-benzo[d]azepin-1-one
(122a):
[0822] The title compound was synthesized in a manner similar to compound 110a, using 2-(4-bromophenyl)ethan-1-amine
in place of 2-(3,4-difluorophenyl)ethan-1-amine. MS (m/z) 318.2 [M+H]
+.
Synthesis of 8-bromo-3-(methylsulfonyl)-2,3,4,5-tetrahydro-1H-benzo[d]azepin-1-yl
methanesulfonate (122b):
[0823] To a stirred suspension of 8-bromo-3-(methylsulfonyl)-2,3,4,5-tetrahydro-1H-benzo[d]azepin-1-one
(122a, 14.0 g, 44.0 mmol) in MeOH (50 mL) was added NaBH
4 (3.3 g, 88.0 mmol) and heated at 80 °C for 1 h. The mixture was cooled to rt, quenched
with water (200 mL) and extracted with EtOAc (200 mL x 3). The combined organic layers
were washed with brine, dried over Na
2SO
4, filtered and concentrated. The residue was purified by column chromatography (1:1
petroleum ether/EtOAc) to give 8-bromo-3-(methylsulfonyl)-2,3,4,5-tetrahydro-1H-benzo[d]azepin-1-ol.
MS (
m/
z) 302.0 [M+H-H
2O]
+.
[0824] To a stirred suspension of 8-bromo-3-(methylsulfonyl)-2,3,4,5-tetrahydro-1H-benzo[d]azepin-1-ol
(13.0 g, 40.6 mmol) in DCM (100 mL), was added Et
3N (12.3 g, 122 mmol) and methanesulfonyl chloride (9.3 g, 81.2 mmol) at rt. The reaction
mixture was stirred at room temperature for 1 h. The mixture was washed with brine
(100 mL x 5), dried over Na
2SO
4, filtered and concentrated to give the title compound
(122b), which was used in the next step without further purification. MS (
m/
z) 302.0 [M+H-MsOH]
+.
Synthesis of 8-bromo-3-(methylsulfonyl)-2,3,4,5-tetrahydro-1H-benzo[d]azepin-1-amine
(122c):
[0825] To a stirred suspension of 8-bromo-3-(methylsulfonyl)-2,3,4,5-tetrahydro-1H-benzo[d]azepin-1-yl
methanesulfonate
(122b, 17.0 g, 42.7 mmol) in DMF (50 mL) was added NaN
3 (5.3 g, 81.2 mmol) at rt. The resulting mixture was stirred at 80 °C overnight. The
mixture was diluted with EtOAc (200 mL), washed with brine (200 mL x 3), dried over
Na
2SO
4, filtered, and concentrated to afford 1-azido-8-bromo-3-(methylsulfonyl)-2,3,4,5-tetrahydro-1H-benzo[d]azepine,
which was used in the next step without further purification. MS
(m/
z) 317.2 [M+H-N
2]
+.
[0826] To a stirred suspension of 1-azido-8-bromo-3-(methylsulfonyl)-2,3,4,5-tetrahydro-1H-benzo[d]azepine
(17.0 g, 49.2 mmol) in THF (50 mL)/H
2O (10 mL) was added PPh
3 (21.3 g, 81.2 mmol) at rt. The mixture was stirred at 60 °C overnight. The mixture
was concentrated to dryness, and the residue purified by column chromatography (100%
EtOAc, then 10:1 DCM/MeOH) to afford the title compound
(122c). MS
(m/
z) 319.0 [M+H]
+.
Synthesis of 8-bromo-2,3,4,5-tetrahvdro-1H-benzo[d]azepin-1-amine dihydrochloride
(122d):
[0827] A mixture of 8-bromo-3-(methylsulfonyl)-2,3,4,5-tetrahydro-1H-benzo[d]azepin-1-amine
(122c, 8.0 g, 25.1 mmol) in 33 wt% HBr/AcOH (50 mL) was stirred at 75 °C for 48 h. The mixture
was concentrated to dryness, and the residue basified with 7 M NH
3/MeOH to pH >7. The mixture was filtered and washed with MeOH (200 mL). The filtrate
was concentrated and dissolved in DCM (100 mL). Et
3N (23.7 g, 235 mmol) and Boc
2O (30.6 g, 141 mmol) were added and the reaction mixture was stirred at room temperature
for 1 h. The mixture was washed with 1 N HCl (100 mL) and brine (100 mL). The organic
layer was dried over Na
2SO
4, filtered, and concentrated. The residue was purified by silica gel column (10:1
petroleum ether/EtOAc) to give tert-butyl 8-bromo-1-((tert-butoxycarbonyl)amino)-1,2,4,5-tetrahydro-3H-benzo[d]azepine-3-carboxylate.
MS
(m/
z) 441.2 [M+H]
+.
[0828] A mixture of tert-butyl 8-bromo-1-((tert-butoxycarbonyl)amino)-1,2,4,5-tetrahydro-3H-benzo[d]azepine-3-carboxylate
(12.0 g, 27.2 mmol), 4 M HCl in MeOH (50 mL, 200 mmol) and MeOH (100 mL) was stirred
at room temperature for 4 h. The mixture was concentrated to remove solvent and EtOAc
(200 mL) was added. The solid was filtered and dried to afford the title compound,
which was carried forward without further purification. MS
(m/
z) 241.2 [M+H]
+.
Synthesis of (13S)- and (13R)-11-bromo-4-hydroxy-3,5-dioxo-N-(2,4,6-trifluorobenzyl)-3,5,8,13-tetrahydro-7H-6,13-methanobenzo[g]pyrido[1.2-a][1,4]diazonine-2-carboxamide
(122-1 and 122-2):
[0829] The title compounds were prepared in a similar manner to compounds
63-1 and
63-2, using 8-bromo-2,3,4,5-tetrahydro-1H-benzo[d]azepin-1-amine;dihydrochloride
(122d) in place of 2,3,4,5-tetrahydro-1H-benzo[d]azepin-1-amine dihydrobromide
(63f). Chiral separation was carried using SFC (IB, 45% MeOH containing 0.1% diethylamine),
prior to deprotection.
[0830] 122-1, peak 1: MS
(m/
z) 548.09 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.37 (t, J = 5.7 Hz, 1H), 9.07 (s, 1H), 7.47 (dd, J = 8.2, 2.2 Hz, 1H), 7.39
(d, J = 2.1 Hz, 1H), 7.29 - 7.15 (m, 3H), 5.98 (s, 1H), 4.61 (qd, J = 14.5, 5.7 Hz,
2H), 4.43 (dd, J = 15.2, 2.7 Hz, 1H), 4.28 (td, J = 12.6, 5.6 Hz, 1H), 3.99 (d, J
= 15.2 Hz, 1H), 3.58 - 3.56 (m, 1H), 3.41 (dd, J = 12.8, 7.3 Hz, 1H), 2.86 (dd, J
= 15.4, 5.4 Hz, 1H).
19F NMR (376 MHz, DMSO-d
6) δ -109.23 (ddd, J = 15.1, 9.4, 6.2 Hz), -112.53 (t, J = 7.4 Hz).
[0831] 122-2, peak 2: MS
(m/
z) 548.09 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.37 (t, J = 5.7 Hz, 1H), 9.07 (s, 1H), 7.47 (dd, J = 8.2, 2.2 Hz, 1H), 7.39
(d, J = 2.1 Hz, 1H), 7.31 - 7.12 (m, 3H), 5.98 (s, 1H), 4.61 (qd, J = 14.5, 5.7 Hz,
2H), 4.43 (dd, J = 15.2, 2.7 Hz, 1H), 4.28 (td, J = 12.5, 5.5 Hz, 1H), 3.99 (d, J
= 15.1 Hz, 1H), 3.59 - 3.57 (m, 1H), 3.44 - 3.38 (m, 1H), 2.86 (dd, J = 15.3, 5.4
Hz, 1H).
19F NMR (376 MHz, DMSO-d
6) δ -109.23 (tt, J = 9.4, 6.4 Hz), - 112.53 (t, J = 7.5 Hz).
Example 120: Preparation of (7R)-N-(3-chloro-2,4-difluorobenzyl)-6-fluoro-12-hydroxy-1,11-dioxo-1,4,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
and (7S)-N-(3-chloro-2,4-difluorobenzyl)-6-fluoro-12-hydroxy-1,11-dioxo-1,4,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(123-1 and 123-2):
[0832]

[0833] 12-(benzyloxy)-N-(3-chloro-2,4-difluorobenzyl)-6-fluoro-1,11-dioxo-1,4,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(117b-2, 35 mg) was separated into its individual enantiomers by preparative SFC chromatography
on an IB column using methanol as co-solvent. The separated enantiomers were individually
dissolved in 1 mL of toluene and 1 mL of TFA and stirred at room temperature for 1
h. After concentration, purification of each by RP-HPLC eluting with ACN/water (0.1%
TFA) provided the title compounds.
[0834] 123-1, from peak 1: MS
(m/
z) 454.11 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.32 (t, J = 6.0 Hz, 1H), 8.51 (s, 1H), 7.41 (td, J = 8.5, 6.2 Hz, 1H), 7.30
(td, J = 8.8, 1.7 Hz, 1H), 5.63 (s, 1H), 5.69 - 5.55 (m, 1H), 4.61 (d, J = 6.0 Hz,
2H), 4.22 (td, J = 12.2, 6.7 Hz, 1H), 4.11 (d, J = 14.9 Hz, 1H), 3.93 (dd, J = 15.0,
8.4 Hz, 1H), 3.38 - 3.21 (m, 1H), 2.88 - 2.80 (m, 1H), 2.23 (ddd, J = 16.3, 10.0,
6.7 Hz, 1H).
[0835] 123-2, from peak 2: MS
(m/
z) 454.11 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.32 (t, J = 6.0 Hz, 1H), 8.51 (s, 1H), 7.41 (td, J = 8.5, 6.3 Hz, 1H), 7.30
(td, J = 8.8, 1.7 Hz, 1H), 5.63 (s, 1H), 5.69 - 5.55 (m, 1H), 4.61 (d, J = 6.1 Hz,
2H), 4.22 (td, J = 12.2, 6.7 Hz, 1H), 4.11 (d, J = 14.9 Hz, 1H), 3.93 (dd, J = 15.0,
8.4 Hz, 1H), 3.33 (dd, J = 13.1, 8.2 Hz, 1H), 2.94 - 2.76 (m, 0H), 2.23 (ddd, J =
16.2, 9.8, 6.5 Hz, 1H).
Example 121: Preparation of (7S)-12-hydroxy-5-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(124):
[0836]

Synthesis of (7S)-12-(benzyloxy)-5-methylene-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(124a):
[0837] Tebbe's reagent (0.5 M in toluene, 1.9 mL) was added to a solution of (7S)-12-(benzyloxy)-1,5,11-trioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(103a, 166 mg, 0.316 mmol) in THF (4 mL), at 0 °C, and stirred for 2 hours. The reaction
was quenched with water, diluted with EtOAc, and washed with sat. NaHCO
3 solution. The organic layer was concentrated, and purified by silica gel chromatography
to give the title compound
(124a). MS (
m/
z) 524.21 [M+H]
+.
Synthesis of (7S)-12-hydroxy-5-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide (124):
[0838] 10% Pd/C (10 mg) was added to a solution of (7S)-12-(benzyloxy)-5-methylene-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(22 mg) in EtOH (5 mL) and EtOAc (5 mL). A H
2 balloon was affixed to the reaction, and the reaction was stirred at rt for 2 hours,
before being filtered through celite. The filtrate was concentrated and purified via
preparative HPLC, eluting with 10-60% acetonitrile (0.1% TFA) in water (0.1% TFA)
to afford the title compound
(124). MS (m/z) 436.24 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) δ 10.37 (s, 1H), 8.37 (s, 1H), 6.87 (t, J = 8.5 Hz, 2H), 4.73 - 4.47 (m, 2H), 4.35
(dd, J = 13.8, 6.0 Hz, 1H), 3.85 (d, J = 14.6 Hz, 1H), 3.67 (d, J = 14.4 Hz, 1H),
3.11 - 2.91 (m, 1H), 2.45 (dd, J = 15.6, 9.1 Hz, 1H), 2.11 - 1.95 (m, 1H), 1.77 (m,
2H), 1.58 - 1.37 (m, 1H), 1.26 (t, J = 14.6 Hz, 1H), 0.94 (dd, J = 11.3, 6.6 Hz, 3H).
Example 122: (7S)-12-hydroxy-1,11-dioxo-N-(2,3,4,6-tetrafluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(125):
[0839]

[0840] The title compound was prepared in a similar manner to compound
51, using (2,3,4,6-tetrafluorophenyl)methanamine in place of (3-chloro-2,4-difluorophenyl)methanamine.
MS
(m/
z) 440.2 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.48 (t,
J= 5.9 Hz, 1H), 8.48 (s, 1H), 7.76 - 7.42 (m, 1H), 4.75 (dd,
J= 6.0, 2.9 Hz, 1H), 4.60 (d,
J= 5.9 Hz, 2H), 4.13 (dt,
J = 13.1, 7.8 Hz, 1H), 3.97 - 3.81 (m, 1H), 3.67 (dd,
J= 14.7, 1.9 Hz, 1H), 3.07 (ddd,
J= 13.2, 6.8, 3.6 Hz, 1H), 2.16 - 1.47 (m, 5H), 1.14 (q,
J = 11.9 Hz, 1H).
Example 123: (7S)-N-(3-chloro-2-fluorobenzyl)-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(126):
[0841]

[0842] The title compound was prepared in a similar manner to compound
51, using (3-chloro-2-fluorophenyl)methanamine in place of (3-chloro-2,4-difluorophenyl)methanamine.
MS
(m/
z) 418.85 [M]
-.
1H NMR (400 MHz, DMSO-
d6) δ 10.53 - 10.36 (m, 1H), 8.72 - 8.39 (m, 1H), 7.66 - 7.06 (m, 3H), 4.77 (s, 1H),
4.63 (d,
J = 6.1 Hz, 2H), 4.14 (dt,
J = 15.0, 7.7 Hz, 1H), 3.89 (d,
J= 14.5 Hz, 1H), 3.68 (dd,
J= 14.6, 1.9 Hz, 1H), 3.08 (ddd,
J= 12.0, 6.8, 3.6 Hz, 1H), 2.08 - 1.59 (m, 5H), 1.19 - 1.00 (m, 1H).
Example 124: Synthesis of (6S)-9-chloro-1-hydroxy-2,14-dioxo-N-(2,4,6-trifluorobenzyl)-2,7,12,14-tetrahydro-6H-6,13-methanobenzo[f]pyrido[1,2-a][1,4]diazonine-3-carboxamide
and (6R)-9-chloro-1-hydroxy-2,14-dioxo-N-(2,4,6-trifluorobenzyl)-2,7,12,14-tetrahydro-6H-6,13-methanobenzo[f]pyrido[1,2-a][1,4]diazonine-3-carboxamide
(127-1 and 127-2):
[0843]

Synthesis of 7-chloro-1,2,4,5-tetrahydro-3H-benzo[c]azepin-3-one and 7-chloro-1,3,4,5-tetrahydro-2H-benzo[d]azepin-2-one
(127a-1 and 127a-2):
[0844] Into a solution of 6-chloro-3,4-dihydronaphthalen-2(1H)-one (2 g, 11.1 mmol) in MsOH
(10 mL) was added sodium azide (828 mg, 12.7 mmol) in three portions over 15 min in
an ice-salt bath. The reaction mixture was stirred at 0 °C for 15 min, then at rt
for 3 h. The reaction mixture was quenched with sat. NaHCO
3 at 0 °C until the mixture was slightly basic. The reaction mixture was then extracted
with EtOAc, the organic phase was separated, dried over MgSO
4, filtered, concentrated down, and purified by silica gel column chromatography, eluting
with 0-100% EtOAc/hexane and then 0-20% DCM/MeOH. The title compounds
(127a-1 and
127a-2) were separated after multiple chromatographies.
[0845] 127a-1: 1H NMR (400 MHz, Chloroform-
d) δ 7.23 (d,
J = 2.1 Hz, 1H), 7.18 (d,
J = 7.5 Hz, 1H), 7.08 (d,
J= 8.0 Hz, 1H), 6.27 (s, 1H), 4.37 (s, 2H), 3.18 - 3.01 (m, 2H), 2.84 (t,
J = 6.6 Hz, 2H).
[0846] 127a-2: 1H NMR (400 MHz, Chloroform-
d) δ 7.21 - 7.13 (m, 2H), 7.10 (d,
J= 8.0 Hz, 1H), 5.84 (s, 1H), 3.84 (s, 2H), 3.66 - 3.57 (m, 2H), 3.17 - 3.09 (m, 2H).
Synthesis of tert-butyl (7-chloro-2,3,4,5-tetrahydro-1H-benzo[c]azepin-4-yl)carbamate
(127b):
[0847] The title compound was prepared in a similar manner to compound
43d, using 7-chloro-1,2,4,5-tetrahydro-3H-benzo[c]azepin-3-one
(127a-1) in place of 6-fluoro-1,3,4,5-tetrahydro-2H-benzo[b]azepin-2-one, and platinum (IV)
oxide in place of Pd/C.
Synthesis of (6S)- and (6R)-9-chloro-1-hydroxy-2,14-dioxo-N-(2,4,6-trifluorobenzyl)-2,7,12,14-tetrahydro-6H-6,13-methanobenzo[f]pyrido[1,2-a][1,4]diazonine-3-carboxamide (127-1 and 127-2):
[0848] The title compounds were prepared in a manner similar to compounds
40-1 and
40-2, using tert-butyl (7-chloro-2,3,4,5-tetrahydro-1H-benzo[c]azepin-4-yl)carbamate
(127b) in place of tert-butyl ((1S,6R)-2-azabicyclo[4.2.1]nonan-4-yl)carbamate
(40e).
[0849] 127-1, from peak 1: MS
(m/
z) 504.22 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.36 (t, J = 5.8 Hz, 1H), 8.51 (s, 1H), 7.44 - 7.14 (m, 5H), 5.49 (d, J = 16.6
Hz, 1H), 4.99 (td, J = 7.6, 2.3 Hz, 1H), 4.59 (d, J = 5.2 Hz, 2H), 4.46 (d, J = 16.7
Hz, 1H), 3.79 (d, J = 14.6 Hz, 1H), 3.58 (dd, J = 14.9, 2.8 Hz, 1H), 3.40 (d, J =
7.6 Hz, 2H), 2.94 - 2.85 (m, 1H).
[0850] 127-2, from peak 2: MS
(m/
z) 504.14 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.36 (t, J = 5.8 Hz, 1H), 8.51 (s, 1H), 7.37 (dd, J = 8.2, 2.3 Hz, 1H), 7.31
(d, J = 8.3 Hz, 1H), 7.28 - 7.16 (m, 3H), 5.49 (d, J = 16.6 Hz, 1H), 5.03 - 4.94 (m,
1H), 4.59 (d, J = 5.8 Hz, 2H), 4.46 (d, J = 16.7 Hz, 1H), 3.79 (d, J = 14.6 Hz, 1H),
3.58 (dd, J = 14.8, 2.8 Hz, 2H), 3.40 (s, 1H), 2.98 - 2.82 (m, 1H).
Example 125: Preparation of (6S)-9-chloro-N-(2,4-difluorobenzyl)-1-hydroxy-2,14-dioxo-2,7,12,14-tetrahydro-6H-6,13-methanobenzo[f]pyrido[1,2-a][1,4]diazonine-3-carboxamide
and (6R)-9-chloro-N-(2,4-difluorobenzyl)-1-hydroxy-2,14-dioxo-2,7,12,14-tetrahydro-6H-6,13-methanobenzo[f]pyrido[1,2-a][1,4]diazonine-3-carboxamide
(128-1 and 128-2):
[0851]

[0852] The title compounds were prepared in a manner similar to compounds
127-1 and
127-2, using methyl 3-(benzyloxy)-5-((2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate
in place of methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate.
[0853] 128-1, from peak 1: MS
(m/
z) 486.13 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.33 (t, J = 5.9 Hz, 1H), 8.53 (s, 1H), 7.48 - 7.19 (m, 5H), 7.08 (td, J = 8.5,
2.6 Hz, 1H), 5.50 (d, J = 16.6 Hz, 1H), 5.02 (d, J = 8.5 Hz, 1H), 4.57 (d, J = 5.9
Hz, 2H), 4.47 (d, J = 16.7 Hz, 1H), 3.80 (d, J = 14.6 Hz, 1H), 3.59 (dd, J = 14.8,
2.7 Hz, 1H), 3.43 (s, 2H), 2.90 (dd, J = 14.9, 7.5 Hz, 1H).
[0854] 128-2, from peak 2: MS
(m/
z) 486.27 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.33 (t, J = 5.9 Hz, 1H), 8.53 (s, 1H), 7.50 - 7.20 (m, 5H), 7.08 (td, J = 8.6,
2.5 Hz, 1H), 5.50 (d, J = 16.6 Hz, 1H), 5.01 (s, 1H), 4.57 (d, J = 5.9 Hz, 2H), 4.47
(d, J = 16.7 Hz, 1H), 3.80 (d, J = 14.6 Hz, 1H), 3.59 (dd, J = 14.7, 2.6 Hz, 1H),
3.42 (d, J = 7.5 Hz, 2H), 2.90 (dd, J = 14.9, 7.6 Hz, 1H).
Example 126: Preparation of (7'S)-12'-hydroxy-1',11'-dioxo-N-(2,4,6-trifluorobenzyl)-1',4',5',6',7',11'-hexahydrospiro[cyclopropane-1,3'-[2,7[methanopyrido[1,2-a][1,4]diazonine]-10'-carboxamide
(129):
[0855]

Synthesis of 1-vinylcyclopropan-1-amine hydrochloride (129a):
[0856] A solution of 1-vinylcyclopropanecarboxylic acid (974.0 mg, 8.687 mmol) and triethylamine
(1.25 mL, 8.968 mmol) in
tert-butanol (40 mL) was stirred at rt as diphenyl phosphoryl azide (2.1 mL, 9.744 mmol)
was added. After addition, the reaction mixture was stirred in an 87 °C bath for 18
h. The reaction mixture was concentrated, and the residue was dissolved in ethyl acetate
(50 mL), before the solution was washed with saturated sodium bicarbonate (50 mL)
and water (50 mL). The aqueous fractions were extracted with ethyl acetate (30 mL),
and the organic fractions were combined, dried over MgSO
4, and concentrated. The residue was purified by column chromatography on silica gel
eluting with 0-30% ethyl acetate in hexane to get
tert-butyl (1-vinylcyclopropyl)carbamate.
1H NMR (400 MHz, Chloroform-
d) δ 5.43 (dd, J = 17.0, 10.4 Hz, 1H), 5.16-4.85 (m, 3H), 1.45 (s, 9H), 1.08 (s, 2H),
0.91 (s, 2H).
[0857] A solution of
tert-butyl N-(1-vinylcyclopropyl)carbamate (1.2 g, 6.573 mmol) and 4 M HCl in dioxane (16.5
mL) was stirred at rt for 1.5 h and then concentrated completely to get the title
compound
(129a), which was carried forward without further purification.
Synthesis of tert-butyl (S)-(1-hydroxypent-4-en-2-yl)carbamate (129b):
[0858] A solution of (
S)-2-((tert-butoxycarbonyl)amino)pent-4-enoic acid (6.0 g, 26.2 mmol) in tetrahydrofuran
(90 mL) was stirred at 0 °C, as 1 M lithium aluminum hydride (34.1 mL) was added dropwise.
After 30 min, the reaction mixture was diluted with ethyl ether (150 mL) and vigorously
stirred at 0 °C, as water (1.3 mL), 15% sodium hydroxide (1.3 mL), and water (3.9
mL) were sequentially added dropwise. After 30 min, anhydrous sodium sulfate was added
to the mixture and filtered through celite after 2 min. The filtrate was concentrated,
and the resulting residue was purified by column chromatography on silica gel, eluting
with 0-100% ethyl acetate in hexane, to obtain the title compound
(129b). MS (
m/
z) 201.83 [M+H]
+.
Synthesis of benzyl (S)-(2-((tert-butoxycarbonyl)amino)pent-4-en-1-yl)(1-vinylcyclopropyl)carbamate(129c):
[0859] A solution of
tert-butyl (
S)-(1-hydroxypent-4-en-2-yl)carbamate
(129b, 1.5 g, 6.195 mmol) in dichloromethane (80 mL) was stirred at 0 °C bath as Dess-Martin
periodinane (3.9 g, 9.094 mmol) was added. After 10 min, the reaction mixture was
warmed to rt, and stirred for 1.5 h. Additional Dess-Martin periodinane (750 mg, 1.768
mmol) was added and the resulting solution was stirred at rt for 1 h. The reaction
mixture was cooled to 0 °C and saturated sodium bicarbonate (100 mL) was added. After
separating the two fractions, the aqueous fraction was extracted with dichloromethane
(100 mL). The organic fractions were washed with 10% sodium thiosulfate solution (100
mL), and brine (70 mL), combined, dried over MgSO
4, and concentrated. The residue was purified by column chromatography on silica gel,
eluting with 0-50% ethyl acetate in hexane, to get tert-butyl (
S)-(1-oxopent-4-en-2-yl)carbamate.
[0860] A suspension of
tert-butyl (
S)-(1-oxopent-4-en-2-yl)carbamate (1.2 g, 6.254 mmol) and 1-vinylcyclopropanamine;hydrochloride
(129a, 6.574 mmol) in tetrahydrofuran (38 mL) was stirred at rt, as triethylamine (1.75
mL, 12.56 mmol) and sodium triacetoxyborohydride (2.0 g, 9.424 mmol) were added. The
resulting reaction mixture was stirred at rt for 19 h. The reaction mixture was concentrated
to remove most of the tetrahydrofuran, and diluted with saturated sodium bicarbonate
(100 mL), and extracted with ethyl acetate (100 mL x 3). The extracts were washed
with brine, and the organic fractions were combined, dried over MgSO
4, and concentrated to get tert-butyl (S)-(1-((1-vinylcyclopropyl)amino)pent-4-en-2-yl)carbamate.
[0861] A mixture of tert-butyl (S)-(1-((1-vinylcyclopropyl)amino)pent-4-en-2-yl)carbamate,
and potassium carbonate (1.0 g, 16.38 mmol) in 1,4-dioxane (40 mL) and water (40 mL)
was stirred at 0 °C, as benzyl chloroformate (1.3 mL, 8.852 mmol) was added. The resulting
mixture was stirred at 0 °C for 2 h and then at rt overnight. The reaction mixture
was diluted with saturated ammonium chloride (100 mL) and the product was extracted
with ethyl acetate (100 mL x 2). The extracts were combined, dried over MgSO
4, concentrated, and the residue purified by column chromatography on silica gel, eluting
with 0-30% ethyl acetate in hexane, to get the title compound
(129c). MS
(m/
z) 400.80 [M+H]
+.
Synthesis of benzyl (S)-6-((tert-butoxycarbonyl)amino)-4-azaspiro[2.61non-8-ene-4-carboxylate (129d):
[0862] The title compound was synthesized in a manner similar to compound
65c, using benzyl (
S)-(2-((
tert-butoxycarbonyl)amino)pent-4-en-1-yl)(1-vinylcyclopropyl)carbamate
(129c) in place of benzyl allyl(((
E)-1-((tert-butoxycarbonyl)amino)-2-vinylcyclopropyl)methyl)carbamate
(65b). MS
(m/
z) 395.19 [M+H]
+. Benzyl (
S)
-6
-((
tert-butoxycarbonyl)amino)-4-azaspiro[2.6]non-8-ene-4-carboxylate
(129d) was further purified by preparative SFC chromatography on an ID-5um column using
30% IPA-NH
3 co-solvent.
Synthesis of (7'S)-12'-(benzyloxy)-1',11'-dioxo-N-(2,4,6-trifluorobenzyl)-1',4',5',6',7',11'-hexahydrospiro[cyclopropane-1,3'-[2,7]methanopyrido[1,2-a][1,4]diazonine]-10'-carboxamide,
(3S, 7S)-12-(benzyloxy)-3-ethyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide,
and (3R, 7S)-12-(benzyloxy)-3-ethyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(129e-1, 129e-2, and 129e-3):
[0863] A mixture of benzyl (
S)-6-((
tert-butoxycarbonyl)amino)-4-azaspiro[2,6]non-8-ene-4-carboxylate
(129d, 107.5 mg, 288.62 µmol) and 10% palladium on carbon (12.2 mg) in ethyl acetate (4
mL) and ethanol (2 mL) was stirred under H
2 atmosphere. After 1 h, the reaction mixture was filtered and the filtrate was concentrated.
[0864] The residue was dissolved in 4 N HCl in 1,4-dioxane (4 mL) and stirred at rt for
1 h before the reaction mixture was concentrated.
[0865] The above residue, methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate
(129.1 mg, 288.58 umol), and sodium bicarbonate (96.2 mg, 1.145 mmol) in water (1.2
mL) and methanol (6 mL) was stirred at 50 °C. After 22 h, the reaction mixture was
heated at 60 °C for 6 h. The reaction mixture was concentrated to remove most of the
solvent, and the residue was dissolved in ethyl acetate (25 mL) and brine (25 mL),
and separated. The aqueous fraction was extracted with ethyl acetate (25 mL), and
the organic fractions were washed with brine, combined, dried over MgSO
4, and concentrated. The residue was purified by preparative HPLC (column, Gemini 10u
C18 110A, AXI/; 250 x 21.2 mm) eluting with 30-90% acetonitrile in water (0.1% TFA),
to obtain the title compounds, stereochemistry drawn arbitrarily.
129e-1: MS
(m/
z) 538.14 [M+H]
+;
129e-2: MS (
m/
z) 540.16 [M+H]
+;
129e-3: MS
(m/
z) 540.17 [M+H]
+.
Synthesis of (7'S)-12'-hydroxy-1',11'-dioxo-N-(2,4,6-trifluorobenzyl)-1',4',5',6',7',11'-hexahydrospiro[cyclopropane-1,3'-[2,7]methanopyrido[1,2-a][1,4][,4]diazonine]-10'-carboxamide
(129):
[0866] (
7'S)-12'-(benzyloxy)-1',11'-dioxo-N-(2,4,6-trifluorobenzyl)-1',4',5',6',7',11'-hexahydrospiro[cyclopropane-1,3'-[2,7]methanopyrido[1,2-a][1,4]diazonine]-10'-carboxamide
(
129e-1, 56.5 mg, 105 umol) was dissolved in TFA (2 mL) and stirred at rt for 2 h. The reaction
mixture was concentrated and the residue was purified by preparative HPLC (column,
Gemini 10u C18 110A, AXI/; 250 x 21.2 mm) eluting with 10-65% acetonitrile in water
(0.1% TFA) to afford the title compound. MS
(m/
z) 448.21 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) δ 10.34 (s, 1H), 8.37 (s, 1H), 6.91 - 6.76 (m, 2H), 4.58 (m, 3H), 3.83 - 3.67 (m,
2H), 2.53 (dt, J = 15.9, 8.0 Hz, 1H), 2.17 - 2.05 (m, 1H), 1.85 - 1.51 (m, 4H), 1.42
(ddd, J = 14.2, 6.4, 2.2 Hz, 1H), 0.99 (ddd, J = 9.7, 6.8, 5.6 Hz, 1H), 0.72 (dddd,
J = 10.5, 6.5, 5.0, 1.2 Hz, 1H), 0.50 (ddd, J = 9.7, 6.9, 5.0 Hz, 1H).
19F NMR (376 MHz, Acetonitrile-d
3) δ -77.36, -111.24 (ddd, J = 15.0, 9.2, 6.2 Hz), -113.93 (t, J = 7.1 Hz).
Example 127: Synthesis of (3R,7S)-3-ethyl-12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
and (3S, 7S)-3-ethyl-12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(130-1 and 130-2):
[0867]

[0868] The title compounds were synthesized in a similar manner to compound 129, using (
3R,
7S)-12-(benzyloxy)-3-ethyl-1,1-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
or
(3S,
7S)-12-(benzyloxy)-3-ethyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(129e-2 or
129e-3) in place of (
7'
S)-12'-(benzyloxy)-1',11'-dioxo-N-(2,4,6-trifluorobenzyl)-1',4',5',6',7',11'-hexahydrospiro
[cyclopropane-1,3'-[2,7]methanopyrido[1,2-a][1,4]diazonine]-10'-carboxamide
(129e-1)
[0869] 130-1: MS
(m/
z) 450.23 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) δ 10.43 (s, 1H), 8.37 (s, 1H), 6.91 - 6.76 (m, 2H), 4.59 (d, J = 5.8 Hz, 2H), 4.53
(d, J = 3.8 Hz, 1H), 4.25 (tt, J = 10.9, 6.0 Hz, 1H), 3.64 (dt, J = 14.8, 2.7 Hz,
1H), 3.52 (dd, J = 14.7, 1.8 Hz, 1H), 2.18 - 2.01 (m, 2H), 1.88 - 1.73 (m, 1H), 1.67
(ddt, J = 15.3, 7.7, 4.0 Hz, 1H), 1.62 - 1.45 (m, 2H), 1.40 (dt, J = 14.5, 11.3 Hz,
1H), 1.19 - 1.04 (m, 1H), 0.96 (t, J = 7.3 Hz, 3H).
19F NMR (376 MHz, Acetonitrile-d
3) δ -77.34, -111.27 (ddd, J = 15.3, 9.3, 6.3 Hz), -113.92 (t, J = 7.1 Hz).
[0870] 130-2: MS
(m/
z) 450.22 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) δ 10.38 (s, 1H), 8.34 (d, J = 5.7 Hz, 1H), 6.84 (t, J = 8.5 Hz, 2H), 4.58 (d, J
= 5.4 Hz, 2H), 4.50 (s, 1H), 3.85 (d, J = 14.7 Hz, 1H), 3.50 (dd, J = 14.8, 2.5 Hz,
1H), 3.19 (d, J = 10.1 Hz, 1H), 2.57 (dt, J = 15.6, 7.8 Hz, 1H), 2.48 - 2.27 (m, 1H),
1.83 - 1.70 (m, 3H), 1.65 (td, J = 10.4, 6.9 Hz, 2H), 1.48 (d, J = 9.7 Hz, 1H), 1.05
(t, J = 7.2 Hz, 3H).
19F NMR (376 MHz, Acetonitrile-d
3) δ -77.25, - 111.28 (ddd, J = 15.0, 9.3, 6.0 Hz), -113.95 (q, J = 11.7, 9.5 Hz).
Example 128: Preparation of (3R,7S)-3-(difluoromethyl)-12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(131):
[0871]

Synthesis of (R)-1-((tert-butyldimethylsilyl)oxy)but-3-en-2-amine (131a):
[0872] A suspension of (
2R)-2-aminobut-3-en-1-ol hydrochloride (1.0 g, 8.18 mmol) and triethylamine (3.5 mL,
25.11 mmol) in dichloromethane (12 mL) was stirred at 0 °C, as
tertbutyldimethylsilyl chloride (1.35 g, 8.957 mmol) was added. After addition, the reaction
mixture was stirred at rt for 23 h. The reaction mixture was diluted with dichloromethane
(30 mL) and washed with saturated sodium bicarbonate solution (50 mL). The aqueous
fraction was extracted with dichloromethane (2 x 30 mL), and the combined organic
fractions were washed with brine (30 mL), dried over MgSO
4, and concentrated. The residue was dissolved in ethyl ether, filtered, and the filtrate
was concentrated to get the crude TBS protected product
(131a). MS (
m/
z) 202.01 [M+H]
+.
Synthesis of benzyl (S)-(1-hydroxypent-4-en-2-yl)carbamate (131b):
[0873] A solution of (
2S)-2-amino-4-penten-1-ol (2.0 g, 14.53 mmol) and potassium carbonate (6.0 g, 43.63
mmol) in water (36 mL) and 1,4-dioxane (36 mL) was stirred at 0 °C, as benzyl chloroformate
(2.6 mL, 17.52 mmol) was added. The mixture was stirred at 0 °C for 2 h, and then
at rt overnight. The reaction mixture was diluted with saturated sodium bicarbonate
(150 mL), and the mixture was extracted with ethyl acetate (150 mL x 2). After the
extracts were washed with water (150 mL), the organic fractions were combined, dried
over MgSO
4, and concentrated. The residue was purified by column chromatography on silica gel,
eluting with 0-70% ethyl acetate in hexane, to obtain the title compound
(131b). MS
(m/
z) 235.84 [M+H]
+.
Synthesis of benzyl (3S, 7R)-3-(((benzyloxy)carbonyl)amino)-7-(((tertbutyldimethylsilyl)oxy)methyl)-2,3,4,7-tetrahydro-1H-azepine-1-carboxylate (131c):
[0874] The title compound was prepared in a similar manner to compound
129d, using (R)-1-((
tert-butyldimethylsilyl)oxy)but-3-en-2-amine
(131a) in place of 1-vinylcyclopropanamine; hydrochloride
(129a), and benzyl (
S)-(1-hydroxypent-4-en-2-yl)carbamate
(131b) in place of
tert-butyl (
S)-(1-hydroxypent-4-en-2-yl)carbamate
(129b). MS
(m/
z) 525.01 [M+H]
+.
Synthesis of (3R,7S)-12-(benzyloxy)-3-(((tert-butyldimethylsilyl)oxy)methyl)-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyridor[1,2-a][1,4]diazonine-10-carboxamide
(131d):
[0875] A mixture of benzyl (
3S,
7R)-3-(((benzyloxy)carbonyl)amino)-7-(((tertbutyldimethylsilyl)oxy) methyl)-2,3,4,7-tetrahydro-1H-azepine-1-carboxylate
(131c, 262.8 mg, 500.8 µmol) and 10% palladium on carbon (51.26 mg) in ethanol (10 mL) and
EtOAc (5 mL) was stirred under H
2 atmosphere for 2 h. The reaction mixture was filtered and concentrated to dryness.
[0876] A mixture of the above residue, methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)
carbamoyl)-4H-pyran-2-carboxylate (224.5 mg, 501.83 umol), and sodium bicarbonate
(96.2 mg, 1.15 mmol) in water (1.2 mL) and methanol (6 mL) was stirred at 50 °C for
22 h followed by at 60 °C for 6 h. The reaction mixture was concentrated to remove
most of solvent and the residue was dissolved in ethyl acetate (25 mL) and water (25
mL) before two fractions were separated. After the aqueous fraction was extracted
with ethyl acetate (25 mL), two organic fractions were washed with brine, combined,
dried over MgSO
4, and concentrated. The residue was purified by column chromatography on silica gel,
eluting with 0-9.5% methanol in dichloromethane, to get the title compound
(131d). MS
(m/
z) 656.23 [M+H]
+.
Synthesis of (3R,7S)-12-(benzyloxy)-3-(difluoromethyl)-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(131e):
[0877] (3R, 7S)-12-(benzyloxy)-3-(((tert-butyldimethylsilyl)oxy)methyl)-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(131d, 230.2 mg, 351.03 umol) was dissolved in 4 N HCl in dioxane (3 mL) in 0 °C bath and
stirred for 30 min. The reaction mixture was concentrated and the residue was purified
by column chromatography on silica gel eluting with 0-20% methanol in dichloromethane
to get the deprotected alcohol. MS
(m/
z) 542.17 [M+H]
+.
[0878] A solution of (
3R,
7S)-12-(benzyloxy)-3-(hydroxymethyl)-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(76.9 mg, 142.01 umol) in dichloromethane (10 mL) was stirred at rt as Dess-Martin
periodinane (91.9 mg, 216.67 umol) was added. After 30 min at rt, the reaction mixture
was cooled to 0 °C and saturated sodium bicarbonate (10 mL), 10% sodium thiosulfate
solution (10 mL), and dichloromethane (10 mL) were added, before two fractions were
separated. After the aqueous fraction was extracted with ethyl acetate (10 mL x 2),
the organic fractions were combined, dried over MgSO
4, and concentrated. The crude residue was purified by column chromatography on silica
gel eluting with 0-8% methanol in dichloromethane to get (3R,7S)-12-(benzyloxy)-3-formyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide.
MS
(m/
z) 540.14 [M+H]
+.
[0879] A solution of (3
R,7
S)-12-(benzyloxy)-3-formyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(63.4 mg, 118 umol) in dichloromethane (2 mL) was stirred at 0 °C as (diethylamino)sulfur
trifluoride (0.017 mL, 129 umol) was added. After 30 min, the reaction mixture was
stirred at rt for 22 h. Saturated sodium bicarbonate (20 mL) was added, and the mixture
was extracted with dichloromethane (2 x 20 mL). The combined extracts were dried over
MgSO
4, concentrated, and the residue was purified by column chromatography on silica gel,
eluting with 0-8% methanol in dichloromethane, to get the title compound
(131e). MS
(m/
z) 562.15 [M+H]
+.
Synthesis of (3R,7S)-3-(difluoromethyl)-12-hydroxy-1,11-dioxo-N-(2,4,6-tlifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(131):
[0880] (
3R,
7S)-12-(benzyloxy)-3-(difluoromethyl)-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,[1,2-a][1,4]diazonine-10-carboxamide
(131e) (66.3 mg, 118 umol) was dissolved in trifluoroacetic acid (2 mL) and stirred at rt.
After 1 h, the reaction mixture was concentrated and the residue was purified by preparative
HPLC (column, Gemini 10u C18 110A, AXI/; 250 x 21.2 mm), eluting with 10-60% acetonitrile
in water (0.1% trifluoroacetic acid), to get the title compound
(131). MS
(m/
z) 472.20 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) δ 10.32 (s, 1H), 8.39 (d, J = 2.9 Hz, 1H), 6.94 - 6.75 (m, 2H), 6.03 (td, J = 54.9,
3.5 Hz, 1H), 4.65 (dt, J = 15.0, 3.3 Hz, 1H), 4.59 (s, 2H), 4.55 (s, 1H), 3.83 (d,
J = 14.8 Hz, 1H), 3.72 (dd, J = 15.1, 1.7 Hz, 1H), 2.16 (ddd, J = 17.1, 12.3, 5.0
Hz, 2H), 1.92 - 1.73 (m, 3H), 1.24 - 1.09 (m, 1H).
19F NMR (376 MHz, Acetonitrile-d
3) δ -77.36, -111.06 - -111.40 (m), -113.75 - -114.10 (m), -125.91 - -127.10 (m), -128.45
(ddd, J = 286.8, 55.2, 12.6 Hz).
Example 129: Preparation of (4R,7S)-4-fluoro-12-hydroxy-4-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide,
(4S,7S)-4-fluoro-12-hydroxy-4-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide,
and (7S)-12-hydroxy-4-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[l,2-a][l,4]diazonine-10-carboxamide
(132-1, 132-2, and 132-3):
[0881]

Synthesis of (4S,7S)-12-(benzyloxy)-4-hydroxy-4-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
and (4R,7S)-12-(benzyloxy)-4-hydroxy-4-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(132a-1 and 132a-2):
[0882] The title compounds were synthesized in a similar manner to compounds
107a-1 and
107a-2, using (7S)-12-(benzyloxy)-1,4,11-trioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-
hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide (79a), in place of (5R,7S)-5,12-dihydroxy-5-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(103a).
Synthesis of (4R,7S)-4-fluoro-12-hydroxy-4-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyridor[1,2-a][1,4]diazonine-10-carboxamide,
(4S,7S)-4-fluoro-12-hydroxy-4-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide, and (7S)-12-hydroxy-4-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide (132-1, 132-2, and 132-3):
[0883] The title compounds were prepared in a manner similar to compounds
115-1, 115-2, and
116-1, using (4S,7S)-12-(benzyloxy)-4-hydroxy-4-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[[1,2-a][1,4]diazonine-10-carboxamide
or (4R,7S)-12-(benzyloxy)-4-hydroxy-4-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[[1,2-a][1,4]diazonine-10-carboxamide
(
132a-1 or
132a-2) in place of (5S,7S)-12-(benzyloxy)-5-hydroxy-5-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
or (5R,7S)-12-(benzyloxy)-5-hydroxy-5-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(
107a-1 or
107a-2).
[0884] 132-1: MS
(m/
z) 454.22 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) d 9.32 (s, 1H), 8.40 (d, J = 5.3 Hz, 1H), 6.87 (t, J = 8.5 Hz, 1H), 6.68 (t, J =
8.5 Hz, 1H), 4.93 - 4.69 (m, 2H), 4.58 (q, J = 15.7, 14.9 Hz, 2H), 4.42 (dd, J = 14.8,
4.8 Hz, 1H), 3.83 (dd, J = 14.9, 10.8 Hz, 1H), 3.64 (dd, J = 14.9, 6.1 Hz, 1H), 3.11
(td, J = 37.5, 15.2 Hz, 2H), 2.11 (m, 2H), 1.48 - 1.33 (m, 3H).
[0885] 132-2: MS
(m/
z) 454.22 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) d 8.44 (d, J = 12.1 Hz, 1H), 6.96 - 6.82 (m, 1H), 6.69 (t, J = 8.5 Hz, 1H), 5.48
(s, 1H), 4.83 (dd, J = 15.2, 7.5 Hz, 2H), 4.65 (d, J = 16.7 Hz, 2H), 4.54 - 4.27 (m,
3H), 3.91 (d, J = 14.9 Hz, 2H), 3.74 (d, J = 14.5 Hz, 2H), 3.51 - 3.23 (m, 3H), 2.11
(s, 3H), 1.44 (dd, J = 22.1, 3.6 Hz, 3H).
[0886] 132-3: MS
(m/
z) 434.22 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) d 10.38 (d, J = 25.2 Hz, 1H), 9.30 (s, 1H), 8.39 (d, J = 11.5 Hz, 1H), 6.87 (t,
J = 8.5 Hz, 1H), 6.69 (t, J = 8.5 Hz, 1H), 5.39 (s, 1H), 5.15 (d, J = 34.3 Hz, 1H),
4.96 - 4.69 (m, 2H), 4.62 (s, 1H), 4.43 (s, 1H), 4.00 - 3.64 (m, 2H), 2.85 (m, 2H),
1.72 (s, 3H).
Example 130: Preparation of (7S)-5-fluoro-12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(133):
[0887]

[0888] (7S)-12-(benzyloxy)-5-fluoro-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(133a) was prepared in a similar manner to compound
113a-2, using (7S)-12-(benzyloxy)-1,5,11-trioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(103a) in place of (3S,7S)-12-(benzyloxy)-3-methyl-1,5,11-trioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide.
[0889] The title compound was prepared in a similar manner to compound
113, using (7S)-12-(benzyloxy)-5-fluoro-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(133a) in place of (3S,7S)-12-(benzyloxy)-5,5-difluoro-3-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-
hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide (
113a-1). MS
(m/
z): 438.22 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) δ 10.28 (s, 1H), 8.43 (s, 1H), 6.86 (t, J = 8.5 Hz, 2H), 5.46 (d, J = 22.3 Hz, 1H),
5.04 (s, 1H), 4.61 (d, J = 4.9 Hz, 2H), 4.46 (q, J = 10.3, 9.7 Hz, 1H), 3.91 (s, 2H),
3.42-3.31(m, 1H), 3.29-3.14(m, 1H), 2.60-2.40 (m, 1H).
Example 131: Preparation of (7S)-N-(2,4-difluorobenzyl)-7-ethyl-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-27-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
and (7R)-N-(2,4-difluorobenzyl)-7-ethyl-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-27-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(134-1 and 134-2):
[0890]

[0891] The title compounds were prepared similarly to compounds
59-1 and
59-2, using EtMgBr in place of MeMgBr, and methyl 3-(benzyloxy)-5-((2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate
in place of methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate.
The stereoisomers were separated by SFC chromatography on an IA column using methanol
co-solvent.
[0892] 134-1: MS
(m/
z) 449.9 [M+H]
+.
1H NMR (400 MHz, Chloroform-d) δ 10.49 (s, 1H), 8.5 (s, 1H), 7.39 (s, 1H), 6.83 (m,
2H), 4.66 (m, 2H), 4.48 (m, 1H), 3.80 (m, 1H), 3.39 (m, 1H), 3.07 (m, 1H), 2.35-0.80
(m, 11H).
[0893] 134-2: MS
(m/
z) 449.9 [M+H]
+.
1H NMR (400 MHz, Chloroform-d) δ 10.48 (s, 1H), 8.5 (s, 1H), 7.39 (s, 1H), 6.83 (m,
2H), 4.7 (m, 2H), 4.62 (m, 1H), 3.81 (m, 1H), 3.39 (m, 1H), 3.07 (m, 1H), 2.31-0.75
(m, 11H).
Example 132: Preparation of (12S)-7-hydroxy-3-methyl-6,8-dioxo-N-(2,4,6-trifluorobenzyl)-6,8,12,13-tetrahydro-4H-5,12-methanoisoxazolo[4,5-f]pyrido[1,2-a][1,4]diazonine-9-carboxamide
and (5S)-10-hydroxy-3-methyl-9,11-dioxo-N-(2,4,6-trifluorobenzyl)-4,9,11,13-tetrahydro-5H-5,12-methanoisoxazolo[5,4-f]pyrido[1,2-a][1,4]diazonine-8-carboxamide
(135-1 and 135-2):
[0894]

Synthesis of (Z)-N-hydroxyacetimidoyl chloride (135a):
[0895] To a solution of acetaldehyde oxime (1.598 g, 27.1 mmol) in DMF (50 mL), NCS (3.61
g, 27.1 mmol) was added at rt, then the reaction was heated to 50 °C, and stirred
for 2 hr. The reaction mixture was extracted with ethyl acetate (150 mL) and washed
with brine. The organic layer was dried over MgSO
4, and the solvent removed to obtain the title compound
(135a), which was used for the next step of the reaction.
Synthesis of benzyl (7S)-7-(((benzyloxy)carbonyl)amino)-3-methyl-3a,4,6,7,8,8a-hexahydro-5H-isoxazolo[4,5-c]azepine-5-carboxylate
and benzyl (5S)-5-(((benzyloxy)carbonyl)amino)-3-methyl-3a,4,5,6,8,8a-hexahydro-7H-isoxazolo[5,4-c]azepine-7-carboxylate
(135b-1 and 135b-2):
[0896] To a solution of benzyl (S)-3-(((benzyloxy)carbonyl)amino)-2,3,4,7-tetrahydro-1H-azepine-1-carboxylate
(1.22 g, 3.21 mmol) and TEA (813 mg, 8.03 mmol) in DCM (50 mL) N-hydroxyacetimidoyl
chloride
(135a) was added at rt. After the reaction mixture was stirred for 48 hr, it was extracted
with ethyl acetate (150 mL), washed with brine, and dried over MgSO
4. The solvent was then removed to obtain the title compounds (
135b-1 and
135b-2) as a mixture of regioisomers, which were used subsequently without further purification.
MS
(m/
z) 438.2 [M+H]
+.
Synthesis of benzyl (S)-7-(((benzyloxy)carbonyl)amino)-3-methyl-4,6,7,8-tetrahydro-5H-isoxazolo[4,5-c]azepine-5-carboxylate
and benzyl (S)-5-(((benzyloxy)carbonyl)amino)-3-methyl-4,5,6,8-tetrahydro-7H-isoxazolo[5,4-c]azepine-7-carboxylate
(135c-1 and 135c-2):
[0897] To a solution of crude mixture of benzyl (7S)-7-(((benzyloxy)carbonyl)amino)-3-methyl-3a,4,6,7,8,8a-hexahydro-5H-isoxazolo[4,5-c]azepine-5-carboxylate
andbenzyl(5S)-5-(((benzyloxy)carbonyl)amino)-3-methyl-3a,4,5,6,8,8a-hexahydro-7H-isoxazolo[5,4-c]azepine-7-carboxylate
(135b-1 and
135b-2, 890 mg) in DCE (100 mL), DDQ (462 mg, 2.03 mmol) was added. The solution was heated
to reflux for 4 hr. The reaction was concentrated, and the residue purified by silica-gel
column to provide the title compounds
(135c-1 and
135c-2) as a mixture of regioisomers. MS
(m/
z) 436.1 [M+H]
+.
Synthesis of (S)-3-methyl-5,6,7,8-tetrahydro-4H-isoxazolo[4,5-c]azepin-7-amine and
(S)-3-methyl-5,6,7,8-tetrahydro-4H-isoxazolo[5,4-c]azepin-5-amine (135d-1 and 135d-2):
[0898] To a solution of benzyl (S)-7-(((benzyloxy)carbonyl)amino)-3-methyl-4,6,7,8-tetrahydro-5H-isoxazolo[4,5-c]azepine-5-carboxylate
and benzyl (S)-5-(((benzyloxy)carbonyl)amino)-3-methyl-4,5,6,8-tetrahydro-7H-isoxazolo[5,4-c]azepine-7-carboxylate
(135c-1 and
135c-2, 354 mg) in DCM (10 mL), TMSI (1 mL) was added. After 30 min, HCl (1 N, 2 mL) was
added and stirred for 30 min. Concentration gave the title compounds
(135d-1 and
135d-2) as a mixture of regioisomers, which were used subsequently without further purification.
MS
(m/
z) 167.95 [M+H]
+.
Synthesis of (12S)-7-hydroxy-3-methyl-6,8-dioxo-N-(2,4,6-trifluorobenzyl)-6,8,12,13-tetrahydro-4H-5,12-methanoisoxazolo[4,5-f]pyrido[1,2-a][1,4]diazonine-9-carboxamide
and (5S)-10-hydroxy-3-methyl-9,11-dioxo-N-(2,4,6-trifluorobenzyl)-4,9,11,13-tetrahydro-5H-5,12-methanoisoxazolo[5,4-f]pyrido[1,2-a][1,4]diazonine-8-carboxamide
(135-1 and 135-2):
[0899] The title compounds were prepared similarly to compound
28 using (S)-3-methyl-5,6,7,8-tetrahydro-4H-isoxazolo[4,5-c]azepin-7-amine and (S)-3-methyl-5,6,7,8-tetrahydro-4H-isoxazolo[5,4-c]azepin-5-amine
(135d-1 and
135d-2) in place of 1,4-oxazepan-6-amine, and methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate
in place of methyl 3-(benzyloxy)-5-((2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate,
and separating the regioisomers by normal phase chromatography prior to TFA deprotection.
[0900] 135-1, from peak 1: MS
(m/
z) 475.04 [M+H]
+.
1H NMR (400 MHz, Chloroform-d) δ 10.27 (t, J = 5.8 Hz, 1H), 8.54 (s, 1H), 6.67 (t,
J = 8.1 Hz, 2H), 5.36 (dd, J = 16.5, 1.7 Hz, 1H), 4.84 (d, J = 9.3 Hz, 1H), 4.67 (t,
J = 6.4 Hz, 2H), 4.13 (d, J = 14.4 Hz, 1H), 4.01 - 3.74 (m, 4H), 3.05 (d, J = 18.3
Hz, 1H), 2.25 (s, 3H).
[0901] 135-2, from peak 2: MS
(m/
z) 475.05 [M+H]
+.
1H NMR (400 MHz, Chloroform-d) δ 10.33 (d, J = 6.2 Hz, 1H), 8.59 (s, 1H), 6.67 (t,
J = 8.1 Hz, 2H), 5.70 (d, J = 17.2 Hz, 1H), 4.85 (s, 1H), 4.68 (t, J = 5.7 Hz, 2H),
4.34 (d, J = 17.2 Hz, 1H), 4.13 (d, J = 14.3 Hz, 1H), 3.76 (d, J = 14.3 Hz, 1H), 3.34
(d, J = 14.8 Hz, 1H), 2.69 (d, J = 17.0 Hz, 1H), 2.20 (s, 3H).
Example 133: Preparation of (13S)-10-chloro-4-hydroxy-3,5-dioxo-N-(2,4,6-trifluorobenzyl)-3,5,8,13-tetrahydro-7H-6,13-methanobenzo[g]pyrido[1,2-a][1,4]diazonine-2-carboxamide
and (13R)-10-chloro-4-hydroxy-3,5-dioxo-N-(2,4,6-trifluorobenzyl)-3,5,8,13-tetrahydro-7H-6,13-methanobenzo[g]pyrido[1,2-a][1,4]diazonine-2-carboxamide
(136-1 and 136-2):
[0902]

[0903] The title compounds were prepared in a manner similar to compounds
127-1 and
127-2, using 7-chloro-1,3,4,5-tetrahydro-2H-benzo[d]azepin-2-one in place of 6-chloro-3,4-dihydronaphthalen-2(1H)-one.
[0904] 136-1: MS
(m/
z) 504.20 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.38 (t, J = 5.8 Hz, 1H), 10.23 (s, 1H), 9.02 (s, 1H), 7.50 - 7.31 (m, 2H), 7.31
- 7.14 (m, 2H), 6.02 (s, 1H), 4.73 - 4.55 (m, 2H), 4.45 (dd, J = 15.1, 2.7 Hz, 1H),
4.29 (td, J = 12.6, 5.4 Hz, 1H), 4.00 (d, J = 15.1 Hz, 1H), 3.48-3.41 (m, 2H), 2.88
(dd, J = 15.4, 5.4 Hz, 1H).
[0905] 136-2: MS
(m/
z) 504.21 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.38 (t, J = 5.7 Hz, 1H), 10.22 (s, 1H), 9.02 (s, 1H), 7.46 - 7.30 (m, 2H), 7.30
- 7.12 (m, 2H), 6.02 (s, 1H), 4.60 (d, J = 6.7 Hz, 2H), 4.45 (dd, J = 15.1, 2.8 Hz,
1H), 4.29 (td, J = 12.6, 5.4 Hz, 1H), 4.00 (d, J = 15.1 Hz, 1H), 3.60 (d, J = 8.0
Hz, 1H), 3.45 (s, 2H), 2.94 - 2.82 (m, 1H).
Example 134: Preparation of (4S,7S)-12-hydroxy-4-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
and (4R,7S)-12-hydroxy-4-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(137-1 and 137-2):
[0906]

Synthesis of (3S)-6-methylazepan-3-amine (137a):
[0907] The title compound was prepared in a method similar to compound 124, using benzyl
(S)-3-(((benzyloxy)carbonyl)amino)-6-oxoazepane-1-carboxylate in place of (7S)-12-(benzyloxy)-1,5,11-trioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(103a), and Pd(OH)
2/C in place of Pd/C.
Synthesis of (4S,7S)-12-hydroxy-4-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyridor[1,2-a][1,4]diazonine-10-carboxamide
(137-1 and 137-2):
[0908] The title compounds were synthesized in a manner similar to compounds
40-1 and
40-2, using (3S)-6-methylazepan-3-amine
(137a) in place of rel-(1R,4S,6R)-2-Azabicyclo[4.2.1]nonan-4-amine
(40f). Chiral separation was carried out prior to benzyl deprotection.
[0909] 137-1: MS
(m/
z) 436.25 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) δ 10.42 (s, 1H), 8.39 (s, 1H), 6.98 - 6.75 (m, 2H), 4.71 - 4.48 (m, 3H), 3.87 (dt,
J = 14.6, 2.4 Hz, 1H), 3.78 (dd, J = 13.2, 10.3 Hz, 1H), 3.62 (dd, J = 14.7, 1.5 Hz,
1H), 3.30 (dd, J = 13.2, 7.1 Hz, 1H), 2.23 - 2.04 (m, 2H), 1.50 (dt, J = 15.2, 4.1
Hz, 1H), 1.20 (dddd, J = 15.6, 13.2, 10.5, 2.7 Hz, 1H), 1.01 (d, J = 6.7 Hz, 3H).
[0910] 137-2: MS
(m/
z) 436.25 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) d 10.38 (s, 1H), 8.38 (s, 1H), 6.86 (d, J = 10.2 Hz, 2H), 4.58 (d, J = 22.0 Hz,
3H), 4.36 (d, J = 12.6 Hz, 2H), 3.92 - 3.53 (m, 4H), 2.65 (s, 2H), 1.82 - 1.37 (m,
3H), 0.99 (dd, J = 18.0, 6.4 Hz, 3H).
Example 135: Preparation of (13S)-11-chloro-4-hydroxy-3,5-dioxo-N-(2,4,6-trifluorobenzyl)-3,5,8,13-tetrahydro-7H-6,13-methanobenzo[g]pyrido[1,2-a][1,4]diazonine-2-carboxamide
(138):
[0911]

Synthesis of (13S)-4-(benzyloxy)-11-bromo-3,5-dioxo-N-(2,4,6-trifluorobenzyl)-3,5,8,13-tetrahydro-7H-6,13-methanobenzo[g]pyrido[1,2-a][1.4]diazonine-2-carboxamide (138a):
[0912] The title compound was prepared in a similar manner to compound
63g, using 8-bromo-2,3,4,5-tetrahydro-1H-benzo[d]azepin-1-amine dihydrochloride
(122d) in place of 2,3,4,5-tetrahydro-1H-benzo[d]azepin-1-amine dihydrobromide
(63f).
Synthesis of (13S)-4-(benzyloxy)-11-chloro-3,5-dioxo-N-(2,4,6-trifluorobenzyl)-3,5,8,13-tetrahydro-7H-6,13-methanobenzo[g]pyrido[1,2-a][1,4]diazonine-2-carboxamide (138b):
[0913] To a microwave tube with a stir bar was added (13S)-4-(benzyloxy)-11-bromo-3,5-dioxo-N-(2,4,6-trifluorobenzyl)-3,5,8,13-tetrahydro-7H-6,13-methanobenzo[g]pyrido[1,2-a][1,4]diazonine-2-carboxamide,
(138a, 0.055 g, 0.086 mmol), Me
4NCl (0.0094 g, 0.086 mmol), L-proline (0.0020 g, 0.017 mmol), and cuprous oxide (0.0012
g, 0.0086 mmol). The tube was sealed, evacuated, and backfilled with Argon twice.
Ethanol (1 mL) was added and the suspension was heated to 100 °C overnight. The reaction
mixture was concentrated and purified by column chromatography (0-100% EtOAc/heptane)
to give an inseparable mixture of (13S)-4-(benzyloxy)-11-bromo-3,5-dioxo-N-(2,4,6-trifluorobenzyl)-3,5,8,13-tetrahydro-7H-6,13-methanobenzo[g]pyrido[1,2-a][1,4]diazonine-2-carboxamide
and (13S)-4-(benzyloxy)-11-chloro-3,5-dioxo-N-(2,4,6-trifluorobenzyl)-3,5,8,13-tetrahydro-7H-6,13-methanobenzo[g]pyrido[1,2-a][1,4]diazonine-2-carboxamide
(138a and
138b), which was used without further purification.
Synthesis of (13S)-11-chloro-4-hydroxy-3,5-dioxo-N-(2,4,6-trifluorobenzyl)-3,5,8,13-tetrahydro-7H-6,13-methanobenzo[g]pyrido[1,2-a][1,4]diazonine-2-carboxamide
(138):
[0914] To a flask containing an inseparable mixture of (13S)-4-(benzyloxy)-11-bromo-3,5-dioxo-N-(2,4,6-trifluorobenzyl)-3,5,8,13-tetrahydro-7H-6,13-methanobenzo[g]pyrido[1,2-a][1,4]diazonine-2-carboxamide
and (13S)-4-(benzyloxy)-11-chloro-3,5-dioxo-N-(2,4,6-trifluorobenzyl)-3,5,8,13-tetrahydro-7H-6,13-methanobenzo[g]pyrido[1,2-a][1,4]diazonine-2-carboxamide
(138a and
138b, 0.0085 g, 0.014 mmol) was added a 1:1 toluene/TFA solution (2 mL). The reaction mixture
was stirred at rt for 3 h. The reaction mixture was concentrated, dissolved in MeCN,
filtered, and purified by preparative HPLC (column, Gemini 10µ C18 110A, AXI/; 250
x 21.2 mm), eluting with 5-100% acetonitrile in water (0.1% TFA) over 30 minutes,
to afford the title compound. MS (
m/
z) 504.14 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.37 (t, J = 5.7 Hz, 1H), 9.07 (s, 1H), 7.40 - 7.18 (m, 5H), 5.98 (s, 1H), 4.61
(qd, J = 14.6, 5.7 Hz, 2H), 4.44 (dd, J = 15.2, 2.8 Hz, 1H), 4.27 (td, J = 12.6, 5.5
Hz, 1H), 4.00 (d, J = 15.1 Hz, 1H), 3.62 - 3.50 (m, 2H), 2.88 (dd, J = 15.4, 5.5 Hz,
1H).
19F NMR (376 MHz, DMSO-d
6) δ - 109.22 (tt, J = 9.6, 6.3 Hz), -112.53 (t, J = 7.3 Hz).
Example 136: Preparation of (6R)-N-(3-chloro-2,4-difluorobenzyl)-9,10-difluoro-1-hydroxy-2,14-dioxo-2,7,12,14-tetrahydro-6H-6,13-methanobenzo[f]pyrido[1,2-a][1,4]diazonine-3-carboxamide
and (6S)-N-(3-chloro-2,4-difluorobenzyl)-9,10-difluoro-1-hydroxy-2,14-dioxo-2,7,12,14-tetrahydro-6H-6,13-methanobenzo[f]pyrido[1,2-a][1,4]diazonine-3-carboxamide
(139-1 and 139-2):
[0915]

[0916] The title compounds were prepared in a similar manner as compounds
127-1 and
127-2, using 6,7-difluoro-3,4-dihydronaphthalen-2(1H)-one in place of 6-chloro-3,4-dihydronaphthalen-2(1H)-one,
and ethyl 3-benzyloxy-5-[(3-chloro-2,4-difluorophenyl)methylcarbamoyl]-4-oxo-pyran-2-carboxylate
in place of methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate.
Chiral separation was carried out using preparative SFC (IB, 45% MeOH containing 0.1%
diethylamine).
[0917] 139-1: MS (m/z) 522.15 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.36 (t, J = 6.0 Hz, 1H), 8.52 (s, 1H), 7.46 - 7.35 (m, 2H), 7.35 - 7.22 (m,
2H), 5.47 (d, J = 16.6 Hz, 1H), 4.99 (td, J = 7.8, 2.3 Hz, 1H), 4.61 (d, J = 6.0 Hz,
2H), 4.44 (d, J = 16.7 Hz, 1H), 3.80 (d, J = 14.7 Hz, 1H), 3.62 (dd, J = 14.8, 2.8
Hz, 1H), 3.35 - 3.35 (m, 1H), 2.87 (dd, J = 15.1, 7.6 Hz, 1H).
19F NMR (376 MHz, DMSO-d
6) δ -115.99 - -116.39 (m), -118.35 (d, J = 8.0 Hz), -141.06 (ddd, J = 22.1, 11.2,
8.2 Hz), -141.91 (dt, J = 21.1, 9.8 Hz).
[0918] 139-2: MS (m/z) 522.13 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.36 (t, J = 6.0 Hz, 1H), 8.52 (s, 1H), 7.47 - 7.34 (m, 2H), 7.34 - 7.22 (m,
2H), 5.47 (d, J = 16.6 Hz, 1H), 4.99 (td, J = 7.5, 2.2 Hz, 1H), 4.61 (d, J = 6.0 Hz,
2H), 4.44 (d, J = 16.7 Hz, 1H), 3.80 (d, J = 14.6 Hz, 1H), 3.62 (dd, J = 14.8, 2.8
Hz, 1H), 3.38 (dd, J = 15.2, 7.3 Hz, 1H), 2.86 (dd, J = 15.0, 7.6 Hz, 1H).
19F NMR (376 MHz, DMSO-d
6) δ -116.19 (td, J = 7.4, 6.2, 2.3 Hz), -118.36 (d, J = 8.1 Hz), -141.05 (ddd, J =
23.3, 11.7, 8.3 Hz), -141.90 (dt, J = 21.0, 9.9 Hz).
Example 137: Preparation of (13S)-10-chloro-N-(2,4-difluorobenzyl)-4-hydroxy-3,5-dioxo-3,5,8,13-tetrahydro-7H-6,13-methanobenzo[g]pyrido[1,2-a][1,4]diazonine-2-carboxamide
and (13R)-10-chloro-N-(2,4-difluorobenzyl)-4-hydroxy-3,5-dioxo-3,5,8,13-tetrahydro-7H-6,13-methanobenzo[g]pyrido[1,2-a][1,4]diazonine-2-carboxamide
(140-1 and 140-2):
[0919]

[0920] The title compounds were prepared in a manner similar to compounds
136-1 and
136-2, using methyl 3-(benzyloxy)-5-((2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate
in place of methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate.
[0921] 140-1: MS
(m/
z) 486.19 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.35 (t, J = 5.9 Hz, 1H), 9.03 (s, 1H), 7.46 (td, J = 8.7, 6.5 Hz, 1H), 7.41
- 7.32 (m, 2H), 7.32 - 7.22 (m, 2H), 7.15 - 7.04 (m, 1H), 6.04 (s, 1H), 4.66 - 4.51
(m, 2H), 4.46 (dd, J = 15.2, 2.7 Hz, 1H), 4.30 (td, J = 12.6, 5.4 Hz, 1H), 4.02 (d,
J = 15.0 Hz, 1H), 3.62 (d, J = 13.3 Hz, 2H), 2.89 (dd, J = 15.3, 5.4 Hz, 1H).
[0922] 140-2: MS (
m/
z) 486.21 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.35 (t, J = 5.9 Hz, 1H), 10.23 (s, 1H), 9.03 (s, 1H), 7.46 (td, J = 8.7, 6.6
Hz, 1H), 7.42 - 7.33 (m, 1H), 7.33 - 7.20 (m, 2H), 7.13 - 7.02 (m, 1H), 6.55 (s, 1H),
6.04 (s, 1H), 4.70 - 4.50 (m, 2H), 4.46 (dd, J = 15.1, 2.7 Hz, 1H), 4.30 (td, J =
12.7, 5.5 Hz, 1H), 4.02 (d, J = 15.0 Hz, 1H), 3.69 - 3.53 (m, 2H), 2.89 (dd, J = 15.3,
5.4 Hz, 1H).
Example 138: Preparation of 12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-5-(trifluoromethyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4,7]triazonine-10-carboxamide
(141):
[0923]

Synthesis of 12-(benzyloxy)-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4,7]triazonine-10-carboxamide
(141a):
[0924] To a solution of 1,4-diazepan-6-amine (82.2 mg, 0.714 mmol) in MeOH (3 mL) and H
2O (0.5 mL), sodium bicarbonate (135 mg, 1.61 mmol) and methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate
(180 mg, 0.402 mmol) were added at rt. The reaction mixture was stirred overnight
at 50 °C, then extracted with ethyl acetate (100 mL). The organic phase was washed
with brine, dried over MgSO
4, and concentrated. The residue was purified by silica-gel column to provide the title
compound (
141a). MS (
m/
z) 513.126 [M+H]
+.
Synthesis of 12-(benzyloxy)-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-5-(trifluoromethyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4,7]triazonine-10-carboxamide
(141b):
[0925] To a solution of 12-(benzyloxy)-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4,7]triazonine-10-carboxamide
(141a, 125 mg, 0.244 mmol) in ACN (5 mL), tetramethylammonium trifluormethylthiolate (70
mg, 0.399 mmol) was added at rt. The reaction mixture was stirred for 30 min, then
AgF (92.8 mg, 0.73 mmol) was added, and the reaction mixture was stirred at 50 °C
for 4 hr. After the reaction was cooled to rt, the reaction mixture was filtered through
Celite
®, and the solvent was removed. The residue was purified by silica-gel column to provide
the title compound (
141b). MS (
m/
z) 581.1 [M+H]
+.
Synthesis of 12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-5-(trifluoromethyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4,7]triazonine-10-carboxamide
(141):
[0926] The title compound was prepared similarly to compound
28, using 12-(benzyloxy)-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-5-(trifluoromethyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4,7]
triazonine-10-carboxamide
(141b) in place of (7S)-12-(benzyloxy)-N-(2,4-difluorobenzyl)-1,11-dioxo-1,3,4,6,7,11-hexahydro-2,7-methanopyrido[1,2-d][1,4,7]oxadiazonine-10-carboxamide
(28a). MS
(m/
z) 491.1 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.33 (dt, J = 6.0, 3.9 Hz, 1H), 8.61 (d, J = 1.8 Hz, 1H), 7.18 (t, J = 8.7 Hz,
2H), 4.78 (s, 1H), 4.56 (t, J = 4.5 Hz, 2H), 4.32 (m, 1H), 4.10 (d, J = 15.6 Hz, 1H),
4.03 - 3.92 (m, 1H), 3.85 (d, J = 14.7 Hz, 2H), 3.59 (d, J = 15.5 Hz, 1H), 3.55 -
3.42 (m, 1H), 3.17 (dd, J = 13.2, 6.2 Hz, 1H).
Example 139: Preparation of (3S,5S,7S)-12-hydroxy-3,5-dimethyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
and (3S,5R,7S)-12-hydroxy-3,5-dimethyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(142-1 and 142-2):
[0927]

[0928] The title compounds were prepared in a manner similar to compounds
108-1 and
108-2, using benzyl (2S,6S)-6-((tert-butoxycarbonyl)amino)-2-methyl-4-oxoazepane-1-carboxylate
in place of benzyl (2S,6S)-6-((tert-butoxycarbonyl)amino)-2-methyl-3-oxoazepane-1-carboxylate.
[0929] 142-1: MS (
m/
z) 450.25 [M+H]
+.
1H NMR (400 MHz, Methanol-d
4) δ 8.47 (s, 1H), 6.92 (t, J = 8.5 Hz, 2H), 4.94 (d, J = 2.5 Hz, 1H), 4.68 (s, 3H),
3.81 (d, J = 17.2 Hz, 2H), 2.04 (d, J = 14.2 Hz, 1H), 1.97 - 1.84 (m, 1H), 1.75 (s,
1H), 1.55 (dd, J = 20.7, 10.0 Hz, 2H), 1.27 (d, J = 6.6 Hz, 3H), 0.96 (d, J = 5.8
Hz, 3H).
[0930] 142-2: MS
(m/
z) 450.24 [M+H]
+.
1H NMR (400 MHz, Methanol-d
4) δ 8.47 (s, 1H), 6.92 (s, 2H), 4.81 (s, 2H), 4.68 (s, 2H), 3.94 (s, 1H), 3.64 (s,
1H), 2.41 (s, 1H), 2.19 (s, 1H), 1.70 (d, J = 5.0 Hz, 2H), 1.41 (s, 1H), 1.35 (d,
J = 6.9 Hz, 3H), 0.94 (d, J = 6.0 Hz, 3H).
Example 140: Preparation of (6R)-N-(3-chloro-2-fluorobenzyl)-9,10-difluoro-1-hydroxy-2,14-dioxo-2,7,12,14-tetrahydro-6H-6,13-methanobenzo[f]pyrido[1,2-a][1,4]diazonine-3-carboxamide
and (6S)-N-(3-chloro-2-fluorobenzyl)-9,10-difluoro-1-hydroxy-2,14-dioxo-2,7,12,14-tetrahydro-6H-6,13-methanobenzo[f]pyrido[1,2-a][1,4]diazonine-3-carboxamide
(143-1 and 143-2):
[0931]

[0932] The title compounds were prepared in a similar manner to compounds
139-1 and
139-2 using methyl 3-(benzyloxy)-5-((3-chloro-2-fluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate
in place of methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate.
Chiral separation was carried out using preparative SFC (IB, 50% EtOH containing 0.1%
TFA).
[0933] 143-1: MS (m/z) 504.16 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.37 (t, J = 6.0 Hz, 1H), 8.53 (s, 1H), 7.50 (td, J = 7.7, 1.7 Hz, 1H), 7.41
(dd, J = 11.7, 8.2 Hz, 1H), 7.37 - 7.24 (m, 2H), 7.20 (td, J = 7.9, 1.0 Hz, 1H), 5.47
(d, J = 16.6 Hz, 1H), 5.00 (td, J = 7.9, 2.2 Hz, 1H), 4.72 - 4.56 (m, 2H), 4.44 (d,
J = 16.7 Hz, 1H), 3.80 (d, J = 14.6 Hz, 1H), 3.62 (dd, J = 14.8, 2.8 Hz, 1H), 3.40
(d, J = 7.3 Hz, 1H), 2.87 (dd, J = 15.0, 7.7 Hz, 1H).
19F NMR (376 MHz, DMSO-d
6) δ -121.99 (t, J = 6.9 Hz), -141.06 (ddd, J = 22.2, 11.1, 8.3 Hz), -141.90 (dt, J
= 21.2, 10.1 Hz).
[0934] 143-2: MS (m/z) 504.14 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.37 (t, J = 6.0 Hz, 1H), 8.53 (s, 1H), 7.50 (td, J = 7.7, 1.7 Hz, 1H), 7.41
(dd, J = 11.7, 8.2 Hz, 1H), 7.38 - 7.23 (m, 2H), 7.20 (td, J = 7.9, 1.1 Hz, 1H), 5.47
(d, J = 16.6 Hz, 1H), 5.00 (dt, J = 8.3, 4.1 Hz, 1H), 4.63 (d, J = 6.0 Hz, 2H), 4.44
(d, J = 16.7 Hz, 1H), 3.80 (d, J = 14.6 Hz, 1H), 3.62 (dd, J = 14.7, 2.8 Hz, 1H),
3.36 (d, J = 7.6 Hz, 1H), 2.87 (dd, J = 15.1, 7.6 Hz, 1H).
19F NMR (376 MHz, DMSO-d
6) δ -121.99 (t, J = 7.1 Hz), -141.06 (ddd, J = 23.0, 11.6, 8.1 Hz), -141.91 (dt, J
= 20.8, 9.8 Hz).
Example 141: Preparation of (3S,7S)-4-fluoro-12-hydroxy-3,4-dimethyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
and (3S,7S)-12-hydroxy-3,4-dimethyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(144-1 and 144-2):
[0935]

Synthesis of (2S,6S)-6-amino-2-methylazepan-3-one (144a):
[0936] To a solution of benzyl (2S,6S)-6-((tert-butoxycarbonyl)amino)-2-methyl-3-oxoazepane-1-carboxylate
(130 mg) in ethanol (20 mL) and ethyl acetate (20 mL), was added 10% Pd(OH)
2/ C (40 mg). The mixture was evacuated several times and a H
2 balloon was applied. The reaction was stirred at r.t. overnight, filtered through
Celite
®, and concentrated, to give tert-butyl ((3S,7S)-7-methyl-6-oxoazepan-3-yl)carbamate,
which was used subsequently without further purification.
[0937] TFA (1 mL) was added to tert-butyl ((3S,7S)-7-methyl-6-oxoazepan-3-yl)carbamate in
DCM (3 mL). The reaction was stirred at r.t. for 2 hours. The reaction was concentrated
to give the title compound
(144a), which was used subsequently without further purification.
Synthesis of (3S,7S)-12-(benzyloxy)-3-methyl-1,4,11-trioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(144b):
[0938] NaHCO
3 (320 mg, 5.2 mmol) was added to a solution of methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate
(72 mg, 0.52 mmol) and (2S,6S)-6-amino-2-methylazepan-3-one
(144a) in methanol (20 mL), and the reaction was stirred at rt overnight. The reaction mixture
was concentrated, diluted with ethyl acetate, and washed with saturated ammonium chloride.
The organic layer was concentrated, and purified via silica gel chromatography
(144b) to give the title compound. MS (
m/
z) 540.09 [M+H]
+.
Synthesis of (3S,7S)-4-fluoro-12-hydroxy-3,4-dimethyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
and (3S,7S)-12-hydroxy-3,4-dimethyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(144-1 and 144-2):
[0939] The title compounds were prepared in a similar manner to compounds
132-1, 132-2 and
132-3, using (3S,7S)-12-(benzyloxy)-3-methyl-1,4,11-trioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(144b) in place of (7S)-12-(benzyloxy)-1,4,11-trioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(79a), and isolating
144-1 as a mixture of stereoisomers.
[0940] 144-1: MS (
m/
z) 468.21 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.40 (t, J = 5.8 Hz, 1H), 8.49 (s, 1H), 7.30 - 7.17 (m, 2H), 4.81 (s, 1H), 4.64
- 4.39 (m, 3H), 3.78 - 3.58 (m, 3H), 2.17 (d, J = 15.8 Hz, 1H), 2.02 - 1.84 (m, 2H),
1.55 (dt, J = 32.2, 14.0 Hz, 2H), 1.37 (d, J = 22.4 Hz, 3H), 1.28 (dd, J = 7.0, 2.0
Hz, 3H).
[0941] 144-2: MS (
m/
z) 448.21 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) δ 10.40 (d, J = 21.2 Hz, 1H), 8.39 (d, J = 7.7 Hz, 1H), 6.95 - 6.79 (m, 2H), 5.35
- 4.93 (m, 2H), 4.69 - 4.48 (m, 2H), 3.89 - 3.60 (m, 2H), 3.38 (dd, J = 14.6, 1.6
Hz, 1H), 2.91 (dt, J = 17.5, 8.5 Hz, 1H), 2.47 - 2.27 (m, 2H), 2.21 - 2.07 (m, 1H),
1.93 - 1.85 (m, 1H), 1.73 (d, J = 2.4 Hz, 1H), 1.39 (dd, J = 10.2, 6.9 Hz, 3H).
Example 142: Preparation of (6S)-10-fluoro-1-hydroxy-2,14-dioxo-N-(2,4,6-trifluorobenzyl)-2,7,12,14-tetrahydro-6H-6,13-methanobenzo[f]pyrido[1,2-a][1,4]diazonine-3-carboxamide
(145):
[0942]

Synthesis of (S)-2-((tert-butoxycarbonyl)amino)-3-(2-cyano-4-fluorophenyl)propanoic
acid (145a):
[0943] A solution of methyl (S)-2-amino-3-(2-cyano-4-fluorophenyl)propanoate (1 g, 4.5 mmol),
di-tert-butyl dicarbonate (1.47 g, 6.75 mmol), trimethylamine (1.9 mL, 13.5 mmol)
in THF (10 mL) was stirred at rt for 1 days. To the mixture was added DCM (10 mL)
and the reaction mixture was stirred at rt overnight. Then to the mixture was added
DMAP (100 mg, 0.82 mmol) and the reaction mixture was stirred at rt for 2 days. The
reaction mixture was diluted with DCM, washed with sat. NaHCO
3, and extracted with DCM. The organic phase was separated, dried over MgSO
4, filtered, concentrated down and the residue purified by silica gel column chromatography,
eluting with EtOAc/hexane (0-100%), to give methyl (S)-2-((tert-butoxycarbonyl)amino)-3-(2-cyano-4-fluorophenyl)propanoate.
[0944] A mixture of methyl (S)-2-((tert-butoxycarbonyl)amino)-3-(2-cyano-4-fluorophenyl)propanoate
(1.15 g, 3.57 mmol) in 2 N NaOH (3.5 mL, 7.0 mmol) and MeOH (10 mL) was stirred at
rt for 3 h. The reaction mixture was concentrated down, and the residue dissolved
in DCM, and purified by silica gel column chromatography, eluting with 0-100% EtOAc/hexane
then 0-20% MeOH/DCM, to give the title compound
(145a).
Synthesis of (6S)-10-fluoro-1-hydroxy-2,14-dioxo-N-(2,4,6-trifluorobenzyl)-2,7,12,14-tetrahydro-6H-6,13-methanobenzo[f]pyrido[1,2-a][1,4]diazonine-3-carboxamide
(145):
[0945] The title compound was prepared in a similar manner to compound
70, using (S)-2-((tert-butoxycarbonyl)amino)-3-(2-cyano-4-fluorophenyl)propanoic acid
(145a) in place of (S)-2-((tert-butoxycarbonyl)amino)-3-(2-cyanophenyl)propanoic acid. MS
(
m/
z) 488.17 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.37 (t, J = 5.8 Hz, 1H), 8.53 (s, 1H), 7.29 - 7.12 (m, 4H), 7.06 (td, J = 8.4,
2.8 Hz, 1H), 5.52 (d, J = 16.7 Hz, 1H), 4.98 (td, J = 7.7, 2.4 Hz, 1H), 4.58 (d, J
= 5.9 Hz, 2H), 4.46 (d, J = 16.8 Hz, 1H), 3.79 (d, J = 14.6 Hz, 1H), 3.58 (dd, J =
14.7, 2.9 Hz, 1H), 3.37 (s, 2H), 2.83 (dd, J = 15.0, 7.7 Hz, 1H).
Example 143: Preparation of (6S)-N-(2,4-difluorobenzyl)-10-fluoro-1-hydroxy-2,14-dioxo-2,7,12,14-tetrahydro-6H-6,13-methanobenzo[f]pyrido[1,2-a][1,4]diazonine-3-carboxamide
(146):
[0946]

[0947] The title compound was prepared in a manner similar to compound
145, using methyl 3-(benzyloxy)-5-((2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate
in place of methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate.
MS (
m/
z) 470.19 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.33 (t, J = 5.9 Hz, 1H), 10.26 (s, 1H), 8.56 (s, 1H), 7.42 (td, J = 8.6, 6.6
Hz, 1H), 7.30 - 7.15 (m, 2H), 7.07 (tt, J = 8.4, 3.5 Hz, 2H), 5.53 (d, J = 16.7 Hz,
1H), 5.00 (t, J = 7.3 Hz, 1H), 4.57 (d, J = 5.9 Hz, 2H), 4.47 (d, J = 16.9 Hz, 1H),
3.80 (d, J = 14.6 Hz, 1H), 3.58 (dd, J = 14.8, 2.8 Hz, 1H), 3.41 (dd, J = 15.1, 7.4
Hz, 1H), 3.31 (s, 1H), 2.84 (dd, J = 15.0, 7.7 Hz, 1H).
Example 144: Preparation of (13S)-11-fluoro-4-hydroxy-3,5-dioxo-N-(2,4,6-trifluorobenzyl)-3,5,8,13-tetrahydro-7H-6,13-methanobenzo[g]pyrido[1,2-a][1,4]diazonine-2-carboxamide
(147):
[0948]

Synthesis of (13S)-4-(benzyloxy)-3,5-dioxo-11-(tributylstannyl)-N-(2,4,6-tnfluorobenzyl)-3,5,8,13-tetrahydro-7H-6,13-methanobenzo[g]pyrido[1,2-a][1,4]diazonine-2-carboxamide
(147a):
[0949] To a suspension of (13S)-4-(benzyloxy)-11-bromo-3,5-dioxo-N-(2,4,6-trifluorobenzyl)-3,5,8,13-tetrahydro-7H-6,13-methanobenzo[g]pyrido[1,2-a][1,4]diazonine-2-carboxamide
(
138a, 0.030 g, 0.047 mmol) and Pd(PPh
3)
4 (0.0027 g, 0.0024 mmol) in toluene (0.5 mL) under Ar (g) in a sealed microwave tube,
was added hexabutylditin (0.054 g, 0.094 mmol). The reaction mixture was heated to
100 °C overnight. The reaction mixture was concentrated and purified by column chromatography
(0-20% EtOAc/heptane, then 100% EtOAc) to afford the title compound (
147a). MS (m/z) 848.10 [M+H]
+.
Synthesis of (13S)-4-(benzyloxy)-11-fluoro-3,5-dioxo-N-(2,4,6-trifluorobenzyl)-3,5,8,13-tetrahydro-7H-6,13-methanobenzo[g]pyrido[1,2-a][1,4]diazonine-2-carboxamide
(147b):
[0950] To a solution of (13S)-4-(benzyloxy)-3,5-dioxo-11-(tributylstannyl)-N-(2,4,6-trifluorobenzyl)-3,5,8,13-tetrahydro-7H-6,13-methanobenzo[g]pyrido[1,2-a][1,4]diazonine-2-carboxamide
(147a, 0.026 g, 0.031 mmol) in acetone (1 mL) at rt was added silver triflate (0.016 g,
0.062 mmol) and SelectFluor (0.013 g, 0.037 mmol). After 20 min, the reaction mixture
was concentrated and purified by column chromatography (0-70% EtOAc/heptane) to afford
the title compound
(147b). MS (m/z) 578.15 [M+H]
+.
Synthesis of (13S)-11-fluoro-4-hydroxy-3,5-dioxo-N-(2,4,6-trifluorobenzyl)-3,5,8,13-tetrahydro-7H-6,13-methanobenzo[g]pyrido[1,2-a][1,4]diazonine-2-carboxamide
(147):
[0951] To a flask containing (13S)-4-(benzyloxy)-11-fluoro-3,5-dioxo-N-(2,4,6-trifluorobenzyl)-3,5,8,13-tetrahydro-7H-6,13-methanobenzo[g]pyrido[1,2-a][1,4]diazonine-2-carboxamide
(147b, 0.013 g, 0.022 mmol) was added a 1:1 toluene/TFA solution (4 mL). The reaction mixture
was stirred at rt for 4 h. The reaction mixture was concentrated, dissolved in MeCN,
filtered, and purified by preparative HPLC (column, Gemini 10µ C18 110A, AXI/; 250
x 21.2 mm), eluting with 5-100% acetonitrile (0.1% TFA) in water (0.1% TFA) over 30
minutes, to afford the title compound
(147). MS (m/z) 488.16 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.37 (t, J = 5.9 Hz, 1H), 9.05 (s, 1H), 7.32 (dd, J = 8.6, 6.1 Hz, 1H), 7.25
(d, J = 8.3 Hz, 2H), 7.14 (td, J = 8.2, 2.7 Hz, 1H), 7.03 (dd, J = 10.3, 2.8 Hz, 1H),
6.01 (d, J = 20.4 Hz, 1H), 4.68 - 4.54 (m, 2H), 4.46 (dd, J = 15.2, 2.8 Hz, 1H), 4.37
- 4.19 (m, 1H), 4.00 (d, J = 15.0 Hz, 1H), 3.62 - 3.48 (m, 1H), 3.45 (s, 1H), 2.89
(dd, J = 15.3, 5.4 Hz, 1H).
19F NMR (376 MHz, DMSO-d
6) δ -109.25 (ddt, J = 11.7, 6.3, 2.5 Hz), -112.53 (t, J = 7.7 Hz), -115.54 (q, J =
8.4, 7.9 Hz).
Example 145: Preparation of (3S,7S)-12-hydroxy-3-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(148):
[0952]

Synthesis of (3S,7S)-7-methyl-2,3,4,7-tetrahydro-1H-azepin-3-amine •2TFA (148a):
[0953] A solution of benzyl (3S,7S)-3-(((benzyloxy)carbonyl)amino)-7-methyl-2,3,4,7-tetrahydro-1H-azepine-1-carboxylate
(0.200 g, 0.507 mmol) in TFA (5 mL) was heated to 100 °C in a sealed vial for 2 h.
The solution was concentrated to afford (3S,7S)-7-methyl-2,3,4,7-tetrahydro-1H-azepin-3-amine
•2TFA, which was used in the next step without further purification. MS (m/z) 126.95
[M+H]
+.
Synthesis of (3S,7S)-12-hydroxy-3-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(148):
[0954] The title compound was prepared similarly to compound
28 using (3S,7S)-7-methyl-2,3,4,7-tetrahydro-1H-azepin-3-amine •2TFA
(148a) in place of 1,4-oxazepan-6-amine, and methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate
in place of methyl 3-(benzyloxy)-5-((2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate.
MS (
m/
z) 434.23 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.38 (t, J = 5.8 Hz, 1H), 8.48 (s, 1H), 7.28 - 7.11 (m, 2H), 5.59 - 5.38 (m,
2H), 5.33 - 5.16 (m, 1H), 4.95 (t, J = 7.1 Hz, 1H), 4.56 (d, J = 5.8 Hz, 2H), 3.78
(dd, J = 14.4, 2.7 Hz, 1H), 3.61 (d, J = 14.1 Hz, 1H), 2.89 (dt, J = 17.3, 8.5 Hz,
1H), 2.29 - 2.15 (m, 1H), 1.26 (d, J = 7.2 Hz, 3H).
19F NMR (376 MHz, DMSO-d
6) δ -109.28 (tt, J = 9.3, 6.2 Hz), -112.55 (t, J = 7.3 Hz).
Example 146: Preparation of (3S,7S)-N-(2,4-difluorobenzyl)-12-hydroxy-3-methyl-1,11-dioxo-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(149):
[0955]

[0956] The title compound was prepared similarly to compound
148 using methyl 3-(benzyloxy)-5-((2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate
in place of methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate.
MS (
m/
z) 416.24 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.36 (t, J = 5.9 Hz, 1H), 8.51 (s, 1H), 7.40 (td, J = 8.6, 6.6 Hz, 1H), 7.24
(ddd, J = 10.5, 9.3, 2.6 Hz, 1H), 7.06 (ddd, J = 10.7, 8.2, 2.5 Hz, 1H), 5.52 (ddt,
J = 10.3, 7.6, 2.7 Hz, 1H), 5.46 (dt, J = 11.6, 2.2 Hz, 1H), 5.31 - 5.20 (m, 1H),
5.02 - 4.92 (m, 1H), 4.55 (d, J = 5.8 Hz, 2H), 3.79 (dd, J = 14.4, 2.8 Hz, 1H), 3.63
(d, J = 14.2 Hz, 1H), 2.90 (dt, J = 17.3, 8.5 Hz, 1H), 2.30 - 2.16 (m, 1H), 1.26 (d,
J = 7.2 Hz, 3H).
19F NMR (376 MHz, DMSO-d
6) δ -112.38 (p, J = 7.8 Hz), -114.98 (q, J = 8.4 Hz).
Example 147: Preparation of (1aS,4R,11aS)-7-hydroxy-4-methyl-6,8-dioxo-N-(2,4,6-trifluorobenzyl)-1a,2,3,4,6,8-hexahydro-1H-5,11a-methanocyclopropa[h]pyrido[1,2-a][1,4]diazonine-9-carboxamide
(150):
[0957]

Synthesis of benzyl (1R,4R,7S)-1-((tert-butoxycarbonyl)amino)-4-methyl-3-azabicyclo[5.1.0]oct-5-ene-3-carboxylate (150a):
[0958] The title compound was prepared in a similar manner to compound
65c, using (R)-but-3-en-2-amine in place of allylamine, and benzyl chloroformate and potassium
carbonate for Cbz protection in place of di-tert-butyl dicarbonate and trimethylamine
for Boc protection. MS (
m/
z) 372.77 [M+H]
+.
Synthesis of benzyl (1R,4R,7R)-1-((tert-butoxycarbonyl)amino)-4-methyl-3-azabicyclo[5.1.0] octane-3-carboxylate
(150b):
[0959] A mixture of benzyl (
1R,4R,7S)-1-((
tert-butoxycarbonyl)amino)-4-methyl-3-azabicyclo[5.1.0] oct-5-ene-3-carboxylate
(150a, 171.6 mg, 0.461 mmol),
p-toluenesulfonhydrazide (646.6 mg, 3.47 mmol), and sodium acetate (569.1 mg, 6.94 mmol)
in 1,2-dimethoxyethane (7.5 mL) and water (0.75 mL) was stirred at 95 °C for 17 h.
Additional
p-toluenesulfonhydrazide (646.1 mg, 3.47 mmol), sodium acetate (569.5 mg, 6.94 mmol),
1,2-dimethoxyethane (7.5 mL), and water (0.75 mL) were added, before the resulting
mixture was stirred at reflux at 95 °C bath for 5 h. The reaction mixture was concentrated
to remove most of DME and the residue was dissolved in water (30 mL), and extracted
with ethyl acetate (2 x 30 mL). The extracts were washed with water (30 mL), dried
over MgSO
4, and concentrated. The crude residue was subjected to the same condition with
p-toluenesulfonhydrazide (1746 mg, 9.38 mmol), sodium acetate (1548 mg, 18.9 mmol),
1,2-dimethoxyethane (20 mL), and water (2 mL) twice and then extracted as described
above. The residue was purified by column chromatography on silica gel, eluting with
5-30% ethyl acetate in hexane, to get the title compound (
150b). MS (
m/
z) 374.83 [M+H]
+.
Synthesis of (1aS,4R,11aS)-7-hydroxy-4-methyl-6,8-dioxo-N-(2,4,6-trifluorobenzyl)-1a,2,3,4,6,8-hexahydro-1H-5,11a-methanocyclopropa[h]pyrido[1,2-a][1,4]diazonine-9-carboxamide
(150):
[0960] The title compound was prepared in a manner similar to compound
65-2, using benzyl (
1R,
4R,
7R)-1-((tert-butoxycarbonyl)amino)-4-methyl-3-azabicyclo[5.1.0]octane-3-carboxylate
(150b) in place of benzyl (
1S,7R)-1-(((benzyloxy)carbonyl)amino)-3-azabicyclo[5.1.0]oct-5-ene-3-carboxylate
(65d-2). MS (
m/
z) 448.19 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) δ 10.27 (s, 1H), 8.16 (s, 1H), 6.89 - 6.76 (m, 2H), 4.63 - 4.51 (m, 3H), 4.08 (dd,
J = 15.0, 1.4 Hz, 1H), 3.42 (dqd, J = 11.2, 7.1, 2.6 Hz, 1H), 3.16 (d, J = 14.9 Hz,
1H), 2.39 - 2.28 (m, 1H), 2.28 - 2.16 (m, 1H), 1.91 - 1.81 (m, 1H), 1.79 - 1.71 (m,
1H), 1.69 (d, J = 7.1 Hz, 3H), 1.38 - 1.20 (m, 3H).
19F NMR (376 MHz, Acetonitrile-d
3) δ -77.36, -111.13 (tt, J = 9.0, 6.2 Hz), -113.89 (t, J = 7.0 Hz).
Example 148: Preparation of (3R,6S,7R)- and (3R,6R,7S)-12-hydroxy-3,6-dimethyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(151-1 and 151-2):
[0961]

Synthesis of benzyl rac-((2S,3R)-1-hydroxy-3-methylpent-4-en-2-yl)carbamate (151a):
[0962] A solution of the racemic (
2S,3R)-2-(benzyloxycarbonylamino)-3-methyl-pent-4-enoic acid (2.0 g, 7.60 mmol) and 4-methylmorpholine
(1 mL, 9.20 mmol) in tetrahydrofuran (20 mL) was stirred at ice-salt bath as isobutyl
chloroformate (1.2 mL, 9.10 mmol) was added dropwise. After 30 min, the reaction mixture
was filtered, and the solids were washed with tetrahydrofuran (10 mL).
[0963] The filtrate was stirred in an ice-salt bath as a solution of sodium borohydride
in water (4 mL) was added dropwise. The reaction mixture was further diluted with
water (16 mL) and the resulting reaction mixture was stirred at rt overnight. The
reaction mixture was diluted with saturated ammonium chloride solution (50 mL) and
water (50 mL) before the product was extracted with ethyl acetate (100 mL x 2). The
extracts were washed with brine (100 mL), and the organic fractions were combined,
dried over MgSO
4, and concentrated. The residue was purified by column chromatography on silica gel,
eluting with 15-55% ethyl acetate in hexane, to get the title compound
(151a). MS (
m/
z) 249.81 [M+H]
+.
Synthesis of benzyl (3R,4S,7R) and (3S,4R,7R)-3-(((benzyloxy)carbonyl)amino)-4,7-dimethyl-2,3,4,7-tetrahydro-1H-azepine-1-carboxylate
(151b-1 and 151b-2):
[0964] A mixture of the title compounds were prepared analogously to compound
129d, using benzyl rac-((2S,3R)-1-hydroxy-3-methylpent-4-en-2-yl)carbamate
(151a) in place of
tert-butyl (
S)-(1-hydroxypent-4-en-2-yl)carbamate
(129b) and (R)-but-3-en-2-amine in place of 1-vinylcyclopropanamine; hydrochloride
(129a). Two diastereomers were separated by column chromatography on silica gel eluting with
0-30% ethyl acetate in hexane to obtain the title compounds as separated stereoisomers.
151b-1: MS (
m/
z) 409.00 [M+H]
+;
151b-2: MS
(m/
z) 409.03 [M+H]
+.
Synthesis of (3R,6S,7R)- and (3R,6R,7S)-12-hydroxy-3,6-dimethyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(151-1 and 151-2):
[0965] The title compounds were prepared in a manner similar to compounds
65-1 and
65-2 using benzyl (
3R,4S,7R)-3-(((benzyloxy)carbonyl)amino)-4,7-dimethyl-2,3,4,7-tetrahydro-1H-azepine-1-carboxylate
or (
3S,4R,7R)-3-(((benzyloxy)carbonyl)amino)-4,7-dimethyl-2,3,4,7-tetrahydro-1H-azepine-1-carboxylate
(
151b-1 or
151b-2) in place of benzyl (
1R,7S)-1-(((benzyloxy)carbonyl)amino)-3-azabicyclo[5.1.0]oct-5-ene-3-carboxylate or (
1S,7R)-1-(((benzyloxy)carbonyl)amino)-3-azabicyclo[5.1.0]oct-5-ene-3-carboxylate (
65d-1 or
65d-2).
[0966] 151-1: MS (
m/
z) 450.23.19 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) δ 10.35 (s, 1H), 8.44 (s, 1H), 6.92 - 6.75 (m, 2H), 4.59 (d, J = 5.6 Hz, 2H), 4.50
(dp, J = 10.3, 6.8 Hz, 1H), 4.18 (d, J = 3.0 Hz, 1H), 3.65 - 3.48 (m, 2H), 2.18 (d,
J = 8.3 Hz, 1H), 1.85 (dt, J = 14.4, 7.0 Hz, 1H), 1.63 - 1.46 (m, 2H), 1.38 - 1.26
(m, 1H), 1.22 (d, J = 6.7 Hz, 3H), 1.12 (d, J = 7.4 Hz, 3H).
19F NMR (376 MHz, Acetonitrile-d
3) δ -77.34, -111.13 (tt, J = 9.4, 6.3 Hz), -113.84 (t, J = 7.2 Hz).
[0967] 151-2: MS
(m/
z) 450.23.19 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) δ 10.35 (s, 1H), 8.44 (s, 1H), 6.92 - 6.75 (m, 2H), 4.59 (d, J = 5.6 Hz, 2H), 4.50
(dp, J = 10.3, 6.8 Hz, 1H), 4.18 (d, J = 3.0 Hz, 1H), 3.65 - 3.48 (m, 2H), 2.18 (d,
J = 8.3 Hz, 1H), 1.85 (dt, J = 14.4, 7.0 Hz, 1H), 1.63 - 1.46 (m, 2H), 1.38 - 1.26
(m, 1H), 1.22 (d, J = 6.7 Hz, 3H), 1.12 (d, J = 7.4 Hz, 3H).
19F NMR (376 MHz, Acetonitrile-d
3) δ -77.34, -111.13 (tt, J = 9.4, 6.3 Hz), -113.84 (t, J = 7.2 Hz).
Example 149: Preparation of (7S)-N-(2-chloro-4-fluoro-benzyl)-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(152):
[0968]

[0969] The title compound was prepared in a manner similar to compound
51, using (2-chloro-4-fluoro-phenyl) methanamine in place of (3-chloro-2,4-difluorophenyl)methanamine.
MS
(m/
z) 420.21 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.48 (t, J = 6.0 Hz, 1H), 8.50 (s, 1H), 7.48 (dd, J = 8.8, 2.6 Hz, 1H), 7.42
(dd, J = 8.6, 6.2 Hz, 1H), 7.22 (td, J = 8.5, 2.6 Hz, 1H), 4.79 - 4.76 (m, 1H), 4.58
(d, J = 6.0 Hz, 2H), 4.14 (dt, J = 13.2, 7.8 Hz, 1H), 3.95 - 3.84 (m, 1H), 3.68 (dd,
J = 14.6, 1.9 Hz, 1H), 3.08 (ddd, J = 13.1, 6.8, 3.6 Hz, 1H), 2.09 - 1.95 (m, 1H),
1.93 - 1.74 (m, 3H), 1.71 - 1.59 (m, 1H), 1.15 (q, J = 12.0 Hz, 1H).
Example 150: Preparation of (7S)-N-(2,4-dichlorobenzyl)-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(153):
[0970]

[0971] The title compound was prepared analogously to compound
51, using (2,4-di-chlorophenyl)methanamine in place of (3-chloro-2,4-difluorophenyl)methanamine.
MS (
m/
z) 436.18 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.50 (t, J = 6.0 Hz, 1H), 8.50 (s, 1H), 7.65 (d, J = 2.1 Hz, 1H), 7.43 (dd, J
= 8.3, 2.1 Hz, 1H), 7.37 (d, J = 8.3 Hz, 1H), 4.78 (s, 1H), 4.59 (d, J = 6.0 Hz, 2H),
4.15 (dt, J = 15.0, 7.7 Hz, 1H), 3.89 (d, J = 14.4 Hz, 2H), 3.14 - 3.01 (m, 1H), 2.07
- 1.95 (m, 1H), 1.91 - 1.77 (m, 3H), 1.71 - 1.60 (m, 1H), 1.22 - 1.09 (m, 1H).
Example 151: Preparation of (3S,7S)-4-fluoro-12-hydroxy-3-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
and (3S,7S)-4,4-difluoro-12-hydroxy-3-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(154-1 and 154-2):
[0972]

[0973] The title compounds were prepared in a manner similar to compounds
118-2 and
113, using (3S,7S)-12-(benzyloxy)-3-methyl-1,4,11-trioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(144b) in place of (3S,7S)-12-(benzyloxy)-3-methyl-1,5,11-trioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide.
[0974] 154-1: MS (
m/
z) 452.22 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) δ 8.41 (d, J = 4.5 Hz, 1H), 6.97 - 6.77 (m, 2H), 5.45 (s, 1H), 5.38 - 5.23 (m, 1H),
4.81 (d, J = 9.5 Hz, 1H), 4.62 (d, J = 5.8 Hz, 1H), 3.89 (dd, J = 14.5, 2.7 Hz, 1H),
3.73 (d, J = 14.5 Hz, 1H), 2.93 (dt, J = 18.0, 8.8 Hz, 2H), 2.11 (s, 2H), 1.44 (dd,
J = 7.1, 1.7 Hz, 3H).
[0975] 154-2: MS (
m/
z) 472.25 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) δ 10.31 (s, 1H), 8.44 (s, 1H), 6.98 - 6.80 (m, 2H), 4.93 - 4.79 (m, 1H), 4.62 (d,
J = 5.6 Hz, 3H), 3.80 - 3.57 (m, 4H), 2.38 - 2.23 (m, 1H), 2.23 - 2.02 (m, 3H), 1.38
(dd, J = 7.0, 2.0 Hz, 3H).
Example 152: Preparation of (7S)-12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,3,4,6,7,11-hexahydro-2,7-methanopyrido[1,2-d][1,4,7]thiadiazonine-10-carboxamide
and (7R)-12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,3,4,6,7,11-hexahydro-2,7-methanopyrido[1,2-d][1,4,7]thiadiazonine-10-carboxamide
(155-1 and 155-2):
[0976]

[0977] The title compounds were prepared similarly to compound
70, using tert-butyl (1,4-thiazepan-6-yl)carbamate in place of tert-butyl (S)-(2,3,4,5-tetrahydro-1H-benzo[c]azepin-4-yl)carbamate
(70c), and isolated as a mixture of stereoisomers. The stereoisomers were separated following
benzyl deprotection (SFC chromatography on IB 4.6x100 mm 5 mic eluting with 45% EtOH-TFA,
3 mL/min flow rate, 100 bar, 40 °C, 5 uL). MS
(m/
z) 440.1 [M+H]
+.
[0978] 155-1: 1H NMR (400 MHz, Chloroform-d) δ 10.45 (s, 1H), 8.50 (s, 1H), 6.79 - 6.62 (m, 2H),
4.77 - 4.55 (m, 4H), 4.08 (dd, J = 14.5, 2.5 Hz, 1H), 3.78 (d, J = 14.6 Hz, 1H), 3.37
- 3.11 (m, 3H), 2.90 (ddd, J = 14.5, 8.1, 5.7 Hz, 2H).
[0979] 155-2: 1H NMR (400 MHz, Chloroform-d) δ 10.45 (s, 1H), 8.50 (s, 1H), 6.79 - 6.62 (m, 2H),
4.77 - 4.55 (m, 4H), 4.08 (dd, J = 14.5, 2.5 Hz, 1H), 3.78 (d, J = 14.6 Hz, 1H), 3.37
- 3.11 (m, 3H), 2.90 (ddd, J = 14.5, 8.1, 5.7 Hz, 2H).
Example 153: Preparation of (7S)-12-hydroxy-7-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(156):
[0980]

[0981] The title compound was prepared in a manner similar to compound
148, using tert-butyl (3S)-3-(benzyloxycarbonylamino)-3-methyl-4,7-dihydro-2H-azepine-1-carboxylate
in place of benzyl (3S,7S)-3-(((benzyloxy)carbonyl)amino)-7-methyl-2,3,4,7-tetrahydro-1H-azepine-1-carboxylate.
MS (
m/
z) 434.20 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.41 (t, J = 5.8 Hz, 1H), 8.35 (s, 1H), 7.21 (ddd, J = 11.7, 8.7, 3.1 Hz, 2H),
5.73 - 5.57 (m, 2H), 4.94 - 4.82 (m, 1H), 4.57 (d, J = 5.8 Hz, 2H), 3.80 - 3.66 (m,
2H), 3.58 (d, J = 14.3 Hz, 1H), 2.59 - 2.52 (m, 1H), 2.43 (d, J = 16.3 Hz, 1H), 1.67
(s, 3H).
Example 154: Preparation of (3S,6S,7R)-6-fluoro-12-hydroxy-3-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(157):
[0982]

Synthesis of benzyl (3R,7S)-3-(((benzyloxy)carbonyl)amino)-4-hydroxy-7-methyl-2,3,4,7-tetrahydro-1H-azepine-1-carboxylate
(157a):
[0983] To a solution of benzyl (3S,7S)-3-(benzyloxycarbonylamino)-7-methyl-2,3,4,7-tetrahydroazepine-1-carboxylate
(1.06 g, 2.68 mmol) in benzene (28 mL) at rt, was added Celite (1.058 g). To the stirred
mixture was added pyridinium dichromate (4.036 g, 10.7 mmol) followed by tert-butyl
hydroperoxide (1.03 mL, 10.7 mmol). The resulting mixture was stirred at rt overnight.
The reaction was then filtered through a pad of Celite, the filter cake rinsed with
EtOAc, and the filtrate was mixed with 1 N sodium thiosulfate and stirred vigorously
for 1 hr. The layers were separated, and the organic layer washed with brine, dried
over sodium sulfate, filtered, mixed with silica gel, concentrated to dryness, and
purified by normal phase chromatography (24 g silica gel, 0-70% EtOAc/Hexanes, dry
loading) to give benzyl (3R,7S)-3-(((benzyloxy)carbonyl)amino)-7-methyl-4-oxo-2,3,4,7-tetrahydro-1H-azepine-1-carboxylate.
MS (
m/
z) 408.86 [M+H]
+.
[0984] Benzyl (3R,7S)-3-(((benzyloxy)carbonyl)amino)-7-methyl-4-oxo-2,3,4,7-tetrahydro-1H-azepine-1-carboxylate
was dissolved in EtOH (10.0 mL) at 0 °C. Sodium borohydride (97.7 mg, 2.58 mmol) was
added, and the mixture was removed from cooling bath and stirred at rt for 1 hr. The
reaction was cooled back to 0 °C, and quenched with saturated ammonium chloride dropwise.
The mixture was then concentrated to remove EtOH, partitioned between EtOAc (50.0
mL) and water (20.0 mL), and the organic layer was washed with brine, dried over sodium
sulfate, filtered and concentrated to give the title compound
(157a). MS (
m/
z) 410.89 [M+H]
+.
Synthesis of (3R,7S)-3-amino-7-methylazepan-4-ol (157b):
[0985] Benzyl (3R,7S)-3-(((benzyloxy)carbonyl)amino)-4-hydroxy-7-methyl-2,3,4,7-tetrahydro-1H-azepine-1-carboxylate
(157a, 500mg, 1.22 mmol) was dissolved in EtOH (10.0 mL) at rt, and 20% Pd(OH)
2/C (50wt% water, 90.0 mg) was added. The resulting mixture was degassed and flushed
with nitrogen three times, then degassed and flushed with hydrogen three times, before
it was hydrogenated under hydrogen balloon overnight. The reaction was filtered through
Celite, filter cake rinsed with EtOH, and the filtrate concentrated to give the title
compound (157b), which was carried forward without further purification. MS (
m/
z) 145.07 [M+H]
+.
Synthesis of (3S,6R,7R)-12-(benzyloxy)-6-hydroxy-3-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(157c):
[0986] (3R,7S)-3-amino-7-methylazepan-4-ol
(157b, 156 mg, 1.08 mmol) and methyl 3-benzyloxy-4-oxo-5-[(2,4,6-trifluorophenyl)methylcarbamoyl]pyran-2-carboxylate
(484mg, 1.08 mmol) was treated with a mixture of MeOH (10.0 mL) and water (2.0 mL)
at room temperature. Sodium bicarbonate (182mg, 2.16 mmol) was added, and the resulting
mixture was heated at 50 °C overnight. The reaction was then concentrated, and the
resulting residue partitioned between EtOAc (50 mL) and saturated sodium bicarbonate
(20 mL). The organic layer was washed with brine (15 mL), dried over sodium sulfate,
filtered, and concentrated. The residue was redissolved in MeOH (10 mL), and treated
with 5 M LiOH in water (1 mL) at 50 °C for 1 hr. The reaction was concentrated, redissolved
in EtOAc, washed with water and brine, dried over sodium sulfate, filtered, the filtrate
mixed with silica gel, concentrated to dryness, and purified by normal phase chromatography
(12 g silica gel, 0-100% EtOAc/Hexanes then 0-10% MeOH/EtOAc) to give the title compound
(157c). MS (
m/
z) 542.15 [M+H]
+.
Synthesis of (3S,7R)-12-(benzyloxy)-3-methyl-1,6,11-trioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(157d):
[0987] (3S,6R,7R)-12-(benzyloxy)-6-hydroxy-3-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(157c, 121mg, 0.223 mmol) was dissolved in DCM (3.0 mL) at 0 °C. DMP (142mg, 0.335 mmol)
was added, and the reaction was removed from the cooling bath and allowed to stir
at rt for 1 hr. The reaction was quenched with a 1:1 mixture of sodium thiosulfate
(5 mL) and sat. NaHCO
3 (5 mL), and stirred vigorously at rt for 20 min. The mixture was diluted with EtOAc
(20 mL), the layers were separated, and the organic layer was washed with brine, dried
over sodium sulfate, filtered, and concentrated. Purification by normal phase chromatography
(12 g silica gel, 0-100% EtOAc/Hexanes, then 0-10% MeOH/EtOAc) gave the title compound
(157d). MS (
m/
z) 540.11 [M+H]
+.
Synthesis of (3S,6S,7R)-12-(benzyloxy)-6-fluoro-3-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(157e):
[0988] The title compound was prepared in a manner similar to compound
53d-1, using (3S,7R)-12-(benzyloxy)-3-methyl-1,6,11-trioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(157d) in place of benzyl (S)-3-(((benzyloxy)carbonyl)amino)-6-oxoazepane-1-carboxylate
(
53b-1).
Synthesis of (3S,6S,7R)-6-fluoro-12-hydroxy-3-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(157):
[0989] The title compound was prepared analogously to compound
147, using (3S,6S,7R)-12-(benzyloxy)-6-fluoro-3-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(157d) in place of (13S)-4-(benzyloxy)-11-fluoro-3,5-dioxo-N-(2,4,6-trifluorobenzyl)-3,5,8,13-tetrahydro-7H-6,13-methanobenzo
[g]pyrido[1,2-a][1,4]diazonine-2-carboxamide (
147b). MS (
m/
z) 454.22 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 12.53 (s, 1H), 10.44 (t, J = 5.7 Hz, 1H), 8.31 (s, 1H), 7.30 - 7.15 (m, 2H), 5.22
(dq, J = 50.8, 7.7 Hz, 1H), 4.62 - 4.51 (m, 3H), 4.38 - 4.23 (m, 2H), 4.01 (dd, J
= 12.9, 11.1 Hz, 1H), 2.41 - 2.30 (m, 1H), 2.30 - 1.97 (m, 3H), 1.24 (d, J = 6.9 Hz,
3H).
Example 155: Preparation of (3S,4R,7S)-4-fluoro-12-hydroxy-3-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(158):
[0990]

[0991] The title compound was prepared in a similar manner to compound
157, using (3S,7S)-12-(benzyloxy)-3-methyl-1,4,11-trioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(144b) in place of (3S,7R)-12-(benzyloxy)-3-methyl-1,6,11-trioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(157d). MS (
m/
z) 454.25 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) δ 8.43 (s, 1H), 6.98 - 6.80 (m, 2H), 5.02 (ddd,
J = 48.7, 6.8, 4.7 Hz, 2H), 4.79 - 4.53 (m, 3H), 3.70 (t,
J = 2.7 Hz, 2H), 2.28 - 2.14 (m,23H), 1.49 (dddd,
J= 35.8, 16.3, 13.5, 3.0 Hz, 2H), 1.37 (dd,
J = 7.1, 2.2 Hz, 3H).
Example 156: Preparation of (6R)-9,10-difluoro-1-hydroxy-2,14-dioxo-N-(2,4,6-trifluorobenzyl)-2,7,12,14-tetrahydro-6H-6,13-methanobenzo[f]pyrido[1,2-a][1,4]diazonine-3-carboxamide
(159):
[0992]

[0993] The title compound was prepared in a similar manner to compound
127-2, using 6,7-difluoro-3,4-dihydronaphthalen-2(1H)-one in place of 6-chloro-3,4-dihydronaphthalen-2(1H)-one.
Chiral separation using preparative chiral HPLC (IH, 60:40 hexane/EtOAc) gave the
title compound
(159) after deprotection of the second eluting peak. MS (
m/
z) 506.15 [M+H]
+.
1H NMR (400 MHz, DMSO-d
6) δ 10.35 (t, J = 5.8 Hz, 1H), 8.50 (s, 1H), 7.40 (dd, J = 11.7, 8.1 Hz, 1H), 7.34
- 7.14 (m, 3H), 5.46 (d, J = 16.6 Hz, 1H), 4.98 (td, J = 7.4, 2.2 Hz, 1H), 4.58 (d,
J = 5.8 Hz, 2H), 4.43 (d, J = 16.7 Hz, 1H), 3.79 (d, J = 14.6 Hz, 1H), 3.61 (dd, J
= 14.9, 2.8 Hz, 1H), 3.37 (dd, J = 15.2, 7.3 Hz, 1H), 2.86 (dd, J = 15.1, 7.6 Hz,
1H).
19F NMR (376 MHz, DMSO-d
6) δ -109.26 (tt, J = 9.4, 6.3 Hz), -112.59 (t, J = 7.2 Hz), -141.08 (ddd, J = 20.7,
11.6, 8.2 Hz), - 141.92 (dt, J = 20.8, 10.0 Hz).
Example 157: (7S)-N-(2,3-difluorobenzyl)-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(160):
[0994]

[0995] The title compound was prepared in a similar manner to compound
51, using (2,3-difluorophenyl)methanamine in place of (3-chloro-2,4-difluorophenyl)methanamine.
MS (
m/
z) 404.2 [M+H]
+.
1H NMR (400 MHz, Methanol-d
4) δ 8.50 (s, 1H), 7.27 - 7.09 (m, 3H), 4.72 (m, 3H), 4.34 (dt,
J = 13.3, 8.0 Hz, 1H), 3.99 (d,
J = 14.8 Hz, 1H), 3.74 (d,
J = 14.4 Hz, 1H), 3.21 (ddd,
J = 13.4, 7.1, 3.0 Hz, 1H), 2.09 (m, 3H), 1.96 - 1.74 (m, 2H), 1.33 (q,
J = 11.9 Hz, 1H).
Example 158: (7S)-12-hydroxy-1,11-dioxo-N-(2,3,4-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(161):
[0996]

[0997] The title compound was prepared in a similar manner to compound
51, using (2,3,4-trifluorophenyl)methanamine in place of (3-chloro-2,4-difluorophenyl)methanamine.
MS (
m/
z) 422.2 [M+H]
+.
1H NMR (400 MHz, Methanol-d
4) δ 8.49 (s, 1H), 7.22 (q,
J = 6.2 Hz, 1H), 7.17 - 7.06 (m, 1H), 4.69 (m, 3H), 4.34 (dt,
J = 13.4, 8.1 Hz, 1H), 3.99 (d,
J = 14.6 Hz, 1H), 3.74 (dd,
J = 14.8, 1.9 Hz, 1H), 3.28 - 3.14 (m, 1H), 2.09 (m, 3H), 1.86 (m, 2H), 1.32 (q,
J = 12.3 Hz, 1H).
Example 159: Preparation of (7S)-N-(2,4-difluorobenzyl)-7-(fluoromethyl)-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
and (7R)-N-(2,4-difluorobenzyl)-7-(fluoromethyl)-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(162-1 and 162-2):
[0998]

Synthesis of tert-butyl 3 -((tert-butoxycarbonyl)amino)-3-(hydroxymethyl-1-carboxylate
(162a):
[0999] NaBH
4 (0.0955g, 2.52 mmol) was added to a solution of tert-butyl 3-((tert-butoxycarbonyl)
amino)-3-formylazepane-1-carboxylate (0.56g, 1.68 mmol) in MeOH (6 mL) at 0 °C. The
mixture solution was stirred at room temperature for 30 minutes, diluted with EtOAc
(20 mL), and washed with NaHCO
3 (15 mL), H
2O, and brine. The organic phase was dried over MgSO
4, and concentrated, to give the title compound
(162a) without further purification. MS (
m/
z) 367.2 [M+Na]
+.
Synthesis of (3-aminoazepan-3-yl)methanol (162b):
[1000] 4 M HCl in dioxane (0.84 mL, 3.36 mmol) was added to a solution of tert-butyl 3-((tert-butoxycarbonyl)amino)-3-(hydroxymethyl)azepane-1-carboxylate
(162a, 0.579 g, 1.68 mmol) in DCM (5 mL) at rt. The reaction mixture was stirred for 2 h,
the solvent was removed under vacuum, and the title compound
(162b) was obtained as the HCl salt. MS
(m/
z) 145.3 [M+H]
+.
Synthesis of 12-(benzyloxy)-N-(2,4-difluorobenzyl)-7-(hydroxymethyl)-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(162c):
[1001] (3-aminoazepan-3-yl)methanol;HCl
(162b, 28.5 mg, 0.112 mmol) and NaHCO
3 (0.075 g, 0.894 mmol) were added to a solution of methyl 3-(benzyloxy)-5-((2,4-difluorobenzyl)
carbamoyl)-4-oxo-4H-pyran-2-carboxylate (0.05 g, 0.112 mmol) in MeOH (1 mL) and H
2O (0.1 mL). The reaction mixture was stirred at rt for 24 hr, then at 45 °C overnight.
The reaction mixture was diluted with EtOAc (10 mL), washed with H
2O (10 mL), and dried over MgSO
4. Solvent was removed, and the residue was purified by silica column to obtain the
title compound (
162c). MS (
m/
z) 524.1 [M+H]
+.
Synthesis of (7S)- and (7R)-12-(benzyloxy)-N-(2,4-difluorobenzyl)-7-(fluoromethyl)-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(162d-1 and 162d-2):
[1002] 12-(benzyloxy)-N-(2,4-difluorobenzyl)-7-(hydroxymethyl)-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(162c) was separated into its individual enantiomers by preparative SFC chromatography on
an IA column using methanol co-solvent. The individual enantiomers (0.05 g, 0.09 mmol)
were dissolved in DCM at 0 °C under N
2, and Deoxo-fluor (0.245 g, 1.1 mmol) was added. The reaction mixture was stirred
at rt for 4 days, then quenched with dropwise addition of saturated aqueous NaHCO
3 at 0 °C, stirring for 1 h. The organic phase was separated and dried over MgSO
4, concentrated, and the residue purified by silica gel column to obtain the title
compounds (
162d-1 and
162d-2). MS (
m/
z) 526.2 [M+H]
+.
Synthesis of (7S)- and (7R)-12-(benzyloxy)-N-(2,4-difluorobenzyl)-7-(fluoromethyl)-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(162-1 and 162-2):
[1003] To (7S)-12-(benzyloxy)-N-(2,4-difluorobenzyl)-7-(fluoromethyl)-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
or (7R)-12-(benzyloxy)-N-(2,4-difluorobenzyl)-7-(fluoromethyl)-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(
162d-1 or
162d-2, 0.03 g, 0.055 mmol) in toluene (1 mL) was added TFA (1 mL). The reaction mixture
was stirred at rt overnight. The mixture was concentrated, and the resulting crude
material was purified by prep-HPLC to afford the title compounds
(162-1 and
162-2). MS
(m/
z) 436.2 [M+H]
+.
[1004] 162-1:
1H NMR (400 MHz, Methanol-d
4) δ 8.64 (s, 1H), 7.42 (q, J = 8.0, 7.6 Hz, 1H), 6.94 (q, J = 9.7 Hz, 2H), 5.19 (d,
J = 11.6 Hz, 1H), 5.07 (d, J = 11.6 Hz, 1H), 4.91 (d, J = 11.6 Hz, 1H), 4.78 (d, J
= 11.6 Hz, 1H), 4.63 (s, 2H), 4.49 - 4.26 (m, 1H), 3.98 (d, J = 14.7 Hz, 1H), 3.78
(d, J = 14.7 Hz, 1H), 3.24 - 3.07 (m, 1H), 2.24 - 1.41 (m, 6H).
[1005] 162-2: 1H NMR (400 MHz, Methanol-d
4) δ 8.64 (s, 1H), 7.42 (q, J = 8.0, 7.6 Hz, 1H), 6.94 (q, J = 9.7 Hz, 2H), 5.19 (d,
J = 11.6 Hz, 1H), 5.07 (d, J = 11.6 Hz, 1H), 4.91 (d, J = 11.6 Hz, 1H), 4.78 (d, J
= 11.6 Hz, 1H), 4.63 (s, 2H), 4.38(m, 1H), 3.98 (d, J = 14.7 Hz, 1H), 3.78 (d, J =
14.7 Hz, 1H), 3.17(m, 1H), 2.01 - 1.6(m, 6H).
Example 160: Preparation of (7S)-N-(2,4,6-trifluorobenzyl)-7-(fluoromethyl)-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
and (7R)-N-(2,4,6-trifluorobenzyl)-7-(fluoromethyl)-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(163-1 and 163-2):
[1006]

[1007] The title compounds were prepared similarly to compounds
162-1 and
162-2, using methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate
in place of methyl 3-(benzyloxy)-5-((2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate.
MS
(m/
z) 454.1 [M+H]
+.
[1008] 163-1: 1H NMR (400 MHz, Methanol-d
4) δ 8.64 (s, 2H), 6.91 (t, J = 8.5 Hz, 4H), 5.21 (d, J = 11.5 Hz, 1H), 5.09 (d, J
= 11.5 Hz, 1H), 4.69 (s, 4H), 4.40 (dt, J = 13.4, 6.7 Hz, 2H), 4.00 (d, J = 14.6 Hz,
2H), 3.80 (d, J = 14.6 Hz, 2H), 3.31 (s, 4H), 3.20 (dd, J = 13.2, 6.5 Hz, 2H), 2.08
- 1.77 (m, 7H), 1.54 (td, J = 17.4, 16.8, 9.5 Hz, 2H).
[1009] 163-2: 1H NMR (400 MHz, Methanol-d
4) δ 8.64 (s, 2H), 6.91 (dd, J = 9.0, 7.9 Hz, 3H), 5.21 (d, J = 11.4 Hz, 1H), 5.09
(d, J = 11.4 Hz, 1H), 4.69 (s, 4H), 4.40 (dt, J = 13.4, 6.6 Hz, 2H), 4.00 (d, J =
14.5 Hz, 2H), 3.81 (d, J = 14.5 Hz, 2H), 3.20 (dd, J = 13.2, 6.4 Hz, 2H), 3.08 (s,
0H), 2.09 - 1.79 (m, 6H), 1.61 - 1.46 (m, 2H).
Example 161: Preparation of (3R,7S)-3-(fluoromethyl)-12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(164):
[1010]

[1011] (1S,10R)-6-benzyloxy-10-(hydroxymethyl)-5,8-dioxo-N-[(2,4,6-trifluorophenyl)methyl]-2,9-
diazatricyclo[7.4.1.02,7]tetradeca-3,6-diene-4-carboxamide
(164a) was prepared from (
3R,7S)-12-(benzyloxy)-3-(((tert-butyldimethylsilyl)oxy)methyl)-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(131d, 40.6 mg, 61.9 umol) as was described in the first step of the synthesis of (3R,7S)-12-(benzyloxy)-3-(difluoromethyl)-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(131e).
[1012] A solution of (1S,10R)-6-benzyloxy-10-(hydroxymethyl)-5,8-dioxo-N-[(2,4,6-trifluorophenyl)methyl]-2,9-diazatricyclo[7.4.1.02,7]tetradeca-3,6-diene-4-carboxamide
(164a, 61.9 umol) in dichloromethane (2 mL) was stirred at 0 °C as (diethylamino)sulfur
trifluoride (DAST, 2 drops) was added. After 30 min, the reaction mixture was stirred
at rt overnight. After ~18 h, the reaction mixture was stirred at 0 °C and added saturated
sodium bicarbonate (5 mL) and the product was extracted with dichloromethane (2 x
10 mL). The combined extracts were dried (MgSO
4), and concentrated to get a crude (3R,7S)-12-(benzyloxy)-3-(fluoromethyl)-1,1-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(
164b). MS (
m/
z) 544.20 [M+H]
+.
[1013] The crude (3R,7S)-12-(benzyloxy)-3-(fluoromethyl)-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(164b) was dissolved in toluene (1 mL) and trifluoroacetic acid (1 mL). After the resulting
solution was stirred at rt for 1 h and concentrated, the residue was purified by preparative
HPLC (column, Gemini 10u C18 110A, AXI/; 250 x 21.2 mm), eluting with 10-70% acetonitrile
in water (0.1% trifluoroacetic acid), to get the title compound
(164). MS (
m/
z) 454.17 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) δ 10.35 (d, J = 6.5 Hz, 1H), 8.39 (s, 1H), 6.84 (t, J = 8.5 Hz, 2H), 4.73 - 4.51
(m, 5H), 4.51 - 4.41 (m, 1H), 3.77 (dt, J = 14.9, 2.7 Hz, 1H), 3.65 (dd, J = 15.0,
1.8 Hz, 1H), 2.17 - 2.08 (m, 1H), 2.05 (dd, J = 14.6, 7.2 Hz, 1H), 1.92 - 1.70 (m,
2H), 1.55 (dt, J = 14.4, 11.5 Hz, 1H), 1.24 - 1.09 (m, 1H).
Example 162: Preparation of (3R,7S)-N-(2,4-difluorobenzyl)-3-(fluoromethyl)-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(165):
[1014]

[1015] The title compound was prepared analogously to (3R,7S)-3-(fluoromethyl)-12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(
164), using benzyl (
3S,7R)
-3-(((benzyloxy)carbonyl)amino)-7-(((
tert-butyldimethylsilyl)oxy)methyl)-2,3,4,7-tetrahydro-1H-azepine-1-carboxylate
(131c) and methyl 3-(benzyloxy)-5-((2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate
in place of methyl 3-(benzyloxy)-5-((2,4,6-trifluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate.
[1016] MS
(m/
z) 436.19 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) δ 10.37 (d, J = 6.7 Hz, 1H), 8.40 (s, 1H), 7.41 (td, J = 8.8, 6.5 Hz, 1H), 7.01
- 6.85 (m, 2H), 4.73 - 4.61 (m, 1H), 4.58 (m, 4H), 4.52 - 4.41 (m, 1H), 3.78 (dt,
J = 15.0, 2.7 Hz, 1H), 3.66 (dd, J = 15.0, 1.8 Hz, 1H), 2.12 (dt, J = 15.5, 2.3 Hz,
1H), 2.05 (dd, J = 14.6, 7.3 Hz, 1H), 1.92 - 1.69 (m, 2H), 1.56 (dt, J = 14.6, 11.6
Hz, 1H), 1.25 - 1.09 (m, 1H).
Example 163: (7S)-N-(4-fluorobenzyl)-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(166):
[1017]

[1018] The title compound was prepared in a manner similar to (7S)-N-(3-chloro-2,4-difluorobenzyl)-12-hydroxy-1,11-dioxo
1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide (51)
except by using (4-fluorophenyl)methanamine instead of (3-chloro-2,4-difluorophenyl)methanamine.
MS (
m/
z) 386.2 [M+H]
+.
1H NMR (400 MHz, Methanol-
d4) δ 8.46 (s, 1H), 7.39 - 7.22 (m, 2H), 7.09 - 6.94 (m, 2H), 4.69 (d,
J = 3.2 Hz, 1H), 4.34 (dt,
J = 13.4, 8.2 Hz, 1H), 3.98 (d,
J = 14.8 Hz, 1H), 3.74 (dd,
J = 14.7, 1.9 Hz, 1H), 3.66 (t,
J = 7.0 Hz, 2H), 3.21 (ddd,
J = 13.3, 7.1, 3.0 Hz, 1H), 2.91 (t,
J = 7.0 Hz, 2H), 2.19 - 1.98 (m, 2H), 1.95 - 1.73 (m, 2H), 1.32 (q,
J = 12.3 Hz, 1H).
Example 164: (7S)-N-benzyl-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(167):
[1019]

[1020] The title compound was prepared in a manner similar to (7S)-N-(3-chloro-2,4-difluorobenzyl)-12-hydroxy-1,11-dioxo
1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide (
51) except by using benzylamine instead of (3-chloro-2,4-difluorophenyl) methanamine.
MS (
m/
z) 368.2 [M+H]
+.
Example 165: Preparation of (7S)-N-(2,4-difluorobenzyl)-12-hydroxy-7-methyl-1,11-dioxo-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(168):
[1021]

Step 1. Synthesis of (S)-3-methyl-2,3,4,7-tetrahydro-1H-azepin-3-amine (168a):
[1022] Tert-butyl (S)-3-(((benzyloxy)carbonyl)amino)-3-methyl-2,3,4,7-tetrahydro-1H-azepine-1-carboxylate
(
112e-1) (1000 mg, 2.77 mol) was dissolved in TFA (2 mL) at room temperature. The resulting
reaction mixture was heated in seal tube at 100 °C for 2 hours. The resulting reaction
mixture was concentrated to dryness. The product was then obtained as TFA salt which
was used directly in the next step. MS (
m/
z) 127.18 [M+H]
+.
Step 2. Synthesis of (7S)-12-(benzyloxy)-N-(2,4-difluorobenzyl)-7-methyl-1,11-dioxo-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide (168b):
[1023] The title compound was prepared in a manner similar to (7S)-12-(benzyloxy)-N-(2,4-difluorobenzyl)-1,11-dioxo-1,3,4,6,7,11-hexahydro-2,7-methanopyrido[1,2-d]
[1,4,7]oxadiazonine-10-carboxamide
(28a) except by using (S)-3-methyl-2,3,4,7-tetrahydro-1H-azepin-3-amine bis TFA salt
(168a) instead of 1,4-oxazepan-6-amine. MS
(m/
z) 506.20 [M+H]
+.
Step 3. Synthesis of (7S)-N-(2,4-difluorobenzyl)-12-hydroxy-7-methyl-1,11-dioxo-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(168):
[1024] The title compound was prepared in a manner similar to (7S)-N-(2,4-difluorobenzyl)-12-hydroxy-1,1-dioxo-1,3,4,6,7,11-hexahydro-2,7-methanopyrido[1,2-d][1,4,7]oxadiazonine
- 10-carboxamide
(28) using (7S)-12-(benzyloxy)-N-(2,4-difluorobenzyl)-7-methyl-1,11-dioxo-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(168b) instead of (7S)-12-(benzyloxy)-N-(2,4-difluorobenzyl)-1,11-dioxo 1,3,4,6,7,11-hexahydro-2,7-methanopyrido
[1,2-d][1,4,7]oxadiazonine-10-carboxamide
(28a). MS (
m/
z) 416.18 [M+H]
+.
1H NMR (400 MHz, Methanol-
d4) δ 8.57 (s, 1H), 7.45 (td,
J = 8.5, 6.3 Hz, 1H), 7.06 - 6.87 (m, 2H), 5.82 - 5.60 (m, 1H), 5.18 - 4.99 (m, 1H),
4.65 (s, 2H), 4.00 - 3.63 (m, 4H), 2.76 - 2.45 (m, 2H), 1.79 (s, 3H).
Example 166: Preparation of (7S)-N-(2,4-difluorobenzyl)-12-hydroxy-1,11-dioxo-1,4,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(169):
[1025]

[1026] The title compound was prepared in a manner similar to (7R)-12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(84) using tert-butyl (S)-3-(2,2,2-trichloroacetamido)-2,3,6,7-tetrahydro-1H-azepine-1-carboxylate
(109a-2) and methyl 3-(benzyloxy)-5-((2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate
instead of tert-butyl (R)-3-(2,2,2-trichloroacetamido)-2,3,6,7-tetrahydro-1H-azepine-1-carboxylate
(
109a-1) and methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate.
MS (m/z) 402.34 [M+H]
+.
1H NMR (400 MHz, DMSO-d6) δ 10.36 (t, J = 5.9 Hz, 1H), 8.59 (s, 1H), 7.42 (td, J =
8.7, 6.6 Hz, 1H), 7.25 (ddd, J = 10.5, 9.3, 2.5 Hz, 1H), 7.07 (tdd, J = 8.6, 2.6,
1.1 Hz, 1H), 5.80 (dddd, J = 10.6, 9.1, 4.0, 1.5 Hz, 1H), 5.60 (dt, J = 11.6, 2.7
Hz, 1H), 5.36 (s, 1H), 4.56 (d, J = 5.9 Hz, 2H), 4.21 (td, J = 12.2, 6.6 Hz, 1H),
4.09 (dd, J = 14.9, 2.6 Hz, 1H), 3.81 (dt, J = 15.0, 1.9 Hz, 1H), 3.31 (dd, J = 12.9,
8.4 Hz, 1H), 2.94 - 2.74 (m, 1H), 2.30 (ddd, J = 15.7, 9.1, 6.5 Hz, 1H).
Example 167: Preparation of (6S,7S)-12-hydroxy-6-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(170):
[1027]

Synthesis of benzyl (S)-3 -(((benzyloxy)carbonyl)amino)-4-methyleneazepane-1-carboxylate and benzyl (S)-3-(((benzyloxy)carbonyl)amino)-4-methyl-2,3,6,7-tetrahydro-1H-azepine-1-carboxylate
(170a-2):
[1028] The title compound was prepared in a manner similar to benzyl 3-(((benzyloxy)carbonyl)amino)-4-ethyl-4-fluoroazepane-1-carboxylate
(105b-2) in
Example 102 except by using benzyl (3R,4S)-3-(((benzyloxy)carbonyl)amino)-4-hydroxy-4-methylazepane-1-carboxylate
instead of benzyl 3-(((benzyloxy)carbonyl)amino)-4-ethyl-4-hydroxyazepane-1-carboxylate
(105a). MS (m/z) 395.12 [M+H]
+.
Synthesis of (3S)-4-methylazepan-3-amine (170a-3):
[1029] Benzyl (S)-3-(((benzyloxy)carbonyl)amino)-4-methyleneazepane-1-carboxylate
(170a-2, 150 mg, 0.38 mmol) was dissolved in 20 mL of absolute ethanol and was sparged under
an argon atmosphere. Palladium hydroxide on carbon (53.4 mg, 0.076 mmol, 20% Pd weight)
was added and the mixture was sparged under a hydrogen atmosphere (1 atm, balloon).
The mixture was stirred vigorously for overnight and sparged under an argon atmosphere.
It was filtered through a pad of Celite
®. The Celite
® was washed with absolute ethanol and the filtrate was concentrated
in vacuo to afford the title compound. MS (m/z) 128.23 [M+H]+.
Synthesis of (6S,7S)-12-(benzyloxy)-6-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(170a-5) and (6R,7S)-12-(benzyloxy)-6-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(170a-6):
[1030] Compounds (7S)-12-(benzyloxy)-6-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(170a-4) was prepared in a manner similar to (7S)-12-(benzyloxy)-N-(2,4-difluorobenzyl)-1,11-dioxo-1,3,4,6,7,11-hexahydro-2,7-methanopyrido[1,2-d][1,4,7]oxadiazonine-10-carboxamide
(28a) in Example 25 using (3S)-4-methylazepan-3-amine
(170a-3) and methyl 3-benzyloxy-4-oxo-5-[(2,4,6-trifluorophenyl)methylcarbamoyl]pyran-2-carboxylate
instead of 1,4-oxazepan-6-amine and methyl 3-(benzyloxy)-5-((2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate.
MS (
m/
z): 526.21 [M+H]
+.
[1031] The mixture was separated by silica gel chromatography to afford (6S,7S)-12-(benzyloxy)-6-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(170a-5). MS (
m/
z): 526.13 and (6R,7S)-12-(benzyloxy)-6-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(170a-6). MS
(m/
z): 526.25. The stereo-center on methyl position was arbitrary assigned.
Synthesis of (6S,7S)-12-hydroxy-6-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(170):
[1032] The title compound was prepared in a manner similar to (7S)-N-(2,4-difluorobenzyl)-12-hydroxy-1,11-dioxo-1,3,4,6,7,11-hexahydro-2,7-methanopyrido[1,2-d][1,4,7]oxadiazonine-10-carboxamide
(28) using (6S,7S)-12-(benzyloxy)-6-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(170a-5) instead of (7S)-12-(benzyloxy)-N-(2,4-difluorobenzyl)-1,11-dioxo-1,3,4,6,7,11-hexahydro-2,7-methanopyrido[1,2-d][1,4,7]oxadiazonine-10-carboxamide
(28a). MS
(m/
z) 436.23 [M+H]+.
1H NMR (400 MHz, DMSO-d6) δ 10.42 (t, J = 5.8 Hz, 1H), 8.49 (s, 1H), 7.28-7.15 (m,
2H), 4.64-4.49 (m, 2H), 4.36 (q, J = 2.5 Hz, 1H), 4.13 (dd, J = 13.1, 6.7 Hz, 1H),
3.80 (dd, J = 14.9, 2.2 Hz, 1H), 3.74 (dd, J = 14.8, 2.1 Hz, 1H), 3.03 (dt, J = 12.7,
5.9 Hz, 1H), 1.90 (d, J = 8.1 Hz, 1H), 1.90-1.74 (m, 1H), 1.72-1.57 (m, 2H), 1.39-1.26
(m, 1H), 1.12 (d, J = 7.2 Hz, 3H).
Example 168: Synthesis of (7S)-N-(3-chloro-2,4-difluorobenzyl)-12-hydroxy-1,11-dioxo-1,4,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(171):
[1033]

[1034] 171a was prepared in a manner similar to tert-butyl (R)-3-amino-2,3,6,7-tetrahydro-1H-azepine-1-carboxylate
(
109b-1) using tert-butyl (S)-3-(2,2,2-trichloroacetamido)-2,3,6,7-tetrahydro-1H-azepine-1-carboxylate
(109a-2) instead of tert-butyl (R)-3-(2,2,2-trichloroacetamido)-2,3,6,7-tetrahydro-1H-azepine-1-carboxylate
(
109a-1). MS (
m/
z): 213.183 [M+H]+.
Synthesis of (7S)-12-(benzyloxy)-1,11-dioxo-1,4,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxylic
acid (171b):
[1035] Prepared in a manner similar to 11-(benzyloxy)-1,10-dioxo-1,3,4,5,6,10-hexahydro-2,6-ethanopyrido[1,2-a][1,4]diazocine-9-carboxylic
acid
(23c) using tert-butyl (S)-3-amino-2,3,6,7-tetrahydro-1H-azepine-1-carboxylate
(171a) instead of tert-butyl 4-aminoazepane-1-carboxylate. MS
(m/
z): 367.100 [M+H]+.
Synthesis of (7S)-12-(benzyloxy)-N-(3-chloro-2,4-difluorobenzyl)-1,11-dioxo-1,4,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide (171c):
[1036] (7S)-12-(benzyloxy)-1,11-dioxo-1,4,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxylic
acid
(171b) (75mg, 0.205 mmol) was dissolved in DMF (2.0 mL) at room temperature, (3-chloro-2,4-difluorophenyl)methanamine
(72.7mg, 0.41 mmol) was added followed by HATU (117 mg, 0.307 mmol) and N,N-diisopropylethylamine
(212 mg, 1.64 mmol). The reaction was stirred at room temperature overnight. The reaction
was diluted with EtOAc, washed with water, saturated ammonium chloride, brine, dried
over sodium sulfate, filtered and concentrated to give a light yellowish oil, used
directly in next step without purification. LCMS-ESI+ (m/z): calcd H
+ for C
27H
22ClF
2N
3O
4, Theoretical: 525.13, Found: 526.09.
Synthesis of (7S)-N-(3-chloro-2,4-difluorobenzyl)-12-hydroxy-1,11-dioxo-1,4,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(171):
[1037] (1S)-6-benzyloxy-N-[(3-chloro-2,4-difluoro-phenyl)methyl]-5,8-dioxo-2,9-diazatricyclo[7.4.1.02,7]tetradeca-3,6,12-triene-4-carboxamide
from previous step was treated with a mixture of Toluene (1.0 mL ) and TFA (1.0 mL
) at room temperature for overnight. The reaction was concentrated, redissolved in
DMF, filtered and purified by reverse phase prep HPLC. LCMS-ESI+ (m/z): calcd H
+ for C
20H
16ClF
2N
3O
4, Theoretical: 435.08, Found: 435.99. 1H NMR (400 MHz, DMSO-
d6) δ 10.41 (t, J = 6.0 Hz, 1H), 8.59 (s, 1H), 7.40 (td, J = 8.4, 6.2 Hz, 1H), 7.30
(td, J = 8.7, 1.7 Hz, 1H), 5.88 - 5.71 (m, 1H), 5.60 (dq, J = 11.7, 2.7 Hz, 1H), 5.36
(s, 1H), 4.61 (d, J = 6.0 Hz, 2H), 4.21 (td, J = 12.2, 6.6 Hz, 1H), 4.10 (dd, J =
14.9, 2.5 Hz, 1H), 3.81 (dt, J = 15.4, 1.9 Hz, 2H), 3.31 (dd, J = 12.9, 8.4 Hz, 1H),
2.92 - 2.78 (m, 1H), 2.30 (ddd, J = 15.7, 9.0, 6.5 Hz, 1H).
Example 169-1: Preparation of (6R,7S)-N-(2,4-difluorobenzyl)-6-fluoro-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(172-1):
[1038]

Step 1: Synthesis of (6S,7S)-12-(benzyloxy)-N-(2,4-difluorobenzyl)-6-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide (172-1a):
[1039] (1S)-6-Benzyloxy-N-[(2,4-difluorophenyl)methyl]-5,8,13-trioxo-2,9-diazatricyclo[7.4.1.02,7]tetradeca-3,6-diene-4-carboxamide
(16a-2) (60.0 mg, 0.118 mmol) in anhydrous MeOH (3.0 mL) was treated with sodium borohydride
(8.95 mg, 0.236 mmol) at 0 °C for 10 min. The reaction was quenched with saturated
ammonium chloride dropwise, extracted with EtOAc, the organic layer was washed with
brine, dried over sodium sulfate, filtered and concentrated to give the product. MS
(m/z): 510.18 [M+H]
+.
Step 2: synthesis of (6R,7S)-12-(benzyloxy)-N-(2,4-difluorobenzyl)-6-fluoro-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,2-a]diazonine-10-carboxamide
(172-1b):
[1040] (6S,7S)-12-(Benzyloxy)-N-(2,4-difluorobenzyl)-6-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(
172-1a) (50.0 mg, 0.098 mmol) in DCM (5.0 mL) was cooled to 0 °C and treated with Deoxo-Fluor
(86.8mg, 0.393 mmol). The reaction was allowed to warm up to room temperature as ice
melted overnight. The reaction was cooled back to 0 °C and quenched with saturated
sodium bicarbonate. Extracted with EtOAc, the organic layer was washed with brine,
dried over sodium sulfate, filtered and concentrated, used directly in next step.
MS (
m/
z) 512.24 [M+H]
+.
Step 3: Synthesis of (6R,7S)-N-(2,4-difluorobenzyl)-6-fluoro-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(172-1):
[1041] (6R,7S)-12-(Benzyloxy)-N-(2,4-difluorobenzyl)-6-fluoro-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(
172-1b) (50mg, 0.098 mmol) was treated with a mixture of TFA (0.3 mL) and toluene (0.3 mL)
at room temperature for overnight. The reaction was concentrated, re-dissolved in
DMF, filtered and purified by Gilson HPLC (Gemini, 5 - 100% ACN/H
2O + 0.1% TFA) to give title compound after lyophilization. MS
(m/
z) 422.27 [M+H]
+.
1H NMR (400 MHz, DMSO-d6) δ 10.33 (t, J = 6.0 Hz, 1H), 8.60 (s, 1H), 7.41 (td, J =
8.7, 6.6 Hz, 1H), 7.25 (ddd, J = 10.6, 9.3, 2.6 Hz, 1H), 7.13 - 6.98 (m, 1H), 5.12
-4.89 (m, 2H), 4.56 (d, J = 6.0 Hz, 2H), 4.13 (dt, J = 13.0, 8.0 Hz, 1H), 3.92 - 3.84
(m, 2H), 3.13 (ddd, J = 13.1, 7.1, 2.9 Hz, 1H), 2.09 (dtd, J = 34.8, 19.6, 17.3, 7.8
Hz, 2H), 1.84 - 1.69 (m, 1H), 1.40 (dt, J = 40.8, 13.6 Hz, 1H).
Example 169-2: Preparation of (7R)-N-(2,4-difluorobenzyl)-6-fluoro-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(172-2):
[1042]

[1043] The title compound was prepared in a manner similar to of (6R,7S)-N-(2,4-difluorobenzyl)-6-fluoro-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(172-1) except using (1R)-6-Benzyloxy-N-[(2,4-difluorophenyl)methyl]-5,8,13-trioxo-2,9-diazatricyclo[7.4.1.02,7]
tetradeca-3,6-diene-4-carboxamide (16a-1) instead of (1R)-6-Benzyloxy-N-[(2,4-difluorophenyl)methyl]-5,8,13-trioxo-2,9-diazatricyclo[7.4.1.02,7]tetradeca-3,6-diene-4-carboxamide
(16a-2). MS (m/z) 422.10 [M+H]+.
1HNMR (400 MHz, DMSO-d6) δ 10.61 (s, 1H), 10.33 (t, J = 5.9 Hz, 1H), 8.60 (s, 1H),
7.41 (td, J = 8.7, 6.6 Hz, 1H), 7.25 (ddd, J = 10.5, 9.3, 2.5 Hz, 1H), 7.12 - 7.02
(m, 1H), 5.30 - 4.84 (m, 2H), 4.56 (d, J = 5.9 Hz, 2H), 4.13 (dt, J = 15.6, 7.9 Hz,
1H), 3.90 (d, J = 14.9 Hz, 1H), 3.82 (dd, J = 15.0, 2.0 Hz, 1H), 3.13 (ddd, J = 13.2,
7.1, 2.8 Hz, 1H), 2.20 - 1.96 (m, 2H), 1.75 (d, J = 15.2 Hz, 1H), 1.40 (ddd, J = 41.0,
15.8, 11.2 Hz, 1H).
Example 170: Preparation of (7S)-N-(2,4-difluorobenzyl)-12-hydroxy-7-methyl-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(173):
[1044]

[1045] (7S)-12-(benzyloxy)-N-(2,4-difluorobenzyl)-7-methyl-1,11-dioxo-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(50 mg, 0.1mmol) was dissolved in EtOH (5 mL). Pd/C (10%) (5 mg) was added. Hydrogenolysis
was applied with hydrogen balloon. Reaction was complete after 3 hrs. Reaction mixture
was then filtered through celite plug. The filtrate was concentrated and purified
by Gilson HPLC (Gemini, 5 - 100% ACN/H
2O + 0.1% TFA) to give title compound after lyophilization. MS (m/z) 418.29 [M+H]
+.
1H NMR (400 MHz, Methanol-d4) δ 8.59 (s, 1H), 7.45 (td, J = 8.5, 6.4 Hz, 1H), 7.05
- 6.84 (m, 2H), 4.65 (s, 2H), 4.39 (dt, J = 13.4, 6.7 Hz, 1H), 3.92 - 3.51 (m, 2H),
3.18 (dt, J = 13.1, 6.4 Hz, 1H), 2.08 (ddd, J = 15.4, 10.3, 2.4 Hz, 1H), 2.00 - 1.84
(m, 4H), 1.73 (s, 3H), 1.62 - 1.37 (m, 1H).
Example 171: Synthesis of (3S,6R,7S)-12-hydroxy-3,6-dimethyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(174):
[1046]

Step 1. Synthesis of (E)-but-2-en-1-yl ((benzyloxy)carbonyl)glycinate (174a):
[1047] To a solution of ((benzyloxy)carbonyl)glycine (120.0 g, 574 mmol, 1.0 eq) in DCM
(1200 mL) was added (E)-but-2-en-1-ol (49.7 g, 689 mmol, 1.2 eq) and DMAP (14.1 g,
115 mmol, 0.2 eq). The mixture was cooled to 0 °C and EDC.HCl (164.9 g, 860 mmol,
1.5 eq) was added by portion wise. The mixture was stirred at room temperature for
1.5 h. HPLC showed completion. Water (1200 mL) was added and phases were separated.
The organic phase was washed with water (500 mL×2). Dried over Na
2SO
4, concentrated to give a crude residue, which was purified by silica gel column chromatography
(eluted with PE: EA = 5: 1) to give compound
174a (140 g, 93%, contain EtOAc) as a colorless oil.
1H NMR (400 MHz, CDCl
3) δ 7.36-7.28 (m, 5H), 5.86-5.77 (m, 1H), 5.62-5.55 (m, 1H), 5.44 (s, 1 H), 5.13 (s,
2H), 4.73 (d,
J = 6.8 Hz, 2H), 3.98 (d,
J= 5.6 Hz, 2H), 1.74 (d,
J= 6.4 Hz, 3H).
Synthesis of syn-(±)-2-(((benzyloxy)carbonyl)amino)-3-methylpent-4-enoic acid (177b):
[1048] To a solution of diisopropylamine (161.4 g, 1.60 mol, 3.0 eq) in THF (1500 mL) at
-20 °C was added
n-BuLi (2.4 M, 552 mL, 1.32 mol, 2.5 eq) by drop with under N
2. The mixture was stirred at -20 °C for 30 mins. Then cooled to -78 °C and a solution
of (E)-but-2-en-1-yl ((benzyloxy)carbonyl)glycinate
(174a) (140.0 g, 0.53 mol, 1.0 eq) in THF (382 mL) was added by dropwise at -78 °C. The
mixture was stirred for 30 mins at -78 °C. ZnCl
2 (1 M in THF, 600 mL, 0.60 mol, 1.13 eq) was added by dropwise at -78 °C. The mixture
was warmed to room temperature and stirred for 3-4 h. Adjusted pH = 4 - 5 with 1 N
HCl at 0 °C. Extracted with MTBE (750 mL×2). Most of THF was removed under vacuo.
The organics were washed with 2 N NaOH (500 mL×2). The aqueous phase was adjusted
pH = 4 - 5 with 1 N HCl at 0 °C. Extracted with MTBE (750 mL×2). Dried over Na
2SO
4, concentrated to give crude product (70 g), which was purified with silica gel column
(eluted with PE: EA = 1: 1) to give compound
174b. Recrystallization from Et
2O (160 mL) and hexane (320 mL) afforded
174b. 1H NMR (400 MHz, DMSO-
d6) δ 12.64 (br, 1H), 7.54 (s, 1H), 7.36 - 7.31 (m, 5H), 5.82 - 5.72 (m, 1H), 5.07 -
4.99 (m, 4H), 4.05 - 4.01 (m, 1H), 2.64 (t,
J= 6.8 Hz, 1H), 0.99 (d,
J= 6.8 Hz, 3H). MS (
m/
z): 264.10 [M+H]
+.

Synthesis of syn-(±)-benzyl (1-hydroxy-3-methylpent-4-en-2-yl)carbamate (174c):
[1049] A solution of the syn-(±)-2-(benzyloxycarbonylamino)-3-methyl-pent-4-enoic acid (
177b) (2000.1 mg, 7.60 mmol) and 4-methylmorpholine (1 mL, 9.20 mmol) in tetrahydrofuran
(20 mL) was stirred at ice-salt bath as isobutyl chloroformate (1.2 mL, 9.10 mmol)
was added dropwise. After 30 min, the reaction mixture was filtered, and the solids
were washed with tetrahydrofuran (10 mL). The filtrate was stirred in the ice-salt
bath as a solution of sodium borohydride (441 mg, 11.7 mmol) in water (4 mL) was added
dropwise. The reaction mixture was further diluted with water (16 mL) and the resulting
reaction mixture was stirred at rt overnight. The reaction mixture was diluted with
saturated ammonium chloride (50 mL) and water (50 mL) before extracted with ethyl
acetate (100 mL × 2). After the extracts were washed with brine (1 × 100 mL), the
organic fractions were combined, dried (MgSO
4) and concentrated. The residue was purified by column chromatography on silica gel
eluting 15-55% ethyl acetate in hexane to get the title compound
174c. MS
(m/
z) 249.81 [M+H]
+.
Synthesis of a mixture of benzyl ((2S,3R)-2-(((benzyloxy)carbonyl)amino)-3-methylpent-4-en-1-yl)((S)-but-3-en-2-yl)carbamate
(174d-1) and benzyl ((2R,3S)-2-(((benzyloxy)carbonyl)amino)-3-methylpent-4-en-1-yl)((S)-but-3-en-2-yl)carbamate
(174d-2):
[1050] A solution of
syn-(±)-benzyl (1-hydroxy-3-methylpent-4-en-2-yl)carbamate
(174c) (806.3 mg, 3.23 mmol) in dichloromethane (37 mL) was stirred at 0 °C bath as Dess
Martin periodinane (1785.6 mg, 4.21 mmol) was added. After 10 min, the reaction mixture
was stirred at rt. After 1.5 h, additional Dess-Martin periodinane (3.45.7 mg, 0.815
mmol) was added at rt and the resulting solution was stirred at rt for 1 h. The reaction
mixture was stirred at 0 °C and added saturated sodium bicarbonate (100 mL). After
the mixture was transferred to a separatory funnel, 10% sodium thiosulfate solution
(1 × 100 mL), and ethyl acetate (100 mL) were added and two fractions were separated.
After the lower aq. fraction was extracted with ethyl acetate (100 mL × 1), the two
resulting organic fractions were washed with brine (70 mL × 1), combined, dried (MgSO
4), and concentrated.
[1051] A suspension of the residue and (2S)-but-3-en-2-amine hydrochloride (385.6 mg, 3.58
mmol) in tetrahydrofuran (21 mL) was stirred at rt as triethylamine (0.5 mL, 3.59
mmol) and sodium triacetoxyborohydride (1156.7 mg, 5.46 mmol) were added. The resulting
reaction mixture was stirred at rt for 22 h. The reaction mixture was concentrated
to remove most of tetrahydrofuran and diluted with water (~100 mL) before the product
was extracted with ethyl acetate (100 mL × 2). After the extracts were washed with
water (x 1), the organic fractions were combined, dried (MgSO
4) and concentrated to get the crude amine.
[1052] A mixture of the crude amine and potassium carbonate (500.0 mg, 3.62 mmol) in 1,4-dioxane
(15 mL) and water (15 mL) was stirred at 0 °C as benzyl chloroformate (0.525 mL, 3.57
mmol) was added. The resulting mixture was stirred at 0 °C for ~1 h and then at rt
overnight. The reaction mixture was diluted with water (100 mL) and the product was
extracted with ethyl acetate (100 mL × 2). After the extracts were washed with water
(150 mL × 1), combined, dried (MgSO
4), and concentrated, the residue was purified by column chromatography on silica gel
eluting 0-30% ethyl acetate in hexane to get the title compounds
174d-1 and
174d-2 as a mixture: MS
(m/
z) 437.26 [M+H]
+.
Synthesis of benzyl (3S,4R,7S) and (3R,4S,7S)-3-(((benzyloxy)carbonyl)amino)-4,7-dimethyl-2,3,4,7-tetrahydro-1H-azepine-1-carboxylate
(174e-1 and 174e-2):
[1053] A solution of the diastereomeric mixture of reactant (
174d-1 &
174d-2, 984.5 mg, 2.26 mmol) and Grubbs catalyst 2nd generation (131.7 mg, 155 umol) in toluene
(600 mL) was purged with argon gas for 15 min. The resulting solution was stirred
at 80 °C bath for 3 h. The reaction mixture was concentrated, and the residue was
purified by column chromatography on silica gel eluting 5-40% ethyl acetate in hexane
to get the title compounds
174e-1 and
174e-2, respectively. Compound
174e-1: MS (
m/
z) 409.20 [M+H]
+. Compound
174e-2: MS (
m/
z) 409.05 [M+H]
+.
Synthesis of (3S,6R,7S)-12-(benzyloxy)-3,6-dimethyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(174f-1):
[1054] Benzyl (3S,4R,7S)-3-(((benzyloxy)carbonyl)amino)-4,7-dimethyl-2,3,4,7-tetrahydro-1H-azepine-1-carboxylate
(
174e-1) (238.8 mg, 0.585 mmol) was dissolved in TFA (5 mL) and heated to 100 °C in a sealed
vial for 2 h. The reaction mixture was concentrated and co-evaporated with toluene
once. A half of the residue was mixed with methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate
(128.1 mg, 0.286 mmol), and sodium bicarbonate (138 mg, 1.64 mmol) before methanol
(5 mL) and water (5 mL) were added. The resulting mixture was heated at 50 °C. After
2.5 h, additional methanol (10 mL) and dichloromethane (15 mL) were added and the
resulting suspension was stirred at 50 °C bath. After 22 h, the reaction mixture was
concentrated to remove most of the organic solvents and the residue was dissolved
in dichloromethane (25 mL) and water (25 mL). After separation of two fractions, the
aqueous fraction was extracted with dichloromethane (25 mL × 1) and the combined two
organic extracts were dried (MgSO
4) and concentrated. The residue was purified by column chromatography on silica gel
eluting 0-30% methanol in dichloromethane to get the title compound 7: MS
(m/
z) 538.16 [M+H]
+.
Synthesis of (3S,6R,7S)-12-hydroxy-3,6-dimethyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(174):
[1055] To a flask containing (3S,6R,7S)-12-(benzyloxy)-3,6-dimethyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(15.1 mg, 28.1 umol) and 10% Pd in C (4.8 mg) was added ethanol (3 mL) and the resulting
mixture was stirred under H
2 atmosphere for 1 h. The reaction mixture was filtered through celite pad and the
filtrate was concentrated. The residue was dissolved in DMF, filtered through a membrane
filter, and the filtrate was injected on preparative HPLC (column, Gemini 5um C18
110A, LC column 100 × 30 mm) eluting 10-70% acetonitrile (0.1% TFA) in water (0.1%
TFA) over 25 min.). The product containing fraction was freeze-dried to get the title
compound
174: MS
(m/
z) 450.23 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) δ 10.39 (s, 1H), 8.42 (s, 1H), 6.92 - 6.74 (m, 2H), 4.59 (d, J = 5.5 Hz, 2H), 4.50
(dp, J = 10.2, 6.7 Hz, 1H), 4.17 (q, J = 2.0 Hz, 1H), 3.57 (d, J = 1.9 Hz, 2H), 2.18
(p, J = 3.8 Hz, 1H), 1.85 (dt, J = 14.4, 7.1 Hz, 1H), 1.61 - 1.45 (m, 2H), 1.31 (ddd,
J = 15.2, 11.2, 3.4 Hz, 1H), 1.21 (d, J = 6.7 Hz, 3H), 1.12 (d, J = 7.3 Hz, 3H).
Example 172: Synthesis of (3S,6R,7S)-N-(2,4-difluorobenzyl)-12-hydroxy-3,6-dimethyl-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(175):
[1056]

[1057] The title compound was prepared in a manner similar to compound
174f-1 except using methyl 3-(benzyloxy)-5-((2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate
instead of using methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate.
MS (m/z) 432.24 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) δ 10.43 (s, 1H), 8.47 (s, 1H), 7.43 (q, J = 9.1, 8.5 Hz, 1H), 7.04 - 6.87 (m, 2H),
4.60 (d, J = 5.3 Hz, 2H), 4.57 - 4.45 (m, 1H), 4.21 (s, 1H), 3.60 (d, J = 1.9 Hz,
2H), 2.22 (dt, J = 7.8, 3.9 Hz, 1H), 1.88 (dt, J = 14.5, 7.1 Hz, 1H), 1.67 - 1.46
(m, 2H), 1.35 (ddd, J = 15.4, 11.5, 3.1 Hz, 1H), 1.25 (d, J = 6.6 Hz, 3H), 1.16 (d,
J = 7.3 Hz, 3H).
Example 173: (3S,6R,7S)-12-hydroxy-3,6-dimethyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(176):
[1058]

[1059] To a solution of (3S,6R,7S)-12-(benzyloxy)-3,6-dimethyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(
174f-1) (7, 14.2 mg, 26.4 umol) in toluene (0.5 mL) was added 2,2,2-trifluoroacetic acid
(1 mL) at rt and the resulting solution was stirred at rt. After 2 h, the reaction
mixture was concentrated, and the residue was dissolved in DMF, filtered through a
membrane filter. The filtrate was injected on preparative HPLC (column, Gemini 5um
C18 110A, LC column 100 × 30 mm) eluting 10-70% acetonitrile (0.1% TFA) in water (0.1%
TFA) over 25 min.) The product containing fraction was freeze-dried to get the title
compound
176: MS
(m/
z) 448.19 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) δ 10.31 (s, 1H), 8.35 (s, 1H), 6.84 (t, J = 8.5 Hz, 2H), 5.45 - 5.31 (m, 2H), 5.28
(d, J = 7.8 Hz, 1H), 4.59 (d, J = 5.2 Hz, 2H), 4.26 - 4.12 (m, 1H), 3.89 (dd, J =
14.3, 2.8 Hz, 1H), 3.54 (d, J = 14.2 Hz, 1H), 2.75 - 2.57 (m, 1H), 1.30 (d, J = 7.1
Hz, 3H), 1.18 (d, J = 7.1 Hz, 3H).
Example 174: Synthesis of (3S,6R,7S)-N-(2,4-difluorobenzyl)-12-hydroxy-3,6-dimethyl-1,11-dioxo-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(177):
[1060]

[1061] To a solution of (1S,10S,13R)-6-benzyloxy-N-[(2,4-difluorophenyl)methyl]-10,13-dimethyl-5,8-dioxo-2,9-diazatricyclo[7.4.1.02,7]tetradeca-3,6,11-triene-4-carboxamide
(175a, 13.1 mg, 25 umol) in toluene (0.5 mL) was added 2,2,2-trifluoroacetic acid (1 mL)
at rt and the resulting solution was stirred at rt for 2 h. The reaction mixture was
concentrated, and the residue was dissolved in DMF, filtered through a membrane filter
before the filtrate was injected on preparative HPLC (column, Gemini 5um C18 110A,
LC column 100 × 30 mm) eluting 10-70% acetonitrle (0.1% TFA) in water (0.1% TFA) over
25 min.) and freeze-dried to get the title compound
177. MS
(m/
z) 430.22 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) δ 10.32 (s, 1H), 8.37 (s, 1H), 7.41 (q, J = 8.1 Hz, 1H), 7.03 - 6.85 (m, 2H), 5.47
- 5.32 (m, 2H), 5.32 - 5.23 (m, 1H), 4.58 (d, J = 5.0 Hz, 2H), 4.22 (dd, J = 5.8,
2.7 Hz, 1H), 3.89 (dd, J = 14.3, 2.8 Hz, 1H), 3.55 (d, J = 14.2 Hz, 1H), 2.68 (s,
1H), 1.30 (d, J = 7.1 Hz, 3H), 1.19 (d, J = 7.1 Hz, 3H).
Example 175: Preparation of (7S)-4-fluoro-12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(178):
[1062]

[1063] The title compounds were prepared analogously to (
4R,
7S)-N-(2,4-difluorobenzyl)-4-fluoro-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
and (
4S,
7S)-N-(2,4-difluorobenzyl)-4-fluoro-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
53-1, using methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate
in place of methyl 3-(benzyloxy)-5-((2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate.
MS
(m/
z) 440.30 [M+H]
+.
1H NMR (400 MHz, Methanol-d4) δ 8.51 (s, 1H), 6.91 (t, J = 8.4 Hz, 2H), 5.23 (t, J
= 6.2 Hz, 1H), 5.11 (t, J = 6.3 Hz, 1H), 4.69 (s, 3H), 4.05 (d, J = 14.8 Hz, 1H),
3.76 (d, J = 14.6 Hz, 1H), 3.49 (dd, J = 21.7, 15.2 Hz, 1H), 2.46 (t, J = 14.7 Hz,
1H), 2.29 - 2.20 (m, 1H), 2.04 (d, J = 15.3 Hz, 1H), 1.53 (dd, J = 31.1, 16.5 Hz,
1H).
Example 176: Preparation of (6S,7R)-6-fluoro-12-hydroxy-6-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(179):
[1064]

[1065] Prepared in a manner similar to (6S,7R)-N-(2,4-difluorobenzyl)-6-fluoro-12-hydroxy-6-methyl-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(60-1) in Example
57a using methyl 3-benzyloxy-4-oxo-5-[(2,4,6-trifluorophenyl)methylcarbamoyl]pyran-2-carboxylate
instead of methyl 3-benzyloxy-5-[(2,4-difluorophenyl)methylcarbamoyl]-4-oxo-pyran-2-carboxylate.
MS
(m/
z) 454.10 [M+H]
+.
1HNMR (400 MHz, DMSO-d6) δ 10.64 (s, 1H), 10.35 (t, J = 5.8 Hz, 1H), 8.41 (d, J = 1.9
Hz, 1H), 7.21 (t, J = 8.6 Hz, 2H), 4.80 (s, 1H), 4.57 (d, J = 5.7 Hz, 2H), 4.18 (dt,
J = 13.3, 8.4 Hz, 1H), 3.94 (ddd, J = 15.5, 6.3, 3.0 Hz, 1H), 3.74 (d, J = 15.5 Hz,
3H), 3.10 (dd, J = 13.0, 7.3 Hz, 1H), 1.90 (q, J = 7.7 Hz, 1H), 1.80 (td, J = 13.4,
7.6 Hz, 2H), 1.62 (d, J = 23.8 Hz, 3H), 1.45 - 1.32 (m, 1H).
Example 177: (3R,7S)-3-(fluoromethyl)-12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(180):
[1066]

Synthesis of (R)-1-((tert-butyldimethylsilyl)oxy)but-3-en-2-amine (180a):
[1067] A suspension of (
2R)-2-aminobut-3-en-1-ol hydrochloride (1010.4 mg, 8.176 mmol) and triethylamine (3.5
mL, 25.11 mmol) in dichloromethane (12 mL) was stirred at 0 °C bath as
tert-butyldimethylsilyl chloride (1.35 g, 8.957 mmol) was added. After addition, the reaction
mixture was stirred at rt. After 23 h, the reaction mixture was diluted with dichloromethane
(30 mL) and washed with saturated sodium bicarbonate solution (50 mL). After the aqueous
fraction was extracted with dichloromethane (2 × 30 mL), the organic fractions were
washed with brine (30 mL × 1), combined, dried (MgSO
4), and concentrated. The resulting mixture was dissolved in ethyl ether, filtered,
and the filtrate was concentrated to get the crude TBS protected product: MS
(m/
z) 202.01 [M+H]
+.
Synthesis of benzyl (S)-(1-hydroxypent-4-en-2-yl)carbamate (180b):
[1068] A solution of (
2S)-2-amino-4-penten-1-ol (2000 mg, 14.5 mmol), potassium carbonate (6030 mg, 43.6 mmol)
in water (36 mL) and 1,4-dioxane (36 mL) was stirred at 0 °C bath as benzyl chloroformate
(2.6 mL, 17.52 mmol) was added. The mixture was stirred at 0 °C for 2 h and then rt
overnight. The reaction mixture was diluted with saturated sodium bicarbonate (150
mL) and the product was extracted with ethyl acetate (150 mL × 2). After the extracts
were washed with water (1 × 150 mL), the organic fractions were combined, dried (MgSO
4), and concentrated. The residue was purified by column chromatography on silica gel
eluting 0-70% ethyl acetate in hexane to get the title compound. MS
(m/
z) 235.84 [M+H]
+.
Synthesis of benzyl ((S)-2-(((benzyloxy)carbonyl)amino)pent-4-en-1-yl)((R)-1-((tert-butyldimethylsilyl)oxy)but-3-en-2-yl)carbamate (180c):
[1069] The title compound was synthesized in a manner similar to a mixture of benzyl ((2S,3R)-2-(((benzyloxy)carbonyl)amino)-3-methylpent-4-en-1-yl)((S)-but-3-en-2-yl)carbamate
(
174d-1) and benzyl ((2R,3S)-2-(((benzyloxy)carbonyl)amino)-3-methylpent-4-en-1-yl)((S)-but-3-en-2-yl)carbamate
(174d-2) except using (
R)-1-((
tert-butyldimethylsilyl)oxy)but-3-en-2-amine
(180a) and benzyl (
S)-(1-hydroxypent-4-en-2-yl)carbamate
(180b) instead of syn-(±)-benzyl N-[1-(hydroxymethyl)-2-methyl-but-3-enyl]carbamate
(174c) and (2S)-but-3-en-2-amine hydrochloride respectively. MS
(m/
z) 553.10 [M+H]
+.
Synthesis of benzyl (3S,7R)-3-(((benzyloxy)carbonyl)amino)-7-(((tert-butyldimethylsilyl)oxy)methyl)-2,3,4,7-tetrahydro-1H-azepine-1-carboxylate (180d):
[1070] The title compound was synthesized in a manner similar to benzyl (
3S,4R,7S) and (
3R,4S,7S)-3-(((benzyloxy)carbonyl)amino)-4,7-dimethyl-2,3,4,7-tetrahydro-1H-azepine-1-carboxylate
(
174e-1 and
174e-2) except using benzyl ((
S)-2-(((benzyloxy)carbonyl)amino)pent-4-en-1-yl)((
R)-1-((tert-butyldimethylsilyl)oxy)but-3-en-2-yl)carbamate
(180c) instead of a mixture of benzyl ((2S,3R)-2-(((benzyloxy)carbonyl)amino)-3-methylpent-4-en-1-yl)((S)-but-3-en-2-yl)carbamate
(
174d-1) and benzyl ((2R,3S)-2-(((benzyloxy)carbonyl)amino)-3-methylpent-4-en-1-yl)((S)-but-3-en-2-yl)carbamate
(174d-2). MS
(m/
z) 525.01 [M+H]
+.
Synthesis of (3R,7S)-12-(benzyloxy)-3-(((tert-butyldimethylsilyl)oxy)methyl)-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(180e):
[1071] A mixture of benzyl (
3S,
7R)-3-(((benzyloxy)carbonyl)amino)-7-(((
tert-butyldimethylsilyl)oxy)methyl)-2,3,4,7-tetrahydro-1H-azepine-1-carboxylate
(180d) (719.7 mg, 1.37 mmol) and 10% palladium on carbon (140.9 mg) in ethanol (27 mL) and
EtOAc (13.5 mL) was stirred under H
2 atmosphere. After 3 h, the reaction mixture was filtered through celite, washed with
ethanol, and the filtrate was concentrated to get the diamine: MS
(m/
z) 259.24 [M+H]
+.
[1072] One third of the above residue was mixed with methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate
(205.3 mg, 0.459 mmol), and sodium bicarbonate (90.2 mg, 1.07 mmol) before methanol
(5 mL) and water (1 mL) were added. The resulting mixture was heated at 50 °C for
22 h and at 60 °C for 24 h. The reaction mixture was concentrated to remove most of
solvent and the residue was dissolved in ethyl acetate (25 mL) and water (25 mL),
and two fractions were separated. After the aq. fraction was extracted with ethyl
acetate (25 mL × 1), two organic fractions were washed with brine (x 1), combined,
dried (MgSO
4) and concentrated. The residue was purified by column chromatography on silica gel
eluting 0-15% methanol in dichloromethane to get the title compound: MS
(m/
z) 656.63 [M+H]
+.
Synthesis of (3R,7S)-12-(benzyloxy)-3-(hydroxymethyl)-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(180f):
[1073] (
3R,7S)-12-(benzyloxy)-3-(((tert-butyldimethylsilyl)oxy)methyl)-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide_(41.0
mg, 62.5 umol) was dissolved in 4 N HCl in dioxane (3 mL) in 0 °C bath and stirred
at 0 °C for 30 min. The reaction mixture was concentrated, and the residue was co-evaporated
with toluene (x 1). The residue was purified by column chromatography on silica gel
eluting 0-25% methanol in dichloromethane to get the title compound: MS
(m/
z) 542.15 [M+H]
+.
Synthesis of (3R,7S)-3-(fluoromethyl)-12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(180g):
[1074] A solution of (3R,7S)-12-(benzyloxy)-3-(hydroxymethyl)-1,1-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(180f, 30.5 mg, 56.3 umol) in dichloromethane (2 mL) was stirred at 0 °C as (Diethylamino)sulfur
trifluoride (DAST, 0.01 mL, 75.7 umol) was added. After 30 min, the reaction mixture
was stirred at rt overnight. After ~18 h, additional (Diethylamino)sulfur trifluoride
(DAST, 0.01 mL, 75.7 umol) was added at rt and stirred at rt for 6 h. After the reaction
mixture was stirred at 0 °C and saturated sodium bicarbonate (15 mL) was added, and
the product was extracted with ethyl acetate (2 × 15 mL). The combined extracts were
dried (MgSO
4), and concentrated: MS (
m/
z) 544.15 [M+H]
+.
Synthesis of (3R,7S)-3-(fluoromethyl)-12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(180):
[1075] The crude residue from the previous step was dissolved in toluene (1 mL) and TFA
(1 mL) and stirred at rt for 2 h. The reaction mixture was concentrated, and the residue
was dissolved in DMF (1 mL) before filtered. The filtrate was purified by preparative
HPLC (column, Gemini 5um C18 110A, LC column 100 × 30 mm) eluting 10-70% acetonitrile
(0.1% TFA) in water (0.1% TFA) over 20 min.). The purified fraction was freeze-dried
to get the title compound: MS
(m/
z) 454.17 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) δ 10.35 (d, J = 6.5 Hz, 1H), 8.39 (s, 1H), 6.84 (t, J = 8.5 Hz, 2H), 4.73 - 4.51
(m, 5H), 4.51 - 4.41 (m, 1H), 3.77 (dt, J = 14.9, 2.7 Hz, 1H), 3.65 (dd, J = 15.0,
1.8 Hz, 1H), 2.17 - 2.08 (m, 1H), 2.05 (dd, J = 14.6, 7.2 Hz, 1H), 1.92 - 1.70 (m,
2H), 1.55 (dt, J = 14.4, 11.5 Hz, 1H), 1.24 - 1.09 (m, 1H).
Example 178: Synthesis of (3R,7S)-N-(2,4-difluorobenzyl)-3-(fluoromethyl)-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(181):
[1076]

[1077] The title compound was prepared in a manner similar to (3R,7S)-3-(fluoromethyl)-12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(180) using methyl 3-(benzyloxy)-5-((2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate
instead of methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate.
MS
(m/
z) 436.19 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) δ 10.37 (d, J = 6.7 Hz, 1H), 8.40 (s, 1H), 7.41 (td, J = 8.8, 6.5 Hz, 1H), 7.01
- 6.85 (m, 2H), 4.73 - 4.61 (m, 1H), 4.58 (m, 4H), 4.52 - 4.41 (m, 1H), 3.78 (dt,
J = 15.0, 2.7 Hz, 1H), 3.66 (dd, J = 15.0, 1.8 Hz, 1H), 2.12 (dt, J = 15.5, 2.3 Hz,
1H), 2.05 (dd, J = 14.6, 7.3 Hz, 1H), 1.92 - 1.69 (m, 2H), 1.56 (dt, J = 14.6, 11.6
Hz, 1H), 1.25 - 1.09 (m, 1H).
Example 179: Preparation of (7S)-N-(3-chloro-2,4-difluorobenzyl)-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(182):
[1078]

[1079] The title compound was prepared in a manner similar to (7S)-N-(3-chloro-2,4-difluorobenzyl)-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(51), except that EDCI was used instead of HATU, DMAP and DIPEA were used instead of TEA,
and (2,4,6-trifluoro-3-methoxy-phenyl)methanamine was used instead of (3-chloro-2,4-difluorophenyl)methanamine.
MS
(m/
z) 452.28 [M+H]
+.
1H NMR (400 MHz, Methanol-d4) δ 8.47 (s, 1H), 6.96 (t, J = 10.0 Hz, 1H), 4.68 (s, 2H),
4.33 (dt, J = 14.9, 8.2 Hz, 1H), 3.97 (s, 1H), 3.94 (s, 3H), 3.74 (d, J = 12.5 Hz,
1H), 3.26 - 3.15 (m, 1H), 2.31 - 1.66 (m, 6H), 1.33 (t, J = 13.0 Hz, 1H).
Example 180: Synthesis of (3S,6S,7S)-N-(2,4-difluorobenzyl)-12-hydroxy-3,6-dimethyl-1,11-dioxo-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(183):
[1080]

Synthesis of 1-(tert-butyldimethylsilyl)but-2-yn-1-ol (183a):
[1081] To a solution of but-2-yn-1-ol (125 g, 1.78 mol, 1.0 eq) in THF (2270 mL) was added
n-BuLi (2.5 M in hexane, 892 mL, 2.23 mol, 1.25 eq) at -78 °C by dropwise under Argon.
The mixture was stirred for 30 mins at 0 °C under Argon. To the mixture was added
a solution of TBS-Cl (335.9 g, 2.23 mol, 1.25 eq) in THF (454 mL) at -78 °C dropwise.
After stirring at room temperature for 16 h,
n-BuLi (998 mL, 2.5 M in hexane, 2.5 mol, 1.4 eq) was added and the reaction mixture
was stirred at -45 °C for 3 h. The reaction was then quenched by addition of AcOH
(856 g) in THF (2.5 L) at -78 °C and then water (3.4 L) was added. The mixture was
warmed to room temperature and extracted with MTBE (4 L×3). The organic phase was
washed with saturated aq. NaHCO
3 (2.2 L×4), brine (2.2 L), dried over Na
2SO
4 and concentrated in vacuo to give crude compound
183a which was directly used into next step without purification.
1H NMR (400 MHz, CDCl
3) δ 4.18 (q,
J= 2.8 Hz, 1 H), 1.88 (d,
J= 2.4 Hz, 3 H), 0.98 (s, 9H), 0.10 (s, 3 H), 0.07 (s, 3 H).
Synthesis of 1-(tert-butyldimethylsilyl)but-2-yn-1-one (183b):
[1082] To a stirred solution of oxalyl chloride (275.4 g, 2.17 mol, 2.0 eq) in dichloromethane
(4000 mL) was added dimethyl sulfoxide (339.0 g, 4.34 mol, 4.0 eq) by dropwise at
-78 °C under N
2. The reaction mixture was stirred for 0.5 h before 1-(tert-butyldimethylsilyl)but-2-yn-1-ol
(183a) (200.0 g, 1.08 mol, 1.0 eq, crude) in dichloromethane (1000 mL) was slowly added.
The mixture was stirred for a further 1 h before triethylamine (548.9 g, 5.42 mol,
5.0 eq) was added. This reaction mixture was stirred at -78 °C for 1 h. HPLC showed
completion. Saturated aq. NH
4Cl (12.0 L) was added below 0 °C and warmed to room temperature. Organic phase was
separated and the aqueous phase was extracted with DCM (4 L × 2). The combined organic
layers were washed with brine (5 L). Dried with Na
2SO
4 and concentrated to give a crude residue (200 g, crude), which was purified by silica
gel column (eluted with PE: EA = 50 :1) to give the product.
1H NMR (400 MHz, CDCl
3) δ 2.10 (s, 3H), 0.97 (s, 9H), 0.23 (s, 6H). MS
(m/
z) 183.20 [M+H]
+.
Synthesis of (S)-1-(tert-butyldimethylsilyl)but-2-yn-1-ol (183c):
[1083] Borane-tetrahydrofuran complex (1 M in THF, 867 mL, 0.867 mol, 5.0 eq) was added
into (
S)-Me-CBS reagent (1 M in PhMe, 347 mL, 0.347 mol, 2.0 eq) by dropwise at -78 °C under
Ar (g). The mixture was stirred for 30 mins at -78 °C under Ar (g). A solution of
1-(tert-butyldimethylsilyl)but-2-yn-1-one
(183b) (50 g, QNMR, 64%, 0.175 mol, 1.0 eq) in THF (900 mL) was added by drop wise. The
mixture was stirred for 30 mins at -78 °C under Argon. Methanol (850 mL) was added
and the solution allowed to stir for an additional 30 mins at -78 °C. Diluted with
MTBE (2 L) and allowed to warm to room temperature. The mixture was washed with saturated
NaHCO
3 (2 L×2), brine (2 L), dried over Na
2SO
4 and concentrated in vacuo. The residue was purified by silica gel column (eluted
with PE: EA = 50 :1) to give the product.
1H NMR (400 MHz, CDCl
3) δ 4.18 (q,
J= 2.8 Hz, 1 H), 1.88 (d,
J= 2.4 Hz, 3 H), 0.98 (s, 9H), 0.10 (s, 3 H), 0.08 (s, 3 H).
Synthesis of (S)-1-(tert-butyldimethylsilyl)but-2-yn-1-yl (tert-butoxycarbonyl)glycinate
(183d):
[1084] To a solution of (S)-1-(tert-butyldimethylsilyl)but-2-yn-1-ol
(183c) (31.0 g, 0.168 mol, 1.0 eq) in dry DCM (626 mL) was added N-Boc-glycine (87.8 g,
0.504 mol, 3.0 eq), 1-ethyl-3-(3-dimethylaminopropyl)-carbodiimide hydrochloride (54.4
g, 0.284 mol, 1.7 eq) and DMAP (1.02 g, 8.35 mmol, 0.05 eq) at 0°C. The reaction mixture
was stirred at 0°C for 2 h. Then concentrated in vacuo and diluted with MTBE (300
mL) and saturated aq NaHCO
3 (300 mL). Separated and washed with saturated aq NaHCO
3 (500 mL) and brine (500 mL). The combined organic phases were dried over Na
2SO
4, concentrated in vacuo to give a crude product (75 g), which was purified by silica
gel column (eluted with PE: EA = 10 :1) to give the product.
1H NMR (400 MHz, CDCl
3) δ 5.29-5.27 (m, 1H), 5.02 (brs, 1H), 3.94-3.91 (m, 2H), 1.85 (d,
J= 2.4 Hz, 3 H), 1.45 (s, 9H), 0.94 (s, 9H), 0.10 (s, 3H), 0.08 (s, 3H). MS
(m/
z) 364.20 [M+Na]
+.
Synthesis of (S,Z)-1-(tert-butyldimethylsilyl)but-2-en-1-yl (tert-butoxycarbonyl)glycinate
(183e):
[1085] To a solution of (S)-1-(tert-butyldimethylsilyl)but-2-yn-1-yl (tert-butoxycarbonyl)glycinate
(183d) (38 g, 0.11 mol) in EtOAc (286 mL) was added Lindlar
's catalyst (Pd/5% wt on CaCO
3, 23.5 g), the mixture was stirred at room temperature under H
2 (1 atm) for overnight. The suspension was filtered on a pad Celite and washed with
DCM. The solvents were removed in vacuo to give crude product, which was purified
by silica gel column (eluting with PE: EA = 10: 1) to give the product.
1H NMR (400 MHz, CDCl
3) δ 5.67 (d,
J = 10.4 Hz, 1 H), 5.57-5.53 (m, 1H), 5.45-5.39 (m, 1 H), 5.02 (brs, 1H), 3.90 (d,
J= 4.8 Hz, 2H), 1.72 (dd,
J = 6.8, 1.2 Hz, 3H), 1.46 (s, 9H), 0.94 (s, 9H), 0.06 (s, 3H), 0.00 (s, 3H).
Synthesis of (2S,3S,E)-2-((tert-butoxycarbonyl)amino)-5-(tert-butyldimethylsilyl)-3-methylpent-4-enoic
acid (183f):
[1086] To a solution of diisopropylamine (46.3 g, 0.45 mol, 4.5 eq) in THF (700 mL) was
added
n-BuLi (2.4 M, 170 mL, 0.40 mol, 4.0 eq) by drop with at - 20 °C under N
2. The mixture was stirred at - 20 °C for 30 mins. Cooled the mixture to - 78 °C. A
solution of (S,Z)-1-(tert-butyldimethylsilyl)but-2-en-1-yl (tert-butoxycarbonyl)glycinate
(183e) (35 g, 0.10 mol, 1.0 eq) in THF (175 mL) was added by dropwise at - 78 °C. ZnCl
2 (1 M in THF, 122 mL, 0.12 mol, 1.13 eq) was added by dropwise at - 78 °C. The mixture
was warmed to room temperature and stirred for overnight. HPLC showed completion.
Adjusted pH = 4 - 5 with 1 N HCl at 0 °C. Extracted with MTBE (200 mL × 2).The organics
was washed with brine (200 mL) Dried over Na
2SO
4, concentrated to give crude product (25 g), which was purified with silica gel column
(eluted with PE: EA = 10 :1) to give the product.
1H NMR (400 MHz, CDCl
3) δ 5.87 (dd,
J = 18.4, 6.8 Hz, 1H), 5.77 (d,
J= 18.4 Hz, 1H), 4.89 (d,
J= 8.4 Hz, 1H), 4.27-4.23 (m, 1H), 2.81-2.77 (m, 1H), 1.45 (s, 9H), 1.12 (d,
J= 6.8 Hz, 3H), 0.85 (s, 9H), 0.01 (s, 6H). MS
(m/
z) 344.20 [M+H]
+.
Synthesis of tert-butyl ((2S,3S,E)-5-(tert-butyldimethylsilyl)-1-hydroxy-3-methyl
pent-4-en-2-yl)carbamate (183g):
[1087] The title compound was prepared in a manner similar to
syn-(±)-benzyl (1-hydroxy-3-methylpent-4-en-2-yl)carbamate
(174c) except using (2S,3S,E)-2-((tert-butoxycarbonyl)amino)-5-(tert-butyldimethylsilyl)-3-methylpent-4-enoic
acid
(183f) instead of syn-(±)-2-(((benzyloxy)carbonyl)amino)-3-methylpent-4-enoic acid
(174b). MS
(m/
z) 330.20 [M+H]
+.
Synthesis of benzyl ((2S,3S,E)-2-(((benzyloxy)carbonyl)amino)-5-(tert-butyldimethylsilyl)-3-methylpent-4-en-1-yl)((S)-but-3-en-2-yl)carbamate
(183h):
[1088] The title compound was prepared in a manner similar to the preparation of a mixture
of benzyl ((2S,3R)-2-(((benzyloxy)carbonyl)amino)-3-methylpent-4-en-1-yl)((S)-but-3-en-2-yl)carbamate
(
173d-1) and benzyl ((2R,3S)-2-(((benzyloxy)carbonyl)amino)-3-methylpent-4-en-1-yl)((S)-but-3-en-2-yl)carbamate
(173d-2) except using tert-butyl ((2S,3S,E)-5-(tert-butyldimethylsilyl)-1-hydroxy-3-methylpent-4-en-2-yl)carbamate
(183g) instead of syn-(±)-benzyl (1-hydroxy-3-methylpent-4-en-2-yl)carbamate
(173c). MS
(m/
z) 517.52 [M+H]
+.
Synthesis of benzyl ((2S,3S)-2-(((benzyloxy)carbonyl)amino)-3-methylpent-4-en-1-yl)((S)-but-3-en-2-yl)carbamate
(183i):
[1089] To a solution of benzyl ((2S,3S,E)-2-(((benzyloxy)carbonyl)amino)-5-(tert-butyldimethylsilyl)-3-methylpent-4-en-1-yl)((S)-but-3-en-2-yl)carbamate
(183h) (933.2 mg, 1.81 mmol) in 1,4-dioxane (15.5 mL) was added 48% aq. HBF
4 (19 mL, 145 mmol) and the resulting mixture was stirred at 70 °C bath. After 22 h,
additional 48% aq. HBF
4 (19 mL, 145 mmol) was added and the resulting mixture was stirred at 70 °C additional
24 h and the cooled to rt. The reaction mixture transferred to a large flask using
some water and was neutralized by cautious addition of solid sodium bicarbonate (~23
g). To the above reaction mixture was added benzyl chloroformate (0.7 mL, 4.77 mmol)
at 0 °C and the resulting mixture was stirred vigorously overnight. The reaction mixture
was diluted with more water (100 mL) and the product was extracted with ethyl acetate
(70 mL × 2). After the extracts were washed with water (50 mL × 1), combined, dried
(MgSO
4), and concentrated, the residue was purified by column chromatography on silica gel
eluting 0-40% ethyl acetate in hexane to get the title compound: MS
(m/
z) 437.50 [M+H]
+.
Synthesis of benzyl (3S,4S,7S)-3-(((benzyloxy)carbonyl)amino)-4,7-dimethyl-2,3,4,7-tetrahydro-1H-azepine-1-carboxylate
(183j):
[1090] The title compound was prepared in a manner similar to benzyl (
3S,4R,7S) and (
3R,4S,7S)-3-(((benzyloxy)carbonyl)amino)-4,7-dimethyl-2,3,4,7-tetrahydro-1H-azepine-1-carboxylate
(
174e-1 and
174e-2) except using benzyl ((2S,3S)-2-(((benzyloxy)carbonyl)amino)-3-methylpent-4-en-1-yl)((S)-but-3-en-2-yl)carbamate
(183i) instead of a mixture of benzyl ((2S,3R)-2-(((benzyloxy)carbonyl)amino)-3-methylpent-4-en-1-yl)((S)-but-3-en-2-yl)carbamate
(
174d-1) and benzyl ((2R,3S)-2-(((benzyloxy)carbonyl)amino)-3-methylpent-4-en-1-yl)((S)-but-3-en-2-yl)carbamate
(174d-2). MS
(m/
z) 409.20 [M+H]
+.
Synthesis of (3S,6S,7S)-12-hydroxy-3,6-dimethyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(183):
[1091] The title compounds was prepared in a manner similar to (3S,6R,7S)-12-hydroxy-3,6-dimethyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(example
176) except using benzyl (3S,4S,7S)-3-(((benzyloxy)carbonyl)amino)-4,7-dimethyl-2,3,4,7-tetrahydro-1H-azepine-1-carboxylate
(183j) as diamine precursor instead of benzyl (3S,4R,7S)-3-(((benzyloxy)carbonyl)amino)-4,7-dimethyl-2,3,4,7-tetrahydro-1H-azepine-1-carboxylate
(174e-1). MS
(m/
z) 448.11 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) δ 10.35 (s, 1H), 8.42 (s, 1H), 6.91 - 6.76 (m, 2H), 5.50 - 5.37 (m, 2H), 5.29 (q,
J = 7.2 Hz, 1H), 4.81 (dt, J = 9.1, 2.4 Hz, 1H), 4.60 (d, J = 5.7 Hz, 2H), 3.86 (dd,
J = 14.4, 2.3 Hz, 1H), 3.70 (dd, J = 14.4, 2.3 Hz, 1H), 3.26 - 3.12 (m, 1H), 1.30
(d, J = 7.1 Hz, 3H), 0.76 (d, J = 7.6 Hz, 3H).
Example 181: Synthesis of (3S,6S,7S)-N-(2,4-difluorobenzyl)-12-hydroxy-3,6-dimethyl-1,11-dioxo-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(184):
[1092]

[1093] The title compound was prepared in a manner similar to (3S,6S,7S)-12-hydroxy-3,6-dimethyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(example
183) except using methyl 3-(benzyloxy)-4-oxo-5-((2,4-difluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate
instead of methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate
. MS
(m/
z) 430.10 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) δ 10.36 (s, 1H), 8.45 (s, 1H), 7.41 (td, J = 9.2, 8.8, 6.5 Hz, 1H), 6.94 (dddd,
J = 11.0, 7.2, 5.4, 2.9 Hz, 2H), 5.49 - 5.37 (m, 2H), 5.30 (q, J = 7.2 Hz, 1H), 4.83
(dt, J = 9.1, 2.4 Hz, 1H), 4.58 (d, J = 5.7 Hz, 2H), 3.87 (dd, J = 14.4, 2.3 Hz, 1H),
3.72 (dd, J = 14.4, 2.3 Hz, 1H), 3.26 - 3.12 (m, 1H), 1.31 (d, J = 7.2 Hz, 3H), 0.77
(d, J = 7.6 Hz, 3H).
19F NMR (376 MHz, Acetonitrile-d
3) δ -77.34, -114.07 (ddd, J = 15.6, 8.9, 6.9 Hz), -116.46 - - 116.74 (m).
Example 182: Preparation of (7S)-10-(5-(2,4-difluorobenzyl)-1,3,4-thiadiazol-2-yl)-12-hydroxy-4,5,6,7-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-1,11-dione
(185):
[1094]

Step 1: Synthesis of tert-butyl 2-(2-(2,4-difluorophenyl)acetyl)hydrazine-1-carboxylate
(185a):
[1095] To a mixture of 2-(2,4-difluorophenyl)acetic acid (1.62g, 9.22 mmol) and tert-butyl
carbazate (1.30g, 9.68 mmol) in DMF (15.0 mL) at room temperature was added 1-hydroxybenzotriazole
hydrate (1.73g, 11.1 mmol) and 1-(3-dimethylaminopropyl)-3-ethylcarbodiimide HCl (1.72g,
11.1 mmol). The mixture was stirred for overnight. The reaction was then quenched
with saturated sodium bicarbonate solution. After being stirred for 10 min, the precipitate
was collected by filtration. The solid was washed with water, then a 1:1 mixture of
ether/hexane, followed by hexane to give the product (2.0g). MS (
m/
z) 288.06 [M+H]
+.
Step 2: Synthesis of tert-butyl 2-(2-(2,4-difluorophenyl)ethanethioyl)hydrazine-1-carboxylate
(185b):
[1096] Tert-butyl 2-(2-(2,4-difluorophenyl)acetyl)hydrazine-1-carboxylate
(185a) (2.0g, 6.99 mmol) was suspended in THF (79 mL) at room temperature and treated with
Lawsson's reagent (8.5g, 21.0 mmol). The resulting mixture was heated to 50 °C for
18 hrs. The reaction was quenched with saturated sodium bicarbonate, extracted with
EtOAc twice. Combined organic layer was dried over sodium sulfate, filtered and concentrated.
The residue was purified by Combiflash (40 g silica gel, 0-100% EtOAc/Hexanes). Desired
fractions were pooled and concentrated to give a light yellowish oil (400 mg). MS
(m/
z) 303.18 [M+H]
+.
Step 3: Synthesis of 2-(2,4-difluorophenyl)ethanethiohydrazide (185c):
[1097] Tert-butyl 2-(2-(2,4-difluorophenyl)ethanethioyl)hydrazine-1-carboxylate
(185b) (400mg, 1.32 mmol) was dissolved in DCM (10.0 mL) and treated with 4 N HCl in 1,4-dioxane
(10.0 mL) at room temperature for 30 min. The reaction was concentrated, re-dissolved
in DMF, filtered and purified by Gilson HPLC (Gemini, 5 - 100% ACN/H
2O + 0.1% TFA) to give title compound as a TFA salt after lyophilization. MS
(m/
z) 203.09 [M+H]
+.
Step 4: Synthesis of (7S)-N'-(2-(2,4-difluorophenyl)ethanethioyl)-12-methoxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carbohydrazide
(185d):
[1098] To the solution of (1S)-6-methoxy-5,8-dioxo-2,9-diazatricyclo[7.4.1.02,7]tetradeca-3,6-diene-4-carboxylic
acid
(39a) (50.2 mg, 0.172 mmol) in a mixture of THF (1.72 mL) and DMF (0.3 mL) at 0 °C was
added N-methyl morpholine (69.4 mg, 0.687 mmol) followed by isobutyl chloroformate
(56.3 mg, 0.412 mmol). After stirred at 0 °C for 1 hr, 2-(2,4-difluorophenyl)ethanethiohydrazide
TFA salt
(185c) (65.2mg, 0.206 mmol) was added followed by additional N-methyl morpholine (69.4 mg,
0.687 mmol). The reaction was removed from the cooling bath and stirred at room temperature
for 3 hrs. The reaction was then diluted with EtOAc (20 mL), washed with saturated
sodium bicarbonate, brine, dried over sodium sulfate, filtered and concentrated to
give the product. The crude material was purified by Gilson HPLC (Gemini, 5 - 100%
ACN/H
2O + 0.1% TFA) to give title compound after lyophilization. MS
(m/
z) 477.13 [M+H]
+.
Step 5: Synthesis of (7S)-10-(5-(2,4-difluorobenzyl)-1,3,4-thiadiazol-2-yl)-12-methoxy-4,5,6,7-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-1,11-dione
(185e):
[1099] (7S)-N'-(2-(2,4-Difluorophenyl)ethanethioyl)-12-methoxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carbohydrazide
(185d) (81 mg, 0.17 mmol) was heated at 100 °C in acetic acid (0.3 mL) for 7 hrs. The reaction
was cooled to rt, diluted with DMF, filtered and purified by Gilson HPLC (Gemini,
5 - 100% ACN/H
2O + 0.1% TFA) to give title compound after lyophilization. MS
(m/
z) 459.35 [M+H]
+.
Step 6: Synthesis of (7S)-10-(5-(2,4-difluorobenzyl)-1,3,4-thiadiazol-2-yl)-12-hydroxy-4,5,6,7-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-1,11-dione
(185):
[1100] (7S)-10-(5-(2,4-difluorobenzyl)-1,3,4-thiadiazol-2-yl)-12-methoxy-4,5,6,7-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-1,11-dione
(185d) (15.0 mg, 0.0327 mmol) was dissolved in DMF (0.25 mL) and treated with lithium chloride
(13.9 mg, 0.327 mmol) at 100 °C for 2 hrs. The reaction was cooled to rt, diluted
with DMF, filtered and purified by Gilson HPLC (Gemini, 5 - 100% ACN/H
2O + 0.1% TFA) to give title compound after lyophilization. MS
(m/
z) 445.35 [M+H]
+.
1H NMR (400 MHz, Methanol-d4) δ 8.87 (s, 1H), 7.55 - 7.40 (m, 1H), 7.09 - 6.90 (m,
2H), 4.71-4.84 (m, 1H), 4.51 (s, 2H), 4.35 (dt, J = 13.4, 8.1 Hz, 1H), 4.13 - 3.96
(m, 1H), 3.84 - 3.67 (m, 1H), 3.23 (ddd, J = 13.2, 6.9, 2.6 Hz, 1H), 2.27 - 2.02 (m,
3H), 2.02 - 1.74 (m, 2H), 1.35 (q, J = 11.3 Hz, 1H).
Example 183: Synthesis of (3S,6S,7S)-12-hydroxy-3,6-dimethyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(186):
[1101]

[1102] The title compounds was prepared in a manner similar to (3S,6R,7S)-12-hydroxy-3,6-dimethyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(174) except using benzyl (3S,4S,7S)-3-
(((benzyloxy)carbonyl)amino)-4,7-dimethyl-2,3,4,7-tetrahydro-1H-azepine-1-carboxylate (
183j) instead of benzyl (3S,4R,7S)-3-(((benzyloxy)carbonyl)amino)-4,7-dimethyl-2,3,4,7-tetrahydro-1H-azepine-1-carboxylate
(
174e-1). MS
(m/
z) 450.11 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) δ 10.42 (s, 1H), 8.29 (s, 1H), 6.92 - 6.75 (m, 2H), 4.71 - 4.46 (m, 3H), 4.39 (dt,
J = 4.9, 2.2 Hz, 1H), 3.69 (dd, J = 14.8, 2.9 Hz, 1H), 3.61 (dd, J = 14.8, 1.8 Hz,
1H), 2.13 - 1.98 (m, 2H), 1.60 - 1.41 (m, 2H), 1.20 (d, J = 6.7 Hz, 3H), 0.96 (dt,
J = 15.5, 11.9 Hz, 1H), 0.86 (d, J = 7.0 Hz, 3H).
Example 184: Synthesis of (3S,6S,7S)-N-(2,4-difluorobenzyl)-12-hydroxy-3,6-dimethyl-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(187):
[1103]

[1104] The title compounds was prepared in a manner similar to synthesis of (3S,6S,7S)-12-hydroxy-3,6-dimethyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(example
186) except using methyl 3-(benzyloxy)-4-oxo-5-((2,4-difluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate
instead of 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate.
MS
(m/
z) 432.11 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) δ 10.43 (s, 1H), 8.30 (s, 1H), 7.41 (d, J = 7.8 Hz, 1H), 6.93 (d, J = 9.5 Hz, 2H),
4.57 (s, 3H), 4.40 (s, 1H), 3.70 (d, J = 14.8 Hz, 1H), 3.62 (d, J = 14.7 Hz, 1H),
2.15 - 1.97 (m, 2H), 1.61 - 1.40 (m, 2H), 1.21 (d, J = 6.5 Hz, 3H), 1.16 - 0.91 (m,
1H), 0.87 (d, J = 6.9 Hz, 3H).
Example 185: Preparation of (3R,7S)-12-(benzyloxy)-N-(2,4-difluorobenzyl)-3-(fluoromethyl)-1,11-dioxo-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(188):
[1105]

Synthesis of ((2R,6S)-6-aminoazepan-2-yl)methanol (188a):
[1106] Trifluoacetic acid (2 mL) was added to benzyl (3S,7R)-3-(((benzyloxy)carbonyl) amino)-7-(((tert-butyldimethylsilyl)oxy)methyl)-2,3,4,7-tetrahydro-1H-azepine-1-carboxylate
(82 mg,0.156 mmol) and the reaction was heated to 80 °C for 3 hours. The reaction
mixture was concentrated down. The crude was used directly in next step. MS
(m/
z): 143.10 [M+H]
+.
Synthesis of (3R,7S)-12-(benzyloxy)-N-(2,4-difluorobenzyl)-3-(hydroxymethyl)-1,11-dioxo-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(188b):
[1107] Added methanol (4 mL) to methyl 3-(benzyloxy)-4-oxo-5-((2,4-difluorobenzyl) carbamoyl)-4H-pyran-2-carboxylate
(66 mg, 0.156 mmol) and ((2R,6S)-6-aminoazepan-2-yl) methanol
(191a). At r.t., NaHCO
3(260 mg, 3.09 mmol) was added to the reaction mixture. The reaction was stirred at.
r.t. overnight, then heat to 50 °C for 4 hours. The reaction mixture was concentrated
down, then added ethyl acetate, washed with saturated ammonium chloride solution.
The organic layer was concentrated and purified via silica chromatograph to give (3R,7S)-12-(benzyloxy)-N-(2,4-difluorobenzyl)-3-(hydroxymethyl)-1,11-dioxo-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide.
MS
(m/
z) 522.2 [M+H]
+.
Synthesis of (3R,7S)-12-(benzyloxy)-N-(2,4-difluorobenzyl)-3-(fluoromethyl)-1,11-dioxo-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(188c):
[1108] Deoxo-Fluor (15 mg, 2 eq.) was added to (3R,7S)-12-(benzyloxy)-N-(2,4-difluorobenzyl)-3-(hydroxymethyl)-1,11-dioxo-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(18 mg, 0.034 mmol) at 0 °C, then the reaction was kept at r.t. for 4 hours. The reaction
mixture was concentrated down, then add ethyl acetate, washed with saturated ammonium
chloride solution. The organic layer was concentrated and purified via silica chromatograph
to give (3R,7S)-12-(benzyloxy)-N-(2,4-difluorobenzyl)-3-(fluoromethyl)-1,11-dioxo-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide.
MS
(m/
z) 524.2 [M+H]
+.
Synthesis of (3R,7S)-12-(benzyloxy)-N-(2,4-difluorobenzyl)-3-(fluoromethyl)-1,11-dioxo-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(188):
[1109] (3R,7S)-12-(Benzyloxy)-N-(2,4-difluorobenzyl)-3-(fluoromethyl)-1,11-dioxo-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(188c) (8 mg, 0.015mmol) was dissolved in toluene (1 mL) and then TFA (1 mL) was added.
The reaction was stirred at r.t. for overnight. The reaction mixture was concentrated
down, purified via preparative HPLC, eluting 10-60% acetonitrile (0.1% TFA) in water
(0.1% TFA). Combined fractions were freeze-dried to afford the title compound. MS
(m/
z) 434.10 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d3) δ 10.31 (s, 1H), 8.42 (s, 1H), 7.53 -7.31 (m, 1H),
7.07-6.90 (m, 2H), 5.89-5.74 (m, 1H), 5.58 (dt, J = 11.6, 2.5Hz, 1H), 5.46 (d, J =
23.1 Hz, 1H), 4.73 (d, J = 5.4 Hz, 2H), 4.61 (dd, J = 5.6, 3.1 Hz, 2H), 3.98 (dd,
J = 14.4, 2.8 Hz, 1H), 3.82 - 3.69 (m, 1H), 2.99 (dt, J = 17.5, 8.8 Hz, 2H), 2.45
- 2.33 (m, 1H).
Example 186: Preparation of (3R,7S)-N-(2,4-difluorobenzyl)-3-(difluoromethyl)-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(189):
[1110]

Synthesis of (3R,7S)-12-(benzyloxy)-N-(2,4-difluorobenzyl)-3-formyl-1,11-dioxo-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(189a):
[1111] Added Dess Martin periodinane (73 mg, 1.2 eq.) to (3R,7S)-12-(benzyloxy)-N-(2,4-difluorobenzyl)-3-(hydroxymethyl)-1,11-dioxo-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(189b) (75 mg, 0.1444 mmol) at 0 °C. Then the reaction was warmed up to r.t.. The reaction
was stirred at r.t. for 2 hours. The reaction mixture was concentrated down, then
added ethyl acetate, washed with saturated ammonium chloride solution. The organic
layer was concentrated and purified via silica chromatograph (eluting with 5% MeOH/DCM)
to give (3R,7S)-12-(benzyloxy)-N-(2,4-difluorobenzyl)-3-formyl-1,11-dioxo-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide.
MS
(m/
z) 520.2 [M+H]
+.
Synthesis of (3R,7S)-12-(benzyloxy)-N-(2,4-difluorobenzyl)-3-(difluoromethyl)-1,11-dioxo-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(189b):
[1112] Added Deoxo-Fluor (126 mg, 4 eq.) to (3R,7S)-12-(benzyloxy)-N-(2,4-difluorobenzyl)-3-formyl-1,11-dioxo-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(189a) in 1 mL DCM solution at 0 °C. The reaction was kept at 0 °C for one hour. The reaction
mixture was concentrated down, then added ethyl acetate, washed with saturated sodium
bicarbonate solution. The organic layer was concentrated and purified via preparative
HPLC, eluting with 10-60% acetonitrile (0.1% TFA) in water (0.1% TFA) to give (3R,7S)-12-(benzyloxy)-N-(2,4-difluorobenzyl)-3-(difluoromethyl)-1,11-dioxo-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide.
MS (m/z) 542.1 [M+H]
+.
Synthesis of (3R,7S)-N-(2,4-difluorobenzyl)-3-(difluoromethyl)-12-hydroxy-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyridor[1,2-a][1,4]diazonine-10-carboxamide (189):
[1113] (3R,7S)-12-(benzyloxy)-N-(2,4-difluorobenzyl)-3-(difluoromethyl)-1,11-dioxo-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(189b) (8 mg, 0.015 mmol) was dissolved in ethanol, ethyl acetate mixture (10 mL), and 10%
Palladium on carbon (3 mg) was added. Hydrogen atmosphere was applied with a balloon.
After 2 hours, the reaction mixture was filtered through celite. The filtrate was
concentrated down and purified via preparative HPLC, eluting with 10-60% acetonitrile
(0.1% TFA) in water (0.1% TFA). Combined fractions were freeze-dried to afford the
title compound. MS
(m/
z) 454.10 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d3) d 10.35 (s, 1H), 8.42 (s, 1H), 7.63 - 7.33 (m, 1H),
6.97 (td, J = 9.6, 7.8, 3.5 Hz, 2H), 6.06 (td, J = 55.0, 3.5 Hz, 1H), 4.81 - 4.54
(m, 3H), 3.94 - 3.68 (m, 3H), 2.27 - 2.06 (m, 2H), 1.91 - 1.64 (m, 3H), 1.30 - 1.03
(m, 1H).
Example 187: Preparation of (6S)-12-hydroxy-6-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(190):
[1114]

Synthesis of tert-butyl ((2S,3S)-5-(tert-butyldimethylsilyl)-3-methyl-1-oxopent-4-en-2-yl)carbamate
(190a):
[1115] The title compound was prepared in a manner similar to benzyl (1-oxopent-4-en-2-yl)carbamate
(42b) using tert-butyl ((2S,3S)-5-(tert-butyldimethylsilyl)-1-hydroxy-3-methylpent-4-en-2-yl)carbamate
(183g) instead of benzyl (1-hydroxypent-4-en-2-yl)carbamate
(42a). MS
(m/
z): 328.90 [M+H]
+.
Synthesis of benzyl allyl((3S)-2-((tert-butoxycarbonyl)amino)-5-(tert-butyldimethylsilyl)-3-methylpent-4-en-1-yl)carbamate
(190b):
[1116] The title compound was prepared in a manner similar to benzyl (1-(allylamino)pent-4-en-2-yl)carbamate
(42c) using tert-butyl ((2S,3S)-5-(tert-butyldimethylsilyl)-3-methyl-1-oxopent-4-en-2-yl)carbamate
(193a) instead of benzyl (1-oxopent-4-en-2-yl)carbamate
(42b). MS
(m/
z): 369.30 [M+H]
+.
Synthesis of (3S)-N1-allyl-3-methylpent-4-ene-1,2-diamine (190c):
[1117] To a solution of benzyl allyl((2S,3S)-2-((tert-butoxycarbonyl)amino)-5-(tert-butyldimethylsilyl)-3-methylpent-4-en-1-yl)carbamate
(190b) (1.23 g, 3.34 mmol) in 20 mL of 1,4-dioxane was added tetrafluoroboric acid (48%
aqueous solution, 21.8 mL, 167 mmol), and the resulting mixture was stirred at 70
°C bath for overnight. Added additional tetrafluoroboric acid (48% aqueous solution,
21.8 mL, 167 mmol and stirred at 70 °C for additional 24 hours and cooled to room
temperature. The reaction mixture was transferred to an Erlenmeyer flask (500 mL)
using some water, and stirred as solid NaHCO
3 were added until the reaction mixture was not acidic. The resulting mixture was used
as such in the next step. MS
(m/
z): 155.20 [M+H]
+.
Synthesis of benzyl allyl((3S)-2-(((benzyloxy)carbonyl)amino)-3-methylpent-4-en-1-yl)carbamate
(190d):
[1118] To the above reaction mixture was added benzyl chloroformate (2.45 mL, 16.7 mmol)
at 0 °C and the resulting mixture was stirred vigorously overnight. The reaction mixture
was filtered to remove solid; the filtrate was extracted with EtOAc. After the extracts
were washed with water, combined, dried (MgSO
4), concentrated, the residue was purified by Silica gel chromatography eluting with
EtOAc in hexane to afford the title product. MS
(m/
z): 423.20 [M+H]
+.
Synthesis of (4S)-4-methylazepan-3-amine (190e):
[1119] The title compound was prepared in a manner similar to benzyl-3-(((benzyloxy)carbonyl)amino)azepane-1-carboxylate
(
42e-1 and
42e-2) except using benzyl allyl((3S)-2-(((benzyloxy)carbonyl)amino)-3-methylpent-4-en-1-yl)carbamate
(190d) instead of benzyl allyl(2-(((benzyloxy)carbonyl)amino)pent-4-en-1-yl)carbamate
(42d). MS (
m/
z): 128.23 [M+H]
+.
Synthesis of (6S)-12-hydroxy-6-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(190):
[1120] The title compound was prepared in a manner similar to N-(2,4-difluorobenzyl)-5-hydroxy-4,6-dioxo-1,1a,2,4,6,10,11,11a-octahydro-3,10-methanocyclopropa[f]pyrido[1,2-a][1,4]diazonine-7-carboxamide
(42-1) except using (4S)-4-methylazepan-3-amine
(190e) and methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate
instead of
42g-1 and methyl 3-benzyloxy-5-[(2,4-difluorophenyl)methylcarbamoyl]-4-oxo-pyran-2-carboxylate).
MS
(m/
z) 436.10 [M+H]
+.
1H NMR (400 MHz, DMSO-
d6) δ 10.42 (q,
J = 5.5 Hz, 1H), 8.49 (s, 0.6 H) 8.41 (s, 0.4 H), 7.21 (dd,
J= 9.2, 7.7 Hz, 2H), 4.74 - 4.29 (m, 3H), 4.13 (dd,
J = 13.2, 7.4 Hz, 1H), 3.90 (d,
J = 2.9 Hz, 1H), 3.85 - 3.65 (m, 1H), 3.07 (ddd,
J = 39.9, 12.8, 6.5 Hz, 1H), 2.12 - 1.16 (m, 5H), 0.98 (dd,
J = 110.7, 7.0 Hz, 3H).
Example 188: Preparation of (6R)-9,10-difluoro-1-hydroxy-6-methyl-2,14-dioxo-N-(2,4,6-trifluorobenzyl)-2,7,12,14-tetrahydro-6H-6,13-methanobenzo[f]pyrido[1,2-a][1,4]diazonine-3-carboxamide
and (6S)-9,10-difluoro-1-hydroxy-6-methyl-2,14-dioxo-N-(2,4,6-trifluorobenzyl)-2,7,12,14-tetrahydro-6H-6,13-methanobenzo[f]pyrido[1,2-a][1,4]diazonine-3-carboxamide
(191-1 and 191-2):
[1121]

Synthesis of (2-bromo-4,5-difluorophenyl)methanol (191a):
[1122] To a solution of 2-bromo-4,5-difluorobenzoic acid (100 g, 421 mmol) in THF (500 mL)
under N
2 (g) was added 10 M borane-methyl sulfide (50.6 mL, 506 mmol) over 25 min. The reaction
mixture was heated to 80 °C for 3 h and cooled to rt. 2 N HCl (300 mL) was added dropwise
over 1 h and left to stir for an additional 1 h. The mixture was extracted with EtOAc
(3x) and the combined organic phase was washed with brine (1×). The organic phase
was dried over Na
2SO
4, filtered, and concentrated to afford (2-bromo-4,5-difluorophenyl)methanol, which
was used without further purification.
1H NMR (400 MHz, CDCl
3) δ 7.38 (m, 2H), 4.68 (s, 2H).
Synthesis of 1-((benzyloxy)methyl)-2-bromo-4,5-difluorobenzene (191b):
[1123] A solution of (2-bromo-4,5-difluorophenyl)methanol (123 g, 551 mmol) in THF (861
mL) was placed under N
2 and cooled to 0 °C. 60% sodium hydride (26.4 g, 661 mmol) was added and the reaction
mixture was stirred for 1 h. A solution of benzyl bromide (94.3 g, 551 mmol) in THF
(65 mL) was added dropwise and the reaction was warmed to rt. After 16 h, the reaction
mixture was poured into ice and extracted with EtOAc (3x). The combined organic phase
was washed with 10% citric acid (2x) and brine (1x), dried over Na
2SO
4, filtered, and concentrated to afford 1-((benzyloxy)methyl)-2-bromo-4,5-difluorobenzene,
which was used without further purification.
1H NMR (400 MHz, CDCl
3) δ 7.20 (m, 7H), 4.47 (s, 2H), 4.36 (s, 2H).
Synthesis of 2-((benzyloxy)methyl)-4,5-difluorobenzonitrile (191c):
[1124] To a solution of 1-((benzyloxy)methyl)-2-bromo-4,5-difluorobenzene (100 g, 319 mmol)
in NMP (1 L) was added CuCN (85.8 g, 958 mmol). The reaction mixture was heated to
150 °C for 21 h. After cooling to rt, water was added and the mixture was extracted
with EtOAc (3x). The combined organic phase was washed with brine (1x), dried over
Na
2SO
4, filtered, and concentrated to provide 2-((benzyloxy)methyl)-4,5-difluorobenzonitrile,
which was used in the next step without further purification.
1H NMR (400 MHz, CDCl
3) δ 7.45 (m. 7H), 4.68 (d,
J= 10.8 Hz, 4H).
Synthesis of (2-((benzyloxy)methyl)-4,5-difluorophenyl)methanamine (191d):
[1125] To a suspension of 2-((benzyloxy)methyl)-4,5-difluorobenzonitrile (80.0 g, 308 mmol)
and NiCl
2·6H
2O (73.4 g, 308 mmol) in MeOH (1.2 L) at 0 °C was added NaBH
4 (35.0 g, 923 mmol) portion-wise over 1 h. The reaction mixture was warmed to rt and
stirred for 1 h. 5% HCl was added and the mixture was stirred for 1 h. Na
2CO
3 was added to basify and the mixture was filtered. The filtrate was extracted with
EtOAc (3x) and the combined organic phase was dried over Na
2SO
4 and concentrated to afford (2-((benzyloxy)methyl)-4,5-difluorophenyl) methanamine,
which was used without further purification.
Synthesis of tert-butyl (2-((benzyloxy)methyl)-4,5-difluorobenzyl)carbamate (191e):
[1126] To a solution of (2-((benzyloxy)methyl)-4,5-difluorophenyl)methanamine (77.4 g, 293
mmol) in CH
2Cl
2 (542 mL) was added triethylamine (102.3 mL, 735 mmol). The reaction mixture was cooled
to 0 °C and Boc
2O (128 g, 135.07 mmol) was added. The reaction mixture was warmed to rt and stirred
for 5 h. Water was added and the mixture was extracted with CH
2Cl
2 (3x). The combined organic phase was dried over Na
2SO
4, filtered, and concentrated to afford tert-butyl (2-((benzyloxy)methyl)-4,5-difluorobenzyl)carbamate,
which was used without further purification.
1H NMR (400 MHz, CDCl
3) δ 7.26 (m, 5H), 7.08 (m, 2H), 4.95 (s, 1H), 4.48 (s, 2H), 4.42 (s, 2H), 4.18 (d,
J = 6.0 Hz, 2H), 1.35 (s, 9H).
Synthesis of tert-butyl (4,5-difluoro-2-(hydroxymethyl)benzyl)carbamate (191f):
[1127] To a mixture of tert-butyl (2-((benzyloxy)methyl)-4,5-difluorobenzyl)carbamate (54.7
g, 151 mmol) and 10% Pd/C (5.47 g) was added THF (820 mL). The suspension was placed
under 35 psi of H
2 (g) and stirred for 16 h. An additional portion of Pd/C (5.0 g) was added and the
reaction mixture was stirred under 35 psi of H
2 (g) for an additional 36 h. The reaction mixture was filtered and concentrated to
provide tert-butyl (4,5-difluoro-2-(hydroxymethyl)benzyl)carbamate, which was used
without further purification.
1H NMR (400 MHz, CDCl
3) δ 7.17 (m, 2H), 5.10 (s, 1H), 4.67 (d, J = 4.8 Hz, 2H), 4.30 (d, J = 6.0 Hz, 2H),
1.46 (s, 10H).
Synthesis of tert-butyl (2-(chloromethyl)-4,5-difluorobenzyl)carbamate (191g):
[1128] To a suspension of tert-butyl (4,5-difluoro-2-(hydroxymethyl)benzyl)carbamate (35.2
g, 128 mmol) in CH
2Cl
2 (350 mL) was added Et
3N (39.1 g, 386 mmol) and methanesulfonyl chloride (17.7 g, 154 mmol). After stirring
for 1 h, the reaction mixture was poured into water and extracted with CH
2Cl
2 (3x). The combined organic phase was washed with brine, dried over Na
2SO
4, filtered, and concentrated to afford tert-butyl (2-(chloromethyl)-4,5-difluorobenzyl)carbamate,
which was used without further purification.
1H NMR (400 MHz, CDCl
3) δ 7.18 (m, 2H), 4.98 (s, 1H), 4.58 (s, 2H), 4.37 (d, J = 6.0 Hz, 2H), 1.47 (s, 9H).
Synthesis of dimethyl 2-(2-(((tert-butoxycarbonyl)amino)methyl)-4,5-difluorobenzyl)malonate
(191h):
[1129] To a suspension of 60% sodium hydride (6.20 g, 155 mmol) in THF (750 mL) was added
dimethyl malonate (20.5 g, 155 mmol). At 0 °C, a solution of tert-butyl (2-(chloromethyl)-4,5-difluorobenzyl)carbamate
(37.7 g, 129 mmol) in THF (260 mL) was added and left to stir for 16 h. Acetic acid
was added to acidify to pH 5 and water was added. The mixture was extracted with EtOAc
(3x) and the combined organic phase was washed with saturated aqueous NaHCO
3. The organic phase was dried over Na
2SO
4, filtered, and concentrated to afford dimethyl 2-(2-(((tert-butoxycarbonyl)amino)methyl)-4,5-difluorobenzyl)malonate,
which was used without further purification. MS (m/z) 288.0 [M-Boc+H]
+.
Synthesis of dimethyl 2-(2-(aminomethyl)-4,5-difluorobenzyl)malonate hydrochloride
(191i):
[1130] To a solution of dimethyl 2-(2-(((tert-butoxycarbonyl)amino)methyl)-4,5-difluorobenzyl)malonate
(31.8 g, 82.0 mmol) in EtOAc (320 mL) was added 4 M HCl in EtOAc (160 mL) dropwise.
After 3 h, the reaction mixture was concentrated to afford dimethyl 2-(2-(aminomethyl)-4,5-difluorobenzyl)malonate
hydrochloride, which was used without further purification.
1H NMR (400 MHz, CD
3OD) δ 7.17 (dd, J = 11.0, 8.0 Hz, 1H), 7.06 (dd, J = 11.0, 8.0 Hz, 1H), 4.00 (s, 2H),
3.67 (t, J = 8.0 Hz, 1H), 3.45 (s, 7H), 3.04 (m, 3H).
Synthesis of methyl 7,8-difluoro-3-oxo-2,3,4,5-tetrahydro-1H-benzo[c]azepine-4-carboxylate
(191j):
[1131] To a solution of dimethyl 2-(2-(aminomethyl)-4,5-difluorobenzyl)malonate hydrochloride
(23.9 g, 73.8 mmol) in MeOH (168 mL) was added triethylamine (11.2 g, 111 mmol). The
reaction mixture was stirred at 50 °C for 5 h and concentrated to afford methyl 7,8-difluoro-3-oxo-2,3,4,5-tetrahydro-1H-benzo[c]azepine-4-carboxylate,
which was used without further purification. MS (m/z) 256.0 [M+H]
+.
1H NMR (400 MHz, CDCl
3) δ 7.03 (q, J = 10.8, 8.0 Hz, 1H), 6.95 (dd, J = 10.4, 7.6 Hz, 1H), 6.82 (s, 1H),
4.72 (dd, J = 4.8 Hz, 1H), 4.17 (dd, J = 16.0, 6.0 Hz, 1H), 3.99 (dd, J = 11.6, 4.4
Hz, 1H), 3.79 (s, 3H), 3.40 (m, 1H), 3.18 (dd, J = 5.2 Hz, 1H).
Synthesis of methyl 7,8-difluoro-4-methyl-3-oxo-2,3,4,5-tetrahydro-1H-benzo[c]azepine-4-carboxylate
(191k):
[1132] To a solution of methyl 7,8-difluoro-3-oxo-2,3,4,5-tetrahydro-1H-benzo[c]azepine-4-carboxylate
(3.0 g, 11.8 mmol) in THF (36 mL) at -78 °C was added 2.5 M
n-BuLi in hexanes (4.7 mL, 11.8 mmol). The reaction mixture was warmed to rt for 10
min then cooled to -78 °C. Iodomethane (0.73 mL, 11.8 mmol) was added and the reaction
was allowed to warm to rt overnight. Saturated aqueous NH
4Cl was added and the mixture was extracted with EtOAc (2x). The combined organic phase
was dried over Na
2SO
4, filtered, concentrated, and purified by column chromatography (0-100% EtOAc/heptane)
to afford methyl 7,8-difluoro-4-methyl-3-oxo-2,3,4,5-tetrahydro-1H-benzo[c]azepine-4-carboxylate.
MS (m/z) 270.09 [M+H]
+.
Synthesis of 7,8-difluoro-4-methyl-3-oxo-2,3,4,5-tetrahydro-1H-benzo[c]azepine-4-carboxylic
acid (191l):
[1133] To a flask containing methyl 7,8-difluoro-4-methyl-3-oxo-2,3,4,5-tetrahydro-1H-benzo[c]azepine-4-carboxylate
(1.19 g, 4.41 mmol) was added 1:1 THF/water (30 mL) and LiOH·H
2O (0.56 g, 13.2 mmol). The reaction mixture was stirred at rt for 6 h, acidified with
1 M HCl, and extracted with EtOAc (2x). The combined organic phase was dried over
Na
2SO
4, filtered, and concentrated to afford 7,8-difluoro-4-methyl-3-oxo-2,3,4,5-tetrahydro-1H-benzo[c]azepine-4-carboxylic
acid, which was used without further purification. MS (
m/
z) 256.02 [M+H]
+.
Synthesis of tert-butyl (7,8-difluoro-4-methyl-3-oxo-2,3,4,5-tetrahydro-1H-benzo[c]azepin-4-yl)carbamate (191m):
[1134] To a solution of 7,8-difluoro-4-methyl-3-oxo-2,3,4,5-tetrahydro-1H-benzo[c]azepine-4-carboxylic
acid (1.06 g, 4.15 mmol) in
t-BuOH (25 mL) was added triethylamine (1.04 mL, 7.48 mmol) and DPPA (1.35 mL, 6.23
mmol). The reaction mixture was stirred at rt for 1 h then heated to 90 °C for 16
h. After cooling to rt, EtOAc was added and the solution was washed with water, 1
N HCl, and saturated aqueous NaHCO
3. The organic phase was dried over Na
2SO
4, filtered, concentrated, and purified by column chromatography (0-100% EtOAc/heptane)
to provide tert-butyl (7,8-difluoro-4-methyl-3-oxo-2,3,4,5-tetrahydro-1H-benzo[c]azepin-4-yl)carbamate.
MS (
m/
z) 326.88 [M+H]
+.
Synthesis of tert-butyl (7,8-difluoro-4-methyl-2,3,4,5-tetrahydro-1H-benzo[c]azepin-4-yl)carbamate (191n):
[1135] To a solution of tert-butyl (7,8-difluoro-4-methyl-3-oxo-2,3,4,5-tetrahydro-1H-benzo[c]azepin-4-yl)carbamate
(0.286 g, 0.875 mmol) in THF (22 mL) at 0 °C was added 1 M borane-THF solution (3.50
mL, 3.50 mmol). The reaction mixture was allowed to warm to rt and stir for 2 h. The
reaction mixture was cooled to 0 °C and quenched with MeOH. After 5 min, the mixture
was concentrated, diluted with EtOAc, and washed with 1 M NaOH. The aqueous phase
was extracted with EtOAc and the combined organic phase was dried over Na
2SO
4, filtered, and concentrated to afford tert-butyl (7,8-difluoro-4-methyl-2,3,4,5-tetrahydro-1H-benzo[c]azepin-4-yl)carbamate,
which was used in the next step without further purification. MS
(m/
z) 312.97 [M+H]
+.
Synthesis of 7,8-difluoro-4-methyl-2,3,4,5-tetrahydro-1H-benzo[c]azepin-4-amine (191o):
[1136] To a solution of tert-butyl (7,8-difluoro-4-methyl-2,3,4,5-tetrahydro-1H-benzo[c]azepin-4-yl)carbamate
(0.096 g, 0.306 mmol) in CH
2Cl
2 (2 mL) was added TFA (0.70 mL, 9.18 mmol) at rt. The reaction mixture was stirred
for 3 h and concentrated to afford 7,8-difluoro-4-methyl-2,3,4,5-tetrahydro-1H-benzo[c]azepin-4-amine,
which was used in the next step without further purification. MS (
m/
z) 213.02 [M+H]
+.
Synthesis of 1-(benzyloxy)-9,10-difluoro-6-methyl-2,14-dioxo-N-(2,4,6-trifluorobenzyl)-2,7,12,14-tetrahydro-6H-6,13-methanobenzo[f]pyrido[1,2-a][1,4]diazonine-3-carboxamide
(191p):
[1137] To a solution of 7,8-difluoro-4-methyl-2,3,4,5-tetrahydro-1H-benzo[c]azepin-4-amine
(0.065 g, 0.306 mmol) and methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate
(0.137 g, 0.306 mmol) in 6:1 THF/EtOH (3.5 mL) was added triethylamine (3.17 mL, 22.8
mmol). The reaction mixture was stirred at rt for 16 h and concentrated. The residue
was purified by column chromatography (20-100% EtOAc/heptane) to afford 1-(benzyloxy)-9,10-difluoro-6-methyl-2,14-dioxo-N-(2,4,6-trifluorobenzyl)-2,7,12,14-tetrahydro-6H-6,13-methanobenzo[f]pyrido[1,2-a][1,4]diazonine-3-carboxamide.
MS
(m/
z) 610.07 [M+H]
+.
Synthesis of (6R)-9,10-difluoro-1-hydroxy-6-methyl-2,14-dioxo-N-(2,4,6-trifluorobenzyl)-2,7,12,14-tetrahydro-6H-6,13-methanobenzo[f]pyrido[1,2-a][1,4]diazonine-3-carboxamide
(191-1) and (6S)-9,10-difluoro-1-hydroxy-6-methyl-2,14-dioxo-N-(2,4,6-trifluorobenzyl)-2,7,12,14-tetrahydro-6H-6,13-methanobenzo[f]pyrido[1,2-a][1,4]diazonine-3-carboxamide
(191-2):
[1138] 1-(Benzyloxy)-9,10-difluoro-6-methyl-2,14-dioxo-N-(2,4,6-trifluorobenzyl)-2,7,12,14-tetrahydro-6H-6,13-methanobenzo[f]pyrido[1,2-a][1,4]diazonine-3-carboxamide
was separated into its individual enantiomers by preparative SFC on an OJ-H column
using 25% EtOH co-solvent to provide (6R)-1-(benzyloxy)-9,10-difluoro-6-methyl-2,14-dioxo-N-(2,4,6-trifluorobenzyl)-2,7,12,14-tetrahydro-6H-6,13-methanobenzo[f]pyrido[1,2-a][1,4]diazonine-3-carboxamide
as the first eluting peak and (6S)-1-(benzyloxy)-9,10-difluoro-6-methyl-2,14-dioxo-N-(2,4,6-trifluorobenzyl)-2,7,12,14-tetrahydro-6H-6,13-methanobenzo[f]pyrido[1,2-a][1,4]diazonine-3-carboxamide
as the second eluting peak. The separated enantiomers were dissolved in 1:1 toluene/TFA
(2 mL). The reaction mixture was stirred at rt for 2 h and concentrated. The residue
was dissolved in MeCN and purified by preparative HPLC (column, Gemini 10µ C18 110A,
AXI/; 250 × 21.2 mm) eluting 5-100% acetonitrile (0.1% TFA) in water (0.1% TFA) over
30 minutes. The combined fractions were lyophilized to afford (6R)-9,10-difluoro-1-hydroxy-6-methyl-2,14-dioxo-N-(2,4,6-trifluorobenzyl)-2,7,12,14-tetrahydro-6H-6,13-methanobenzo[f]pyrido[1,2-a][1,4]diazonine-3-carboxamide
and (6S)-9,10-difluoro-1-hydroxy-6-methyl-2,14-dioxo-N-(2,4,6-trifluorobenzyl)-2,7,12,14-tetrahydro-6H-6,13-methanobenzo[f]pyrido[1,2-a][1,4]diazonine-3-carboxamide.
Peak 1: MS (
m/
z) 520.16 [M+H]
+.
1H NMR (400 MHz, DMSO-
d6) δ 10.37 (t, J = 5.8 Hz, 1H), 8.36 (s, 1H), 7.42 (dd, J = 11.6, 8.1 Hz, 1H), 7.31
(dd, J = 11.4, 8.1 Hz, 1H), 7.21 (t, J = 8.6 Hz, 2H), 5.52 (d, J = 16.7 Hz, 1H), 4.65
- 4.51 (m, 2H), 4.43 (d, J = 16.7 Hz, 1H), 3.68 (d, J = 14.7 Hz, 1H), 3.40 (d, J =
14.7 Hz, 1H), 3.03 (s, 2H), 1.60 (s, 3H).
19F NMR (376 MHz, DMSO-
d6) δ -109.34 (ddd, J = 15.5, 9.3, 6.2 Hz), -112.57 (t, J = 7.3 Hz), -140.74 (ddd, J
= 23.0, 11.5, 8.2 Hz), -141.75 (dt, J = 20.8, 9.9 Hz). Peak 2: MS
(m/
z) 520.18 [M+H]
+.
1H NMR (400 MHz, DMSO-
d6) δ 10.37 (t, J = 5.8 Hz, 1H), 8.36 (s, 1H), 7.42 (dd, J = 11.7, 8.1 Hz, 1H), 7.31
(dd, J = 11.4, 8.1 Hz, 1H), 7.21 (t, J = 8.6 Hz, 2H), 5.52 (d, J = 16.8 Hz, 1H), 4.67
- 4.49 (m, 2H), 4.43 (d, J = 16.8 Hz, 1H), 3.68 (d, J = 14.7 Hz, 1H), 3.40 (d, J =
14.7 Hz, 1H), 3.03 (s, 2H), 1.60 (s, 3H)..
19F NMR (376 MHz, DMSO-
d6) δ - 109.34 (tt, J = 9.2, 6.3 Hz), -112.57 (t, J = 7.2 Hz), -140.74 (dt, J = 21.3,
9.9 Hz), -141.75 (dt, J = 20.6, 9.9 Hz).
Example 189: Synthesis of (3R,6R,7S)-N-(2,4-difluorobenzyl)-3-(fluoromethyl)-12-hydroxy-6-methyl-1,11-dioxo-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(192):
[1139]

Synthesis of benzyl ((2S,3R)-2-(((benzyloxy)carbonyl)amino)-3-methylpent-4-en-1-yl)((R)-1-((tert-butyldimethylsilyl)oxy)but-3-en-2-yl)carbamate
(192a-1) and benzyl ((2R,3SL-2-(((benzyloxy)carbonyl)amino)-3-methylpent-4-en-1-yl)((R)-1-((tert-butyldimethylsilyl)oxy)but-3-en-2-yl)carbamate
(192a-2):
[1140] The title compounds were synthesized in a manner similar to a mixture of benzyl ((2S,3R)-2-(((benzyloxy)carbonyl)amino)-3-methylpent-4-en-1-yl)((S)-but-3-en-2-yl)carbamate
(173d-1) and benzyl ((2R,3S)-2-(((benzyloxy)carbonyl)amino)-3-methylpent-4-en-1-yl)((S)-but-3-en-2-yl)carbamate
(173d-2) except using (
R)-1-((
tert-butyldimethylsilyl)oxy)but-3-en-2-amine
(181a) instead of (2S)-but-3-en-2-amine hydrochloride. MS (m/z) 567.30 [M+H]
+.
Synthesis of benzyl (3S,4R,7R)-3-(((benzyloxy)carbonyl)amino)-7-(((tert-butyldimethylsilyl)oxy)methyl)-4-methyl-2,3,4,7-tetrahydro-1H-azepine-1-carboxylate
(192b-1) and benzyl (3R,4S,7R)-3-(((benzyloxy)carbonyl)amino)-7-(((tertbutyldimethylsilyl)oxy)methyl)-4-methyl-2,3,4,7-tetrahydro-1H-azepine-1-carboxylate
(192b-2):
[1141] The title compounds were synthesized and separated in a manner similar to (
3S,4R,7S) and
(3R,4S,7S)-3-(((benzyloxy)carbonyl)amino)-4,7-dimethyl-2,3,4,7-tetrahydro-1H-azepine-1-carboxylate
(174e-1 and
174e-2) except using benzyl ((2S,3R)-2-(((benzyloxy)carbonyl)amino)-3-methylpent-4-en-1-yl)((R)-1-((tert-butyldimethylsilyl)oxy)but-3-en-2-yl)carbamate
(192a-1) and benzyl ((2R,3S)-2-(((benzyloxy)carbonyl)amino)-3-methylpent-4-en-1-yl)((R)-1-((tert-butyldimethylsilyl)oxy)but-3-en-2-yl)carbamate
(192a-2) instead of benzyl ((2S,3R)-2-(((benzyloxy)carbonyl)amino)-3-methylpent-4-en-1-yl)((S)-but-3-en-2-yl)carbamate
(174d-1) and benzyl ((2R,3S)-2-(((benzyloxy)carbonyl)amino)-3-methylpent-4-en-1-yl)((S)-but-3-en-2-yl)carbamate
(174d-2). MS (m/z) 539.30 [M+H]
+.
Synthesis of (3R,6R,7S)-12-(benzyloxy)-N-(2,4-difluorobenzyl)-3-(hydroxymethyl)-6-methyl-1,11-dioxo-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(192c):
[1142] Benzyl (3 S,4R,7R)-3-(((benzyloxy)carbonyl)amino)-7-(((tert-butyldimethylsilyl) oxy)methyl)-4-methyl-2,3,4,7-tetrahydro-1H-azepine-1-carboxylate
(192b-1) (285.3 mg, 0.530 mmol) was dissolved in TFA (5 mL) and heated to 100
0C in a sealed vial for 2 h. The reaction mixture was concentrated to get black viscous
syrup, which was co-evaporated with toluene once. A mixture of the residue, methyl
3-(benzyloxy)-5-((2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate, and
sodium bicarbonate (267.8 mg, 3.19 mmol) in water (3 mL) and methanol (6 mL) was stirred
at rt for 30 min, at 50 °C for 19 h, and at 60 °C for 10 h. The reaction mixture was
concentrated to remove most of methanol and the resulting mixture was dissolved with
dichloromethane (20 mL) and water (~20 mL). After the separated two fractions, the
aq fraction was extracted with dichloromethane (x 1). The organic fractions were combined,
dried (MgSO
4), and concentrated. The residue was purified with column chromatography on silica
gel eluting 0-20% methanol in dichloromethane to get 201.1 mg of the title compound:
MS
(m/
z) 536.11 [M+H]
+.
Synthesis of (3R,6R,7S)-12-(benzyloxy)-N-(2,4-difluorobenzyl)-3-(fluoromethyl)-6-methyl-1,11-dioxo-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(192d):
[1143] A solution of (3R,6R,7S)-12-(benzyloxy)-N-(2,4-difluorobenzyl)-3-(hydroxymethyl)-6-methyl-1,11-dioxo-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(192c) (201.1 mg, 376 umol) in dichloromethane (6 mL) was stirred at 0 °C as DAST (0.15
mL, 1.14 mmol) was added. After 30 min, the reaction mixture was stirred at rt for
18 h. While the reaction mixture was stirred at 0 °C, saturated sodium bicarbonate
(~30 mL) was added, and the product was extracted with dichloromethane (20 mL × 2).
The two organic extracts were combined, dried (MgSO
4) and concentrated. Purification with silica gel chromatography with 0-100% EtOAc
/ Heptane afford the product. MS
(m/
z) 538.20 [M+H]
+.
Synthesis of (3R,6R,7S)-12-(benzyloxy)-N-(2,4-difluorobenzyl)-3-(fluoromethyl)-6-methyl-1,11-dioxo-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide (192):
[1144] (3R,6R,7S)-12-(benzyloxy)-N-(2,4-difluorobenzyl)-3-(fluoromethyl)-6-methyl-1,11-dioxo-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(192d) (101 mg, 0.19 mmol) was dissolved in toluene (1 mL) and TFA (2 mL) and stirred at
rt for 2 h. After the reaction mixture was concentrated, the residue was dissolved
in DMF before filtered. The filtrate was purified by preparative HPLC (2 injections:
column, Gemini 5um C18 110A, LC column 100 × 30 mm) eluting 20-45% acetonitrile (0.1%
TFA) in water (0.1% TFA) over 60 min.) The product containing fraction was freeze-dried
to get 12.8 mg (15.2%) of the title compound: MS
(m/
z) 448.13 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) δ 10.26 (s, 1H), 8.38 (s, 1H), 7.41 (td, J = 9.2, 8.8, 6.5 Hz, 1H), 7.04 - 6.84
(m, 2H), 5.62 - 5.53 (m, 1H), 5.50 (ddd, J = 11.5, 2.4, 1.6 Hz, 1H), 5.40 (d, J =
23.2 Hz, 1H), 4.74 - 4.65 (m, 1H), 4.65 - 4.50 (m, 3H), 4.22 (ddd, J = 6.6, 3.1, 1.3
Hz, 1H), 4.00 (dd, J = 14.5, 3.0 Hz, 1H), 3.73 - 3.62 (m, 1H), 2.73 (td, J = 6.8,
3.4 Hz, 1H), 1.21 (d, J = 7.1 Hz, 3H).
Example 190: Preparation of (3R,6R,7S)-N-(2,4-difluorobenzyl)-3-(fluoromethyl)-12-hydroxy-6-methyl-1,11-dioxo-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(193):
[1145]

[1146] (3R,6R,7S)-12-(Benzyloxy)-N-(2,4-difluorobenzyl)-3-(fluoromethyl)-6-methyl-1,11-dioxo-1,6,7,11-tetrahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(192d) (101mg, 0.188 mmol) was dissolved in EtOH (3 mL) and Ethyl Acetate (2 mL) and 20%
Pd(OH)
2/C (71 mg) was added before stirred under H
2 atmosphere for 4 h. The reaction mixture was filtered through celite pad and the
celite pad was washed with ethyl acetate. The reaction mixture was concentrated to
dryness. The residue was dissolved in DMF and was purified by preparative HPLC (column,
Gemini 5um C18 110A, LC column 100 × 30 mm) eluting 15-65% acetonitrile (0.1% TFA)
in water (0.1% TFA) over 20 min.) to afford lyophilized form of product. MS
(m/
z) 436.10 [M+H]
+.
Example 191: Preparation of 6-(fluoromethyl)-12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide,
6-(fluoromethyl)-12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide,
6-(fluoromethyl)-12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide,
and 6-(fluoromethyl)-12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(194-1,194-2,194-3, and 194-4):
Step 1. Synthesis of 1-(tert-butyl) 4-ethyl 3-oxoazepane-1,4-dicarboxylate (194a):
[1148] To a solution of tert-butyl 3-oxopiperidine-1-carboxylate (50.0 g, 251.0 mmol, 1.0
eq) in diethyl ether (250 mL) at -30 °C was added a solution of boron trifluoride
etherate (32.0 g, 326 mmol, 1.3 eq) in diethyl ether (100 mL) dropwise. The mixture
was stirred at the same temperature for 10-15 min. A solution of compound
2 (37.3 g, 326.0 mmol, 1.3 eq) in diethyl ether (130 mL) was added dropwise at -30
°C. The mixture was stirred at the same temperature for additional 1.5 hr. After the
reaction mixture was warmed-up to room temperature, ethyl acetate (250 mL) was added,
and the organic phase was washed with 30% aqueous potassium carbonate (1 L) and brine
(300 mL). The organic phase was dried over anhydrous sodium sulfate and evaporated
under reduced pressure to afford crude product (70 g). The crude product was purified
by column chromatography on a silica gel (petroleum ether: ethyl acetate, 100:1 to
3:1) to afford compound
(194a). MS (
m/
z): 286.16 [M+H]
+.
Step 2. Synthesis of 1-(tert-butyl) 4-ethyl 3-aminoazepane-1,4-dicarboxylate (194b):
[1149] A reaction mixture of 1-(tert-butyl) 4-ethyl 3-oxoazepane-1,4-dicarboxylate
(194a) (18.2 g, 64.0 mmol, 1.0 eq), ammonium acetate (25.0 g, 319.0 mmol, 5.0 eq) and 4
Ã… MS (27.3 g) in methanol (180 mL) was stirred at ambient temperature under nitrogen
for 1 hr. Sodium cyanoborohydride (12.0 g, 191.4 mmol, 3.0 eq) was added and the mixture
was stirred overnight. Once the compound
(194a) was consumed completely, the reaction mixture was filtered through a pad of celite.
The filtration was concentrated under reduce pressure. The residue was poured into
saturated aqueous sodium carbonate solution. The mixture was extracted with ethyl
acetate and the combined organic phases were concentrated. The residue was adjusted
to pH 2 with 1 M HCl (100 mL). The mixture was extracted twice diethyl ether. The
aqueous phase was adjusted to pH 9 with IN NaOH, and extracted with ethyl acetate.
The organic phase was dried over sodium sulfate and concentrated to afford product
(194b), which was used in next step without further purification. MS
(m/
z): 287.19 [M+H]
+.
Step 3. Synthesis of ethyl 3-aminoazepane-4-carboxylate (194c):
[1150] To a solution of
1-(tert-butyl) 4-ethyl 3-aminoazepane-1,4-dicarboxylate
(194b) (11.5 g, 40.2 mmol, 1.0 eq) in ethyl acetate (30 mL) was added HCl/EA (3.0 M, 80
mL, 6.0 eq) at 0°C. The reaction mixture was stirred overnight. The reaction mixture
was monitored by LC-MS. Then mixture was concentrated under reduce pressure to afford
crude product
(194c), which was used in next step without further purification. MS
(m/
z): 187.14 [M+H]
+.
Step 4. Synthesis of 1-benzyl 4-ethyl 3-(((benzyloxy)carbonyl)amino)azepane-1,4-dicarboxylate (200d):
[1151] To a solution of crude intermediate ethyl 3-aminoazepane-4-carboxylate
(194c) (11.8 g, 46.0 mmol, 1.0 eq) and sodium carbonate (24.1 g, 228.0 mmol, 5.0 eq) in
THF/water (2:1, 300 mL) at 0 °C was added N-(benzyloxycarbonyloxy)succinimide (34.0
g, 137.0 mmol, 3.0 eq). The reaction mixture was stirred at ambient temperature overnight.
The reaction was monitored by LC-MS. The mixture was added ethyl acetate and the organic
layer was separated, washed with brine, dried with sodium sulfate, filtered and concentrated
under reduced pressure to afford compound
(194d). MS (
m/
z): 455.21 [M+H]
+.
Step 5. Synthesis of 1-((benzyloxy)carbonyl)-3-(((benzyloxy)carbonyl)amino)azepane-4-carboxylic
acid (194e):
[1152] To a solution of intermediate 1-benzyl 4-ethyl 3-(((benzyloxy)carbonyl)amino) azepane-1,4-dicarboxylate
(194d) (19.5 g, 42.9 mmol, 1.0 eq) in methanol/water (3:2, 500 mL) was added lithium hydroxide
hydrate (5.4 g, 129.0 mmol, 3.0 eq). Once the reaction completed, the reaction mixture
was concentrated under reduce pressure. The residue was added 6 N HCl till the solution
reached pH 1-2. The mixture was extracted with ethyl acetate and the combined organic
was dried over sodium sulfate, filtered and concentrated to afford crude product (20
g). The crude product was purified by prep-HPLC (C18, 0.1% TFA in MeCN-H
2O) to afford product
(194e). MS (
m/
z): 427.35 [M +H]
+.
1H NMR (400 MHz, DMSO-
d6)
δ 12.19 (m, 1H), 7.38-7.20 (m, 10H), 5.10-4.86 (m, 4H), 4.34-4.31 (m, 1H), 4.05 (m,
1H), 3.61-3.57 (m, 2H), 3.11-3.05 (m, 2H), 2.50 (m, 1H), 2.41 (m, 1H) and 1.88-1.46
(m, 4H).
Step 6. Synthesis of benzyl 3-(((benzyloxy)carbonyl)amino)-4-(methoxy(methyl)carbamoyl)
azepane-1-carboxylate (194f):
[1153] 1-((benzyloxy)carbonyl)-3-(((benzyloxy)carbonyl)amino)azepane-4-carboxylic acid
(194e) (1.1 g, 2.58 mmol) and HATU (1.18 g, 3.10 mmol) were dissolved in DMF(2 mL) and cooled
to 0 °C. Then DIEA (1.0 g, 7.70 mmol) was added. The resulting reaction mixture was
stirred for 30 min. N,O-dimethylhydroxylamine hydrochloride (0.252 g, 2.58 mmol) was
added. The reaction mixture was allowed to warm to rt and was stirred for 3 h. The
final reaction mixture was then partitioned with ethyl acetate and water. The organic
layer was separated, washed with 5 % LiCl and saturated brine. It was then dried with
MgSO
4 and filtered. The filtrate was concentrated to dryness. The residue was purified
with silica gel chromatography eluted with EtOAc and Heptane to afford product
(194f). MS (
m/
z): 470.20 [M+H]
+.
Step 7. Synthesis of benzyl 3-(((benzyloxy)carbonyl)amino)-4-formylazepane-1-carboxylate
(194g):
[1154] Benzyl 3-(((benzyloxy)carbonyl)amino)-4-(methoxy(methyl)carbamoyl) azepane-1-carboxylate
(194f) (0.69 g, 1.47 mmol) was dissolved in THF (2 mL). The solution was cooled to 0°C.
LAH (2M in THF) (0.808 mL, 1.62 mmol) was added dropwise and the solution was kept
at 0°C for 1 hour. Reaction was then quenched slowly with NaHCO
3 (sat) (25 mL) at 0°C. Salts was precipitated out after 10 min. The resulting mixture
was gradually warmed up to rt over 2 hours. The crude product was then extracted with
ether (2x 10 mL), then EtOAc (3x 10mL). Organic phase was washed with brine, dried
over MgSO
4 and was filtered. The filtrate was concentrated to afford the crude product
(194g) which was used in the next step. MS (
m/
z): 411.11 [M+H]
+.
Step 8. Synthesis of benzyl 3-(((benzyloxy)carbonyl)amino)-4-(hydroxymethyl)azepane-1-carboxylate
(194h):
[1155] Benzyl 3-(((benzyloxy)carbonyl)amino)-4-formylazepane-1-carboxylate
(194g) (0.367 g, 0.089 mmol) was dissolved in MeOH (5 mL). NaBH
4 (17 mg, 0.067 mmol). The reaction mixture was stirred at rt overnight. Reaction mixture
was then quenched with NaHCO
3 (sat) (10 mL) and the crude product was extracted with EtoAc (3× 10mL). Organic phase
was then washed with brine, dried with MgSO
4 and filtered. The filtrate was concentrated to afford the alcohol product
(194h) which was used for next step. MS
(m/
z): 413.08 [M+H]
+.
Step 9. Synthesis of (3-aminoazepan-4-yl)methanol (194i):
[1156] Benzyl 3-(((benzyloxy)carbonyl)amino)-4-(hydroxymethyl)azepane-1-carboxylate
(194h) (0.30 g, 0.073 mmol) was dissolved in EtOH (5 mL) and Pd/C (10%) (30 mg) was added.
The mixture was charged with hydrogenolysis system with stirring at rt overnight.
HCl (4 M in dioxane) (5 mL) was added to the reaction mixture. Reaction mixture was
then filtered through celite plug. The filtrate was concentrated to dryness to afford
the diamine HCl salt
(194i) which was used for next step. MS (
m/
z): 145.00 [M+H]
+.
Step 10. Synthesis of 12-(benzyloxy)-6-(hydroxymethyl)-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(194j):
[1157] The title compound was prepared in a manner similar to 12-(benzyloxy)-7-methyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11
hexahydro-3H-2,7-methanopyrido[1,2-a] [1,4]diazonine-10-carboxamide
(18d) using (3-aminoazepan-4-yl)methanol
(194i) instead of 3-methylazepan-3-amine
(18c). MS (
m/
z): 542.20 [M+H]
+.
Step 11. Synthesis of 12-(benzyloxy)-6-(fluoromethyl)-1.11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide (194k):
[1158] 12-(benzyloxy)-6-(hydroxymethyl)-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(194j) (50 mg, 0.092 mmol) was dissolved in DCM (1 mL). The solution was cooled down to
0 °C under argon. To this solution was added DeoxoFluor (0.245g, 1.11 mmol) under
argon. The resulting mixture was stirred at room temperature for 40 hours. Reaction
mixture was then quenched with NaHCO
3 (sat.) (10 mL). The crude product was subject to extraction with DCM (10 mL). Organic
phase was then separated and concentrated. The residue was purified on silica gel
column with 0-100% EtOAc/Heptane to afford product
(194k). MS (
m/
z): 544.18 [M+H]
+.
Step 12. Preparation of 12-(benzyloxy)-6-(fluoromethyl)-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(194-l-P1), 12-(benzyloxy)-6-(fluoromethyl)-1,1-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(194-l-P2), 12-(benzyloxy)-6-(fluoromethyl)-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(194-l-P3) and 12-(benzyloxy)-6-(fluoromethyl)-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide (194-l-P4):
[1159] Title compounds were separated from chiral SFC-IA system eluted with 30% IPA-NH
3 to afford
194-l-P1, 194-l-P2, 194-l-P3 and
194-l-P4 in the order of ascending retention time of each peak. MS (
m/
z): 544.18 [M+H]
+.
Step 13-1. Synthesis of 6-(fluoromethyl)-12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide (194-1):
[1160] The title compound was prepared in a manner similar to 6,12-dihydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido
[1,2-a][1,4]diazonine-10-carboxamide
(11) except using 12-(benzyloxy)-6-(fluoromethyl)-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(194-1-P1) instead of 12-(Benzyloxy)-6-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a]
[1,4]diazonine-10-carboxamide
(10a). MS (
m/
z): 454.21 [M+H]
+.
1H NMR (400 MHz, Chloroform-d) δ 10.45 (s, 1H), 8.54 (s, 1H), 6.89 - 6.38 (m, 2H),
4.82 - 4.54 (m, 3H), 4.54 - 4.24 (m, 2H), 4.19 - 3.85 (m, 2H), 3.56 (dd, J = 14.7,
1.7 Hz, 1H), 3.24 (dd, J = 13.7, 8.0 Hz, 1H), 2.41-2.22 (m, 2H), 2.02 - 1.77 (m, 1H),
1.63 (dd, J = 15.4, 7.0 Hz, 1H), 1.23 - 0.90 (m, 1H).
Step 13-2. Synthesis of 6-(fluoromethyl)-12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(194-2):
[1161] The title compound was prepared in a manner similar to 6,12-dihydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido
[1,2-a][1,4]diazonine-10-carboxamide
(11) except using 12-(benzyloxy)-6-(fluoromethyl)-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(194-l-P2) instead of 12-(benzyloxy)-6-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a]
[1,4]diazonine-10-carboxamide
(10a). MS (
m/
z): 454.26 [M+H]
+. 1H NMR (400 MHz, Chloroform-d) δ 10.37 (s, 1H), 8.50 (d, J = 4.4 Hz, 1H), 6.69 (t,
J = 8.1 Hz, 2H), 4.71-4.33 (m, 6H), 4.05 - 3.84 (m, 1H), 3.77 - 3.50 (m, 1H), 3.03
(ddd, J = 13.9, 8.9, 5.5 Hz, 1H), 2.31 - 1.36 (m, 5H).
Step 13-3. Synthesis of 6-(fluoromethyl)-12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide (194-3):
[1162] The title compound was prepared in a manner similar to 6,12-dihydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido
[1,2-a][1,4]diazonine-10-carboxamide
(11) except using 12-(benzyloxy)-6-(fluoromethyl)-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(194-l-P3) instead of 12-(benzyloxy)-6-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a]
[1,4]diazonine-10-carboxamide
(10a). MS (
m/
z): 454.24 [M+H]
+.
1H NMR (400 MHz, Chloroform-d) δ 10.37 (s, 1H), 8.50 (d, J = 4.4 Hz, 1H), 6.69 (t,
J = 8.1 Hz, 2H), 4.71-4.33 (m, 6H), 4.05 - 3.84 (m, 1H), 3.77 - 3.50 (m, 1H), 3.03
(ddd, J = 13.9, 8.9, 5.5 Hz, 1H), 2.31 - 1.36 (m, 5H).
Step 13-4. Synthesis of 6-(fluoromethyl)-12-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide (194-4):
[1163] The title compound was prepared in a manner similar to 6,12-dihydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido
[1,2-a][1,4]diazonine-10-carboxamide
(11) except using 12-(benzyloxy)-6-(fluoromethyl)-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a][1,4]diazonine-10-carboxamide
(194-l-P4) instead of 12-(benzyloxy)-6-hydroxy-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,4,5,6,7,11-hexahydro-3H-2,7-methanopyrido[1,2-a]
[1,4]diazonine-10-carboxamide
(10a). MS (
m/
z):
1H NMR (400 MHz, Chloroform-d) δ 10.45 (s, 1H), 8.54 (s, 1H), 6.89 - 6.38 (m, 2H),
4.82 - 4.54 (m, 3H), 4.54 - 4.24 (m, 2H), 4.19 - 3.85 (m, 2H), 3.56 (dd, J = 14.7,
1.7 Hz, 1H), 3.24 (dd, J = 13.7, 8.0 Hz, 1H), 2.41-2.22 (m, 2H), 2.02 - 1.77 (m, 1H),
1.63 (dd, J = 15.4, 7.0 Hz, 1H), 1.23 - 0.90 (m, 1H).
Example 192: (3S,6R,7R)-12-hydroxy-3,6-dimethyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,3,4,6,7,11-hexahydro-2,7-methanopyrido[1,2-d][1,4,7]oxadiazonine-10-carboxamide
(195):
[1164]

Synthesis of methyl N-(tert-butoxycarbonyl)-O-(2-methylallyl)-L-threoninate (195a):
[1165] A solution of L-Boc-Thr-OMe (703.2 mg, 3.01 mmol) and tert-butyl 2-methylallyl carbonate
(1039 mg, 6.03 mmol) in tetrahydrofuran (30 mL) was degassed by placing under vacuum
and backfilling with N
2 (3×). To this solution were added 1,1-bis(diphenylphosphino) ferrocene (335.3 mg,
0.605 mmol) and tris(dibenzylideneacetone)dipalladium(0) (278.3 mg, 0.304 mmol) and
degassed again before heating at 55 °C. After 1.5 h, the reaction mixture was cooled
to rt, and filtered to remove any insoluble material. The filtrate was concentrated,
and the residue was purified by column chromatography on silica gel eluting 0-25%
ethyl acetate in hexane to get the product. MS
(m/
z) 188.15 [M+H-C
4H
8]
+.
Synthesis of methyl N-(tert-butoxycarbonyl)-O-(2-oxopropyl)-L-threoninate (195b):
[1166] A solution of methyl N-(tert-butoxycarbonyl)-O-(2-methylallyl)-L-threoninate
(195a) (672.9 mg, 2.34 mmol) in methanol (30 mL) was stirred at -78 °C as ozone was bubbled
until blue color appeared. After the blue color appeared, Me
2S (10 mL) was added and the reaction mixture warmed to rt and stirred for 3 h. The
resulting solution was concentrated and the residue was purified by column chromatography
on silica gel eluting 20-80% ethyl acetate in hexane to the product. MS
(m/
z) 312.11 [M+Na]
+.
Synthesis of methyl N-(tert-butoxycarbonyl)-O-(2-((2-nitrophenyl)sulfonamido)propyl)-L-threoninate
(195c):
[1167] A solution of methyl N-(tert-butoxycarbonyl)-O-(2-oxopropyl)-L-threoninate
(195b) (638.6 mg, 2.21 mmol) and ammonium acetate (1033.5 mg, 13.4 mmol) in methanol (3.3
mL) was stirred at rt as sodium cyanoborohydride (134.3 mg, 2.14 mmol) was added.
The reaction was stirred at rt for 2 h. After the reaction mixture was concentrated,
the residue was dissolved in some water (20 mL), acidified with 1 N HCl (~1 mL), and
then diluted with 5% Na
2CO
3 (20 mL) before the product was extracted with dichloromethane (3 × 40 mL). The extracts
were combined, dried (MgSO
4), and concentrated.
[1168] The residue was dissolved in pyridine (6.5 mL) and stirred at rt as 2-nitrobenzenesulfonyl
chloride (514.7 mg, 2.32 mmol) was added. After 30 min at rt, the reaction mixture
was concentrated to remove most of excess pyridine. After the residue was dissolved
in ethyl acetate (~50 mL) and washed with 10% aq. citric acid solution, the aqueous
fraction was extracted with ethyl acetate (50 mL × 1). The organic fractions were
combined, dried (MgSO
4), and concentrated. The residue was purified by column chromatography on silica gel
eluting 30-70% ethyl acetate in hexane to get methyl N-(tert-butoxycarbonyl)-O-(2-((2-nitrophenyl)sulfonamido)propyl)-L-threoninate
(195c): MS
(m/
z) 498.06 [M+Na]
+.
Synthesis of tert-Butyl ((3S,4S,7S)-4,7-dimethyl-1-((2-nitrophenyl)sulfonyl)azepan-3-yl)carbamate (195d-1) and tert-butyl ((3S,4S,7R)-4,7-dimethyl-1-((2-nitrophenyl)sulfonyl)azepan-3-yl)carbamate
(195d-2):
[1169] A solution of methyl N-(tert-butoxycarbonyl)-O-(2-((2-nitrophenyl)sulfonamido)propyl)-L-threoninate
(195c) (407.9 mg, 0.858 mmol) in methanol (4.3 mL) and tetrahydrofuran (4.3 mL) was stirred
at rt as 1 N lithium hydroxide (4.3 mL) was added. After 18 h at rt, the reaction
mixture was concentrated to remove most of organic solvent and acidified by addition
of 1 N HCl (4.3 mL), before the product was extracted with ethyl acetate (~25 mL ×
2). After the extracts were washed with brine (~25 mL × 1), the organic fractions
were combined, dried (MgSO
4), and concentrated to get a crude acid.
[1170] The crude acid in tetrahydrofuran (2 mL) was stirred at 0 °C as 1 M borane tetrahydrofuran
complex (1.1 mL) was added. After 5 min, the reaction mixture was stirred at rt for
1 h and additional 1 M borane tetrahydrofuran complex (1 mL) was added. After 1 h
at rt, another 1 M borane tetrahydrofuran complex (1 mL) was added and the resulting
mixture was stirred at rt overnight. To the reaction mixture was added water (10 mL)
to remove any excess borane, before potassium carbonate (~1 g, 7.25 mmol) and di-
tert-butyl dicarbonate (~323 mg, 1.48 mmol) were added at rt. The resulting mixture was
stirred for 4 h. The reaction mixture was diluted with 10% citric acid and the product
was extracted with ethyl acetate (25 mL × 2). After the extracts were washed with
brine (25 mL × 1), the two fractions were combined, dried (MgSO
4), and concentrated. The residue was purified by column chromatography on silica gel
eluting 40%-100% ethyl acetate to get 207.1 mg (53.9%) of the diastereomeric mixture:
MS
(m/
z) 470.07 [M+Na]
+.
[1171] A solution of the diastereomeric alcohol mixture (207.1 mg, 0.463 mmol) and triphenylphosphine
(213.2 mg, 0.813 mmol) in toluene (93 mL, 5 mM) was stirred at rt as a solution of
diisopropyl azodicarboxylate (0.14 mL, 0.711 mmol) in toluene (0.9 mL) was added over
45 min. After addition, the resulting solution was stirred 1 h at rt. The reaction
mixture was concentrated, and the residue was purified by column chromatography on
silica gel eluting 10-100% ethyl acetate in hexanes to get two diastereomers separately.
195d-1: 68.5 mg (34.5%): MS (m/z) 452.10 [M+Na]+
195d-2: 82.0 mg (41.3%): MS (m/z) 452.05 [M+Na]+
Synthesis of (3S,6R,7R)-12-hydroxy-3,6-dimethyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,3,4,6,7,11-hexahydro-2,7-methanopyrido[1,2-d][1,4,7]oxadiazonine-10-carboxamide
(195-1):
[1172] A solution of tert-butyl ((3S,4S,7S)-4,7-dimethyl-1-((2-nitrophenyl)sulfonyl)azepan-3-yl)carbamate
(195d-1) (68.5 mg, 0.15 mmol), cesium carbonate (104.5 mg, 0.321 mmol), and benzenethiol (43.1
mg, 0.391 mmol) in acetonitrile (1 mL) was stirred at rt for 1.5 h. The resulting
solution was concentrated, and the residue was dissolved in 4 N HCl in 1,4-dioxane
(5 mL). After 1 h at rt, the solution was concentrated and co-evaporated with toluene
once.
[1173] A mixture of the above residue, methyl 3-(benzyloxy)-4-oxo-5-((2,4,6-trifluorobenzyl)carbamoyl)-4H-pyran-2-carboxylate,
72.3 mg,0.162 mmol), and sodium bicarbonate (69.6 mg, 0.829 mmol) in methanol (8 mL)
and water (2 mL) was stirred at rt over the weekend, and at 50 °C for 24 h. The reaction
mixture was diluted with water (25 mL) and the product was extracted with ethyl acetate
(~20 mL × 2). The extracts were washed with brine (20 mL × 1), combined, dried (MgSO
4), and concentrated. The residue was purified by column chromatography on silica gel
eluting 0-15% methanol in dichloromethane to get the product: MS
(m/
z) 542.10 [M+H]
+
[1174] To a solution of this product in toluene (0.5 mL) was added trifluoroacetic acid
(4 mL) at rt. After stirring 2 h at rt, the reaction mixture was concentrated, and
the residue was dissolved in DMF and filtered before purified by preparative HPLC
(column, Gemini 5um C18 110A, LC column 100 × 30 mm) eluting 15-70% acetonitrile (0.1%
TFA) in water (0.1% TFA) over 20 min.) The product containing fraction was freeze-dried
to get the title compound: MS
(m/
z) 452.13 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) δ 10.30 (s, 1H), 8.30 (s, 1H), 6.92 - 6.75 (m, 2H), 4.60 (d, J = 5.5 Hz, 2H), 4.27
(q, J = 1.9 Hz, 1H), 4.03 - 3.94 (m, 2H), 3.85 (dd, J = 11.3, 7.2 Hz, 1H), 3.75 (h,
J = 6.8 Hz, 1H), 3.64 (dd, J = 11.3, 7.2 Hz, 1H), 3.48 (dd, J = 15.0, 2.3 Hz, 1H),
1.64 (d, J = 6.9 Hz, 3H), 1.11 (d, J = 6.5 Hz, 3H).
19F NMR (376 MHz, Acetonitrile-d
3) δ -77.37, -111.15 (tt, J = 9.0, 6.1 Hz), -113.86 (t, J = 7.2 Hz).
Example 193: Synthesis of (3R,6R,7R)-12-hydroxy-3,6-dimethyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,3,4,6,7,11-hexahydro-2,7-methanopyrido[1,2-d][1,4,7]oxadiazonine-10-carboxamide
(196):
[1175] The title compound was synthesized in a manner similar to (3S,6R,7R)-12-hydroxy-3,6-dimethyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,3,4,6,7,11-hexahydro-2,7-methanopyrido[1,2-d][1,4,7]oxadiazonine-10-carboxamide
(195) except using
tert-butyl ((3S,4S,7R)-4,7-dimethyl-1-((2-nitrophenyl)sulfonyl)azepan-3-yl)carbamate
(195d-2) instead of tert-Butyl ((3S,4S,7S)-4,7-dimethyl-1-((2-nitrophenyl)sulfonyl)azepan-3-yl)carbamate
(195d-1) : MS
(m/
z) 452.12 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) δ 10.37 (s, 1H), 8.28 (s, 1H), 6.92 - 6.76 (m, 2H), 4.74 (dp, J = 10.6, 6.8 Hz,
1H), 4.59 (d, J = 5.6 Hz, 2H), 4.30 (q, J = 2.6 Hz, 1H), 4.08 (dd, J = 12.9, 6.8 Hz,
1H), 3.89 (qd, J = 6.5, 2.7 Hz, 1H), 3.80 (dd, J = 15.3, 2.0 Hz, 1H), 3.74 (dd, J
= 15.3, 2.8 Hz, 1H), 3.18 (dd, J = 12.9, 10.5 Hz, 1H), 1.15 (d, J = 6.8 Hz, 3H), 1.01
(d, J = 6.5 Hz, 3H).
19F NMR (376 MHz, Acetonitrile-d
3) δ -77.36, -111.20 (ddd, J = 15.2, 9.1, 6.1 Hz), -113.88 (p, J = 7.6 Hz).
Example 194: Preparation of (3R,6R,7R)-N-(2,4-difluorobenzyl)-12-hydroxy-3,6-dimethyl-1,11-dioxo-1,3,4,6,7,11-hexahydro-2,7-methanopyrido[1,2-d][1,4,7]oxadiazonine-10-carboxamide
(197):
[1176]

[1177] The title compound was synthesized in a manner similar to (3R,6R,7R)-12-hydroxy-3,6-dimethyl-1,11-dioxo-N-(2,4,6-trifluorobenzyl)-1,3,4,6,7,11-hexahydro-2,7-methanopyrido[1,2-d][1,4,7]oxadiazonine-10-carboxamide
(196) using methyl 3-(benzyloxy)-5-((2,4-difluorobenzyl)carbamoyl)-4-oxo-4H-pyran-2-carboxylate:
MS
(m/
z) 434.16 [M+H]
+.
1H NMR (400 MHz, Acetonitrile-d
3) δ 10.37 (s, 1H), 8.33 (s, 1H), 7.41 (td, J = 9.2, 8.8, 6.4 Hz, 1H), 7.01 - 6.85
(m, 2H), 4.75 (dp, J = 10.5, 6.8 Hz, 1H), 4.58 (d, J = 5.6 Hz, 2H), 4.34 (q, J = 2.6
Hz, 1H), 4.09 (dd, J = 12.9, 6.8 Hz, 1H), 3.90 (qd, J = 6.4, 2.7 Hz, 1H), 3.86 - 3.65
(m, 2H), 3.19 (dd, J = 12.9, 10.6 Hz, 1H), 1.16 (d, J = 6.8 Hz, 3H), 1.02 (d, J =
6.5 Hz, 3H).
19F NMR (376 MHz, Acetonitrile-d
3) δ -77.34, -114.05 (ddd, J = 15.6, 8.8, 6.9 Hz), -116.43 - -116.70 (m).
Example 195: HIV MT-4 Antiviral and Cytotoxicity Assay
Antiviral assay in MT-4 cells
[1178] Compounds were tested in a high-throughput 384-well assay format for their ability
to inhibit the replication of HIV-1 (IIIB) in MT-4 cells. Compounds were serially
diluted (1:3) in DMSO on 384-well polypropylene plates and further diluted 200-fold
into complete RPMI media (10% FBS, 1% P/S) using the Biotek Micro Flow and Labcyte
ECHO acoustic dispenser. Each plate contained up to 8 test compounds, with negative
(No Drug Control) and 5 µM AZT positive controls. MT-4 cells were pre-infected with
10 µL of either RPMI (mock-infected) or a fresh 1:250 dilution of HIV-1 IIIB concentrated
virus stock. Infected and uninfected MT-4 cells were further diluted in complete RPMI
media and added to each plate using a Micro Flow dispenser. After 5 days incubation
in a humidified and temperature controlled incubator (37 °C), Cell Titer Glo (Promega)
was added to the assay plates and chemiluminescence read using an Envision plate-reader.
EC
50 values were defined as the compound concentration that causes a 50% decrease in luminescence
signal, and were calculated using a sigmoidal dose-response model to generate curve
fits.
Cytotoxicity assay in MT-4 cells
[1179] Assays were performed as above except uninfected MT-4 cells were added to each well
containing test compound. In addition, 10µM puromycin was added to the last column
of each assay plate to assess a base level of cytotoxicity.
Example 196: HIV MT-4 Serum Shift Antiviral Reporter Assay
[1180] To quantify the amount of protein binding to human serum, compounds were serially
diluted (1:3) in DMSO and acoustically transferred onto 384-well assay plates via
a Labcyte ECHO robot. Each plate contained up to 8 test compounds, including negative
and positive controls, (DMSO, 5 µM AZT respectively). Assay plates were prepared in
duplicate, and tested in either CCM (cell culture media) or HS/CCM (human serum/cell
culture media). MT-4 cells were first pre-infected with pLai RLuc reporter virus for
2 h at 37 °C, then further diluted in either CCM (RPMI media, 10% FBS, 1% P/S) or
HS/CCM (RPMI media, 10% FBS, 50% HS, 1% P/S), and subsequently added to each plate
using a Biotek Micro Flow dispenser. After a 72-h incubation in a humidified and temperature
controlled incubator (37 °C), Renilla Glo (Promega) was added to all assay plates
and chemiluminescence read using an Envision plate-reader. EC
50 values were defined as the compound concentration that causes a 50% decrease in luminescence
signal, and were calculated using a sigmoidal dose-response model to generate curve
fits. To determine the amount of protein binding, EC
50 fold shifts (or EC
50 shifts) were calculated by dividing EC
50 (HS/CCM) / EC
50 (CCM).
[1181] Compounds of the present disclosure demonstrate antiviral activity in this assay
as depicted in
Table 1 below. Accordingly, the compounds of the embodiments disclosed herein may be useful
for treating the proliferation of the HIV virus, treating AIDS, or delaying the onset
of AIDS or ARC symptoms.
Table 1
Compound No. |
EC50 (nM) |
CC50 (nM) |
Antiviral Serum Shift RLuc |
CCM |
50% HS |
EC50 shift |
1-1 |
16.5 |
>50000 |
3.64 |
4.85 |
1.3 |
1-2 |
5.7 |
20721 |
1.37 |
13.91 |
10.2 |
rac-1 |
3.9 |
>47853 |
NA |
NA |
|
2 |
3.4 |
>47845 |
NA |
NA |
|
3-1 |
4.2 |
>40240 |
0.85 |
71.52 |
84.4 |
3-2 |
5.4 |
>43345 |
1.60 |
3.86 |
2.4 |
4-1 |
6.4 |
23325 |
NA |
NA |
|
4-2 |
4.8 |
10679 |
1.11 |
4.36 |
3.9 |
5-1 |
2 |
11077 |
0.235 |
1.24 |
5.3 |
5-2 |
2.9 |
19470 |
0.72 |
142.04 |
196.5 |
6 |
19.9 |
25381 |
NA |
NA |
|
7 |
1.4 |
8807 |
0.28 |
1.47 |
5.2 |
8 |
1.5 |
20756 |
0.41 |
1.41 |
3.4 |
9 |
1.8 |
6606 |
0.33 |
1.684 |
5.1 |
10-1 |
3.2 |
37062 |
1.02 |
1141.8 |
1116.1 |
10-2 |
1 |
16065 |
0.27 |
5.04 |
18.7 |
11 |
7.2 |
>50000 |
NA |
NA |
|
12 |
4.1 |
>50000 |
NA |
NA |
|
13 |
1.3 |
17176 |
NA |
NA |
|
14-1 |
3 |
22209 |
0.79 |
1.88 |
2.4 |
14-2 |
2.7 |
19928 |
0.5665 |
0.4138 |
0.7 |
15-1 |
1.7 |
18338 |
0.32 |
11.59 |
35.9 |
15-2 |
1.4 |
15304 |
0.29 |
4.32 |
15.1 |
16-1 |
2.1 |
14374 |
0.25 |
3.22 |
13.1 |
16-2 |
5.3 |
36178 |
0.85 |
82.5 |
97.1 |
17-1a |
1.5 |
12903 |
NA |
NA |
|
17-1b |
1.2 |
10866 |
0.26 |
3.10 |
11.9 |
17-2b |
1.2 |
10985 |
0.31 |
101.43 |
326.4 |
18 |
1.4 |
29387 |
NA |
NA |
|
19 |
4 |
>50000 |
1.21 |
4.35 |
3.6 |
20 |
5.6 |
37193 |
1.83 |
33.44 |
18.3 |
21 |
21.4 |
10516 |
NA |
NA |
|
22 |
16.2 |
11026 |
2.6393 |
359.8344 |
136.3 |
23 |
59.9 |
11980 |
NA |
NA |
|
24 |
27.3 |
13791 |
NA |
NA |
|
24-1 |
10.3 |
13564 |
NA |
NA |
|
25 |
1.7 |
12551 |
0.1908 |
1.9216 |
10.1 |
25-1 |
1.3 |
11509 |
0.42 |
36.56 |
87.8 |
25-2 |
1.463 |
10839 |
0.285 |
1.142 |
4.007 |
26-1 |
1.4 |
15922 |
0.354 |
33.447 |
94.483 |
26-2 |
1.315 |
14384 |
0.353 |
2.29 |
6.484 |
27 |
> 100 |
10928 |
NA |
NA |
|
28 |
13.5 |
>50000 |
NA |
NA |
|
29 |
7 |
>50000 |
NA |
NA |
|
30 |
6.9 |
1655 |
NA |
NA |
|
31 |
> 100 |
>50000 |
NA |
NA |
|
32 |
> 100 |
>50000 |
NA |
NA |
|
33 |
7 |
>50000 |
NA |
NA |
|
34 |
3.3 |
16352 |
2.06 |
9.56 |
4.6 |
35 |
1.5 |
4964 |
0.4235 |
44.379 |
104.8 |
36 |
2 |
17682 |
0.9168 |
7.16 |
7.8 |
37-1 |
21.4 |
10516 |
NA |
NA |
|
37-2 |
1.2 |
12932 |
NA |
NA |
|
38-1 |
16.3 |
11026 |
2.64 |
359.83 |
136.3 |
38-2 |
0.93 |
12819 |
NA |
NA |
|
40-1 |
4.2 |
10966 |
0.784 |
15.2 |
19.4 |
40-2 |
1.3 |
10429 |
0.2565 |
1.104 |
4.3 |
41-1 |
1.6 |
15600 |
0.335 |
6.642 |
19.8 |
41-2 |
1.4 |
14327 |
0.26 |
0.968 |
3.7 |
42-1 |
1.6 |
7491 |
0.28 |
1.343 |
4.8 |
43-1 |
41.5029 |
8095.09 |
4.3509 |
146.894 |
33.762 |
43-2 |
1.5656 |
9153.77 |
0.2888 |
0.6471 |
2.241 |
44-1 |
1.7143 |
10675.1 |
0.6771 |
2.3294 |
3.440 |
44-2 |
2.3584 |
15093.6 |
0.2639 |
36.7682 |
139.326 |
45-1 |
1.66 |
6896.98 |
0.3592 |
2.5622 |
7.133 |
45-2 |
30.2907 |
8893.66 |
NA |
NA |
|
46-1 |
90.1808 |
9243.32 |
NA |
NA |
|
46-2 |
1.4061 |
12461.7 |
0.2038 |
2.9056 |
14.257 |
47-1 |
4.9335 |
11069 |
0.6818 |
25.7126 |
37.713 |
47-2 |
1.1557 |
8719.43 |
0.2475 |
1.0146 |
4.099 |
48-1 |
>33.9968 |
>13825.5 |
NA |
NA |
|
48-2 |
2.3814 |
17623.5 |
0.3576 |
1.5217 |
4.255 |
49-1 |
36.4791 |
>15749.7 |
NA |
NA |
|
49-2 |
2.3763 |
7198.79 |
0.2017 |
1.1149 |
5.528 |
50-1 |
1.3936 |
>13523.5 |
0.265 |
0.9483 |
3.578 |
50-2 |
32.4997 |
32295.8 |
NA |
NA |
|
51 |
1.1661 |
4394.79 |
0.2148 |
2.1426 |
9.975 |
52-1 |
2.1501 |
13106.8 |
0.2451 |
6.1848 |
25.234 |
52-2 |
1.6848 |
5840.28 |
0.3836 |
2.1863 |
5.699 |
52-3 |
3.0542 |
15511.9 |
0.5886 |
114.386 |
194.336 |
52-4 |
1.3294 |
10251.2 |
0.2185 |
7.5383 |
34.500 |
53-1 |
2.1319 |
13201.3 |
0.5412 |
6.1285 |
11.324 |
53-2 |
6.1991 |
28411.9 |
1.5767 |
2.2704 |
1.440 |
53-3 |
1.9369 |
11225.7 |
0.2232 |
75.2215 |
337.014 |
53-4 |
4.7227 |
>44439.9 |
0.6964 |
18.2792 |
26.248 |
54 |
35.9773 |
1461.26 |
NA |
NA |
|
55-1 |
>89.3998 |
13022.9 |
NA |
NA |
|
55-2 |
1.7959 |
7325.14 |
0.3124 |
1.318 |
4.219 |
56-1 |
3.9932 |
>39448 |
0.9668 |
1.9124 |
1.978 |
56-2 |
1.8588 |
17796.6 |
0.4008 |
1.0814 |
2.698 |
56-3 |
5.2398 |
16142.8 |
0.3121 |
13.2839 |
42.563 |
56-4 |
8.0928 |
30483.9 |
2.1575 |
15.3982 |
7.137 |
57-1 |
1.2217 |
6903.94 |
0.2281 |
2.357 |
10.333 |
57-2 |
1.7716 |
8911.35 |
0.3958 |
133.192 |
336.513 |
58 |
0.9864 |
4150.27 |
0.25 |
1.674 |
6.696 |
59-1 |
1.5296 |
14950.9 |
0.3614 |
26.4155 |
73.092 |
59-2 |
2.1544 |
18793.7 |
0.5467 |
55.2076 |
100.983 |
60-1 |
1.7688 |
13875.4 |
0.4567 |
1.5982 |
3.499 |
60-2 |
1.9709 |
14014.7 |
0.3278 |
102.119 |
311.528 |
60-3 |
2.2327 |
14779.9 |
0.3762 |
14.7718 |
39.266 |
61-1 |
1.8541 |
10269.7 |
0.2057 |
72.0046 |
350.047 |
61-2 |
2.511 |
16921.8 |
0.1425 |
13.8153 |
96.949 |
62 |
1.271 |
3460.16 |
0.2923 |
4.2163 |
14.425 |
63-1 |
1.697 |
13831 |
0.4605 |
2.1551 |
4.680 |
63-2 |
8.1449 |
14345 |
NA |
NA |
|
64-1 |
17.511 |
14798.4 |
NA |
NA |
|
64-1 |
1.8112 |
12304.8 |
0.3187 |
3.3134 |
10.397 |
65-1 |
1.729 |
8803.93 |
0.2974 |
28.5257 |
95.917 |
65-2 |
1.662 |
8818.84 |
0.3408 |
3.4706 |
10.184 |
66-1 |
1.759 |
11138.1 |
0.2257 |
20.3357 |
90.101 |
66-2 |
1.6776 |
10415.4 |
0.2939 |
4.5498 |
15.481 |
67 |
2.435 |
23927 |
0.4373 |
1.49 |
3.407 |
68 |
1.2016 |
3582.46 |
0.2786 |
1.173 |
4.210 |
69 |
1.9526 |
36668.6 |
0.1991 |
1.0555 |
5.301 |
70 |
1.4143 |
13305.3 |
0.3216 |
1.3223 |
4.112 |
71 |
2.1381 |
15023.4 |
0.3019 |
1.6648 |
5.514 |
72-1 |
1.5745 |
9990.49 |
0.2812 |
5.3609 |
19.064 |
72-2 |
4.272 |
12071 |
0.267 |
33.9942 |
127.319 |
73-1 |
5.1985 |
>50000 |
0.7154 |
0.897 |
1.254 |
73-2 |
1.8176 |
23088.5 |
0.2834 |
0.9188 |
3.242 |
74 |
1.5209 |
7282.09 |
0.4924 |
13.7527 |
27.930 |
75-1 |
3.7581 |
15064 |
0.5954 |
297.933 |
500.391 |
75-2 |
2.0852 |
26015.7 |
0.4731 |
2.1855 |
4.620 |
76 |
7.9887 |
23714.2 |
NA |
NA |
|
77 |
2.1699 |
15139 |
0.7625 |
2.1291 |
2.792 |
78 |
9.5602 |
>50000 |
1.9344 |
3.7613 |
1.944 |
79-1 |
58.5033 |
>50000 |
19.4934 |
23.5172 |
1.206 |
79-2 |
17.6754 |
>50000 |
5.3345 |
6.6114 |
1.239 |
80-1 |
2.2408 |
10418 |
0.3479 |
0.6513 |
1.872 |
80-2 |
5.3482 |
13431.2 |
0.6178 |
7.5443 |
12.212 |
81-1 |
1.9611 |
23908.4 |
0.4657 |
0.6486 |
1.393 |
81-2 |
1.3471 |
11217.3 |
0.3037 |
0.7366 |
2.425 |
82-1 |
20.4772 |
>50000 |
4.4991 |
5.1564 |
1.146 |
82-2 |
9.5667 |
>50000 |
2.0893 |
3.0001 |
1.436 |
83-1 |
39.0323 |
>50000 |
8.1859 |
7.0836 |
0.865 |
83-2 |
12.7625 |
>50000 |
2.1459 |
2.0813 |
0.970 |
84 |
2.0148 |
37242.9 |
0.4269 |
1.3577 |
3.180 |
85-1 |
5.6415 |
>49893.8 |
1.0561 |
1.5656 |
1.482 |
85-2 |
5.8471 |
>49303.7 |
NA |
NA |
|
86-1 |
27.0189 |
>30284.7 |
NA |
NA |
|
86-2 |
1.1029 |
13670.1 |
0.2624 |
0.4997 |
1.904 |
87-1 |
6.087 |
>50000 |
NA |
NA |
|
87-2 |
1.7405 |
>50000 |
NA |
NA |
|
88 |
1.6118 |
>23363.4 |
0.2689 |
1.6221 |
6.032 |
89 |
2.3821 |
>47882.8 |
0.6695 |
4.3871 |
6.553 |
90-1 |
24.1091 |
>32641.1 |
NA |
NA |
|
90-2 |
2.4192 |
>20829 |
0.361 |
1.2158 |
3.368 |
91 |
23.2445 |
>50000 |
NA |
NA |
|
92-1 |
535.14 |
>50000 |
NA |
NA |
|
92-2 |
2.0073 |
>39254.4 |
0.309 |
0.7718 |
2.498 |
93 |
2.2394 |
>40448 |
0.462 |
1.5453 |
3.345 |
94 |
1.1501 |
13696.6 |
0.4106 |
1.7331 |
4.221 |
95 |
31.5104 |
>50000 |
5.1827 |
4.8359 |
0.933 |
96 |
18.1014 |
>50000 |
3.0937 |
3.3317 |
1.077 |
97-1 |
2.8464 |
6060.22 |
NA |
NA |
|
97-2 |
6.0509 |
16260 |
NA |
NA |
|
98 |
1.2675 |
14265.2 |
0.2843 |
19.248 |
67.703 |
99-1 |
1.5281 |
>22228.6 |
NA |
NA |
|
99-2 |
3.021 |
>23444.8 |
NA |
NA |
|
100 |
1.5795 |
9442.24 |
0.6311 |
1.775 |
2.813 |
101 |
1.5175 |
19491 |
0.2198 |
1.617 |
7.357 |
102 |
37.5089 |
>50000 |
NA |
NA |
|
103-1 |
8.9698 |
>50000 |
NA |
NA |
|
103-2 |
9.2042 |
>50000 |
NA |
NA |
|
104-1 |
1.479 |
11939.9 |
0.3228 |
1.9889 |
6.161 |
104-2 |
35.3472 |
13969.1 |
NA |
NA |
|
105 |
1.899 |
22298.7 |
NA |
NA |
|
106 |
2.3221 |
6844.95 |
NA |
NA |
|
107-1 |
15.1187 |
>50000 |
NA |
NA |
|
107-2 |
12.1483 |
>50000 |
NA |
NA |
|
108-1 |
0.9969 |
16138.7 |
0.1998 |
1.3121 |
6.567 |
108-2 |
0.9175 |
11845.4 |
0.3349 |
1.5468 |
4.619 |
109-1 |
1.8113 |
11327.4 |
0.5269 |
50.7701 |
96.356 |
109-2 |
1.4698 |
11818.7 |
0.2359 |
4.3422 |
18.407 |
110-1 |
1.9954 |
9868.68 |
0.3228 |
2.747 |
8.510 |
110-2 |
30.4848 |
6332.17 |
4.8116 |
53.7139 |
11.163 |
111-1 |
2.0089 |
5912.44 |
0.447 |
7.1154 |
15.918 |
111-2 |
56.851 |
9940.86 |
NA |
NA |
|
112 |
0.7118 |
8028.02 |
0.182 |
27.8338 |
152.933 |
113 |
1.4222 |
16935.5 |
0.514 |
0.6202 |
1.207 |
114 |
2.2672 |
30489 |
0.7168 |
1.0436 |
1.456 |
115-1 |
1.4845 |
12153.2 |
0.2714 |
0.7128 |
2.626 |
115-2 |
2.5788 |
28067.8 |
NA |
NA |
|
116-1 |
1.2026 |
16262.2 |
0.2683 |
1.3691 |
5.103 |
116-2 |
1.6357 |
9680.88 |
NA |
NA |
|
117-1 |
1.9335 |
13268.3 |
0.3301 |
7.166 |
21.709 |
117-2 |
3.5287 |
15724.1 |
0.6029 |
1267.17 |
2101.791 |
118-1 |
0.7901 |
11522.9 |
0.2961 |
0.8808 |
2.975 |
118-2 |
1.1698 |
11582.2 |
0.2494 |
0.5069 |
2.032 |
119-1 |
1.4988 |
15186 |
0.4315 |
62.3024 |
144.386 |
119-2 |
1.983 |
8483.29 |
0.5243 |
86.2519 |
164.509 |
120-1 |
3.5357 |
8986.12 |
0.3707 |
4.9645 |
13.392 |
120-2 |
>59.3595 |
11062.5 |
14.0291 |
238.69 |
17.014 |
121 |
1.7604 |
24771 |
0.235 |
0.505 |
2.149 |
122-1 |
2.5734 |
4735.96 |
0.5341 |
4.7769 |
8.944 |
122-2 |
14.4383 |
4770.25 |
3.7701 |
298.119 |
79.075 |
123-1 |
2.0494 |
13672.6 |
0.3156 |
3.674 |
11.641 |
123-2 |
1.9315 |
14557 |
0.2446 |
440.282 |
1800.008 |
124 |
2.7895 |
15437.2 |
NA |
NA |
|
125 |
2.948 |
10204.6 |
0.3284 |
1.9723 |
6.006 |
126 |
4.7536 |
15442 |
NA |
NA |
|
127-1 |
1.378 |
5634.36 |
0.3244 |
2.9319 |
9.038 |
127-2 |
3.9334 |
13694.7 |
NA |
NA |
|
128-1 |
2.1461 |
>47213 |
0.763 |
7.6094 |
9.973 |
128-2 |
7.3666 |
>50000 |
NA |
NA |
|
129 |
1.5298 |
7439.4 |
0.3086 |
4.2136 |
13.654 |
130-1 |
1.5289 |
12157 |
0.2134 |
4.1657 |
19.521 |
130-2 |
|
|
NA |
NA |
|
131 |
1.6815 |
10195.9 |
0.2502 |
10.9846 |
43.903 |
132-1 |
8.8316 |
>50000 |
NA |
NA |
|
132-2 |
2.783 |
25724.3 |
NA |
NA |
|
132-3 |
2.1399 |
24111.3 |
NA |
NA |
|
133 |
|
|
0.5333 |
1.6556 |
3.104 |
134-1 |
3.2852 |
16241.4 |
NA |
NA |
|
134-2 |
5.7021 |
10640.8 |
NA |
NA |
|
135-1 |
3.3583 |
>50000 |
NA |
NA |
|
135-2 |
4.7742 |
>50000 |
NA |
NA |
|
136-1 |
39.8746 |
12419 |
NA |
NA |
|
136-2 |
1.552 |
6545.11 |
0.3924 |
5.7141 |
14.562 |
137-1 |
2.6342 |
14729.8 |
0.1842 |
0.7073 |
3.840 |
137-2 |
2.0207 |
20664 |
0.1819 |
0.8205 |
4.511 |
138 |
3.1738 |
5018.92 |
0.7077 |
8.7019 |
12.296 |
139-1 |
14.8201 |
>50000 |
3.9339 |
84.3485 |
21.441 |
139-2 |
9.1146 |
>50000 |
NA |
NA |
|
140-1 |
24.0951 |
14626.6 |
NA |
NA |
|
140-2 |
1.9245 |
5230.63 |
0.3472 |
22.3881 |
64.482 |
141 |
>100 |
>50000 |
29.6111 |
198.922 |
6.718 |
142-1 |
1.9701 |
8415.1 |
0.3544 |
1.18 |
3.330 |
142-2 |
1.8664 |
13574.7 |
0.3627 |
2.8081 |
7.742 |
143-1 |
22.6592 |
>50000 |
4.749 |
132.466 |
27.893 |
143-2 |
12.7969 |
>50000 |
NA |
NA |
|
144-1 |
1.6536 |
9179.34 |
0.2851 |
2.6289 |
9.221 |
144-2 |
1.9794 |
13916.8 |
0.4688 |
4.4642 |
9.523 |
145 |
0.8221 |
8849.89 |
0.2177 |
0.9196 |
4.224 |
146 |
1.757 |
>50000 |
0.2265 |
1.1178 |
4.935 |
147 |
2.1391 |
6909.44 |
0.3752 |
3.64 |
9.701 |
148 |
1.6707 |
13841.3 |
0.1822 |
6.3387 |
34.790 |
149 |
1.5901 |
10021.4 |
0.2549 |
2.973 |
11.663 |
150 |
1.9813 |
8487.89 |
0.1711 |
4.4132 |
25.793 |
151-1 |
4.2684 |
14682.7 |
0.729 |
1143.52 |
1568.615 |
151-2 |
1.7492 |
7203.1 |
0.4402 |
77.2201 |
16.402 |
152 |
4.0469 |
12031.9 |
NA |
NA |
|
153 |
29.7938 |
5614.41 |
NA |
NA |
|
154-1 |
1.6409 |
25708.3 |
0.2969 |
4.291 |
14.453 |
154-2 |
1.9412 |
15228.9 |
0.3057 |
7.1366 |
23.345 |
155-1 |
3.0511 |
39480.7 |
NA |
NA |
|
155-2 |
4.4293 |
>41262.5 |
NA |
NA |
|
156 |
1.7471 |
13691.7 |
0.1867 |
41.3025 |
221.224 |
157 |
5.3621 |
23691.5 |
1.6105 |
5.7498 |
3.570 |
158 |
1.6658 |
8825.72 |
0.3062 |
49.749 |
162.472 |
159 |
3.5226 |
>43568.6 |
0.9759 |
2.5602 |
2.623 |
160 |
1.5183 |
11378.3 |
0.3682 |
1.1935 |
3.241 |
161 |
2.1023 |
4631.34 |
0.3001 |
1.015 |
3.382 |
162-1 |
1.1448 |
16215.6 |
0.067 |
11.919 |
177.9 |
162-2 |
2.5844 |
14355.2 |
0.118 |
15.329 |
129.91 |
163-1 |
1.259 |
20186.2 |
0.0674 |
11.9187 |
176.835 |
163-2 |
2.2876 |
13770.6 |
0.1183 |
15.3293 |
129.580 |
164 |
1.208 |
10399.5 |
0.3329 |
13.3338 |
40.053 |
165 |
1.0993 |
9610.76 |
0.3511 |
7.3266 |
20.868 |
166 |
2.499 |
15575 |
0.5830 |
1.625 |
2.787 |
167 |
3.231 |
18651 |
NA |
NA |
|
168 |
1.747 |
13692 |
0.1870 |
41.303 |
220.87 |
169 |
1.398 |
11767 |
0.3220 |
2.887 |
8.966 |
170 |
1.21 |
9862.3 |
NA |
NA |
|
171 |
0.962 |
4193.6 |
0.387 |
8.497 |
21.956 |
172-1 |
2.4 |
15614 |
0.6890 |
42.748 |
62.044 |
172-2 |
1.471 |
12813 |
0.4170 |
2.615 |
6.271 |
173 |
1.235 |
12478 |
0.3630 |
13.888 |
38.259 |
174 |
1.26 |
11385 |
0.3460 |
58.433 |
168.88 |
175 |
1.287 |
7743 |
0.4120 |
20.934 |
50.811 |
176 |
0.8290 |
7770.8 |
0.263 |
16.736 |
63.635 |
177 |
0.9150 |
8544.5 |
0.294 |
11.072 |
37.66 |
178 |
2.136 |
16697 |
0.43 |
6.559 |
15.253 |
179 |
1.492 |
13137 |
0.335 |
0.803 |
2.397 |
180 |
1.208 |
10400 |
0.32 |
13.537 |
42.303 |
181 |
1.085 |
9709.9 |
0.385 |
7.65 |
19.87 |
182 |
4.256 |
20352 |
NA |
NA |
|
183 |
0.869 |
10477 |
0.262 |
5.715 |
21.813 |
184 |
1.038 |
9432.7 |
0.311 |
4.059 |
13.051 |
185 |
3.293 |
3548.1 |
0.984 |
4.876 |
4.955 |
186 |
0.612 |
11420 |
0.306 |
60.179 |
196.66 |
187 |
1.184 |
10752 |
0.383 |
44.043 |
115 |
188 |
1.185 |
12164 |
0.421 |
3.481 |
8.268 |
189 |
1.56 |
12319 |
0.411 |
6.061 |
14.747 |
190 |
1.808 |
22825 |
0.434 |
14.176 |
32.664 |
191-1 |
2.61 |
11603 |
0.611 |
2.693 |
4.408 |
191-2 |
1.44 |
11828 |
0.361 |
1.932 |
5.352 |
192 |
0.913 |
5572.5 |
0.252 |
6.57 |
26.071 |
193 |
NA |
NA |
NA |
NA |
|
194-1 |
1.393 |
10769 |
0.683 |
222.37 |
325.57 |
194-2 |
1.503 |
10513 |
0.378 |
2.992 |
7.915 |
194-3 |
1.276 |
11481 |
0.554 |
139.14 |
251.16 |
194-4 |
1.746 |
11264 |
0.397 |
3.477 |
8.758 |
195 |
1.729 |
16700 |
0.441 |
10.448 |
23.692 |
196 |
2.08 |
25856 |
0.469 |
14.315 |
30.522 |
197 |
1.49 |
22379 |
0.589 |
8.35 |
14.177 |
[1182] The data in
Table 1 represents an average over time of each assay for each compound. For certain compounds,
multiple assays have been conducted.
[1183] All of the U.S. patents, U.S. patent application publications, U.S. patent applications,
foreign patents, foreign patent applications and non-patent publications referred
to in this specification are incorporated herein by reference, in their entirety to
the extent not inconsistent with the present description.
[1184] From the foregoing it will be appreciated that, although specific embodiments have
been described herein for purposes of illustration, various modifications may be made
without deviating from the spirit and scope of the disclosure. Accordingly, the disclosure
is not limited except as by the appended claims.
[1185] The invention also provides the following numbered embodiments:
1. A compound of formula (I):

or a pharmaceutically acceptable salt thereof, wherein
- R1
- is H or C6-10aryl, wherein C6-10aryl is optionally substituted with one to four RA1, wherein each RA1 is independently halo, C1-6alkyl, C1-4haloalkyl, cyano, -O- C1-4alkyl, or C1-4alkyl-O-C1-4alkyl;
- R2
- is H, C1-6alkyl, or C1-4haloalkyl;
- L
- is -CR3aR3b-, -C(O)-, -SO2-, -CH2-CH2-, or -N(Ra)-;
- W1
- is a bond or -CR4aR4b-;
- W2
- is -CR5aR5b-, -CR5aR5bCR5cR5d-, -CR6a=CR6b-, -N(R7)-, -O-, -S(O)n-, -C(O)-, -C(O)O- -C(O)NH-, -CR5aR5b-N(R7)-, -CR5aR5b-O-, -CR5aR5b-S(O)n-,-CR5aR5b-C(O)-, -CR5aR5b-C(O)O-, -CR5aR5b-OC(O)-, -CR5aR5b-C(O)NH-, or -CR5aR5b-NHC(O)-;
- X
- is a bond or -CR8aR8b-;
- Y
- is -C(O)NH- or Q, wherein Q is


- Z
- is -CR9aR9b-, -CR9aR9bCR9cR9d-, or -CR10a=CR10b-;
- R3a and R3b
- are independently H, C1-6alkyl, C1-4haloalkyl, or -O-C1-4alkyl; or optionally:
- R3a and R3b
- together with the carbon atom to which they are attached form a 3- to 7-membered saturated
or partially unsaturated spiro ring containing 0 to 2 heteroatoms selected from N,
O, and S, wherein the spiro ring is optionally substituted with one to three RA2, wherein each RA2 is independently halo, C1-4alkyl or C1-4haloalkyl;
- R4a and R4b
- are independently H, C1-6alkyl, C1-4haloalkyl, or halo;
- R5a, R5b, R5c, and R5d
- are independently H, C1-6alkyl, C1-4haloalkyl, halo, hydroxyl, cyano, -O-C1-4alkyl, or C1-4alkylene-O-C1-4alkyl; or optionally:
R5a and R5b or R5c and R5d together with the carbon atom to which they are attached form a 3- to 7-membered
saturated or partially unsaturated spiro ring containing 0 to 2 heteroatoms selected
from N, O, and S, wherein the spiro ring is optionally substituted with one to three
RA3, wherein each RA3 is independently halo, C1-4alkyl or C1-4haloalkyl; or
R5a and R5c or R5b and R5d together with the carbon atoms to which each is attached form a 3- to 7-membered
saturated or partially unsaturated fused ring containing 0 heteroatoms or 1 heteroatom
selected from N, O, and S, wherein the fused ring is optionally substituted with one
to three RA3, wherein each RA3 is independently halo, C1-4alkyl or C1-4haloalkyl; each R6a and R6b is independently H, halo, C1-4haloalkyl, or C1-6alkyl; optionally:
R6a and R6b together with the carbon atoms to which each is attached form a 5- to 10-membered
partially unsaturated fused ring containing 0 heteroatoms or 1 heteroatom selected
from N, O, and S, or a 5- to 10-membered fused aromatic ring, or a 5- to 10-membered
fused heteroaromatic ring containing 1 to 2 heteroatoms selected from N, O and S,
wherein the partially unsaturated fused ring, fused aromatic ring, or fused heteroaromatic
ring is optionally substituted with one to four RA4, wherein each RA4 is independently halo or C1-4alkyl;
- R7
- is H, C1-6alkyl, C1-4haloalkyl, C(O)Rc, or SO2Rc;
- R8a and R8b
- are each independently H, hydroxyl, -O-C1-4alkyl, C1-4alkylene-O-C1-4alkyl, C1-6alkyl, C1-4haloalkyl, cyano, or halo; or optionally:
R8a and R8b together with the carbon atom to which they are attached form a 3- to 7-membered
saturated or partially unsaturated spiro ring containing 0 to 2 heteroatoms selected
from N, O, and S, wherein the spiro ring is optionally substituted with one to four
RA5, wherein each RA5 is independently halo, C1-4alkyl or C1-4haloalkyl; or optionally:
R8a is H, hydroxyl, -O-C1-4alkyl, C1-4alkylene-O-C1-4alkyl, C1-6alkyl, C1-4haloalkyl, cyano, or halo; and
R8b and one of R5a, R5b, R5c, R5d, and R7 together with the atoms to which each is attached form a 3- to 7-membered saturated
or partially unsaturated fused ring containing 0 to 2 heteroatoms selected from N,
O and S, wherein the fused ring is optionally substituted with one to four RA5, wherein each RA5 is independently halo or C1-4alkyl; or
R8b and R2 together with the carbon atoms to which each is attached form a 3- to 7-membered
saturated or partially unsaturated fused ring containing 0 to 2 heteroatoms selected
from N, O and S, wherein the fused ring is optionally substituted with one to four
RA5, wherein each RA5 is independently halo or C1-4alkyl;
- R9a, R9b, R9c, and R9d
- are each independently H, C1-6alkyl, C1-4haloalkyl, or halo; or optionally:
R9a and R9b or R9c and R9d together with the carbon atom to which they are attached form a 3- to 7-membered
saturated or partially unsaturated spiro ring containing 0 to 2 heteroatoms selected
from N, O, and S, wherein the spiro ring is optionally substituted with one to three
RA6, wherein each RA6 is independently halo, C1-4alkyl or C1-4haloalkyl; or
R9a and R9c or R9b and R9d together with the carbon atoms to which each is attached form a 3- to 7-membered
saturated or partially unsaturated fused ring containing 0 heteroatoms or 1 heteroatom
selected from N, O, and S, wherein the fused ring is optionally substituted with one
to three RA6, wherein each RA6 is independently halo, C1-4alkyl, or C1-4haloalkyl; or
one of R9a, R9b, R9c, and R9d together with the atoms to which each is attached form a 3- to 7-membered saturated
or partially unsaturated fused ring containing 0 to 2 heteroatoms selected from N,
O and S, wherein the fused ring is optionally substituted with one to four RA6, wherein each RA6 is independently halo or C1-4alkyl;
- R10a and R10b
- are independently H, halo, C1-4haloalkyl, or C1-6alkyl; or optionally:
R10a and R10b together with the carbon atoms to which each is attached form a 5- to 10-membered
partially unsaturated fused ring containing 0 heteroatoms or 1 heteroatom selected
from N, O, and S, or a 5- to 10-membered fused aromatic ring, or a 5- to 10-membered
fused heteroaromatic ring containing 1 to 2 heteroatoms selected from N, O and S,
wherein the partially unsaturated fused ring, fused aromatic ring, or fused heteroaromatic
ring is optionally substituted with one to four RA7, wherein each RA7 is independently halo or C1-4alkyl;
- Ra
- is independently H, C1-6alkyl, C1-6haloalkyl, C(O)Rc, or SO2Rc;
- Rb
- is H or C1-4alkyl;
- Rc
- is C1-4alkyl or -O-C1-4alkyl; and each n is 0, 1, or 2.
2. The compound of embodiment 1, or a pharmaceutically acceptable salt thereof, wherein
R2 is selected from the group consisting of H, -CH3, -CH2CH3, and -CH2F, or R2 and R8b together with the carbon to which they are attached form a 3-membered fused carbocyclic
ring.
3. The compound of embodiment 1 or 2, or a pharmaceutically acceptable salt thereof,
wherein R2 is selected from the group consisting of H, -CH3, -CH2CH3, and -CH2F.
4. The compound of embodiment 1 or 2, or a pharmaceutically acceptable salt thereof,
wherein R2 and R8b together with the carbon to which they are attached form a 3-membered fused carbocyclic
ring.
5. The compound of embodiment 1, or a pharmaceutically acceptable salt thereof, wherein
R2 is H or C1-4alkyl.
6. The compound of embodiment 1 or 5, or a pharmaceutically acceptable salt thereof,
wherein R2 is H or methyl.
7. The compound of any one of embodiments 1-6, or a pharmaceutically acceptable salt
thereof, wherein Y is -C(O)NH-.
8. The compound of any one of embodiments 1-7, or a pharmaceutically acceptable salt
thereof, having the formula (II):

9. The compound of any one of embodiments 1-8, or a pharmaceutically acceptable salt
thereof, wherein R1 is phenyl, optionally substituted with one to four RA1, wherein each RA1 is independently halo, C1-4alkyl, C1-4haloalkyl, cyano, -O-C1-4alkyl, or C1-4alkyl-O-C1-4alkyl.
10. The compound of any one of embodiments 1-9, or a pharmaceutically acceptable salt
thereof, wherein R1 is phenyl, optionally substituted with one, two, three, or four RA1, wherein each RA1 is independently halo, C1-4alkyl, C1-4haloalkyl, or -O-C1-4alkyl.
11. The compound of any one of embodiments 1-10, or a pharmaceutically acceptable
salt thereof, wherein R1 is phenyl substituted with one, two, three, or four RA1, wherein each RA1 is independently halo or -O-C1-4alkyl.
12. The compound of any one of embodiments 1-11, or a pharmaceutically acceptable
salt thereof, wherein R1 is selected from the group consisting of



and

13. The compound of any one of embodiments 1-12, or a pharmaceutically acceptable
salt thereof, wherein R1 is selected from the group consisting of



14. The compound of any one of embodiments 1-13, or a pharmaceutically acceptable
salt thereof, wherein R1 is selected from the group consisting of


15. The compound of any one of embodiments 1-11, or a pharmaceutically acceptable
salt thereof, wherein R1 is phenyl substituted with one, two, three, or four halogens.
16. The compound of any one of embodiments 1-11 and 15, or a pharmaceutically acceptable
salt thereof, wherein R1 is phenyl substituted with two or three halogens selected from chloro and fluoro.
17. The compound of any one of embodiments 1-16, or a pharmaceutically acceptable
salt thereof, wherein R1 is selected from the group consisting of


18. The compound of any one of embodiments 1-17, or a pharmaceutically acceptable
salt thereof, wherein R1 is

19. The compound of any one of embodiments 1-18, or a pharmaceutically acceptable
salt thereof, wherein L is -CH2-, -CH(CH3)-, -C(O)-, or -CH2-CH2-.
20. The compound of any one of embodiments 1-19, or a pharmaceutically acceptable
salt thereof, having the formula:

21. The compound of any one of embodiments 1-19, or a pharmaceutically acceptable
salt thereof, having the formula (IV):

22. The compound of any one of embodiments 1-21, or a pharmaceutically acceptable
salt thereof, having the formula:


23. The compound of any one of embodiments 1-19, or a pharmaceutically acceptable
salt thereof, having the formula (VI):

24. The compound of any one of embodiments 1-19 and 23 or a pharmaceutically acceptable
salt thereof, having the formula:

25. The compound of any one of embodiments 1-24, or a pharmaceutically acceptable
salt thereof, wherein W1 is a bond or -CR4aR4b-; wherein R4a and R4b are independently H, C1-6alkyl, or halo.
26. The compound of any one of embodiments 1-25, or a pharmaceutically acceptable
salt thereof, wherein W1 is a bond or -CR4aR4b-; wherein R4a and R4b are independently H, -CH3, or halo.
27. The compound of any one of embodiments 1-26, or a pharmaceutically acceptable
salt thereof, wherein W1 is bond, -CH2-, -CF2-, -CH(F)-, -CH(CH3)-, or -CF(CH3)-.
28. The compound of any one of embodiments 1-25 and 27, or a pharmaceutically acceptable
salt thereof, wherein W1 is a bond, -CH2-, -CF2- or -CH(F)-.
29. The compound of any one of embodiments 1-28, or a pharmaceutically acceptable
salt thereof, wherein W2 is selected from the group consisting of -CR5aR5b-, - CR5aR5bCR5cR5d-, -CR6a=CR6b-, -N(R7)-, -O-, -S(O)n-, -C(O)-, -CR5aR5b-C(O)-, and -CR5aR5b-O-; wherein
each R5a, R5b, R5c, and R5d are independently H, C1-4alkyl, C1-4haloalkyl, halo, hydroxyl, cyano, -O-C1-4alkyl, or C1-4alkylene-O-C1-4alkyl; or
R5a and R5b, R5c and R5d, R5a and R5c, or R5b and R5d together with the carbon atoms to which each is attached form a 3 to 7 membered saturated
or partially unsaturated carbocyclic ring, optionally substituted with one to three
RA3, wherein each RA3 is independently halo, C1-4alkyl or C1-4haloalkyl;
each R6a and R6b are independently H, halo, C1-4haloalkyl, or C1-4alkyl; or
R6a and R6b together with the atoms to which each is attached form (i) a 5 to 10 membered fused
aromatic ring or (ii) a 5 to 10 membered fused heteroaromatic ring containing 1 to
2 heteroatoms selected from N, O and S, wherein the 5-10 membered fused aromatic ring
or the 5-10-membered fused heteroaromatic ring is optionally substituted with one
to four RA4, wherein each RA4 is independently halo or C1-4alkyl;
R7 is H, C1-4alkyl, C1-4haloalkyl, C(O)Rc, or SO2Rc;
Rc is a C1-4alkyl; and
n is 0, 1, or 2.
30. The compound of any one of embodiments 1-29, or a pharmaceutically acceptable
salt thereof, wherein W2 is selected from the group consisting of -CR5aR5b-, - CR5aR5bCR5cR5d-, -CR6a=CR6b-, -N(R7)-, -O-, -S(O)n-, -C(O)-, -CR5aR5b-C(O)-, and -CR5aR5b-O-; wherein
each R5a, R5b, R5c, and R5d are independently H, C1-4alkyl, C1-4haloalkyl, halo, hydroxyl, cyano, -O-C1-4alkyl, or C1-4alkylene-O-C1-4alkyl; or
R5a and R5b, R5c and R5d, R5a and R5c, or R5b and R5d together with the carbon atoms to which each is attached form a 3 membered carbocyclic
ring, optionally substituted with one to three RA3, wherein each RA3 is independently halo, C1-4alkyl or C1-4haloalkyl;
each R6a and R6b are independently H, halo, C1-4haloalkyl, or C1-4alkyl; or
R6a and R6b together with the atoms to which each is attached form (i) a fused phenyl ring or
(ii) a 5-6 membered fused heteroaromatic ring containing 1 to 2 heteroatoms selected
from N, O and S, wherein the fused phenyl ring or the 5-6 membered fused heteroaromatic
ring is optionally substituted with one to four RA4, wherein each RA4 is independently halo or C1-4alkyl;
R7 is H, C1-4alkyl, C1-4haloalkyl, C(O)Rc, or SO2Rc;
Rc is a C1-4alkyl; and
n is 0, 1, or 2.
31. The compound of any one of embodiments 1-30, or a pharmaceutically acceptable
salt thereof, wherein W2 is selected from the group consisting of -CR5aR5b-, - CR5aR5bCR5cR5d-, -CR6a=CR6b-, -N(R7)-, -O-, -S(O)n-, -C(O)-, -CR5aR5b-C(O)-, and -CR5aR5b-O-; wherein
each R5a, R5b, R5c, and R5d are independently H, C1-4alkyl, halo, hydroxyl, or - O-C1-4alkyl; or
R5a and R5b, R5c and R5d, R5a and R5c, or R5b and R5d together with the carbon atoms to which each is attached form a 3-membered carbocyclic
ring;
each R6a and R6b are independently H, halo, or C1-4alkyl; or
R6a and R6b together with the atoms to which each is attached form (i) a fused phenyl ring or
(ii) a 5-6 membered fused heteroaromatic ring containing 1 to 2 heteroatoms selected
from N and O, wherein the fused phenyl ring or the 5-6 membered fused heteroaromatic
ring is optionally substituted with one or two RA4, wherein each RA4 is independently halo or C1-4alkyl;
R7 is H, C1-4alkyl, C1-4haloalkyl, C(O)Rc, or SO2Rc;
Rc is a C1-4alkyl; and
n is 0 or 1.
32. The compound of any one of embodiments 1-31, or a pharmaceutically acceptable
salt thereof, wherein W2 is selected from the group consisting of -CR5aR5b-, - CR5aR5bCR5cR5d-, -CR6a=CR6b-, -N(R7)-, -O-, -S(O)n-, -C(O)-, -CR5aR5b-C(O)-, and -CR5aR5b-O-; wherein
each R5a, R5b, R5c, and R5d are independently H, -CH3, halo, hydroxyl, or - OCH3; or
R5a and R5b, R5c and R5d, R5a and R5c, or R5b and R5d together with the carbon atoms to which each is attached form a 3-membered carbocyclic
ring;
each R6a and R6b are independently H, halo, or CH3; or
R6a and R6b together with the atoms to which each is attached form (i) a fused phenyl ring or
(ii) a 5 membered fused heteroaromatic ring containing 1 to 2 heteroatoms selected
from N and O, wherein the fused phenyl ring or the 5 membered fused heteroaromatic
ring is optionally substituted with one or two RA4, wherein each RA4 is independently halo or CH3;
R7 is H, -CH3, -CH(CH3)2, -CF3, -C(O)Rc, or -SO2Rc;
Rc is -CH3; and
n is 0 or 1.
33. The compound of any one of embodiments 1-32, or a pharmaceutically acceptable
salt thereof, wherein W2 is selected from the group consisting of -CR5aR5b-, - CR5aR5bCR5cR5d-, -CR6a=CR6b-, -N(R7)-, -O-, -S(O)n-, -C(O)-, -CR5aR5b-C(O)-, and -CR5aR5b-O-; wherein
each R5a, R5b, R5c, and R5d are independently H, -CH3, halo, hydroxyl, or - OCH3;
each R6a and R6b are independently H, halo, or -CH3;
R7 is H, -CH3, -CH(CH3)2, -CF3, -C(O)Rc, or -SO2Rc;
Rc is -CH3; and
n is 0 or 1.
34. The compound of any one of embodiments 1-33, or a pharmaceutically acceptable
salt thereof, wherein W2 is -CH2-, -CH2CH2-, -CH=CH-,

-NH-, - N(CH3)-, -N(CH(CH3)2)-, -N(C(O)CH3)-, -N(SO2CH3)-, -O-, or -CH2-O-.
35. The compound of any one of embodiments 1-34, or a pharmaceutically acceptable
salt thereof, wherein X is -CH2-, -CF2-, -CH(F)-, -CH(OH)-, -CH(CH3)-, - CH(CH2F)- or -CF(CH3)-.
36. The compound of any one of embodiments 1-34, or a pharmaceutically acceptable
salt thereof, wherein X is -CH2-, -CF2-, -CH(F)-, -CH(OH)-, -CH(CH3) or -CF(CH3)-.
37. The compound of any one of embodiments 1-34, or a pharmaceutically acceptable
salt thereof, wherein X is a bond or -CR8aR8b-, wherein R8a and R8b are independently H, hydroxyl, -O-C1-4alkyl, C1-4alkyl, C1-4haloalkyl, or halo; or
R8a and R8b together with the carbon to which they are attached form a 3 to 5-membered saturated
spiro ring containing 0 to 2 heteroatoms selected from N, O, and S, wherein the spiro
ring is optionally substituted with one to four RA5, wherein each RA5 is independently halo, C1-4alkyl or C1-4haloalkyl.
38. The compound of any one of embodiments 1-37, or a pharmaceutically acceptable
salt thereof, wherein X is a bond or -CR8aR8b-, wherein R8a and R8b are independently H, hydroxyl, -O-C1-4alkyl, C1-4alkyl, C1-4haloalkyl, or halo; or
R8a and R8b together with the carbon to which they are attached form a 3-5 membered saturated
spiro carbocyclic ring, wherein the a 3-5 membered saturated spiro carbocyclic ring
is optionally substituted with one to four RA5, wherein each RA5 is independently halo, C1-4alkyl or C1-4haloalkyl.
39. The compound of any one of embodiments 1-38, or a pharmaceutically acceptable
salt thereof, wherein X is a bond or -CR8aR8b-, wherein R8a and R8b are independently H, hydroxyl, -O-C1-4alkyl, C1-4alkyl, C1-4haloalkyl, or halo, or
R8a and R8b together with the carbon to which they are attached form a 3-membered saturated spiro
carbocyclic ring.
40. The compound of any one of embodiments 1-39 or a pharmaceutically acceptable salt
thereof, wherein X is a bond, -CH2-, -CF2-, -CH(F)-, -CH(Cl)-, -CH(OH)-, - C(CH2F)(H)-, -C(CH2F)(OH)-, -C(CH3)(OH)-, -CH(OCH3)-, - C(CH2CH3)(OCH3)-, -C(CH2CH3)(OH)-, -CH(CH3)-, -CH(CH2CH3)-, -CF(CH3)-, -CF(CH2CH3)-, or -CR8aR8b-, wherein R8a and R8b together with the carbon to which they are attached form an spiro cyclopropane ring.
41. The compound of any one of embodiments 1-40, or a pharmaceutically acceptable
salt thereof, wherein X is a bond, -CH2-, -CF2-, -CH(F)-, -CH(Cl)-, -CH(OH)-, - C(CH2F)(H)-, -C(CH2F)(OH)-, -C(CH3)(OH)-, -CH(OCH3)-, - C(CH2CH3)(OCH3)-, -C(CH2CH3)(OH)-, -CH(CH3)-, -CH(CH2CH3)-, -CF(CH3)-, or -CF(CH2CH3)-.
42. The compound of any one of embodiments 1-41 or a pharmaceutically acceptable salt
thereof, wherein X is a bond, -CH2-, -CF2-, -CH(F)-, -CH(Cl)-, -CH(OH)-, - C(CH2F)(OH)-, -C(CH3)(OH)-, -CH(OCH3)-, -C(CH2CH3)(OCH3)-, - C(CH2CH3)(OH)-, -CH(CH3)-, -CH(CH2CH3)-, -CF(CH3)-, -CF(CH2CH3)-, or-CR8aR8b-, wherein R8a and R8b together with the carbon to which they are attached form an spiro cyclopropane ring.
43. The compound of any one of embodiments 1-42, or a pharmaceutically acceptable
salt thereof, wherein X is a bond, -CH2-, -CF2-, -CH(F)-, -CH(Cl)-, -CH(OH)-, - C(CH2F)(OH)-, -C(CH3)(OH)-, -CH(OCH3)-, -C(CH2CH3)(OCH3)-, - C(CH2CH3)(OH)-, -CH(CH3)-, -CH(CH2CH3)-, -CF(CH3)-, or -CF(CH2CH3)-.
44. The compound of any one of embodiments 1-37, or a pharmaceutically acceptable
salt thereof, wherein X is -CR8aR8b-, wherein R8a and R8b together with the carbon to which they are attached form a 3 to 5-membered saturated
spiro ring containing 0 to 2 heteroatoms selected from N, O, and S, wherein the spiro
ring is optionally substituted with one to four RA5, wherein each RA5 is independently halo, C1-4alkyl or C1-4haloalky.
45. The compound of any one of embodiments 1-38 and 44, or the pharmaceutically acceptable
salt thereof, wherein X is -CR8aR8b-, wherein R8a and R8b together with the carbon to which they are attached form a 3-5 membered saturated
spiro carbocyclic ring, wherein the a 3-5 membered saturated spiro carbocyclic ring
optionally substituted with one to four RA5, wherein each RA5 is independently halo, C1-4alkyl or C1-4haloalkyl.
46. The compound of any one of embodiments 1-39, 44, and 45, or the pharmaceutically
acceptable salt thereof, wherein X is -CR8aR8b-, wherein R8a and R8b together with the carbon to which they are attached form a 3-membered spiro carbocyclic
ring.
47. The compound of any one of embodiments 1-19 or a pharmaceutically acceptable salt
thereof, having the formula (VIII):

48. The compound of any one of embodiments 1-47, or a pharmaceutically acceptable
salt thereof, wherein Z is -CR9aR9b-, -CR9aR9bCR9cR9d-, or -CR10a=CR10b-; wherein
R9a, R9b, R9c, and R9d are each independently H, C1-6alkyl, C1-4haloalkyl, or halo; or
R9a and R9b or R9c and R9d together with the carbon atom to which they are attached form a 3 to 7 membered saturated
or partially unsaturated ring containing 0 to 2 heteroatoms selected from N, O, and
S, wherein the spiro ring is optionally substituted with one to three RA6, wherein each RA6 is independently halo, C1-4alkyl or C1-4haloalkyl;
R10a and R10b are independently H, halo, C1-4haloalkyl, or C1-6alkyl; or
R10a and R10b together with the carbon atoms to which each is attached form (i) a 5-10 membered
partially unsaturated fused ring containing 0 heteroatoms or 1 heteroatom selected
from N, O, and S, (ii) a 5-10 membered fused aromatic ring, or (iii) a 5-10 membered
fused heteroaromatic ring containing 1 to 2 heteroatoms selected from N, O and S,
wherein the 5-10 membered partially unsaturated fused ring, 5-10 membered fused aromatic
ring, or 5-10 membered fused heteroaromatic ring is optionally substituted with one
to four RA7, wherein each RA7 is independently halo or C1-4alkyl.
49. The compound of any one of embodiments 1-48, or a pharmaceutically acceptable
salt thereof, wherein Z is -CR9aR9b-, -CR9aR9bCR9cR9d-, or -CR10a=CR10b-; wherein R9a, R9b, R9c, and R9d are each independently H, C1-6alkyl, C1-4haloalkyl, or halo; or
R9a and R9b or R9c and R9d together with the carbon atom to which they are attached form a 3-membered saturated
spiro carbocyclic ring;
R10a and R10b are independently H, halo, C1-4haloalkyl, or C1-6alkyl; or
R10a and R10b together with the carbon atoms to which each is attached form (i) a fused phenyl
ring or (ii) a 5-6 membered fused heteroaromatic ring containing 1 to 2 heteroatoms
selected from N, O and S, wherein the fused phenyl ring or the fused heteroaromatic
ring is optionally substituted with one to two RA7, wherein each RA7 is independently halo or C1-4alkyl.
50. The compound of any one of embodiments 1-49, or a pharmaceutically acceptable
salt thereof, wherein Z is -CR9aR9b-, -CR9aR9bCR9cR9d-, or -CR10a=CR10b-; wherein
R9a, R9b, R9c, and R9d are each independently H, CH3, CH2CH3, CHF2, or halo; or
R9a and R9b or R9c and R9d together with the carbon atom to which they are attached form a 3-membered carbocyclic
ring;
R10a and R10b are independently H, halo, or CH3; or
R10a and R10b together with the carbon atoms to which each is attached form (i) a fused phenyl
ring or (ii) a 5-6 membered fused heteroaromatic ring containing 1 to 2 heteroatoms
selected from N, O and S, wherein the fused phenyl ring or the fused heteroaromatic
ring is optionally substituted with one to two RA7, wherein each RA7 is independently halo or CH3.
51. The compound of any one of embodiments 1-50 or a pharmaceutically acceptable salt
thereof, wherein Z is -CH2-, -CH(CH3)-, -CH2-CH2-,


52. The compound of any one of embodiments 1-51, wherein the compound has a formula
(IX):

or a pharmaceutically acceptable salt thereof.
53. The compound of any one of embodiments 1-52, wherein the compound has a formula
(IXa):

or a pharmaceutically acceptable salt thereof.
54. The compound of any one of embodiments 1-52, wherein the compound has a formula
(IXb):

or a pharmaceutically acceptable salt thereof.
55. The compound of any one of embodiments 1-19 or a pharmaceutically acceptable salt
thereof, wherein the compound has a Formula (X):

56. The compound of any one of embodiments 1-19 and 55, or a pharmaceutically acceptable
salt thereof, wherein the compound has a Formula (Xa):

57. The compound of any one of embodiments 1-19 and 55, or a pharmaceutically acceptable
salt thereof, wherein the compound has a Formula (Xb):

58. The compound of any one of embodiments 55-57, wherein X is bond or -CR8aR8b-; wherein R8a and R8b are each independently H, hydroxyl, -O-C1-4alkyl, C1-4alkylene-O-C1-4alkyl, C1-6alkyl, C1-4haloalkyl, cyano, or halo.
59. The compound of any one of embodiments 55-58, wherein X is bond.
60. The compound of any one of embodiments 55-58, wherein X is-CR8aR8b-; wherein R8a and R8b are each independently H, hydroxyl, -O-C1-4alkyl, C1-4alkylene-O-C1-4alkyl, C1-6alkyl, C1-4haloalkyl, cyano, or halo.
61. The compound of any one of embodiments 55-58 and 60, wherein X is-CR8aR8b-; wherein R8a and R8b are each independently H, C1-6alkyl, C1-4haloalkyl, or halo.
62. The compound of any one of embodiments 55-58, 60, and 61, wherein R8a and R8b are each independently H, -CH3, -CHF2, -CH2F, or halo.
63. The compound of any one of embodiments 55-62, wherein Z is -CR9aR9b- or - CR9aR9bCR9cR9d; wherein R9a, R9b, R9c, and R9d are each independently H, C1-6alkyl, or C1-4haloalkyl.
64. The compound of any one of embodiments 55-63, wherein Z is -CR9aR9b-.
65. The compound of any one of embodiments 55-63, wherein Z is -CR9aR9bCR9cR9d-.
66. The compound of any one of embodiments 55-65, wherein R9a, R9b, R9c, and R9d are each independently H, -CH3, -CHF2, or -CH2F.
67. The compound of any one of embodiments 55-66, wherein each R5a, R5b, R5c, and R5d is independently H, halo, C1-4haloalkyl, or C1-6alkyl.
68. The compound of any one of embodiments 1-19 or a pharmaceutically acceptable salt
thereof, wherein the compound has a Formula (XI):

69. The compound of any one of embodiments 1-19 and 68, or a pharmaceutically acceptable
salt thereof, wherein the compound has a Formula (XIa):


70. The compound of any one of embodiments 1-19 and 68, or a pharmaceutically acceptable
salt thereof, wherein the compound has a Formula (XIb):

71. The compound of any one of embodiments 68-70, wherein X is bond or -CR8aR8b-; wherein R8a and R8b are each independently H, hydroxyl, -O-C1-4alkyl, C1-4alkylene-O-C1-4alkyl, C1-6alkyl, C1-4haloalkyl, cyano, or halo.
72. The compound of any one of embodiments 68-71, wherein X is bond.
73. The compound of any one of embodiments 68-71, wherein X is-CR8aR8b-; wherein R8a and R8b are each independently H, hydroxyl, -O-C1-4alkyl, C1-4alkylene-O-C1-4alkyl, C1-6alkyl, C1-4haloalkyl, cyano, or halo.
74. The compound of any one of embodiments 68-71 and 73, wherein X is-CR8aR8b-; wherein R8a and R8b are each independently H, C1-6alkyl, C1-4haloalkyl, or halo.
75. The compound of any one of embodiments 68-71, 73, and 74, wherein R8a and R8b are each independently H, -CH3, -CHF2, -CH2F, or halo.
76. The compound of any one of embodiments 68-75, wherein Z is -CR9aR9b- or - CR9aR9bCR9cR9d; wherein R9a, R9b, R9c, and R9d are each independently H, C1-6alkyl, or C1-4haloalkyl.
77. The compound of any one of embodiments 68-76, wherein Z is -CR9aR9b-.
78. The compound of any one of embodiments 68-76, wherein Z is -CR9aR9bCR9cR9d-.
79. The compound of any one of embodiments 68-78, wherein R9a, R9b, R9c, and R9d are each independently H, -CH3, -CHF2, or -CH2F.
80. The compound of any one of embodiments 68-79, wherein each R6a and R6b is independently H, halo, C1-4haloalkyl, or C1-6alkyl.
81. A compound having the formula













or a pharmaceutically acceptable salt thereof.
82. A compound having the formula




















or a pharmaceutically acceptable salt thereof.
83. A compound selected from the group consisting of:
































































and

or a pharmaceutically acceptable salt thereof.
84. A compound selected from the group consisting of:




































































































or a pharmaceutically acceptable salt thereof.
85. A compound selected from the group consisting of:











or a pharmaceutically acceptable salt thereof.
86. A compound selected from the group consisting of:

















and

or a pharmaceutically acceptable salt thereof.
87. A pharmaceutical composition comprising a therapeutically effective amount of
a compound of any one of embodiments 1-86, or pharmaceutically acceptable salt thereof,
and a pharmaceutically acceptable excipient.
88. The pharmaceutical composition of embodiment 87, further comprising one, two,
three, or four additional therapeutic agents.
89. The pharmaceutical composition of embodiment 88, wherein the additional therapeutic
agent or agents are anti-HIV agents.
90. The pharmaceutical composition of embodiment 87 or 88, wherein the additional
therapeutic agent or agents are HIV protease inhibitors, HIV non-nucleoside or non-nucleotide
inhibitors of reverse transcriptase, HIV nucleoside or nucleotide inhibitors of reverse
transcriptase, HIV capsid inhibitors, gp41 inhibitors, CXCR4 inhibitors, gp120 inhibitors,
CCR5 inhibitors, latency reversing agents, capsid polymerization inhibitors, HIV bNAbs,
TLR7 agonists, pharmacokinetic enhancers, other drugs for treating HIV, or combinations
thereof.
91. The pharmaceutical composition of any one of embodiments 87-90, wherein the additional
therapeutic agent or agents are abacavir, tenofovir alafenamide, tenofovir disoproxil,
N-((S)-l-(3-(4-chloro-3-(methylsulfonamido)-l-(2,2,2-trifluoroethyl)-lH-indazol-7-yl)-6-(3-methyl-3-(methylsulfonyl)but-l-yn-l-yl)pyridin-2-yl)-2-(3,5-difluorophenyl)ethyl)-2-((3bS,4aR)-5,5-difluoro-3-(trifluoromethyl)-3b,4,4a,5-tetrahydro-lH-cyclopropa[3,4]cyclopenta[l,2-c]pyrazol-l-yl)acetamide, or a pharmaceutically acceptable salt thereof.
92. The pharmaceutical composition of any one of embodiments 87-91, wherein the pharmaceutical
composition is for oral or parenteral administration.
93. A kit comprising a compound of any one of embodiments 1-86, or a pharmaceutically
acceptable salt thereof, and instructions for use.
94. The kit of embodiment 93, further comprising one, two, three, or four additional
therapeutic agent or agents.
95. The kit of embodiment 93 or 94, wherein the additional therapeutic agent or agents
are anti-HIV agents.
96. The kit of any one of embodiments 93-95, wherein the additional therapeutic agent
or agents are HIV protease inhibitors, HIV non-nucleoside or non-nucleotide inhibitors
of reverse transcriptase, HIV nucleoside or nucleotide inhibitors of reverse transcriptase,
HIV capsid inhibitors, gp41 inhibitors, CXCR4 inhibitors, gp120 inhibitors, CCR5 inhibitors,
latency reversing agents, capsid polymerization inhibitors, HIV bNAbs, TLR7 agonists,
pharmacokinetic enhancers, other drugs for treating HIV, or combinations thereof.
97. The kit of any one of embodiments 93-96, wherein the additional therapeutic agent
or agents are abacavir, tenofovir alafenamide, tenofovir disoproxil, N-((S)-l-(3-(4-chloro-3-(methylsulfonamido)-l-(2,2,2-trifluoroethyl)-lH-indazol-7-yl)-6-(3-methyl-3-(methylsulfonyl)but-l-yn-l-yl)pyridin-2-yl)-2-(3,5-difluorophenyl)ethyl)-2-((3bS,4aR)-5,5-difluoro-3-(trifluoromethyl)-3b,4,4a,5-tetrahydro-lH-cyclopropa[3,4]cyclopenta[l,2-c]pyrazol-l-yl)acetamide, or a pharmaceutically acceptable salt thereof.
98. A method of treating an HIV infection in a human having or at risk of having the
infection, comprising administering to the human a therapeutically effective amount
of a compound of any one of embodiments 1-86 or pharmaceutically acceptable salt thereof,
or a pharmaceutical composition of any one of embodiments 87-92.
99. The method of embodiment 98, further comprising administering to the human a therapeutically
effective amount of one, two, three, or four additional therapeutic agents.
100. The method of embodiment 99, wherein the additional therapeutic agent or agents
are anti-HIV agents.
101. The method of embodiment 99 or 100, wherein the additional therapeutic agent
or agents are HIV protease inhibitors, HIV non-nucleoside or non-nucleotide inhibitors
of reverse transcriptase, HIV nucleoside or nucleotide inhibitors of reverse transcriptase,
HIV capsid inhibitors, gp41 inhibitors, CXCR4 inhibitors, gp120 inhibitors, CCR5 inhibitors,
latency reversing agents, capsid polymerization inhibitors, HIV bNAbs, TLR7 agonists,
pharmacokinetic enhancers, other drugs for treating HIV, or combinations thereof.
102. The method of any one of embodiments 99-101, wherein the additional therapeutic
agent or agents are abacavir, tenofovir alafenamide, tenofovir disoproxil, N-((S)-l-(3-(4-chloro-3-(methylsulfonamido)-l-(2,2,2-trifluoroethyl)-lH-indazol-7-yl)-6-(3-methyl-3-(methylsulfonyl)but-l-yn-l-yl)pyridin-2-yl)-2-(3,5-difluorophenyl)ethyl)-2-((3bS,4aR)-5,5-difluoro-3-(trifluoromethy1)-3b,4,4a,5-tetrahydro-lH-cyclopropa[3,4]cyclopenta[l,2-c]pyrazol-l-yl)acetamide, or a pharmaceutically acceptable salt thereof.
103. The method of any one of embodiments 98-102, wherein the administration is oral,
intravenous, subcutaneous, or intramuscular.
104. Use of a compound of any one of embodiments 1-86, or pharmaceutically acceptable
salt thereof, or a pharmaceutical composition of any one of embodiments 87-92, for
treating an HIV infection in a human having or at risk of having the infection.
105. A compound of any one of embodiments 1-86, or pharmaceutically acceptable salt
thereof, or a pharmaceutical composition of any one of embodiments 87-92, for use
in medical therapy.
106. A compound of any one of embodiments 1-86, or pharmaceutically acceptable salt
thereof, or a pharmaceutical composition of any one of embodiments 87-92, for use
in treating an HIV infection.
107. Use of a compound of any one of embodiments 1-86, or pharmaceutically acceptable
salt thereof, or a pharmaceutical composition of any one of embodiments 87-92, in
the manufacture of a medicament for treating an HIV infection in a human having or
at risk of having the infection.